[1] "Mon Feb  9 15:09:48 2026"
[1] "Analyzing  260126a"
[1] "Reading in raw Picarro user data files"
[1] "CFKBDS2303-20260126-031550Z-DataLog_User.dat"
Read 1709 records
[1] "CFKBDS2303-20260126-052304Z-DataLog_User.dat"
Read 5436 records
[1] "CFKBDS2303-20260126-062310Z-DataLog_User.dat"
Read 5470 records
[1] "CFKBDS2303-20260126-072315Z-DataLog_User.dat"
Read 5501 records
[1] "CFKBDS2303-20260126-082320Z-DataLog_User.dat"
Read 5522 records
[1] "CFKBDS2303-20260126-092326Z-DataLog_User.dat"
Read 5558 records
[1] "CFKBDS2303-20260126-102331Z-DataLog_User.dat"
Read 5583 records
[1] "CFKBDS2303-20260126-112336Z-DataLog_User.dat"
Read 5573 records
[1] "CFKBDS2303-20260126-122340Z-DataLog_User.dat"
Read 5528 records
[1] "CFKBDS2303-20260126-132345Z-DataLog_User.dat"
Read 5526 records
[1] "CFKBDS2303-20260126-142350Z-DataLog_User.dat"
Read 4017 records
[1] "Converting time stamp"
[1] "Median sample interval = 2.61 secs"
[1] "Median CO2 sample interval = 0.25 seconds"
[1] "Median CH4 sample interval = 0.45 seconds"
[1] "Median CO sample interval = 1.05 seconds"
[1] "Median H2O sample interval = 0.85 seconds"
[1] "Reading in raw Picarro sensor data files"
[1] "CFKBDS2303-20260126-025045Z-DataLog_User_Sensors.dat"
Read 827 records
[1] "CFKBDS2303-20260126-045610Z-DataLog_User_Sensors.dat"
Read 1043 records
[1] "CFKBDS2303-20260126-055617Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-065622Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-075627Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-085632Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-095637Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-105642Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-115647Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-125652Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-135657Z-DataLog_User_Sensors.dat"
Read 721 records
[1] "CFKBDS2303-20260126-145702Z-DataLog_User_Sensors.dat"
Read 124 records
[1] "Converting time stamp"
[1] "Reading int file: 260126a.int"
[1] 1
[1] 2
[1] 3
[1] 4
[1] 5
[1] 6
[1] 7
[1] 8
[1] 9
[1] 10
[1] 11
[1] 12
[1] 13
[1] 14
[1] 15
[1] 16
[1] 17
[1] 18
[1] 19
[1] 20
[1] "x"
[1] "Writing processed int output file: 260126a.int_out"
[1] "Removing any manually screened data"
[1] "Removed all data from 2 rows, keeping only period: 2026-01-26 03:15:46 to 2026-01-26 15:07:13"
[1] "Comparing to GPS time"
[1] "Median time offset (Picarro - GPS) = 5.68 seconds"
[1] "Range:"
[1] 5.19 6.93
[1] "Setting nonlocalfilt"
[1] "Flagged all data from 43178 rows: 2026-01-26 10:05:43 to 2026-01-26 12:17:32 for onIce influence"
[1] "Applying inlet lag"
[1] 135.3342
[1] "Median tlag offset from predicted:"
[1] -0.0462292
[1] "at high alt:"
[1] 0.1578071
[1] 299.5695
[1] "at low alt:"
[1] -0.2843865
[1] 758.3096
[1] "Range of tlag:"
[1] 23.95425 59.08123
      0%      25%      50%      75%     100% 
23.95425 28.16043 42.39069 49.61042 59.08123 
[1] "Applying cavity pressure and ambient pressure corrections"
[1] "Cavity pressure correction applied (co2, ch4, co, h2o coeffs):"
[1] 0.47 8.10 0.00 0.00
[1] "Cabin pressure correction applied (co2, ch4, co, h2o coeffs):"
[1] 0 0 0 0
[1] "Finding cal and sample periods"
[1] "Plotting specified intervals"
            startchar             endchar             startdt
1 2026-01-26 03:15:46 2026-01-26 15:07:13 2026-01-26 03:15:46
                enddt flag label
1 2026-01-26 15:07:13  all   all
[1] "Plotting all variables for period:"
            startchar             endchar             startdt
1 2026-01-26 03:15:46 2026-01-26 15:07:13 2026-01-26 03:15:46
