[1] "2025-04-30 03:03:23 MDT" [1] "1704" [1] "reading in daily output files:" [1] "/net/www/docs/homes/stephens/GO2/1704/170414.html" [2] "/net/www/docs/homes/stephens/GO2/1704/170415.html" [3] "/net/www/docs/homes/stephens/GO2/1704/170416.html" [4] "/net/www/docs/homes/stephens/GO2/1704/170417.html" [5] "/net/www/docs/homes/stephens/GO2/1704/170418.html" [6] "/net/www/docs/homes/stephens/GO2/1704/170419.html" [7] "/net/www/docs/homes/stephens/GO2/1704/170420.html" [8] "/net/www/docs/homes/stephens/GO2/1704/170421.html" [9] "/net/www/docs/homes/stephens/GO2/1704/170422.html" [10] "/net/www/docs/homes/stephens/GO2/1704/170423.html" [11] "/net/www/docs/homes/stephens/GO2/1704/170424.html" [12] "/net/www/docs/homes/stephens/GO2/1704/170425.html" [13] "/net/www/docs/homes/stephens/GO2/1704/170426.html" [14] "/net/www/docs/homes/stephens/GO2/1704/170427.html" [15] "/net/www/docs/homes/stephens/GO2/1704/170428.html" [16] "/net/www/docs/homes/stephens/GO2/1704/170429.html" [17] "/net/www/docs/homes/stephens/GO2/1704/170430.html" [18] "/net/www/docs/homes/stephens/GO2/1704/170501.html" [19] "/net/www/docs/homes/stephens/GO2/1704/170502.html" [20] "/net/www/docs/homes/stephens/GO2/1704/170503.html" [21] "/net/www/docs/homes/stephens/GO2/1704/170504.html" [22] "/net/www/docs/homes/stephens/GO2/1704/170505.html" [23] "/net/www/docs/homes/stephens/GO2/1704/170506.html" [24] "/net/www/docs/homes/stephens/GO2/1704/170507.html" [25] "/net/www/docs/homes/stephens/GO2/1704/170508.html" [26] "/net/www/docs/homes/stephens/GO2/1704/170509.html" [27] "/net/www/docs/homes/stephens/GO2/1704/170510.html" [28] "/net/www/docs/homes/stephens/GO2/1704/170511.html" [29] "/net/www/docs/homes/stephens/GO2/1704/170512.html" [30] "/net/www/docs/homes/stephens/GO2/1704/170513.html" [31] "/net/www/docs/homes/stephens/GO2/1704/170514.html" [32] "/net/www/docs/homes/stephens/GO2/1704/170515.html" [33] "/net/www/docs/homes/stephens/GO2/1704/170516.html" [34] "/net/www/docs/homes/stephens/GO2/1704/170517.html" [35] "/net/www/docs/homes/stephens/GO2/1704/170518.html" [36] "/net/www/docs/homes/stephens/GO2/1704/170519.html" [37] "/net/www/docs/homes/stephens/GO2/1704/170520.html" [38] "/net/www/docs/homes/stephens/GO2/1704/170521.html" [39] "/net/www/docs/homes/stephens/GO2/1704/170522.html" [40] "/net/www/docs/homes/stephens/GO2/1704/170523.html" [41] "/net/www/docs/homes/stephens/GO2/1704/170524.html" [42] "/net/www/docs/homes/stephens/GO2/1704/170525.html" [43] "/net/www/docs/homes/stephens/GO2/1704/170526.html" [44] "/net/www/docs/homes/stephens/GO2/1704/170527.html" [45] "/net/www/docs/homes/stephens/GO2/1704/lmg_1704.html" [1] "/net/www/docs/homes/stephens/GO2/1704/170414.html" [2