[1] "2025-04-29 19:14:15 MDT" [1] "1306" [1] "reading in daily output files:" [1] "/net/www/docs/homes/stephens/GO2/1306/130601.html" [2] "/net/www/docs/homes/stephens/GO2/1306/130602.html" [3] "/net/www/docs/homes/stephens/GO2/1306/130603.html" [4] "/net/www/docs/homes/stephens/GO2/1306/130604.html" [5] "/net/www/docs/homes/stephens/GO2/1306/130605.html" [6] "/net/www/docs/homes/stephens/GO2/1306/130606.html" [7] "/net/www/docs/homes/stephens/GO2/1306/130607.html" [8] "/net/www/docs/homes/stephens/GO2/1306/130608.html" [9] "/net/www/docs/homes/stephens/GO2/1306/130609.html" [10] "/net/www/docs/homes/stephens/GO2/1306/130610.html" [11] "/net/www/docs/homes/stephens/GO2/1306/130611.html" [12] "/net/www/docs/homes/stephens/GO2/1306/130612.html" [13] "/net/www/docs/homes/stephens/GO2/1306/130613.html" [14] "/net/www/docs/homes/stephens/GO2/1306/130614.html" [15] "/net/www/docs/homes/stephens/GO2/1306/130615.html" [16] "/net/www/docs/homes/stephens/GO2/1306/130616.html" [17] "/net/www/docs/homes/stephens/GO2/1306/130617.html" [18] "/net/www/docs/homes/stephens/GO2/1306/130618.html" [19] "/net/www/docs/homes/stephens/GO2/1306/130619.html" [20] "/net/www/docs/homes/stephens/GO2/1306/130620.html" [21] "/net/www/docs/homes/stephens/GO2/1306/130621.html" [22] "/net/www/docs/homes/stephens/GO2/1306/130622.html" [23] "/net/www/docs/homes/stephens/GO2/1306/130623.html" [24] "/net/www/docs/homes/stephens/GO2/1306/130624.html" [25] "/net/www/docs/homes/stephens/GO2/1306/130625.html" [26] "/net/www/docs/homes/stephens/GO2/1306/130626.html" [27] "/net/www/docs/homes/stephens/GO2/1306/130627.html" [28] "/net/www/docs/homes/stephens/GO2/1306/130628.html" [29] "/net/www/docs/homes/stephens/GO2/1306/130629.html" [30] "/net/www/docs/homes/stephens/GO2/1306/130630.html" [31] "/net/www/docs/homes/stephens/GO2/1306/130701.html" [32] "/net/www/docs/homes/stephens/GO2/1306/130702.html" [33] "/net/www/docs/homes/stephens/GO2/1306/130703.html" [34] "/net/www/docs/homes/stephens/GO2/1306/130704.html" [35] "/net/www/docs/homes/stephens/GO2/1306/130705.html" [36] "/net/www/docs/homes/stephens/GO2/1306/lmg_1306.html" [1] "/net/www/docs/homes/stephens/GO2/1306/130601.html" [2] "/net/www/docs/homes/stephens/GO2/1306/130602.html" [3] "/net/www/docs/homes/stephens/GO2/1306/130603.html" [4] "/net/www/docs/homes/stephens/GO2/1306/130604.html" [5] "/net/www/docs/homes/stephens/GO2/1306/130605.html" [6] "/net/www/docs/homes/stephens/GO2/1306/130606.html" [7] "/net/www/docs/homes/stephens/GO2/1306/130607.html" [8] "/net/www/docs/homes/stephens/GO2/1306/130608.html" [9] "/net/www/docs/homes/stephens/GO2/1306/130609.html" [10] "/net/www/docs/homes/stephens/GO2/1306/130610.html" [11] "/net/www/docs/homes/stephens/GO2/1306/130611.html" [12] "/net/www/docs/homes/stephens/GO2/1306/130612.html" [13] "/net/www/docs/homes/stephens