[1] "Fri Apr 24 15:20:42 2026" [1] "Analyzing 260203a" [1] "Reading in raw Picarro user data files" [1] "CFKBDS2303-20260203-010724Z-DataLog_User.dat" Read 5437 records [1] "CFKBDS2303-20260203-020729Z-DataLog_User.dat" Read 5520 records [1] "CFKBDS2303-20260203-030735Z-DataLog_User.dat" Read 5572 records [1] "CFKBDS2303-20260203-040740Z-DataLog_User.dat" Read 5550 records [1] "CFKBDS2303-20260203-050744Z-DataLog_User.dat" Read 5550 records [1] "CFKBDS2303-20260203-060750Z-DataLog_User.dat" Read 5560 records [1] "CFKBDS2303-20260203-070756Z-DataLog_User.dat" Read 5586 records [1] "CFKBDS2303-20260203-080759Z-DataLog_User.dat" Read 5583 records [1] "CFKBDS2303-20260203-090805Z-DataLog_User.dat" Read 5064 records [1] "Converting time stamp" [1] "Median sample interval = 2.59 secs" [1] "Median CO2 sample interval = 0.25 seconds" [1] "Median CH4 sample interval = 0.44 seconds" [1] "Median CO sample interval = 1.05 seconds" [1] "Median H2O sample interval = 0.85 seconds" [1] "Reading in raw Picarro sensor data files" [1] "CFKBDS2303-20260203-003045Z-DataLog_User_Sensors.dat" Read 1160 records [1] "CFKBDS2303-20260203-013052Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-023057Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-033102Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-043107Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-053112Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-063117Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-073122Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-083127Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260203-093132Z-DataLog_User_Sensors.dat" Read 374 records [1] "Converting time stamp" [1] "Reading in interpolated AMPS data" [1] "Reading in interpolated MERRA-2 data" [1] "Reading int file: 260203a.int" [1] "Writing processed int output file: 260203a.int_out" [1] "Removing any manually screened data" [1] "Removed all data from 2 rows, keeping only period: 2026-02-03 01:07:20 to 2026-02-03 10:02:31" [1] "Comparing to GPS time" [1] "Median time offset (Picarro - GPS) = 6.5 seconds" [1] "Range:" [1] 6.06 7.94 [1] "Setting nonlocalfilt" [1] "Applying inlet lag" [1] 135.3867 [1] "Median tlag offset from predicted:" [1] 0.1779345 [1] "at high alt:" [1] 0.2071247 [1] 248.6611 [1] "at low alt:" [1] -0.2844399 [1] 758.5719 [1] "Range of tlag:" [1] 21.86940 59.05202 0% 25% 50% 75% 100% 21.86940 23.40924 26.72057 31.10652 59.05202 [1] "Applying cavity pressure and ambient pressure corrections" [1] "Cavity pressure correction applied (co2, ch4, co, h2o coeffs):" [1] 0.47 8.10 0.00 0.00 [1] "Cabin pressure correction applied (co2, ch4, co, h2o coeffs):" [1] 0 0 0 0 [1] "Finding cal and sample periods" [1] "Plotting specified intervals" startchar endchar startdt 1 2026-02-03 01:07:20 2026-02-03 10:02:31 2026-02-03 01:07:20 enddt flag label 1 2026-02-03 10:02:31 all all [1] "Plotting all variables for period:" startchar endchar startdt 1 2026-02-03 01:07:20 2026-02-03 10:02:31 2026-02-03 01:07:20 enddt flag label 1 2026-02-03 10:02:31 all all [1] "Plotting SDs of selected variables for period:" startchar endchar startdt 1 2026-02-03 01:07:20 2026-02-03 10:02:31 2026-02-03 01:07:20 enddt flag label 1 2026-02-03 10:02:31 all all [1] "Plotting Deltas of selected variables for period:" startchar endchar startdt 1 2026-02-03 01:07:20 2026-02-03 10:02:31 2026-02-03 01:07:20 enddt flag label 1 2026-02-03 