[1] "2025-04-30 01:18:01 MDT" [1] "1601" [1] "reading in daily output files:" [1] "/net/www/docs/homes/stephens/GO2/1601/160104.html" [2] "/net/www/docs/homes/stephens/GO2/1601/160105.html" [3] "/net/www/docs/homes/stephens/GO2/1601/160106.html" [4] "/net/www/docs/homes/stephens/GO2/1601/160110.html" [5] "/net/www/docs/homes/stephens/GO2/1601/160111.html" [6] "/net/www/docs/homes/stephens/GO2/1601/160114.html" [7] "/net/www/docs/homes/stephens/GO2/1601/160115.html" [8] "/net/www/docs/homes/stephens/GO2/1601/160116.html" [9] "/net/www/docs/homes/stephens/GO2/1601/160117.html" [10] "/net/www/docs/homes/stephens/GO2/1601/160118.html" [11] "/net/www/docs/homes/stephens/GO2/1601/160119.html" [12] "/net/www/docs/homes/stephens/GO2/1601/160120.html" [13] "/net/www/docs/homes/stephens/GO2/1601/160121.html" [14] "/net/www/docs/homes/stephens/GO2/1601/160122.html" [15] "/net/www/docs/homes/stephens/GO2/1601/160123.html" [16] "/net/www/docs/homes/stephens/GO2/1601/160124.html" [17] "/net/www/docs/homes/stephens/GO2/1601/160125.html" [18] "/net/www/docs/homes/stephens/GO2/1601/160126.html" [19] "/net/www/docs/homes/stephens/GO2/1601/160127.html" [20] "/net/www/docs/homes/stephens/GO2/1601/160128.html" [21] "/net/www/docs/homes/stephens/GO2/1601/160129.html" [22] "/net/www/docs/homes/stephens/GO2/1601/160130.html" [23] "/net/www/docs/homes/stephens/GO2/1601/160131.html" [24] "/net/www/docs/homes/stephens/GO2/1601/160201.html" [25] "/net/www/docs/homes/stephens/GO2/1601/160202.html" [26] "/net/www/docs/homes/stephens/GO2/1601/160203.html" [27] "/net/www/docs/homes/stephens/GO2/1601/160204.html" [28] "/net/www/docs/homes/stephens/GO2/1601/160205.html" [29] "/net/www/docs/homes/stephens/GO2/1601/160206.html" [30] "/net/www/docs/homes/stephens/GO2/1601/160207.html" [31] "/net/www/docs/homes/stephens/GO2/1601/160208.html" [32] "/net/www/docs/homes/stephens/GO2/1601/160209.html" [33] "/net/www/docs/homes/stephens/GO2/1601/160210.html" [34] "/net/www/docs/homes/stephens/GO2/1601/160211.html" [35] "/net/www/docs/homes/stephens/GO2/1601/160212.html" [36] "/net/www/docs/homes/stephens/GO2/1601/160213.html" [37] "/net/www/docs/homes/stephens/GO2/1601/160214.html" [38] "/net/www/docs/homes/stephens/GO2/1601/160215.html" [39] "/net/www/docs/homes/stephens/GO2/1601/160216.html" [40] "/net/www/docs/homes/stephens/GO2/1601/lmg_1601.html" [1] "/net/www/docs/homes/stephens/GO2/1601/160104.html" [2] "/net/www/docs/homes/stephens/GO2/1601/160105.html" [3] "/net/www/docs/homes/stephens/GO2/1601/160106.html" [4] "/net/www/docs/homes/stephens/GO2/1601/160110.html" [5] "/net/www/docs/homes/stephens/GO2/1601/160111.html" [6] "/net/www/docs/homes/stephens/GO2/1601/160114.html" [7] "/net/www/docs/homes/stephens/GO2/1601/160115.html" [8] "/net/www/docs/homes/stephens/GO2/1601/160116.html" [9] "/net/www/docs/homes/stephens/GO2/1601/160117.html" [10] "/net/www/docs/homes/stephens/GO2/1601/160118.html" [11] "/net/www/docs/homes/stephens/GO2/1601/160119.html" [12] "/net/www/docs/homes/stephens/GO2/1601/160120.html" [13] "/net/www/docs/homes/stephens/GO2/1601/160121.html" [14] "/net/www/docs/homes/stephens/GO2/1601