/GO2/1306/130613.html" [14] "/net/www/docs/homes/stephens/GO2/1306/130614.html" [15] "/net/www/docs/homes/stephens/GO2/1306/130615.html" [16] "/net/www/docs/homes/stephens/GO2/1306/130616.html" [17] "/net/www/docs/homes/stephens/GO2/1306/130617.html" [18] "/net/www/docs/homes/stephens/GO2/1306/130618.html" [19] "/net/www/docs/homes/stephens/GO2/1306/130619.html" [20] "/net/www/docs/homes/stephens/GO2/1306/130620.html" [21] "/net/www/docs/homes/stephens/GO2/1306/130621.html" [22] "/net/www/docs/homes/stephens/GO2/1306/130622.html" [23] "/net/www/docs/homes/stephens/GO2/1306/130623.html" [24] "/net/www/docs/homes/stephens/GO2/1306/130624.html" [25] "/net/www/docs/homes/stephens/GO2/1306/130625.html" [26] "/net/www/docs/homes/stephens/GO2/1306/130626.html" [27] "/net/www/docs/homes/stephens/GO2/1306/130627.html" [28] "/net/www/docs/homes/stephens/GO2/1306/130628.html" [29] "/net/www/docs/homes/stephens/GO2/1306/130629.html" [30] "/net/www/docs/homes/stephens/GO2/1306/130630.html" [31] "/net/www/docs/homes/stephens/GO2/1306/130701.html" [32] "/net/www/docs/homes/stephens/GO2/1306/130702.html" [33] "/net/www/docs/homes/stephens/GO2/1306/130703.html" [34] "/net/www/docs/homes/stephens/GO2/1306/130704.html" [35] "/net/www/docs/homes/stephens/GO2/1306/130705.html" [1] "130601" "130705" [1] "130601" "130602" "130603" "130604" "130605" "130606" "130607" "130608" [9] "130609" "130610" "130611" "130612" "130613" "130614" "130615" "130616" [17] "130617" "130618" "130619" "130620" "130621" "130622" "130623" "130624" [25] "130625" "130626" "130627" "130628" "130629" "130630" "130701" "130702" [33] "130703" "130704" "130705" [1] "000000" "999999" [1] "130601_mr_proc.txt, 130601_cal_periods.txt, 130601_cal_param.txt, 1329 jogs" [1] "130602_mr_proc.txt, 130602_cal_periods.txt, 130602_cal_param.txt, 1428 jogs" [1] "130603_mr_proc.txt, 130603_cal_periods.txt, 130603_cal_param.txt, 1422 jogs" [1] "130604_mr_proc.txt, 130604_cal_periods.txt, 130604_cal_param.txt, 1418 jogs" [1] "130605_mr_proc.txt, 130605_cal_periods.txt, 130605_cal_param.txt, 1418 jogs" [1] "130606_mr_proc.txt, 130606_cal_periods.txt, 130606_cal_param.txt, 1322 jogs" [1] "130607_mr_proc.txt, 130607_cal_periods.txt, 130607_cal_param.txt, 1426 jogs" [1] "130608_mr_proc.txt, 130608_cal_periods.txt, 130608_cal_param.txt, 1281 jogs" [1] "130609_mr_proc.txt, 130609_cal_periods.txt, 130609_cal_param.txt, 1092 jogs" [1] "130610_mr_proc.txt, 130610_cal_periods.txt, 130610_cal_param.txt, 892 jogs" [1] "130611_mr_proc.txt, 130611_cal_periods.txt, 130611_cal_param.txt, 880 jogs" [1] "130612_mr_proc.txt, 130612_cal_periods.txt, 130612_cal_param.txt, 1317 jogs" [1] "130613_mr_proc.txt, 130613_cal_periods.txt, 130613_cal_param.txt, 1350 jogs" [1] "130614_mr_proc.txt, 130614_cal_periods.txt, 130614_cal_param.txt, 1358 jogs" [1] "130615_mr_proc.txt, 