[1] "Tue Jan 20 13:13:33 2026" [1] "Analyzing 260119a" [1] "Reading in raw Picarro user data files" [1] "CFKBDS2303-20260119-200803Z-DataLog_User.dat" Read 5478 records [1] "CFKBDS2303-20260119-210809Z-DataLog_User.dat" Read 5543 records [1] "CFKBDS2303-20260119-220814Z-DataLog_User.dat" Read 5560 records [1] "CFKBDS2303-20260119-230820Z-DataLog_User.dat" Read 5565 records [1] "CFKBDS2303-20260120-000825Z-DataLog_User.dat" Read 5587 records [1] "CFKBDS2303-20260120-010830Z-DataLog_User.dat" Read 5581 records [1] "CFKBDS2303-20260120-020835Z-DataLog_User.dat" Read 5596 records [1] "CFKBDS2303-20260120-030841Z-DataLog_User.dat" Read 5585 records [1] "CFKBDS2303-20260120-040845Z-DataLog_User.dat" Read 5600 records [1] "CFKBDS2303-20260120-050850Z-DataLog_User.dat" Read 5576 records [1] "CFKBDS2303-20260120-060854Z-DataLog_User.dat" Read 2481 records [1] "Converting time stamp" [1] "Median sample interval = 2.59 secs" [1] "Median CO2 sample interval = 0.25 seconds" [1] "Median CH4 sample interval = 0.44 seconds" [1] "Median CO sample interval = 1.05 seconds" [1] "Median H2O sample interval = 0.85 seconds" [1] "Reading in raw Picarro sensor data files" [1] "CFKBDS2303-20260119-193525Z-DataLog_User_Sensors.dat" Read 121 records [1] "CFKBDS2303-20260119-194120Z-DataLog_User_Sensors.dat" Read 1041 records [1] "CFKBDS2303-20260119-204127Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260119-214132Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260119-224137Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260119-234142Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260120-004147Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260120-014152Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260120-024157Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260120-034202Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260120-044207Z-DataLog_User_Sensors.dat" Read 721 records [1] "CFKBDS2303-20260120-054212Z-DataLog_User_Sensors.dat" Read 649 records [1] "Converting time stamp" [1] "Reading int file: 260119a.int" [1] 1 [1] 2 [1] 3 [1] 4 [1] 5 [1] 6 [1] 7 [1] 8 [1] 9 [1] 10 [1] 11 [1] "x" [1] "Writing processed int output file: 260119a.int_out" [1] "Removing any manually screened data" [1] "Removed all data from 1 rows, keeping only period: 2026-01-19 20:07:59 to 2026-01-20 06:36:10" [1] "Comparing to GPS time" [1] "Median time offset (Picarro - GPS) = 14.12 seconds" [1] "Range:" [1] -30268.64 576.28 [1] "Setting nonlocalfilt" [1] "Despiking CH4 from 2026-01-20 05:18:02 to 2026-01-20 05:29:24" [1] "Removed 24 values" [1] "Applying inlet lag" [1] 135.1637 [1] "Median tlag offset from predicted:" [1] 0.1840169 [1] "at high alt:" [1] 0.1966936 [1] 258.4025 [1] "at low alt:" [1] -0.2581327 [1] 730.392 [1] "Range of tlag:" [1] 22.93904 59.16807 0% 25% 50% 75% 100% 22.93904 24.62169 26.26765 29.95492 59.16807 [1] "Applying cavity pressure and ambient pressure corrections" [1] "Cavity pressure correction applied (co2, ch4, co, h2o coeffs):" [1] 0.47 8.10 0.00 0.00 [1] "Cabin pressure correction