[1] "2017-04-07 13:47:40 MDT"
[1] "1505B"
[1] "reading in daily output files:"
 [1] "/net/www/docs/homes/stephens/GO2/1505B/150621.html"   
 [2] "/net/www/docs/homes/stephens/GO2/1505B/150622.html"   
 [3] "/net/www/docs/homes/stephens/GO2/1505B/150623.html"   
 [4] "/net/www/docs/homes/stephens/GO2/1505B/150624.html"   
 [5] "/net/www/docs/homes/stephens/GO2/1505B/150625.html"   
 [6] "/net/www/docs/homes/stephens/GO2/1505B/150626.html"   
 [7] "/net/www/docs/homes/stephens/GO2/1505B/150627.html"   
 [8] "/net/www/docs/homes/stephens/GO2/1505B/150628.html"   
 [9] "/net/www/docs/homes/stephens/GO2/1505B/150629.html"   
[10] "/net/www/docs/homes/stephens/GO2/1505B/lmg_1505B.html"
[1] "/net/www/docs/homes/stephens/GO2/1505B/150621.html"
[2] "/net/www/docs/homes/stephens/GO2/1505B/150622.html"
[3] "/net/www/docs/homes/stephens/GO2/1505B/150623.html"
[4] "/net/www/docs/homes/stephens/GO2/1505B/150624.html"
[5] "/net/www/docs/homes/stephens/GO2/1505B/150625.html"
[6] "/net/www/docs/homes/stephens/GO2/1505B/150626.html"
[7] "/net/www/docs/homes/stephens/GO2/1505B/150627.html"
[8] "/net/www/docs/homes/stephens/GO2/1505B/150628.html"
[9] "/net/www/docs/homes/stephens/GO2/1505B/150629.html"
[1] "150621" "150629"
[1] "150621" "150622" "150623" "150624" "150625" "150626" "150627" "150628"
[9] "150629"
[1] "000000" "999999"
[1] "150621_mr_proc.txt, 150621_cal_periods.txt, 150621_cal_param.txt,959jogs"
[1] "150622_mr_proc.txt, 150622_cal_periods.txt, 150622_cal_param.txt,1299jogs"
[1] "150623_mr_proc.txt, 150623_cal_periods.txt, 150623_cal_param.txt,1423jogs"
[1] "150624_mr_proc.txt, 150624_cal_periods.txt, 150624_cal_param.txt,1415jogs"
[1] "150625_mr_proc.txt, 150625_cal_periods.txt, 150625_cal_param.txt,679jogs"
[1] "150626_mr_proc.txt, 150626_cal_periods.txt, 150626_cal_param.txt,1402jogs"
[1] "150627_mr_proc.txt, 150627_cal_periods.txt, 150627_cal_param.txt,1410jogs"
[1] "150628_mr_proc.txt, 150628_cal_periods.txt, 150628_cal_param.txt,1228jogs"
[1] "150629_mr_proc.txt, 150629_cal_periods.txt, 150629_cal_param.txt,1079jogs"
[1] "150621" "150629" "d172"   "d180"  
[1] "Calculating derived concentration values"
[1] "2017-04-07 13:47:51 MDT"
[1] "o2scaleopt = wt, ave o2scale1 = 0.868, ave o2scale2 = 0.781"
[1] "redoing deltadiff calc"
[1] "reading in medium-rate plot titles"
[1] "Plotting 1-minute data"
[1] "2017-04-07 13:47:58 MDT"
[1] "Plotting O2 and CO2 concentration data"
[1] "2017-04-07 13:48:14 MDT"
[1] "2017-04-07 13:48:17 MDT"
[1] "Reading in cylinder log"
Read 68 records
[1] "Finding cylinder IDs"
Read 420 records