130615_cal_periods.txt, 130615_cal_param.txt, 1309 jogs" [1] "130616_mr_proc.txt, 130616_cal_periods.txt, 130616_cal_param.txt, 1176 jogs" [1] "130617_mr_proc.txt, 130617_cal_periods.txt, 130617_cal_param.txt, 1418 jogs" [1] "130618_mr_proc.txt, 130618_cal_periods.txt, 130618_cal_param.txt, 1420 jogs" [1] "130619_mr_proc.txt, 130619_cal_periods.txt, 130619_cal_param.txt, 1381 jogs" [1] "130620_mr_proc.txt, 130620_cal_periods.txt, 130620_cal_param.txt, 1248 jogs" [1] "130621_mr_proc.txt, 130621_cal_periods.txt, 130621_cal_param.txt, 1325 jogs" [1] "130622_mr_proc.txt, 130622_cal_periods.txt, 130622_cal_param.txt, 1306 jogs" [1] "130623_mr_proc.txt, 130623_cal_periods.txt, 130623_cal_param.txt, 1425 jogs" [1] "130624_mr_proc.txt, 130624_cal_periods.txt, 130624_cal_param.txt, 1357 jogs" [1] "130625_mr_proc.txt, 130625_cal_periods.txt, 130625_cal_param.txt, 1267 jogs" [1] "130626_mr_proc.txt, 130626_cal_periods.txt, 130626_cal_param.txt, 1189 jogs" [1] "130627_mr_proc.txt, 130627_cal_periods.txt, 130627_cal_param.txt, 1360 jogs" [1] "130628_mr_proc.txt, 130628_cal_periods.txt, 130628_cal_param.txt, 1401 jogs" [1] "130629_mr_proc.txt, 130629_cal_periods.txt, 130629_cal_param.txt, 1344 jogs" [1] "130630_mr_proc.txt, 130630_cal_periods.txt, 130630_cal_param.txt, 1287 jogs" [1] "130701_mr_proc.txt, 130701_cal_periods.txt, 130701_cal_param.txt, 1310 jogs" [1] "130702_mr_proc.txt, 130702_cal_periods.txt, 130702_cal_param.txt, 1271 jogs" [1] "130703_mr_proc.txt, 130703_cal_periods.txt, 130703_cal_param.txt, 1309 jogs" [1] "130704_mr_proc.txt, 130704_cal_periods.txt, 130704_cal_param.txt, 1405 jogs" [1] "130705_mr_proc.txt, 130705_cal_periods.txt, 130705_cal_param.txt, 1356 jogs" [1] "130601" "130705" "d152" "d186" [1] "Calculating derived concentration values" [1] "2025-04-29 19:15:25 MDT" [1] "o2scaleopt = wt, ave o2scale1 = 0.779, ave o2scale2 = 0.723" [1] "redoing deltadiff calc" [1] "reading in medium-rate plot titles" [1] "Plotting 1-minute data" [1] "2025-04-29 19:15:48 MDT" [1] "Plotting O2 and CO2 concentration data" [1] "2025-04-29 19:16:26 MDT" [1] "2025-04-29 19:16:34 MDT" [1] "Reading in cylinder log" Read 78 records [1] "Finding cylinder IDs" Read 536 records [1] "position 1 cylinder CB08910 description: HS CO2 = 374.31 O2 = -447.8" [1] "position 2 cylinder CB08911 description: MS CO2 = 405.33 O2 = -625.1" [1] "position 3 cylinder CB08905 description: LS CO2 = 394.97 O2 = -542.6" [1] "position 4 cylinder CC332564 description: LT CO2 = 394.07 O2 = -572.2" [1] "position 5 cylinder CB10023 description: WT1 CO2 = NA O2 = NA" [1] "position 6 cylinder CB10019 description: WT2 CO2 = 407.52 O2 = -753.5" [1] "Plotting jog shapes" [1] "1306 Valve transient for Line 1 after Line 2 = 0.09 , 0.13 , 0.31 , 0.26 , 0.18 n = 14" [1] "1306 Valve transient for Line 1 after Cal = 0.04 , 0.03 , 