applied (co2, ch4, co, h2o coeffs):" [1] 0 0 0 0 [1] "Finding cal and sample periods" [1] "Plotting specified intervals" startchar endchar startdt 1 2026-01-19 20:07:59 2026-01-20 06:36:10 2026-01-19 20:07:59 enddt flag label 1 2026-01-20 06:36:10 all all [1] "Plotting all variables for period:" startchar endchar startdt 1 2026-01-19 20:07:59 2026-01-20 06:36:10 2026-01-19 20:07:59 enddt flag label 1 2026-01-20 06:36:10 all all [1] "Plotting SDs of selected variables for period:" startchar endchar startdt 1 2026-01-19 20:07:59 2026-01-20 06:36:10 2026-01-19 20:07:59 enddt flag label 1 2026-01-20 06:36:10 all all [1] "Plotting Deltas of selected variables for period:" startchar endchar startdt 1 2026-01-19 20:07:59 2026-01-20 06:36:10 2026-01-19 20:07:59 enddt flag label 1 2026-01-20 06:36:10 all all [1] "co2dry_prescreen 0" [1] "ch4dry_prescreen 0" [1] "cmon_prescreen 0" [1] "h2o_prescreen 0" [1] "cavp 0.1" [1] "ambp 0" [1] "cavt 44.2" [1] "boxt 48" [1] "dast 71.7" [1] "etalont 49.2" [1] "flow1 2.3" [1] "inletvlv 0.2" startchar endchar startdt 2 2026-01-19 20:23:11 2026-01-20 06:11:03 2026-01-19 20:23:11 enddt flag label 2 2026-01-20 06:11:03 flight flight [1] "Plotting all variables for period:" startchar endchar startdt 2 2026-01-19 20:23:11 2026-01-20 06:11:03 2026-01-19 20:23:11 enddt flag label 2 2026-01-20 06:11:03 flight flight [1] "Plotting SDs of selected variables for period:" startchar endchar startdt 2 2026-01-19 20:23:11 2026-01-20 06:11:03 2026-01-19 20:23:11 enddt flag label 2 2026-01-20 06:11:03 flight flight [1] "Plotting Deltas of selected variables for period:" startchar endchar startdt 2 2026-01-19 20:23:11 2026-01-20 06:11:03 2026-01-19 20:23:11 enddt flag label 2 2026-01-20 06:11:03 flight flight [1] "co2dry_prescreen 0" [1] "ch4dry_prescreen 0" [1] "cmon_prescreen 0" [1] "h2o_prescreen 0" [1] "cavp 0.1" [1] "ambp 0" [1] "cavt 44.2" [1] "boxt 48" [1] "dast 71.7" [1] "etalont 49.2" [1] "flow1 2.3" [1] "inletvlv 0.2" [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 2 2026-01-19 20:23:11 2026-01-20 06:11:03 2026-01-19 20:23:11 enddt flag label 2 2026-01-20 06:11:03 flight flight [1] "Plotting profiles of concentration variables for period:" startchar endchar startdt 2 2026-01-19 20:23:11 2026-01-20 06:11:03 2026-01-19 20:23:11 enddt flag label 2 2026-01-20 06:11:03 flight flight [1] "Plotting inlet lag estimate" startchar endchar startdt 3 2026-01-19 19:35:25 2026-01-19 20:20:25 2026-01-19 19:35:25 enddt flag label 3 2026-01-19 20:20:25 warmup warmup [1] "Plotting warmup variables for period:" startchar endchar startdt 3 2026-01-19 19:35:25 2026-01-19 20:20:25 2026-01-19 19:35:25 enddt flag label 3 2026-01-19 20:20:25 warmup warmup startchar endchar startdt 4 2026-01-19 20:23:11 2026-01-19 20:45:00 2026-01-19 20:23:11 enddt flag label 4 2026-01-19 20:45:00 prof CHCdep [1] "Plotting profiles of concentration variables for period:" startchar endchar startdt 4 2026-01-19 20:23:11 2026-01-19 20:45:00 2026-01-19 20:23:11 enddt flag label 4 2026-01-19 20:45:00 prof CHCdep startchar