[1] "2017-04-05 22:34:49 MDT"
[1] "1213A"
[1] "reading in daily output files:"
 [1] "/net/www/docs/homes/stephens/GO2/1213A/121211.html"   
 [2] "/net/www/docs/homes/stephens/GO2/1213A/121212.html"   
 [3] "/net/www/docs/homes/stephens/GO2/1213A/121213.html"   
 [4] "/net/www/docs/homes/stephens/GO2/1213A/121214.html"   
 [5] "/net/www/docs/homes/stephens/GO2/1213A/121217.html"   
 [6] "/net/www/docs/homes/stephens/GO2/1213A/121218.html"   
 [7] "/net/www/docs/homes/stephens/GO2/1213A/121219.html"   
 [8] "/net/www/docs/homes/stephens/GO2/1213A/121220.html"   
 [9] "/net/www/docs/homes/stephens/GO2/1213A/121221.html"   
[10] "/net/www/docs/homes/stephens/GO2/1213A/121222.html"   
[11] "/net/www/docs/homes/stephens/GO2/1213A/121223.html"   
[12] "/net/www/docs/homes/stephens/GO2/1213A/lmg_1213A.html"
 [1] "/net/www/docs/homes/stephens/GO2/1213A/121211.html"
 [2] "/net/www/docs/homes/stephens/GO2/1213A/121212.html"
 [3] "/net/www/docs/homes/stephens/GO2/1213A/121213.html"
 [4] "/net/www/docs/homes/stephens/GO2/1213A/121214.html"
 [5] "/net/www/docs/homes/stephens/GO2/1213A/121217.html"
 [6] "/net/www/docs/homes/stephens/GO2/1213A/121218.html"
 [7] "/net/www/docs/homes/stephens/GO2/1213A/121219.html"
 [8] "/net/www/docs/homes/stephens/GO2/1213A/121220.html"
 [9] "/net/www/docs/homes/stephens/GO2/1213A/121221.html"
[10] "/net/www/docs/homes/stephens/GO2/1213A/121222.html"
[11] "/net/www/docs/homes/stephens/GO2/1213A/121223.html"
[1] "121211" "121223"
 [1] "121211" "121212" "121213" "121214" "121217" "121218" "121219" "121220"
 [9] "121221" "121222" "121223"
[1] "000000" "999999"
[1] "121211_mr_proc.txt, 121211_cal_periods.txt, 121211_cal_param.txt,806jogs"
[1] "121212_mr_proc.txt, 121212_cal_periods.txt, 121212_cal_param.txt,1160jogs"
[1] "121213_mr_proc.txt, 121213_cal_periods.txt, 121213_cal_param.txt,1424jogs"
[1] "121214_mr_proc.txt, 121214_cal_periods.txt, 121214_cal_param.txt,970jogs"
[1] "121217_mr_proc.txt, 121217_cal_periods.txt, 121217_cal_param.txt,812jogs"
[1] "121218_mr_proc.txt, 121218_cal_periods.txt, 121218_cal_param.txt,1430jogs"
[1] "121219_mr_proc.txt, 121219_cal_periods.txt, 121219_cal_param.txt,1411jogs"
[1] "121220_mr_proc.txt, 121220_cal_periods.txt, 121220_cal_param.txt,1378jogs"
[1] "121221_mr_proc.txt, 121221_cal_periods.txt, 121221_cal_param.txt,1426jogs"
[1] "121222_mr_proc.txt, 121222_cal_periods.txt, 121222_cal_param.txt,319jogs"
[1] "121223_mr_proc.txt, 121223_cal_periods.txt, 121223_cal_param.txt,1243jogs"
[1] "121211" "121223" "d346"   "d358"  
[1] "Calculating derived concentration values"
[1] "2017-04-05 22:35:03 MDT"
[1] "o2scaleopt = wt, ave o2scale1 = 0.765, ave o2scale2 = 0.773"
[1] "redoing deltadiff calc"
[1] "reading in medium-rate plot titles"
[1] "Plotting 1-minute data"
[1] "2017-04-05 22:35:12 MDT"
[1] "Plotting O2 and CO2 concentration data"
[1] "2017-04-05 22:35:29 MDT"
[1] "2017-04-05 22:35:33 MDT"
[1] "Reading in cylinder log"
Read 68 records
[1] "Finding cylinder IDs"
Read 420 records
[1] "position 1 cylinder CB08910 description: HS CO2 = 374.15 O2 = -454.5"
[1] "position 2 cylinder CB08905 description: MS CO2 = 394.77 O2 = -549.6"
[1] "position 3 cylinder CB08911 description: LS CO2 = 405.13 O2 = -633.3"
[1] "position 4 cylinder CC332564 description: LT CO2 = 393.88 O2 = -579"
[1] "position 5 cylinder CB09982 description: WT1 CO2 = 479.15 O2 = -1145.4"