0.03 , 0.06 , 0.07 n = 128" [1] "1306 Valve transient for Line 2 after Line 1 = 2.63 , 1.54 , 0.8 , 0.08 , 0.07 n = 10" [1] "1306 Valve transient for Line 2 after Cal = 0.48 , 0.13 , -0.02 , 0.01 , 0.01 n = 12" [1] "1306 Valve transient for Line 1 after HS = -1.3 , -0.63 , 0.03 , 0.04 , 0.03 n = 44" [1] "1306 Valve transient for Line 1 after MS = 0.89 , 0.45 , 0.04 , 0.03 , 0.05 n = 57" [1] "1306 Valve transient for Line 1 after LT = -1.59 , -1.16 , -0.34 , 0.46 , 0.6 n = 27" [1] "1306 Valve transient for Line 2 after HS = -1.29 , -0.64 , 0.05 , 0.07 , 0.07 n = 4" [1] "1306 Valve transient for Line 2 after MS = 0.82 , 0.39 , -0.04 , -0.01 , 0 n = 8" [1] "1306 Valve transient for Line 2 after LT = -2.02 , -1.1 , 0.73 , 1.69 , 1.67 n = 1" [1] "1306 Valve transient for HS after Line 1 = 1.13 , 0.58 , 0 , -0.01 , 0 n = 52" [1] "1306 Valve transient for HS after Line 2 = 1.11 , 0.56 , 0.01 , 0.01 , 0 n = 10" [1] "1306 Valve transient for HS after LS = 3.47 , 1.74 , 0.01 , 0 , 0 n = 66" [1] "1306 Valve transient for MS after LS = -1.68 , -0.85 , -0.02 , -0.01 , -0.01 n = 40" [1] "1306 Valve transient for MS after LT = -1.79 , -0.9 , -0.01 , -0.01 , -0.01 n = 20" [1] "1306 Valve transient for LS after Line 1 = 0.92 , 0.47 , 0.01 , 0 , 0 n = 46" [1] "1306 Valve transient for LS after Line 2 = 0.92 , 0.47 , 0 , 0 , 0 n = 12" [1] "1306 Valve transient for LS after HS = -3.35 , -1.68 , -0.01 , 0 , 0 n = 61" [1] "1306 Valve transient for LT after Line 1 = 0.39 , 0.36 , 0.28 , 0.2 , 0.13 n = 1" [1] "1306 Valve transient for LT after HS = -0.87 , -0.26 , 0.33 , 0.27 , 0.22 n = 19" [1] "1306 Valve transient for LT after LS = 0.6 , 0.48 , 0.33 , 0.28 , 0.23 n = 17" [1] "Plotting calibration sds and slopes" [1] "Plotting calibration parameters" [1] "Plotting calibration data" [1] "1150 out of 10440 remaining 1-min values OK w abs(diffback+difffwd)/2 < 0.2 and difference from interpolated clean < 0.2 ppm" [1] "9290 out of 39635 1-min values rejected as stack air" [1] "7255 out of 33107 Line 1 1-min values rejected as stack air" [1] "2035 out of 6528 Line 2 1-min values rejected as stack air" [1] "JGOFS data found" [1] "LOXY data found" [1] "LMG1306loxy.d152" [1] "LMG1306loxy.d153" [1] "LMG1306loxy.d154" [1] "LMG1306loxy.d155" [1] "LMG1306loxy.d156" [1] "LMG1306loxy.d157" [1] "LMG1306loxy.d158" [1] "LMG1306loxy.d159" [1] "LMG1306loxy.d162" [1] "LMG1306loxy.d163" [1] "LMG1306loxy.d164" [1] "LMG1306loxy.d165" [1] "LMG1306loxy.d166" [1] "LMG1306loxy.d183" [1] "LMG1306loxy.d184" [1] "LMG1306loxy.d185" [1] "LMG1306loxy.d186" [1] "calculating wind bins" [1] "aggregating 10 min SDs" [1] "aggregating O2s" [1] "calculating anomalous O2s" [1] "aggregating anomalous O2s" [1] "aggregating anomalous O2s diurnally" [,1] [,2] [1,] 92.5 0.59760956 [2,] 97.5 0.69721116 [3,] 102.5 0.79681275 [4,] 107.5 0.69721116 [5,] 