endchar startdt 5 2026-01-19 20:23:11 2026-01-19 20:45:00 2026-01-19 20:23:11 enddt flag label 5 2026-01-19 20:45:00 tser CHCdep [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 5 2026-01-19 20:23:11 2026-01-19 20:45:00 2026-01-19 20:23:11 enddt flag label 5 2026-01-19 20:45:00 tser CHCdep startchar endchar startdt 6 2026-01-20 05:06:32 2026-01-20 06:11:03 2026-01-20 05:06:32 enddt flag label 6 2026-01-20 06:11:03 prof MCMarr [1] "Plotting profiles of concentration variables for period:" startchar endchar startdt 6 2026-01-20 05:06:32 2026-01-20 06:11:03 2026-01-20 05:06:32 enddt flag label 6 2026-01-20 06:11:03 prof MCMarr startchar endchar startdt 7 2026-01-20 05:06:32 2026-01-20 06:11:03 2026-01-20 05:06:32 enddt flag label 7 2026-01-20 06:11:03 tser MCMarr [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 7 2026-01-20 05:06:32 2026-01-20 06:11:03 2026-01-20 05:06:32 enddt flag label 7 2026-01-20 06:11:03 tser MCMarr startchar endchar startdt 8 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 8 2026-01-20 06:11:03 co2plume [1] "Reading in Raw file: ElijahTallTower.20251201.txt" [1] "Reading in Raw file: ElijahTallTower.20251203.txt" [1] "Reading in Raw file: ElijahTallTower.20251209.txt" [1] "Reading in Raw file: ElijahTallTower.20251210.txt" [1] "Reading in Raw file: ElijahTallTower.20251211.txt" [1] "Reading in Raw file: ElijahTallTower.20251212.txt" [1] "Reading in Raw file: ElijahTallTower.20251214.txt" [1] "Reading in Raw file: ElijahTallTower.20251215.txt" [1] "Reading in Raw file: ElijahTallTower.20251218.txt" [1] "Reading in Raw file: ElijahTallTower.20251219.txt" [1] "Reading in Raw file: ElijahTallTower.20251222.txt" [1] "Reading in Raw file: ElijahTallTower.20251223.txt" [1] "Reading in Raw file: ElijahTallTower.20251228.txt" [1] "Reading in Raw file: Linda.20251201.txt" [1] "Reading in Raw file: Linda.20251203.txt" [1] "Reading in Raw file: Linda.20251209.txt" [1] "Reading in Raw file: Linda.20251210.txt" [1] "Reading in Raw file: Linda.20251211.txt" [1] "Reading in Raw file: Linda.20251212.txt" [1] "Reading in Raw file: Linda.20251214.txt" [1] "Reading in Raw file: Linda.20251215.txt" [1] "Reading in Raw file: Linda.20251218.txt" [1] "Reading in Raw file: Linda.20251219.txt" [1] "Reading in Raw file: Linda.20251222.txt" [1] "Reading in Raw file: Linda.20251223.txt" [1] "Reading in Raw file: Linda.20251228.txt" [1] "Reading in Raw file: Lorne.20251201.txt" [1] "Reading in Raw file: Lorne.20251203.txt" [1] "Reading in Raw file: Lorne.20251209.txt" [1] "Reading in Raw file: Lorne.20251210.txt" [1] "Reading in Raw file: Lorne.20251211.txt" [1] "Reading in Raw file: Lorne.20251212.txt" [1] "Reading in Raw file: Lorne.20251214.txt" [1] "Reading in Raw file: Lorne.20251215.txt" [1] "Reading in Raw file: Lorne.20251218.txt" [1] "Reading in Raw file: Lorne.20251219.txt" [1] "Reading in Raw file: Lorne.20251222.txt" [1] "Reading in Raw file: Lorne.20251223.txt" [1] "Reading in Raw file: Lorne.20251228.txt" [1] "Reading in Raw file: MarblePointII.20251201.txt" [1] "Reading in