/160122.html" [15] "/net/www/docs/homes/stephens/GO2/1601/160123.html" [16] "/net/www/docs/homes/stephens/GO2/1601/160124.html" [17] "/net/www/docs/homes/stephens/GO2/1601/160125.html" [18] "/net/www/docs/homes/stephens/GO2/1601/160126.html" [19] "/net/www/docs/homes/stephens/GO2/1601/160127.html" [20] "/net/www/docs/homes/stephens/GO2/1601/160128.html" [21] "/net/www/docs/homes/stephens/GO2/1601/160129.html" [22] "/net/www/docs/homes/stephens/GO2/1601/160130.html" [23] "/net/www/docs/homes/stephens/GO2/1601/160131.html" [24] "/net/www/docs/homes/stephens/GO2/1601/160201.html" [25] "/net/www/docs/homes/stephens/GO2/1601/160202.html" [26] "/net/www/docs/homes/stephens/GO2/1601/160203.html" [27] "/net/www/docs/homes/stephens/GO2/1601/160204.html" [28] "/net/www/docs/homes/stephens/GO2/1601/160205.html" [29] "/net/www/docs/homes/stephens/GO2/1601/160206.html" [30] "/net/www/docs/homes/stephens/GO2/1601/160207.html" [31] "/net/www/docs/homes/stephens/GO2/1601/160208.html" [32] "/net/www/docs/homes/stephens/GO2/1601/160209.html" [33] "/net/www/docs/homes/stephens/GO2/1601/160210.html" [34] "/net/www/docs/homes/stephens/GO2/1601/160211.html" [35] "/net/www/docs/homes/stephens/GO2/1601/160212.html" [36] "/net/www/docs/homes/stephens/GO2/1601/160213.html" [37] "/net/www/docs/homes/stephens/GO2/1601/160214.html" [38] "/net/www/docs/homes/stephens/GO2/1601/160215.html" [39] "/net/www/docs/homes/stephens/GO2/1601/160216.html" [1] "160104" "160216" [1] "160104" "160105" "160106" "160110" "160111" "160114" "160115" "160116" [9] "160117" "160118" "160119" "160120" "160121" "160122" "160123" "160124" [17] "160125" "160126" "160127" "160128" "160129" "160130" "160131" "160201" [25] "160202" "160203" "160204" "160205" "160206" "160207" "160208" "160209" [33] "160210" "160211" "160212" "160213" "160214" "160215" "160216" [1] "000000" "999999" [1] "160104_mr_proc.txt, 160104_cal_periods.txt, 160104_cal_param.txt, 192 jogs" [1] "160105_mr_proc.txt, 160105_cal_periods.txt, 160105_cal_param.txt, 1430 jogs" [1] "160106_mr_proc.txt, 160106_cal_periods.txt, 160106_cal_param.txt, 378 jogs" [1] "160110_mr_proc.txt, 160110_cal_periods.txt, 160110_cal_param.txt, 638 jogs" [1] "160111_mr_proc.txt, 160111_cal_periods.txt, 160111_cal_param.txt, 965 jogs" [1] "160114_mr_proc.txt, 160114_cal_periods.txt, 160114_cal_param.txt, 31 jogs" [1] "160115_mr_proc.txt, 160115_cal_periods.txt, 160115_cal_param.txt, 942 jogs" [1] "160116_mr_proc.txt, 160116_cal_periods.txt, 160116_cal_param.txt, 1361 jogs" [1] "160117_mr_proc.txt, 160117_cal_periods.txt, 160117_cal_param.txt, 1409 jogs" [1] "160118_mr_proc.txt, 160118_cal_periods.txt, 160118_cal_param.txt, 1415 jogs" [1] "160119_mr_proc.txt, 160119_cal_periods.txt, 160119_cal_param.txt, 1068 jogs" [1] "160120_mr_proc.txt, 160120_cal_periods.txt, 160120_cal_param.txt, 735 jogs" [1] "160121_mr_proc.txt, 160121_cal_periods.txt, 160121_cal_param.txt, 1345 jogs" [1] "160122_mr_proc.txt, 160122_cal_periods.txt, 160122_cal_param.txt, 819 jogs" [1] "160123_mr_proc.txt, 160123_cal_periods.txt, 160123_cal_param.txt, 311 jogs" [1] "160124_mr_proc.txt, 160124_cal_periods.txt, 