112.5 0.24900398 [6,] 117.5 0.24900398 [7,] 122.5 0.24900398 [8,] 127.5 0.24900398 [9,] 132.5 0.44820717 [10,] 137.5 0.24900398 [11,] 142.5 0.34860558 [12,] 147.5 0.24900398 [13,] 152.5 0.39840637 [14,] 157.5 0.24900398 [15,] 162.5 0.19920319 [16,] 172.5 0.29880478 [17,] 177.5 0.04980080 [18,] 182.5 0.34860558 [19,] 187.5 0.24900398 [20,] 192.5 0.19920319 [21,] 197.5 0.34860558 [22,] 202.5 0.34860558 [23,] 207.5 0.44820717 [24,] 212.5 0.59760956 [25,] 217.5 0.59760956 [26,] 222.5 0.79681275 [27,] 227.5 0.64741036 [28,] 232.5 0.54780876 [29,] 237.5 0.64741036 [30,] 242.5 0.19920319 [31,] 247.5 0.24900398 [32,] 252.5 0.39840637 [33,] 257.5 0.39840637 [34,] 262.5 0.24900398 [35,] 267.5 0.24900398 [36,] 272.5 0.24900398 [37,] 277.5 0.09960159 [38,] 282.5 0.09960159 [39,] 287.5 0.29880478 [40,] 292.5 0.09960159 [41,] 297.5 0.34860558 [42,] 302.5 0.24900398 [43,] 307.5 0.44820717 [44,] 312.5 0.19920319 [45,] 317.5 0.24900398 [46,] 322.5 0.44820717 [47,] 327.5 0.34860558 [48,] 332.5 0.54780876 [49,] 337.5 0.84661355 [50,] 342.5 0.74701195 [51,] 347.5 1.04581673 [52,] 352.5 0.79681275 [53,] 357.5 0.94621514 [54,] 362.5 0.49800797 [55,] 367.5 1.14541833 [56,] 372.5 0.44820717 [57,] 377.5 0.64741036 [58,] 382.5 0.34860558 [59,] 387.5 1.09561753 [60,] 392.5 1.24501992 [61,] 397.5 1.34462151 [62,] 402.5 0.49800797 [63,] 407.5 0.59760956 [64,] 412.5 0.34860558 [65,] 417.5 0.24900398 [66,] 422.5 0.09960159 [67,] 427.5 0.44820717 [68,] 432.5 0.89641434 [69,] 437.5 0.89641434 [70,] 442.5 0.84661355 [71,] 447.5 0.14940239 [,1] [,2] [1,] 92.5 0.39840637 [2,] 97.5 0.59760956 [3,] 102.5 0.64741036 [4,] 107.5 0.94621514 [5,] 112.5 0.64741036 [6,] 117.5 0.69721116 [7,] 122.5 0.44820717 [8,] 127.5 0.19920319 [9,] 132.5 0.09960159 [10,] 137.5 0.14940239 [11,] 142.5 0.19920319 [12,] 147.5 0.04980080 [13,] 152.5 0.19920319 [14,] 167.5 0.09960159 [15,] 172.5 0.09960159 [16,] 177.5 0.04980080 [17,] 182.5 0.04980080 [18,] 187.5 0.09960159 [19,] 192.5 0.24900398 [20,] 197.5 0.49800797 [21,] 202.5 0.89641434 [22,] 207.5 0.99601594 [23,] 212.5 1.84262948 [24,] 217.5 2.58964143 [25,] 222.5 2.14143426 [26,] 227.5 1.54382470 [27,] 232.5 1.44422311 [28,] 237.5 1.49402390 [29,] 242.5 0.94621514 [30,] 247.5 0.59760956 [31,] 252.5 0.64741036 [32,] 257.5 0.39840637 [33,] 262.5 0.39840637 [34,] 267.5 0.29880478 [35,] 272.5 0.44820717 [36,] 277.5 0.24900398 [37,] 282.5 0.14940239 [38,] 287.5 0.44820717 [39,] 292.5 0.34860558 [40,] 297.5 0.24900398 [41,] 302.5 0.14940239 [42,] 307.5 0.04980080 [43,] 312.5 0.04980080 [44,] 317.5 0.24900398 [45,] 322.5 0.09960159 [46,] 327.5 0.24900398 [47,] 332.5 0.14940239 [48,] 337.5 0.14940239 [49,] 342.5 0.44820717 [50,] 347.5 0.59760956 [51,] 352.5 0.49800797 [52,] 357.5 0.29880478 [53,] 362.5 0.59760956 [54,] 367.5 0.64741036 [55,] 372.5 0.29880478 [56,] 377.5 0.49800797 [57,] 382.5 