] "/net/www/docs/homes/stephens/GO2/1704/170415.html" [3] "/net/www/docs/homes/stephens/GO2/1704/170416.html" [4] "/net/www/docs/homes/stephens/GO2/1704/170417.html" [5] "/net/www/docs/homes/stephens/GO2/1704/170418.html" [6] "/net/www/docs/homes/stephens/GO2/1704/170419.html" [7] "/net/www/docs/homes/stephens/GO2/1704/170420.html" [8] "/net/www/docs/homes/stephens/GO2/1704/170421.html" [9] "/net/www/docs/homes/stephens/GO2/1704/170422.html" [10] "/net/www/docs/homes/stephens/GO2/1704/170423.html" [11] "/net/www/docs/homes/stephens/GO2/1704/170424.html" [12] "/net/www/docs/homes/stephens/GO2/1704/170425.html" [13] "/net/www/docs/homes/stephens/GO2/1704/170426.html" [14] "/net/www/docs/homes/stephens/GO2/1704/170427.html" [15] "/net/www/docs/homes/stephens/GO2/1704/170428.html" [16] "/net/www/docs/homes/stephens/GO2/1704/170429.html" [17] "/net/www/docs/homes/stephens/GO2/1704/170430.html" [18] "/net/www/docs/homes/stephens/GO2/1704/170501.html" [19] "/net/www/docs/homes/stephens/GO2/1704/170502.html" [20] "/net/www/docs/homes/stephens/GO2/1704/170503.html" [21] "/net/www/docs/homes/stephens/GO2/1704/170504.html" [22] "/net/www/docs/homes/stephens/GO2/1704/170505.html" [23] "/net/www/docs/homes/stephens/GO2/1704/170506.html" [24] "/net/www/docs/homes/stephens/GO2/1704/170507.html" [25] "/net/www/docs/homes/stephens/GO2/1704/170508.html" [26] "/net/www/docs/homes/stephens/GO2/1704/170509.html" [27] "/net/www/docs/homes/stephens/GO2/1704/170510.html" [28] "/net/www/docs/homes/stephens/GO2/1704/170511.html" [29] "/net/www/docs/homes/stephens/GO2/1704/170512.html" [30] "/net/www/docs/homes/stephens/GO2/1704/170513.html" [31] "/net/www/docs/homes/stephens/GO2/1704/170514.html" [32] "/net/www/docs/homes/stephens/GO2/1704/170515.html" [33] "/net/www/docs/homes/stephens/GO2/1704/170516.html" [34] "/net/www/docs/homes/stephens/GO2/1704/170517.html" [35] "/net/www/docs/homes/stephens/GO2/1704/170518.html" [36] "/net/www/docs/homes/stephens/GO2/1704/170519.html" [37] "/net/www/docs/homes/stephens/GO2/1704/170520.html" [38] "/net/www/docs/homes/stephens/GO2/1704/170521.html" [39] "/net/www/docs/homes/stephens/GO2/1704/170522.html" [40] "/net/www/docs/homes/stephens/GO2/1704/170523.html" [41] "/net/www/docs/homes/stephens/GO2/1704/170524.html" [42] "/net/www/docs/homes/stephens/GO2/1704/170525.html" [43] "/net/www/docs/homes/stephens/GO2/1704/170526.html" [44] "/net/www/docs/homes/stephens/GO2/1704/170527.html" [1] "170414" "170527" [1] "170414" "170415" "170416" "170417" "170418" "170419" "170420" "170421" [9] "170422" "170423" "170424" "170425" "170426" "170427" "170428" "170429" [17] "170430" "170501" "170502" "170503" "170504" "170505" "170506" "170507" [25] "170508" "170509" "170510" "170511" "170512" "170513" "170514" "170515" [33] "170516" "170517" "170518" "170519" "170520" "170521" "170522" "170523" [41] "170524" "170525" "170526" "170527" [1] "000000" "999999" [1] "170414_mr_proc.txt, 