160124_cal_param.txt, 833 jogs" [1] "160125_mr_proc.txt, 160125_cal_periods.txt, 160125_cal_param.txt, 1052 jogs" [1] "160126_mr_proc.txt, 160126_cal_periods.txt, 160126_cal_param.txt, 1307 jogs" [1] "160127_mr_proc.txt, 160127_cal_periods.txt, 160127_cal_param.txt, 1398 jogs" [1] "160128_mr_proc.txt, 160128_cal_periods.txt, 160128_cal_param.txt, 1395 jogs" [1] "160129_mr_proc.txt, 160129_cal_periods.txt, 160129_cal_param.txt, 1275 jogs" [1] "160130_mr_proc.txt, 160130_cal_periods.txt, 160130_cal_param.txt, 1309 jogs" [1] "160131_mr_proc.txt, 160131_cal_periods.txt, 160131_cal_param.txt, 1088 jogs" [1] "160201_mr_proc.txt, 160201_cal_periods.txt, 160201_cal_param.txt, 1229 jogs" [1] "160202_mr_proc.txt, 160202_cal_periods.txt, 160202_cal_param.txt, 1384 jogs" [1] "160203_mr_proc.txt, 160203_cal_periods.txt, 160203_cal_param.txt, 1429 jogs" [1] "160204_mr_proc.txt, 160204_cal_periods.txt, 160204_cal_param.txt, 1317 jogs" [1] "160205_mr_proc.txt, 160205_cal_periods.txt, 160205_cal_param.txt, 1330 jogs" [1] "160206_mr_proc.txt, 160206_cal_periods.txt, 160206_cal_param.txt, 376 jogs" [1] "Output file empty for 160207" [1] "Output file empty for 160208" [1] "160209_mr_proc.txt, 160209_cal_periods.txt, 160209_cal_param.txt, 287 jogs" [1] "160210_mr_proc.txt, 160210_cal_periods.txt, 160210_cal_param.txt, 1094 jogs" [1] "Output file empty for 160211" [1] "Output file empty for 160212" [1] "160213_mr_proc.txt, 160213_cal_periods.txt, 160213_cal_param.txt, 476 jogs" [1] "160214_mr_proc.txt, 160214_cal_periods.txt, 160214_cal_param.txt, 1408 jogs" [1] "160215_mr_proc.txt, 160215_cal_periods.txt, 160215_cal_param.txt, 273 jogs" [1] "160216_mr_proc.txt, 160216_cal_periods.txt, 160216_cal_param.txt, 76 jogs" [1] "160104" "160216" "d004" "d047" [1] "Calculating derived concentration values" [1] "2025-04-30 01:18:48 MDT" [1] "o2scaleopt = wt, ave o2scale1 = 0.892, ave o2scale2 = 0.788" [1] "redoing deltadiff calc" [1] "reading in medium-rate plot titles" [1] "Plotting 1-minute data" [1] "2025-04-30 01:18:59 MDT" [1] "Plotting O2 and CO2 concentration data" [1] "2025-04-30 01:19:27 MDT" [1] "2025-04-30 01:19:33 MDT" [1] "Reading in cylinder log" Read 78 records [1] "Finding cylinder IDs" Read 536 records [1] "position 1 cylinder CB08910 description: HS CO2 = 384.68 O2 = -522.4" [1] "position 2 cylinder CA07671 description: MS CO2 = 393.3 O2 = -526.1" [1] "position 3 cylinder CB08911 description: LS CO2 = 406.18 O2 = -648.4" [1] "position 4 cylinder CC332564 description: LT CO2 = 394.11 O2 = -572.1" [1] "position 5 cylinder CB10023 description: WT1 CO2 = NA O2 = NA" [1] "position 6 cylinder CA07556 description: WT2 CO2 = NA O2 = NA" [1] "Plotting jog shapes" [1] "1601 Valve transient for Line 1 after Line 2 = 2.12 , 0.19 , -1.98 , -2.27 , -2.38 n = 2" [1] "1601 Valve transient for Line 1 after Cal = -0.57 , -0.26 , -0.01 , 0 , 0.01 n = 104" [1] "1601 Valve transient for Line 2 after Line 1 = 0.85 , -0.79 , -3.52 , -4.63 , -4.66 n = 2" [1] "1601 Valve transient for Line 1 after HS = -0.75 , -0.41 , -0.01 , -0.03 , -0.01 n = 50" [1] "1601 Valve transient for Line 1 after MS = -0.2 , -0.09 , 