                enddt flag label
1 2026-01-26 15:07:13  all   all
[1] "Plotting SDs of selected variables for period:"
            startchar             endchar             startdt
1 2026-01-26 03:15:46 2026-01-26 15:07:13 2026-01-26 03:15:46
                enddt flag label
1 2026-01-26 15:07:13  all   all
[1] "Plotting Deltas of selected variables for period:"
            startchar             endchar             startdt
1 2026-01-26 03:15:46 2026-01-26 15:07:13 2026-01-26 03:15:46
                enddt flag label
1 2026-01-26 15:07:13  all   all
[1] "co2dry_prescreen 0"
[1] "ch4dry_prescreen 0"
[1] "cmon_prescreen 0"
[1] "h2o_prescreen 0"
[1] "cavp 0.1"
[1] "ambp 0.1"
[1] "cavt 43.6"
[1] "boxt 47.6"
[1] "dast 69.2"
[1] "etalont 49"
[1] "flow1 2.5"
[1] "inletvlv 0"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Plotting all variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Plotting SDs of selected variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Plotting Deltas of selected variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "co2dry_prescreen 0"
[1] "ch4dry_prescreen 0"
[1] "cmon_prescreen 0"
[1] "h2o_prescreen 0"
[1] "cavp 0.1"
[1] "ambp 0.1"
[1] "cavt 43.6"
[1] "boxt 47.6"
[1] "dast 69.2"
[1] "etalont 49"
[1] "flow1 2.5"
[1] "inletvlv 0"
[1] "Plotting timeseries of concentration variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Re-plotting nonlocal timeseries of concentration variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Plotting profiles of concentration variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Re-plotting non-local profiles of concentration variables for period:"
            startchar             endchar             startdt
2 2026-01-26 07:13:40 2026-01-26 14:59:24 2026-01-26 07:13:40
                enddt   flag  label
2 2026-01-26 14:59:24 flight flight
[1] "Plotting inlet lag estimate"
            startchar             endchar             startdt
3 2026-01-26 02:50:45 2026-01-26 03:35:45 2026-01-26 02:50:45
                enddt   flag  label
3 2026-01-26 03:35:45 warmup warmup
[1] "Plotting warmup variables for period:"
            startchar             endchar             startdt
3 2026-01-26 02:50:45 2026-01-26 03:35:45 2026-01-26 02:50:45
                enddt   flag  label
3 2026-01-26 03:35:45 warmup warmup
            startchar             endchar             startdt
4 2026-01-26 07:13:40 2026-01-26 07:53:49 2026-01-26 07:13:40
                enddt flag  label
4 2026-01-26 07:53:49 prof MCMdep
[1] "Plotting profiles of concentration variables for period:"
            startchar             endchar             startdt
4 2026-01-26 07:13:40 2026-01-26 07:53:49 2026-01-26 07:13:40
                enddt flag  label
4 2026-01-26 07:53:49 prof MCMdep
            startchar             endchar             startdt
5 2026-01-26 07:13:40 2026-01-26 07:53:49 2026-01-26 07:13:40
                enddt flag  label
5 2026-01-26 07:53:49 tser MCMdep
[1] "Plotting timeseries of concentration variables for period:"
            startchar             endchar             startdt
5 2026-01-26 07:13:40 2026-01-26 07:53:49 2026-01-26 07:13:40
                enddt flag  label
5 2026-01-26 07:53:49 tser MCMdep
            startchar             endchar             startdt
6 2026-01-26 09:34:42 2026-01-26 10:05:43 2026-01-26 09:34:42
                enddt flag  label
6 2026-01-26 10:05:43 prof SPOarr
[1] "Plotting profiles of concentration variables for period:"
            startchar             endchar             startdt