[1] "position 1 cylinder CB08910 description: HS CO2 = 384.48 O2 = -529.1"
[1] "position 2 cylinder CA07671 description: MS CO2 = 393.12 O2 = -532.4"
[1] "position 3 cylinder CB08911 description: LS CO2 = 405.98 O2 = -657.2"
[1] "position 4 cylinder CC332564 description: LT CO2 = 393.92 O2 = -579.3"
[1] "position 5 cylinder CB09982 description: WT1 CO2 = 479.15 O2 = -1145.4"
[1] "position 6 cylinder CB10019 description: WT2 CO2 = 407.32 O2 = -763"
[1] "Plotting jog shapes"
[1] "1505B Valve transient for  Line 1 after Line 2 = -7.85 , -5.07 , -1.64 , -1 , -0.44 n = 3"
[1] "1505B Valve transient for  Line 1 after Cal = -0.3 , -0.15 , -0.02 , 0 , 0 n = 30"
[1] "1505B Valve transient for  Line 2 after Line 1 = 10.85 , 8.2 , 2.82 , 0.05 , 0.01 n = 3"
[1] "1505B Valve transient for  Line 2 after Cal = -0.43 , -0.2 , 0.02 , 0.02 , 0.01 n = 2"
[1] "1505B Valve transient for  Line 1 after HS = -0.69 , -0.21 , -0.01 , -0.01 , -0.02 n = 10"
[1] "1505B Valve transient for  Line 1 after MS = -0.23 , -0.12 , -0.02 , -0.02 , -0.01 n = 14"
[1] "1505B Valve transient for  Line 1 after LT = -3.16 , -2.27 , -0.68 , 0.07 , 0.09 n = 6"
[1] "1505B Valve transient for  Line 2 after HS = -0.61 , -0.27 , 0.08 , 0.08 , 0.06 n = 1"
[1] "1505B Valve transient for  Line 2 after MS = -0.25 , -0.14 , -0.03 , -0.03 , -0.03 n = 1"
[1] "1505B Valve transient for  HS after Line 1 = 0.65 , 0.33 , 0 , 0 , 0 n = 10"
[1] "1505B Valve transient for  HS after Line 2 = 0.64 , 0.32 , 0 , 0.01 , 0 n = 1"
[1] "1505B Valve transient for  HS after MS = 1.4 , 0.7 , 0 , -0.01 , 0 n = 1"
[1] "1505B Valve transient for  HS after LS = 3.28 , 1.65 , 0 , 0 , 0 n = 13"
[1] "1505B Valve transient for  MS after Line 1 = -0.01 , -0.01 , -0.01 , 0 , 0 n = 1"
[1] "1505B Valve transient for  MS after LS = 1.95 , 0.97 , -0.01 , -0.01 , 0 n = 9"
[1] "1505B Valve transient for  MS after LT = 1.26 , 0.63 , -0.01 , 0 , 0.01 n = 3"
[1] "1505B Valve transient for  LS after Line 1 = -1.65 , -0.83 , -0.01 , 0 , 0 n = 10"
[1] "1505B Valve transient for  LS after Line 2 = -1.69 , -0.86 , -0.01 , -0.01 , -0.01 n = 4"
[1] "1505B Valve transient for  LS after HS = -3.41 , -1.72 , -0.02 , -0.01 , -0.01 n = 15"
[1] "1505B Valve transient for  LT after HS = -0.37 , -0.16 , 0.04 , 0.03 , 0.03 n = 3"
[1] "1505B Valve transient for  LT after LS = 0.66 , 0.36 , 0.05 , 0.03 , 0.03 n = 5"
[1] "Plotting calibration sds and slopes"
[1] "Plotting calibration parameters"
[1] "Plotting calibration data"
[1] "195 out of 2088 remaining 1-min values OK w abs(diffback+difffwd)/2 < 0.2 and difference from interpolated clean < 0.2 ppm"