0 , 0.01 , 0.01 n = 49" [1] "1601 Valve transient for Line 1 after LS = NA , NA , NA , NA , NA n = 0" [1] "1601 Valve transient for Line 1 after LT = -3.39 , -2.4 , -0.89 , 0 , 0.09 n = 5" [1] "1601 Valve transient for HS after Line 1 = 0.73 , 0.37 , 0 , 0 , 0 n = 44" [1] "1601 Valve transient for HS after Line 2 = 0.73 , 0.37 , 0 , 0 , 0 n = 1" [1] "1601 Valve transient for HS after MS = 1.38 , 0.7 , 0.01 , 0.01 , 0 n = 4" [1] "1601 Valve transient for HS after LS = 3.36 , 1.69 , 0.01 , 0 , 0 n = 46" [1] "1601 Valve transient for MS after Line 1 = 0.01 , 0.01 , 0.01 , 0 , 0 n = 1" [1] "1601 Valve transient for MS after HS = -0.01 , 0 , 0 , NA , NA n = 1" [1] "1601 Valve transient for MS after LS = 2.01 , 1 , 0 , 0 , 0 n = 32" [1] "1601 Valve transient for MS after LT = 1.28 , 0.64 , 0 , 0 , 0 n = 13" [1] "1601 Valve transient for LS after Line 1 = -1.69 , -0.85 , 0 , 0 , 0 n = 49" [1] "1601 Valve transient for LS after HS = -3.45 , -1.74 , -0.01 , 0 , 0 n = 52" [1] "1601 Valve transient for LT after Line 1 = 0.02 , 0.01 , 0 , 0 , 0 n = 1" [1] "1601 Valve transient for LT after LS = 0.73 , 0.39 , 0.04 , 0.03 , 0.02 n = 17" [1] "Plotting calibration sds and slopes" [1] "Plotting calibration parameters" [1] "Plotting calibration data" [1] "536 out of 5315 remaining 1-min values OK w abs(diffback+difffwd)/2 < 0.2 and difference from interpolated clean < 0.2 ppm" [1] "4779 out of 29010 1-min values rejected as stack air" [1] "4663 out of 28663 Line 1 1-min values rejected as stack air" [1] "116 out of 347 Line 2 1-min values rejected as stack air" [1] "JGOFS data found" [1] "LOXY data found" [1] "LMG1601loxy.d004" [1] "LMG1601loxy.d005" [1] "LMG1601loxy.d006" [1] "LMG1601loxy.d007" [1] "LMG1601loxy.d008" [1] "LMG1601loxy.d010" [1] "LMG1601loxy.d011" [1] "LMG1601loxy.d012" [1] "LMG1601loxy.d013" [1] "LMG1601loxy.d014" [1] "LMG1601loxy.d015" [1] "LMG1601loxy.d016" [1] "LMG1601loxy.d017" [1] "LMG1601loxy.d018" [1] "LMG1601loxy.d019" [1] "LMG1601loxy.d020" [1] "LMG1601loxy.d021" [1] "LMG1601loxy.d022" [1] "LMG1601loxy.d023" [1] "LMG1601loxy.d024" [1] "LMG1601loxy.d025" [1] "LMG1601loxy.d026" [1] "LMG1601loxy.d027" [1] "LMG1601loxy.d028" [1] "LMG1601loxy.d029" [1] "LMG1601loxy.d030" [1] "LMG1601loxy.d031" [1] "LMG1601loxy.d032" [1] "LMG1601loxy.d033" [1] "LMG1601loxy.d034" [1] "LMG1601loxy.d035" [1] "LMG1601loxy.d036" [1] "LMG1601loxy.d037" [1] "LMG1601loxy.d038" [1] "LMG1601loxy.d039" [1] "LMG1601loxy.d040" [1] "LMG1601loxy.d041" [1] "LMG1601loxy.d042" [1] "LMG1601loxy.d043" [1] "LMG1601loxy.d044" [1] "LMG1601loxy.d045" [1] "LMG1601loxy.d046" [1] "LMG1601loxy.d047" [1] "calculating wind bins" [1] "aggregating 10 min SDs" [1] "aggregating O2s" [1] "calculating anomalous O2s" [1] "aggregating anomalous O2s" [1] "aggregating anomalous O2s diurnally" [,1] [,2] [1,] 242.5 16.66667 [2,] 277.5 16.66667 [3,] 287.5 16.66667 [,1] [,2] [1,] 252.5 16.66667 [2,] 307.5 16.66667 [3,] 317.5 16.66667 [,1] [,2] [,1] [,2] [1] "making cruise html" [1] "2025-04-30 01:20:49 MDT" [1] "plotting cyl pressures" [1] "LMG" [1] "making time-series html" [1] "making latitude gradient html" [1] "making html"