6 2026-01-26 09:34:42 2026-01-26 10:05:43 2026-01-26 09:34:42
                enddt flag  label
6 2026-01-26 10:05:43 prof SPOarr
            startchar             endchar             startdt
7 2026-01-26 09:34:42 2026-01-26 10:05:43 2026-01-26 09:34:42
                enddt flag  label
7 2026-01-26 10:05:43 tser SPOarr
[1] "Plotting timeseries of concentration variables for period:"
            startchar             endchar             startdt
7 2026-01-26 09:34:42 2026-01-26 10:05:43 2026-01-26 09:34:42
                enddt flag  label
7 2026-01-26 10:05:43 tser SPOarr
            startchar             endchar             startdt
8 2026-01-26 12:17:32 2026-01-26 13:19:13 2026-01-26 12:17:32
                enddt flag  label
8 2026-01-26 13:19:13 prof SPOdep
[1] "Plotting profiles of concentration variables for period:"
            startchar             endchar             startdt
8 2026-01-26 12:17:32 2026-01-26 13:19:13 2026-01-26 12:17:32
                enddt flag  label
8 2026-01-26 13:19:13 prof SPOdep
            startchar             endchar             startdt
9 2026-01-26 12:17:32 2026-01-26 13:19:13 2026-01-26 12:17:32
                enddt flag  label
9 2026-01-26 13:19:13 tser SPOdep
[1] "Plotting timeseries of concentration variables for period:"
            startchar             endchar             startdt
9 2026-01-26 12:17:32 2026-01-26 13:19:13 2026-01-26 12:17:32
                enddt flag  label
9 2026-01-26 13:19:13 tser SPOdep
             startchar             endchar             startdt
10 2026-01-26 14:21:35 2026-01-26 14:59:24 2026-01-26 14:21:35
                 enddt flag  label
10 2026-01-26 14:59:24 prof MCMarr
[1] "Plotting profiles of concentration variables for period:"
             startchar             endchar             startdt
10 2026-01-26 14:21:35 2026-01-26 14:59:24 2026-01-26 14:21:35
                 enddt flag  label
10 2026-01-26 14:59:24 prof MCMarr
             startchar             endchar             startdt
11 2026-01-26 14:21:35 2026-01-26 14:59:24 2026-01-26 14:21:35
                 enddt flag  label
11 2026-01-26 14:59:24 tser MCMarr
[1] "Plotting timeseries of concentration variables for period:"
             startchar             endchar             startdt
11 2026-01-26 14:21:35 2026-01-26 14:59:24 2026-01-26 14:21:35
                 enddt flag  label
11 2026-01-26 14:59:24 tser MCMarr
             startchar             endchar             startdt
12 2026-01-26 10:05:43 2026-01-26 12:17:32 2026-01-26 10:05:43
                 enddt  flag label
12 2026-01-26 12:17:32 local onIce
             startchar             endchar             startdt
13 2026-01-26 06:45:00 2026-01-26 06:45:30 2026-01-26 06:45:00
                 enddt  flag label
13 2026-01-26 06:45:30 lkchk  Rack
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
13 2026-01-26 06:45:00 2026-01-26 06:45:30 2026-01-26 06:45:00
                 enddt  flag label
13 2026-01-26 06:45:30 lkchk  Rack
             startchar             endchar             startdt
14 2026-01-26 06:59:15 2026-01-26 06:59:45 2026-01-26 06:59:15
                 enddt  flag   label
14 2026-01-26 06:59:45 lkchk Picarro
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
14 2026-01-26 06:59:15 2026-01-26 06:59:45 2026-01-26 06:59:15
                 enddt  flag   label
14 2026-01-26 06:59:45 lkchk Picarro
             startchar             endchar             startdt
15 2026-01-26 07:52:33 2026-01-26 07:53:03 2026-01-26 07:52:33
                 enddt  flag label
15 2026-01-26 07:53:03 lkchk Hatch