Raw file: MarblePointII.20251203.txt" [1] "Reading in Raw file: MarblePointII.20251209.txt" [1] "Reading in Raw file: MarblePointII.20251210.txt" [1] "Reading in Raw file: MarblePointII.20251211.txt" [1] "Reading in Raw file: MarblePointII.20251212.txt" [1] "Reading in Raw file: MarblePointII.20251214.txt" [1] "Reading in Raw file: MarblePointII.20251215.txt" [1] "Reading in Raw file: MarblePointII.20251218.txt" [1] "Reading in Raw file: MarblePointII.20251219.txt" [1] "Reading in Raw file: MarblePointII.20251222.txt" [1] "Reading in Raw file: MarblePointII.20251223.txt" [1] "Reading in Raw file: MarblePointII.20251228.txt" [1] "Reading in Raw file: MinnaBluff.20251201.txt" [1] "Reading in Raw file: MinnaBluff.20251203.txt" [1] "Reading in Raw file: MinnaBluff.20251209.txt" [1] "Reading in Raw file: MinnaBluff.20251210.txt" [1] "Reading in Raw file: MinnaBluff.20251211.txt" [1] "Reading in Raw file: MinnaBluff.20251212.txt" [1] "Reading in Raw file: MinnaBluff.20251214.txt" [1] "Reading in Raw file: MinnaBluff.20251215.txt" [1] "Reading in Raw file: MinnaBluff.20251218.txt" [1] "Reading in Raw file: MinnaBluff.20251219.txt" [1] "Reading in Raw file: MinnaBluff.20251222.txt" [1] "Reading in Raw file: MinnaBluff.20251223.txt" [1] "Reading in Raw file: MinnaBluff.20251228.txt" [1] "Reading in Raw file: Phoenix.20251201.txt" [1] "Reading in Raw file: Phoenix.20251203.txt" [1] "Reading in Raw file: Phoenix.20251209.txt" [1] "Reading in Raw file: Phoenix.20251210.txt" [1] "Reading in Raw file: Phoenix.20251211.txt" [1] "Reading in Raw file: Phoenix.20251212.txt" [1] "Reading in Raw file: Phoenix.20251214.txt" [1] "Reading in Raw file: Phoenix.20251215.txt" [1] "Reading in Raw file: Phoenix.20251218.txt" [1] "Reading in Raw file: Phoenix.20251219.txt" [1] "Reading in Raw file: Phoenix.20251222.txt" [1] "Reading in Raw file: Phoenix.20251223.txt" [1] "Reading in Raw file: Phoenix.20251228.txt" [1] "Reading in Raw file: Sarah.20251121.txt" [1] "Reading in Raw file: Sarah.20251122.txt" [1] "Reading in Raw file: Sarah.20251127.txt" [1] "Reading in Raw file: Sarah.20251128.txt" [1] "Reading in Raw file: Sarah.20251130.txt" [1] "Reading in Raw file: Sarah.20251201.txt" [1] "Reading in Raw file: Sarah.20251203.txt" [1] "Reading in Raw file: Sarah.20251209.txt" [1] "Reading in Raw file: Sarah.20251210.txt" [1] "Reading in Raw file: Sarah.20251211.txt" [1] "Reading in Raw file: Sarah.20251212.txt" [1] "Reading in Raw file: Sarah.20251214.txt" [1] "Reading in Raw file: Sarah.20251215.txt" [1] "Reading in Raw file: Sarah.20251218.txt" [1] "Reading in Raw file: Sarah.20251219.txt" [1] "Reading in Raw file: Sarah.20251222.txt" [1] "Reading in Raw file: Sarah.20251223.txt" [1] "Reading in Raw file: Sarah.20251228.txt" [1] "Reading in Raw file: WhiteIsland.20251201.txt" [1] "Reading in Raw file: WhiteIsland.20251203.txt" [1] "Reading in Raw file: WhiteIsland.20251209.txt" [1] "Reading in Raw file: WhiteIsland.20251210.txt" [1] "Reading in Raw file: WhiteIsland.20251211.txt" [1] "Reading in Raw file: WhiteIsland.20251212.txt" [1] "Reading