170414_cal_periods.txt, 170414_cal_param.txt, 1098 jogs" [1] "170415_mr_proc.txt, 170415_cal_periods.txt, 170415_cal_param.txt, 613 jogs" [1] "170416_mr_proc.txt, 170416_cal_periods.txt, 170416_cal_param.txt, 1364 jogs" [1] "170417_mr_proc.txt, 170417_cal_periods.txt, 170417_cal_param.txt, 1341 jogs" [1] "170418_mr_proc.txt, 170418_cal_periods.txt, 170418_cal_param.txt, 1367 jogs" [1] "170419_mr_proc.txt, 170419_cal_periods.txt, 170419_cal_param.txt, 1111 jogs" [1] "170420_mr_proc.txt, 170420_cal_periods.txt, 170420_cal_param.txt, 935 jogs" [1] "170421_mr_proc.txt, 170421_cal_periods.txt, 170421_cal_param.txt, 535 jogs" [1] "170422_mr_proc.txt, 170422_cal_periods.txt, 170422_cal_param.txt, 538 jogs" [1] "Output file empty for 170423" [1] "Output file empty for 170424" [1] "170425_mr_proc.txt, 170425_cal_periods.txt, 170425_cal_param.txt, 226 jogs" [1] "170426_mr_proc.txt, 170426_cal_periods.txt, 170426_cal_param.txt, 1095 jogs" [1] "170427_mr_proc.txt, 170427_cal_periods.txt, 170427_cal_param.txt, 1116 jogs" [1] "170428_mr_proc.txt, 170428_cal_periods.txt, 170428_cal_param.txt, 1269 jogs" [1] "170429_mr_proc.txt, 170429_cal_periods.txt, 170429_cal_param.txt, 571 jogs" [1] "Output file empty for 170430" [1] "Output file empty for 170501" [1] "Output file empty for 170502" [1] "Output file empty for 170503" [1] "Output file empty for 170504" [1] "Output file empty for 170505" [1] "Output file empty for 170506" [1] "Output file empty for 170507" [1] "Output file empty for 170508" [1] "Output file empty for 170509" [1] "Output file empty for 170510" [1] "170511_mr_proc.txt, 170511_cal_periods.txt, 170511_cal_param.txt, 1390 jogs" [1] "170512_mr_proc.txt, 170512_cal_periods.txt, 170512_cal_param.txt, 1403 jogs" [1] "170513_mr_proc.txt, 170513_cal_periods.txt, 170513_cal_param.txt, 1397 jogs" [1] "170514_mr_proc.txt, 170514_cal_periods.txt, 170514_cal_param.txt, 995 jogs" [1] "170515_mr_proc.txt, 170515_cal_periods.txt, 170515_cal_param.txt, 1266 jogs" [1] "170516_mr_proc.txt, 170516_cal_periods.txt, 170516_cal_param.txt, 1403 jogs" [1] "170517_mr_proc.txt, 170517_cal_periods.txt, 170517_cal_param.txt, 1339 jogs" [1] "170518_mr_proc.txt, 170518_cal_periods.txt, 170518_cal_param.txt, 1233 jogs" [1] "170519_mr_proc.txt, 170519_cal_periods.txt, 170519_cal_param.txt, 1330 jogs" [1] "170520_mr_proc.txt, 170520_cal_periods.txt, 170520_cal_param.txt, 1284 jogs" [1] "170521_mr_proc.txt, 170521_cal_periods.txt, 170521_cal_param.txt, 