10:02:31 all all [1] "co2dry_prescreen 0" [1] "ch4dry_prescreen 0" [1] "cmon_prescreen 0" [1] "h2o_prescreen 0" [1] "cavp 0.1" [1] "ambp 0" [1] "cavt 43.8" [1] "boxt 47.7" [1] "dast 69.2" [1] "etalont 49.7" [1] "flow1 2.3" [1] "inletvlv 0" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "Plotting all variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "Plotting SDs of selected variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "Plotting Deltas of selected variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "co2dry_prescreen 0" [1] "ch4dry_prescreen 0" [1] "cmon_prescreen 0" [1] "h2o_prescreen 0" [1] "cavp 0.1" [1] "ambp 0" [1] "cavt 43.8" [1] "boxt 47.7" [1] "dast 69.2" [1] "etalont 49.7" [1] "flow1 2.3" [1] "inletvlv 0" [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "Plotting profiles of concentration variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "Plotting inlet lag estimate" [1] "Plotting timeseries of interpolated AMPS variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight [1] "Plotting timeseries of interpolated MERRA-2 variables for period:" startchar endchar startdt 2 2026-02-03 02:00:58 2026-02-03 09:42:23 2026-02-03 02:00:58 enddt flag label 2 2026-02-03 09:42:23 flight flight startchar endchar startdt 3 2026-02-03 00:30:45 2026-02-03 01:15:45 2026-02-03 00:30:45 enddt flag label 3 2026-02-03 01:15:45 warmup warmup [1] "Plotting warmup variables for period:" startchar endchar startdt 3 2026-02-03 00:30:45 2026-02-03 01:15:45 2026-02-03 00:30:45 enddt flag label 3 2026-02-03 01:15:45 warmup warmup startchar endchar startdt 4 2026-02-03 02:00:58 2026-02-03 03:14:28 2026-02-03 02:00:58 enddt flag label 4 2026-02-03 03:14:28 prof MCMdep [1] "Plotting profiles of concentration variables for period:" startchar endchar startdt 4 2026-02-03 02:00:58 2026-02-03 03:14:28 2026-02-03 02:00:58 enddt flag label 4 2026-02-03 03:14:28 prof MCMdep startchar endchar startdt 5 2026-02-03 02:00:58 2026-02-03 03:14:28 2026-02-03 02:00:58 enddt flag label 5 2026-02-03 03:14:28 tser MCMdep [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 5 2026-02-03 02:00:58 2026-02-03 03:14:28 2026-02-03 02:00:58 enddt flag label 5 2026-02-03 03:14:28 tser MCMdep startchar endchar startdt 6 2026-02-03 08:52:36 2026-02-03 09:42:23 2026-02-03 08:52:36 enddt flag label 6 2026-02-03 09:42:23 prof CHCarr [1] "Plotting profiles of concentration variables for period:" startchar endchar startdt 6 2026-02-03 08:52:36 2026-02-03 09:42:23 2026-02-03 08:52:36 enddt flag label 6 2026-02-03 09:42:23 prof CHCarr startchar endchar startdt 7 2026-02-03 08:52:36 2026-02-03 09:42:23 2026-02-03 08:52:36 enddt flag label 7 2026-02-03 09:42:23 tser CHCarr [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 7 2026-02-03 08:52:36 2026-02-03 09:42:23 2026-02-03 08:52:36 enddt flag label 7 2026-02-03 09:42:23 tser CHCarr startchar endchar startdt 8 2026-02-03 02:00:58 2026-02-03 02:05:00 2026-02-03 02:00:58 enddt flag label 8 2026-02-03 02:05:00 ch4plume [1] "Reading in Raw file: ElijahTallTower_01_2026.dat" [1] "Reading in Raw file: ElijahTallTower_02_2026.dat" [1] "Reading in Raw file: ElijahTallTower_11_2025.dat" [1] "Reading in Raw file: ElijahTallTower_12_2025.dat" [1] "Reading in Raw file: Linda_01_2026.dat" [1] "Reading in Raw file: Linda_02_2026.dat" [1] "Reading in Raw file: Lorne_01_2026.dat" [1] "Reading in Raw file: Lorne_02_2026.dat" [1] "Reading in Raw file: MarblePointII_01_2026.dat" [1] "Reading in Raw file: MarblePointII_02_2026.dat" [1] "Reading in Raw file: MinnaBluff_01_2026.dat" [1] "Reading in Raw file: MinnaBluff_02_2026.dat" [1] "Reading in Raw file: Phoenix_01_2026.dat" [1] "Reading in Raw file: Phoenix_02_2026.dat" [1] "Reading in Raw file: Sarah.20251121.txt" [1] "Reading in Raw file: Sarah.20251122.txt" [1] "Reading in Raw file: Sarah.20251127.txt" [1] "Reading in Raw file: Sarah.20251128.txt" [1] "Reading in Raw file: Sarah.20251130.txt" [1] "Reading in Raw file: Sarah.20251201.txt" [1] "Reading in Raw file: Sarah.20251203.txt" [1] "Reading in Raw file: Sarah.20251209.txt" [1] "Reading in Raw file: Sarah.20251210.txt" [1] "Reading in Raw file: Sarah.20251211.txt" [1] "Reading in Raw file: Sarah.20251212.txt" [1] "Reading in Raw file: Sarah.20251214.txt" [1] "Reading in Raw file: Sarah.20251215.txt" [1] "Reading in Raw file: Sarah.20251218.txt" [1] "Reading in Raw file: Sarah.20251219.txt" [1] "Reading in Raw file: Sarah.20251222.txt" [1] "Reading in Raw file: Sarah.20251223.txt" [1] "Reading in Raw file: Sarah.20251228.txt" [1] "Reading in Raw file: Sarah.20260108.txt" [1] "Reading in Raw file: Sarah.20260113.txt" [1] "Reading in Raw file: Sarah.20260116.txt" [1] "Reading in Raw file: Sarah.20260120.txt" [1] "Reading in Raw file: Sarah.20260203.txt" [1] "Reading in Raw file: WhiteIsland_01_2026.dat" [1] "Reading in Raw file: WhiteIsland_02_2026.dat" [1] "Reading in Raw file: WindlessBight_01_2026.dat" [1] "Reading in Raw file: WindlessBight_02_2026.dat" [1] "Reading in 3 ESNZ files" [1] -2.4798270246 2.3831194794 2.3393427780 -3.0740909678 0.0007842673 [6] -2.3363203314 -1.8110990950 6.0725306406 -2.9606118884 -8.9388391093 [11] -4.5673698909 [1] -4.6636249917 5.4946124211 6.8365247880 4.4525677120 0.0006193793 [6] -2.8156853561 -3.8610237625 4.1022735691 -1.3465446493 -0.9454544189 [11] -5.5533128513 [1] 5.2819447305 5.9891588817 7.2256899885 5.4106741270 0.0009993528 [6] 3.6587534374 4.2646904257 7.3283201906 3.2524460405 8.9887000551 [11] 7.1902817291 [1] 28.00128 203.44731 198.89008 145.37847 231.69990 39.68426 25.12997 [8] 235.95917 65.54302 83.96232 39.43588 [1] "ElijahTallTower" "Linda" "Lorne" "MarblePointII" [5] "MinnaBluff" "Phoenix" "Sarah" "WhiteIsland" [9] "WindlessBight" "Arrival Heights" "Scott Base 2" startchar endchar startdt 9 2026-02-03 02:00:58 2026-02-03 02:05:00 2026-02-03 02:00:58 enddt flag label 9 2026-02-03 02:05:00 tser ch4plume [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 9 2026-02-03 02:00:58 2026-02-03 02:05:00 2026-02-03 02:00:58 enddt flag label 9 2026-02-03 02:05:00 tser ch4plume [1] "260203a_all_all_1.png" [2] "260203a_all_all_2.png" [3] "260203a_all_SDs.png" [4] "260203a_all_Deltas.png" [5] "260203a_flight_flight_1.png" [6] "260203a_flight_flight_2.png" [7] "260203a_flight_SDs.png" [8] "260203a_flight_Deltas.png" [9] "260203a_flight_timeseries.png" [10] "260203a_flight_profile.png" [11] "260203a_flight_AMPS_timeseries.png" [12] "260203a_flight_MERRA2_timeseries.png" [13] "260203a_MCMdep_profile.png" [14] "260203a_MCMdep_timeseries.png" [15] "260203a_CHCarr_profile.png" [16] "260203a_CHCarr_timeseries.png" [17] "260203a_map_ch4plume.png" [18] "260203a_ch4plume_timeseries.png" [1] "Making flight html" [1] "Making index html" [1] "Outputting data files" Warning message: In regularize.values(x, y, ties, missing(ties), na.rm = na.rm) : collapsing to unique 'x' values