0.24900398 [58,] 387.5 0.29880478 [59,] 392.5 0.44820717 [60,] 397.5 0.34860558 [61,] 407.5 0.04980080 [62,] 412.5 0.09960159 [63,] 417.5 0.09960159 [64,] 422.5 0.29880478 [65,] 427.5 0.19920319 [66,] 432.5 0.64741036 [67,] 437.5 0.49800797 [68,] 442.5 0.69721116 [69,] 447.5 0.39840637 [,1] [,2] [1,] 92.5 0.19920319 [2,] 97.5 0.14940239 [3,] 102.5 0.19920319 [4,] 107.5 0.39840637 [5,] 112.5 0.29880478 [6,] 117.5 0.19920319 [7,] 122.5 0.04980080 [8,] 127.5 0.04980080 [9,] 132.5 0.09960159 [10,] 137.5 0.04980080 [11,] 142.5 0.04980080 [12,] 182.5 0.09960159 [13,] 187.5 0.14940239 [14,] 192.5 0.04980080 [15,] 197.5 0.49800797 [16,] 202.5 0.79681275 [17,] 207.5 0.99601594 [18,] 212.5 0.74701195 [19,] 217.5 1.54382470 [20,] 222.5 0.79681275 [21,] 227.5 0.24900398 [22,] 232.5 0.34860558 [23,] 237.5 0.24900398 [24,] 242.5 0.14940239 [25,] 247.5 0.04980080 [26,] 252.5 0.19920319 [27,] 257.5 0.09960159 [28,] 262.5 0.04980080 [29,] 267.5 0.09960159 [30,] 272.5 0.04980080 [31,] 277.5 0.09960159 [32,] 282.5 0.24900398 [33,] 287.5 0.09960159 [34,] 292.5 0.04980080 [35,] 297.5 0.29880478 [36,] 302.5 0.09960159 [37,] 307.5 0.14940239 [38,] 312.5 0.14940239 [39,] 317.5 0.04980080 [40,] 322.5 0.14940239 [41,] 327.5 0.14940239 [42,] 332.5 0.14940239 [43,] 337.5 0.64741036 [44,] 342.5 0.34860558 [45,] 347.5 0.29880478 [46,] 352.5 0.44820717 [47,] 357.5 0.74701195 [48,] 362.5 0.34860558 [49,] 367.5 0.49800797 [50,] 372.5 0.89641434 [51,] 377.5 0.74701195 [52,] 382.5 0.79681275 [53,] 387.5 0.59760956 [54,] 392.5 0.24900398 [55,] 397.5 0.24900398 [56,] 402.5 0.29880478 [57,] 407.5 0.00000000 [58,] 412.5 0.09960159 [59,] 417.5 0.04980080 [60,] 422.5 0.09960159 [61,] 427.5 0.14940239 [62,] 432.5 0.24900398 [,1] [,2] [1,] 92.5 0.19920319 [2,] 97.5 0.24900398 [3,] 102.5 0.29880478 [4,] 112.5 0.04980080 [5,] 132.5 0.04980080 [6,] 137.5 0.04980080 [7,] 202.5 0.04980080 [8,] 247.5 0.04980080 [9,] 252.5 0.14940239 [10,] 257.5 0.09960159 [11,] 262.5 0.14940239 [12,] 267.5 0.09960159 [13,] 272.5 0.24900398 [14,] 277.5 0.09960159 [15,] 282.5 0.14940239 [16,] 292.5 0.24900398 [17,] 297.5 0.39840637 [18,] 302.5 0.09960159 [19,] 307.5 0.04980080 [20,] 312.5 0.14940239 [21,] 317.5 0.04980080 [22,] 332.5 0.44820717 [23,] 337.5 1.29482072 [24,] 342.5 0.69721116 [25,] 347.5 0.39840637 [26,] 352.5 0.34860558 [27,] 357.5 0.29880478 [28,] 362.5 0.59760956 [29,] 367.5 0.64741036 [30,] 372.5 0.84661355 [31,] 377.5 1.69322709 [32,] 382.5 1.74302789 [33,] 387.5 1.04581673 [34,] 392.5 0.39840637 [35,] 402.5 0.04980080 [36,] 407.5 0.04980080 [37,] 422.5 0.04980080 [38,] 427.5 0.14940239 [39,] 432.5 0.04980080 [40,] 442.5 0.04980080 [41,] 447.5 0.09960159 [1] "making cruise html" [1] "2025-04-29 19:17:42 MDT" [1] "plotting cyl pressures" [1] "LMG" [1] "making time-series html" [1] "making latitude gradient html" [1] "making html"