1364 jogs" [1] "170522_mr_proc.txt, 170522_cal_periods.txt, 170522_cal_param.txt, 1258 jogs" [1] "170523_mr_proc.txt, 170523_cal_periods.txt, 170523_cal_param.txt, 1400 jogs" [1] "170524_mr_proc.txt, 170524_cal_periods.txt, 170524_cal_param.txt, 1366 jogs" [1] "170525_mr_proc.txt, 170525_cal_periods.txt, 170525_cal_param.txt, 1373 jogs" [1] "170526_mr_proc.txt, 170526_cal_periods.txt, 170526_cal_param.txt, 1393 jogs" [1] "170527_mr_proc.txt, 170527_cal_periods.txt, 170527_cal_param.txt, 989 jogs" [1] "170414" "170527" "d104" "d147" [1] "Calculating derived concentration values" [1] "2025-04-30 03:04:06 MDT" [1] "o2scaleopt = wt, ave o2scale1 = 0.964, ave o2scale2 = 0.892" [1] "redoing deltadiff calc" [1] "reading in medium-rate plot titles" [1] "Plotting 1-minute data" [1] "2025-04-30 03:04:18 MDT" [1] "Plotting O2 and CO2 concentration data" [1] "2025-04-30 03:04:47 MDT" [1] "2025-04-30 03:04:53 MDT" [1] "Reading in cylinder log" Read 78 records [1] "Finding cylinder IDs" Read 536 records [1] "position 1 cylinder CC339495 description: HS CO2 = 396.87 O2 = -495.4" [1] "position 2 cylinder CA07671 description: MS CO2 = 393.3 O2 = -526.1" [1] "position 3 cylinder CC339490 description: LS CO2 = 409.04 O2 = -699.1" [1] "position 4 cylinder CB08905 description: LT CO2 = 404.34 O2 = -653.2" [1] "position 5 cylinder CB10100 description: WT1 CO2 = NA O2 = NA" [1] "position 6 cylinder CB10100 description: WT2 CO2 = NA O2 = NA" [1] "Plotting jog shapes" [1] "1704 Valve transient for Line 1 after Cal = -0.19 , -0.07 , 0 , 0 , 0 n = 122" [1] "1704 Valve transient for Line 2 after Line 1 = -5.23 , -3.92 , -1.01 , 5.68 , 13.85 n = 1" [1] "1704 Valve transient for Line 2 after Cal = -0.42 , -0.24 , -0.06 , -0.08 , 0 n = 3" [1] "1704 Valve transient for Line 1 after HS = -0.22 , -0.13 , -0.02 , -0.01 , 0 n = 41" [1] "1704 Valve transient for Line 1 after MS = -0.26 , -0.1 , 0 , 0 , -0.01 n = 58" [1] "1704 Valve transient for Line 1 after LS = -0.32 , -0.25 , -0.3 , -0.51 , -0.33 n = 2" [1] "1704 Valve transient for Line 1 after LT = 1.79 , 1.25 , 0.44 , 0.1 , 0.07 n = 22" [1] "1704 Valve transient for Line 2 after HS = -0.52 , -0.44 , -0.36 , -0.35 , 0.17 n = 1" [1] "1704 Valve transient for Line 2 after MS = -0.42 , -0.24 , -0.06 , -0.08 , -0.1 n = 1" [1] "1704 Valve transient for Line 2 after LT = 2.24 , 1.58 , 0.47 , 0.02 , 0 n = 1" [1] "1704 Valve transient for HS after Line 1 = 0.22 , 0.1 , 0 , -0.01 , 0 n = 44" [1] "1704 Valve transient for HS after Line 2 = 0.2 , 0.1 , -0.01 , 0 , 0 n = 1" [1] "1704 Valve transient for HS after MS = -0.57 , -0.29 , 0.01 , 0.02 , 0.02 n = 1" [1] "1704 Valve transient for HS after LS = 1.83 , 0.91 , 0 , 0 , 0 n = 