in Raw file: WhiteIsland.20251214.txt" [1] "Reading in Raw file: WhiteIsland.20251215.txt" [1] "Reading in Raw file: WhiteIsland.20251218.txt" [1] "Reading in Raw file: WhiteIsland.20251219.txt" [1] "Reading in Raw file: WhiteIsland.20251222.txt" [1] "Reading in Raw file: WhiteIsland.20251223.txt" [1] "Reading in Raw file: WhiteIsland.20251228.txt" [1] "Reading in Raw file: WindlessBight.20251209.txt" [1] "Reading in Raw file: WindlessBight.20251210.txt" [1] "Reading in Raw file: WindlessBight.20251211.txt" [1] "Reading in Raw file: WindlessBight.20251212.txt" [1] "Reading in Raw file: WindlessBight.20251214.txt" [1] "Reading in Raw file: WindlessBight.20251215.txt" [1] "Reading in Raw file: WindlessBight.20251218.txt" [1] "Reading in Raw file: WindlessBight.20251219.txt" [1] "Reading in Raw file: WindlessBight.20251222.txt" [1] "Reading in Raw file: WindlessBight.20251223.txt" [1] "Reading in Raw file: WindlessBight.20251228.txt" [1] "Reading in 3 ESNZ files" NULL NULL numeric(0) numeric(0) NULL startchar endchar startdt 9 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 9 2026-01-20 06:11:03 tser co2plume [1] "Plotting timeseries of concentration variables for period:" startchar endchar startdt 9 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 9 2026-01-20 06:11:03 tser co2plume startchar endchar startdt 10 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 10 2026-01-20 06:11:03 man diagnostics [1] "Plotting all variables for period:" startchar endchar startdt 10 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 10 2026-01-20 06:11:03 man diagnostics [1] "Plotting SDs of selected variables for period:" startchar endchar startdt 10 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 10 2026-01-20 06:11:03 man diagnostics [1] "Plotting Deltas of selected variables for period:" startchar endchar startdt 10 2026-01-20 05:30:00 2026-01-20 06:11:03 2026-01-20 05:30:00 enddt flag label 10 2026-01-20 06:11:03 man diagnostics [1] "co2dry_prescreen 0" [1] "ch4dry_prescreen 0" [1] "cmon_prescreen 0" [1] "h2o_prescreen 0" [1] "cavp 0.1" [1] "ambp 0" [1] "cavt 44.2" [1] "boxt 48" [1] "dast 71.7" [1] "etalont 49.2" [1] "flow1 2.3" [1] "inletvlv 0.2" startchar endchar startdt 11 2026-01-20 05:18:02 2026-01-20 05:29:24 2026-01-20 05:18:02 enddt flag label 11 2026-01-20 05:29:24 despikech4 [1] "260119a_all_all_1.png" "260119a_all_all_2.png" [3] "260119a_all_SDs.png" "260119a_all_Deltas.png" [5] "260119a_flight_flight_1.png" "260119a_flight_flight_2.png" [7] "260119a_flight_SDs.png" "260119a_flight_Deltas.png" [9] "260119a_flight_timeseries.png" "260119a_flight_profile.png" [11] "260119a_CHCdep_profile.png" "260119a_CHCdep_timeseries.png" [13] "260119a_MCMarr_profile.png" "260119a_MCMarr_timeseries.png" [15] "260119a_map_co2plume.png" "260119a_co2plume_timeseries.png" [17] "260119a_diagnostics_man_1.png" "260119a_diagnostics_man_2.png" [19] "260119a_diagnostics_SDs.png" "260119a_diagnostics_Deltas.png" [1] "Making flight html" [1] "Making index html" [1] "Outputting data files"