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
15 2026-01-26 07:52:33 2026-01-26 07:53:03 2026-01-26 07:52:33
                 enddt  flag label
15 2026-01-26 07:53:03 lkchk Hatch
             startchar             endchar             startdt
16 2026-01-26 07:55:00 2026-01-26 07:55:30 2026-01-26 07:55:00
                 enddt  flag label
16 2026-01-26 07:55:30 lkchk  Rack
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
16 2026-01-26 07:55:00 2026-01-26 07:55:30 2026-01-26 07:55:00
                 enddt  flag label
16 2026-01-26 07:55:30 lkchk  Rack
             startchar             endchar             startdt
17 2026-01-26 07:57:48 2026-01-26 07:58:18 2026-01-26 07:57:48
                 enddt  flag   label
17 2026-01-26 07:58:18 lkchk Picarro
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
17 2026-01-26 07:57:48 2026-01-26 07:58:18 2026-01-26 07:57:48
                 enddt  flag   label
17 2026-01-26 07:58:18 lkchk Picarro
             startchar             endchar             startdt
18 2026-01-26 08:56:33 2026-01-26 08:57:03 2026-01-26 08:56:33
                 enddt  flag label
18 2026-01-26 08:57:03 lkchk Hatch
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
18 2026-01-26 08:56:33 2026-01-26 08:57:03 2026-01-26 08:56:33
                 enddt  flag label
18 2026-01-26 08:57:03 lkchk Hatch
             startchar             endchar             startdt
19 2026-01-26 09:00:00 2026-01-26 09:00:30 2026-01-26 09:00:00
                 enddt  flag label
19 2026-01-26 09:00:30 lkchk  Rack
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
19 2026-01-26 09:00:00 2026-01-26 09:00:30 2026-01-26 09:00:00
                 enddt  flag label
19 2026-01-26 09:00:30 lkchk  Rack
             startchar             endchar             startdt
20 2026-01-26 09:03:00 2026-01-26 09:03:30 2026-01-26 09:03:00
                 enddt  flag   label
20 2026-01-26 09:03:30 lkchk Picarro
[1] "Plotting concentration variables for leak check period:"
             startchar             endchar             startdt
20 2026-01-26 09:03:00 2026-01-26 09:03:30 2026-01-26 09:03:00
                 enddt  flag   label
20 2026-01-26 09:03:30 lkchk Picarro
 [1] "260126a_all_all_1.png"                 
 [2] "260126a_all_all_2.png"                 
 [3] "260126a_all_SDs.png"                   
 [4] "260126a_all_Deltas.png"                
 [5] "260126a_flight_flight_1.png"           
 [6] "260126a_flight_flight_2.png"           
 [7] "260126a_flight_SDs.png"                
 [8] "260126a_flight_Deltas.png"             
 [9] "260126a_flight_timeseries.png"         
[10] "260126a_flight_timeseries_nonlocal.png"
[11] "260126a_flight_profile.png"            
[12] "260126a_flight_profile_nonlocal.png"   
[13] "260126a_MCMdep_profile.png"            
[14] "260126a_MCMdep_timeseries.png"         
[15] "260126a_SPOarr_profile.png"            
[16] "260126a_SPOarr_timeseries.png"         
[17] "260126a_SPOdep_profile.png"            
[18] "260126a_SPOdep_timeseries.png"         
[19] "260126a_MCMarr_profile.png"            
[20] "260126a_MCMarr_timeseries.png"         
[21] "260126a_Rack_lkchk_1.png"              
[22] "260126a_Picarro_lkchk_1.png"           
[23] "260126a_Hatch_lkchk_1.png"             
[24] "260126a_Rack_lkchk_2.png"              
[25] "260126a_Picarro_lkchk_2.png"           
[26] "260126a_Hatch_lkchk_2.png"             
[27] "260126a_Rack_lkchk_3.png"              
[28] "260126a_Picarro_lkchk_3.png"           
[1] "Making flight html"
[1] "Making index html"
[1] "Outputting data files"