48" [1] "1704 Valve transient for MS after Line 1 = 0.35 , 0.17 , -0.01 , -0.02 , -0.02 n = 2" [1] "1704 Valve transient for MS after LS = 2.44 , 1.24 , 0.02 , 0.01 , 0 n = 31" [1] "1704 Valve transient for MS after LT = 2.06 , 1.03 , 0.01 , 0 , 0 n = 14" [1] "1704 Valve transient for LS after Line 1 = -1.87 , -0.95 , -0.02 , -0.01 , -0.01 n = 42" [1] "1704 Valve transient for LS after Line 2 = -1.12 , -0.59 , -0.06 , -0.05 , -0.04 n = 2" [1] "1704 Valve transient for LS after HS = -1.9 , -0.97 , -0.01 , -0.01 , 0 n = 44" [1] "1704 Valve transient for LT after HS = -0.39 , -0.19 , 0 , 0 , 0 n = 17" [1] "1704 Valve transient for LT after LS = 0.29 , 0.17 , 0.03 , 0.01 , 0.01 n = 15" [1] "Plotting calibration sds and slopes" [1] "Plotting calibration parameters" [1] "Plotting calibration data" [1] "821 out of 10530 remaining 1-min values OK w abs(diffback+difffwd)/2 < 0.2 and difference from interpolated clean < 0.2 ppm" [1] "9709 out of 30648 1-min values rejected as stack air" [1] "9423 out of 29779 Line 1 1-min values rejected as stack air" [1] "286 out of 869 Line 2 1-min values rejected as stack air" [1] "JGOFS data found" [1] "LOXY data found" [1] "LMG1704loxy.d104" [1] "LMG1704loxy.d105" [1] "LMG1704loxy.d106" [1] "LMG1704loxy.d107" [1] "LMG1704loxy.d108" [1] "LMG1704loxy.d109" [1] "LMG1704loxy.d111" [1] "LMG1704loxy.d112" [1] "LMG1704loxy.d113" [1] "LMG1704loxy.d114" [1] "LMG1704loxy.d115" [1] "LMG1704loxy.d117" [1] "LMG1704loxy.d118" [1] "LMG1704loxy.d119" [1] "LMG1704loxy.d122" [1] "LMG1704loxy.d123" [1] "LMG1704loxy.d124" [1] "LMG1704loxy.d125" [1] "LMG1704loxy.d126" [1] "LMG1704loxy.d127" [1] "LMG1704loxy.d128" [1] "LMG1704loxy.d129" [1] "LMG1704loxy.d130" [1] "LMG1704loxy.d137" [1] "LMG1704loxy.d138" [1] "LMG1704loxy.d139" [1] "LMG1704loxy.d140" [1] "LMG1704loxy.d141" [1] "LMG1704loxy.d142" [1] "LMG1704loxy.d144" [1] "LMG1704loxy.d145" [1] "LMG1704loxy.d146" [1] "LMG1704loxy.d147" [1] "calculating wind bins" [1] "aggregating 10 min SDs" [1] "aggregating O2s" [1] "calculating anomalous O2s" [1] "aggregating anomalous O2s" [1] "aggregating anomalous O2s diurnally" [,1] [,2] [1,] 92.5 1.4447884 [2,] 97.5 1.3415893 [3,] 102.5 1.7543860 [4,] 107.5 1.4447884 [5,] 112.5 0.8255934 [6,] 117.5 1.8575851 [7,] 122.5 1.4447884 [8,] 127.5 1.2383901 [9,] 132.5 1.2383901 [10,] 137.5 1.2383901 [11,] 142.5 1.0319917 [12,] 147.5 1.5479876 [13,] 152.5 0.3095975 [14,] 157.5 0.8255934 [15,] 162.5 0.7223942 [16,] 167.5 1.0319917 [17,] 172.5 0.6191950 [18,] 177.5 1.5479876 [19,] 182.5 1.3415893 [20,] 187.5 0.6191950 [21,] 192.5 1.8575851 [22,] 197.5 1.9607843 [23,] 202.5 0.2063983 [24,] 212.5 4.6439628 [25,] 217.5 0.5159959 [26,] 222.5 0.3095975 [27,] 227.5 