[1] "1893 out of 9448 1-min values rejected as stack air"
[1] "1694 out of 8113 Line 1 1-min values rejected as stack air"
[1] "199 out of 1335 Line 2 1-min values rejected as stack air"
[1] "JGOFS data found"
[1] "LOXY data found"
[1] "LMG1505Bloxy.d172"
[1] "LMG1505Bloxy.d173"
[1] "LMG1505Bloxy.d174"
[1] "LMG1505Bloxy.d175"
[1] "LMG1505Bloxy.d177"
[1] "LMG1505Bloxy.d178"
[1] "LMG1505Bloxy.d179"
[1] "LMG1505Bloxy.d180"
[1] "LMG1505Bloxy.d181"
[1] "calculating wind bins"
[1] "aggregating 10 min SDs"
[1] "aggregating O2s"
[1] "calculating anomalous O2s"
[1] "aggregating anomalous O2s"
[1] "aggregating anomalous O2s diurnally"
     [,1] [,2]
      [,1]      [,2]
[1,] 107.5 0.5649718
[2,] 142.5 0.5649718
[3,] 262.5 0.5649718
       [,1]      [,2]
 [1,]  97.5 0.5649718
 [2,] 102.5 0.5649718
 [3,] 107.5 1.6949153
 [4,] 112.5 1.1299435
 [5,] 117.5 1.6949153
 [6,] 122.5 2.2598870
 [7,] 127.5 0.5649718
 [8,] 132.5 3.9548023
 [9,] 137.5 1.6949153
[10,] 142.5 0.5649718
[11,] 152.5 1.6949153
[12,] 157.5 0.5649718
[13,] 167.5 0.5649718
[14,] 327.5 0.5649718
[15,] 337.5 0.5649718
[16,] 347.5 0.5649718
[17,] 372.5 2.2598870
[18,] 377.5 2.2598870
[19,] 382.5 1.6949153
[20,] 387.5 2.8248588
[21,] 392.5 2.8248588
[22,] 397.5 0.5649718
[23,] 412.5 0.5649718
[24,] 432.5 0.5649718
[25,] 437.5 1.1299435
[26,] 447.5 0.5649718
       [,1]      [,2]
 [1,]  92.5 0.5649718
 [2,] 102.5 2.2598870
 [3,] 107.5 1.1299435
 [4,] 112.5 0.5649718
 [5,] 117.5 2.2598870
 [6,] 122.5 2.8248588
 [7,] 127.5 2.2598870
 [8,] 132.5 1.6949153
 [9,] 137.5 2.2598870
[10,] 142.5 0.5649718
[11,] 147.5 0.5649718
[12,] 152.5 1.1299435
[13,] 157.5 1.1299435
[14,] 162.5 1.6949153
[15,] 167.5 0.5649718
[16,] 172.5 1.1299435
[17,] 177.5 0.5649718
[18,] 182.5 0.5649718
[19,] 192.5 0.5649718
[20,] 202.5 0.5649718
[21,] 207.5 1.1299435
[22,] 227.5 1.6949153
[23,] 242.5 0.5649718
[24,] 247.5 1.1299435
[25,] 262.5 0.5649718
[26,] 272.5 1.1299435
[27,] 277.5 0.5649718
[28,] 292.5 0.5649718
[29,] 297.5 1.1299435
[30,] 312.5 0.5649718
[31,] 317.5 0.5649718
[32,] 322.5 0.5649718
[33,] 337.5 0.5649718
[34,] 347.5 1.6949153
[35,] 367.5 1.6949153
[36,] 372.5 2.8248588
[37,] 377.5 2.2598870
[38,] 382.5 1.6949153
[39,] 387.5 1.1299435
[40,] 392.5 1.1299435
[41,] 397.5 0.5649718
[42,] 407.5 2.2598870
[43,] 412.5 2.2598870
[44,] 417.5 2.8248588
[45,] 422.5 2.2598870
[46,] 427.5 1.1299435
[47,] 432.5 2.2598870
[48,] 437.5 1.1299435
[49,] 442.5 1.1299435
[1] "making cruise html"
[1] "2017-04-07 13:48:38 MDT"
[1] "plotting cyl pressures"
[1] "LMG"
[1] "making time-series html"
[1] "making latitude gradient html"
[1] "making html"