0.6191950 [28,] 232.5 1.0319917 [29,] 237.5 0.3095975 [30,] 242.5 0.1031992 [31,] 247.5 0.3095975 [32,] 252.5 0.2063983 [33,] 257.5 0.2063983 [34,] 262.5 0.1031992 [35,] 267.5 0.4127967 [36,] 272.5 0.1031992 [37,] 277.5 0.4127967 [38,] 282.5 0.2063983 [39,] 287.5 0.2063983 [40,] 292.5 0.1031992 [41,] 317.5 0.2063983 [42,] 332.5 0.1031992 [43,] 347.5 0.1031992 [44,] 352.5 0.1031992 [45,] 362.5 0.1031992 [46,] 382.5 0.2063983 [47,] 397.5 0.1031992 [48,] 402.5 0.1031992 [49,] 412.5 0.1031992 [50,] 417.5 0.1031992 [51,] 422.5 1.5479876 [52,] 427.5 1.4447884 [53,] 432.5 1.4447884 [54,] 437.5 1.6511868 [55,] 442.5 1.2383901 [56,] 447.5 1.8575851 [,1] [,2] [1,] 92.5 1.1351909 [2,] 97.5 1.2383901 [3,] 102.5 0.9287926 [4,] 107.5 1.3415893 [5,] 112.5 1.4447884 [6,] 117.5 0.8255934 [7,] 122.5 0.7223942 [8,] 127.5 0.7223942 [9,] 132.5 0.7223942 [10,] 137.5 0.7223942 [11,] 142.5 0.5159959 [12,] 152.5 0.6191950 [13,] 157.5 0.2063983 [14,] 162.5 0.1031992 [15,] 182.5 0.1031992 [16,] 192.5 0.4127967 [17,] 197.5 0.5159959 [18,] 202.5 0.3095975 [19,] 207.5 0.7223942 [20,] 212.5 0.6191950 [21,] 217.5 7.6367389 [22,] 222.5 1.5479876 [23,] 227.5 0.4127967 [24,] 232.5 0.2063983 [25,] 237.5 0.4127967 [26,] 242.5 0.2063983 [27,] 327.5 0.1031992 [28,] 337.5 0.4127967 [29,] 372.5 0.1031992 [30,] 377.5 0.1031992 [31,] 382.5 0.2063983 [32,] 387.5 0.2063983 [33,] 392.5 0.1031992 [34,] 397.5 0.6191950 [35,] 402.5 0.5159959 [36,] 407.5 0.1031992 [37,] 427.5 0.3095975 [38,] 432.5 0.4127967 [39,] 437.5 0.3095975 [40,] 442.5 0.8255934 [41,] 447.5 0.9287926 [,1] [,2] [1,] 112.5 0.1031992 [2,] 117.5 0.2063983 [3,] 122.5 0.6191950 [4,] 127.5 0.1031992 [5,] 137.5 0.6191950 [6,] 142.5 0.5159959 [7,] 147.5 0.3095975 [8,] 152.5 0.1031992 [9,] 157.5 0.1031992 [10,] 162.5 0.2063983 [11,] 167.5 0.4127967 [12,] 177.5 0.5159959 [13,] 182.5 0.2063983 [14,] 187.5 0.6191950 [15,] 197.5 0.0000000 [16,] 367.5 0.7223942 [17,] 372.5 0.7223942 [18,] 377.5 0.5159959 [19,] 382.5 0.7223942 [20,] 387.5 0.8255934 [21,] 392.5 0.7223942 [22,] 397.5 3.4055728 [23,] 402.5 0.8255934 [24,] 407.5 1.0319917 [25,] 412.5 0.7223942 [26,] 417.5 0.3095975 [27,] 422.5 0.1031992 [28,] 427.5 0.7223942 [29,] 432.5 0.3095975 [30,] 437.5 0.2063983 [31,] 442.5 0.1031992 [,1] [,2] [1,] 102.5 0.1031992 [2,] 137.5 0.3095975 [3,] 142.5 0.4127967 [4,] 147.5 0.3095975 [5,] 152.5 0.2063983 [6,] 157.5 0.1031992 [7,] 162.5 0.3095975 [8,] 167.5 0.3095975 [9,] 172.5 0.2063983 [10,] 177.5 0.1031992 [11,] 197.5 0.2063983 [12,] 397.5 3.1991744 [13,] 402.5 0.3095975 [1] "making cruise html" [1] "2025-04-30 03:06:07 MDT" [1] "plotting cyl pressures" [1] "LMG" [1] "making time-series html" [1] "making latitude gradient html" [1] "making html"