[1] "position 6 cylinder CA07554 description: WT2 CO2 = NA O2 = NA"
[1] "Plotting jog shapes"
[1] "1213A Valve transient for  Line 1 after Line 2 = 1.07 , 0.63 , -0.32 , -0.87 , -0.91 n = 2"
[1] "1213A Valve transient for  Line 1 after Cal = 0.1 , 0.17 , 0.08 , 0.09 , 0.13 n = 39"
[1] "1213A Valve transient for  Line 2 after Line 1 = -0.8 , -0.41 , 0.15 , 0.13 , -0.25 n = 1"
[1] "1213A Valve transient for  Line 2 after Cal = -1.7 , -1.56 , -1.14 , -0.91 , -1.01 n = 1"
[1] "1213A Valve transient for  Line 1 after HS = -1.27 , -0.67 , -0.05 , -0.04 , -0.03 n = 12"
[1] "1213A Valve transient for  Line 1 after MS = 0.32 , 0.18 , 0.05 , 0.09 , 0.13 n = 17"
[1] "1213A Valve transient for  Line 1 after LT = 0.21 , 1.41 , 3.7 , 3.44 , 2.82 n = 10"
[1] "1213A Valve transient for  Line 2 after MS = -1.7 , -1.56 , -1.14 , -0.91 , -1.01 n = 1"
[1] "1213A Valve transient for  HS after Line 1 = 1.08 , 0.54 , 0 , 0 , -0.01 n = 17"
[1] "1213A Valve transient for  HS after LS = 5.25 , 2.64 , 0.01 , 0 , 0 n = 20"
[1] "1213A Valve transient for  MS after LS = 1.71 , 0.85 , -0.01 , -0.01 , 0 n = 13"
[1] "1213A Valve transient for  MS after LT = 0.75 , 0.37 , -0.01 , -0.01 , 0 n = 3"
[1] "1213A Valve transient for  LS after Line 1 = -1.83 , -0.91 , 0 , 0.01 , 0.01 n = 19"
[1] "1213A Valve transient for  LS after HS = -5.07 , -2.55 , -0.01 , 0 , 0 n = 17"
[1] "1213A Valve transient for  LT after HS = -1.82 , -1.11 , -0.36 , -0.29 , -0.22 n = 7"
[1] "1213A Valve transient for  LT after LS = 1.41 , 0.79 , 0.16 , 0.14 , 0.13 n = 3"
[1] "Plotting calibration sds and slopes"
[1] "Plotting calibration parameters"
[1] "Plotting calibration data"
[1] "281 out of 1644 remaining 1-min values OK w abs(diffback+difffwd)/2 < 0.2 and difference from interpolated clean < 0.2 ppm"
[1] "1363 out of 10774 1-min values rejected as stack air"
[1] "1269 out of 10643 Line 1 1-min values rejected as stack air"
[1] "94 out of 131 Line 2 1-min values rejected as stack air"
[1] "JGOFS data found"
[1] "LOXY data found"
[1] "LMG1213Aloxy.d346"
[1] "LMG1213Aloxy.d347"
[1] "LMG1213Aloxy.d348"
[1] "LMG1213Aloxy.d349"
[1] "LMG1213Aloxy.d350"
[1] "LMG1213Aloxy.d351"
[1] "LMG1213Aloxy.d352"
[1] "LMG1213Aloxy.d353"
[1] "LMG1213Aloxy.d354"
[1] "LMG1213Aloxy.d355"
[1] "LMG1213Aloxy.d356"
[1] "LMG1213Aloxy.d357"
[1] "LMG1213Aloxy.d358"
[1] "calculating wind bins"
[1] "aggregating 10 min SDs"
[1] "aggregating O2s"
[1] "calculating anomalous O2s"
[1] "aggregating anomalous O2s"
[1] "aggregating anomalous O2s diurnally"
       [,1]       [,2]
 [1,]  92.5  1.8348624
 [2,] 107.5  0.9174312
 [3,] 127.5  0.9174312
 [4,] 132.5  0.9174312
 [5,] 137.5  1.8348624
 [6,] 142.5  0.9174312
 [7,] 147.5  0.9174312
 [8,] 152.5  0.9174312
 [9,] 157.5  0.9174312
[10,] 162.5  2.7522936
[11,] 167.5  0.9174312
[12,] 177.5  5.5045872
[13,] 182.5  8.2568807
[14,] 187.5  5.5045872
[15,] 192.5  5.5045872
[16,] 197.5  4.5871560
[17,] 202.5  1.8348624
[18,] 207.5  2.7522936
[19,] 222.5  1.8348624
[20,] 307.5  0.9174312
[21,] 312.5  0.9174312
[22,] 327.5  0.9174312
[23,] 332.5  0.9174312
[24,] 352.5  0.9174312
[25,] 362.5  0.9174312
[26,] 367.5  0.9174312
[27,] 372.5  0.9174312
[28,] 377.5  1.8348624
[29,] 382.5  3.6697248
[30,] 387.5  1.8348624
[31,] 392.5  5.5045872
[32,] 397.5  7.3394495
[33,] 402.5 10.0917431
[34,] 407.5  4.5871560
[35,] 412.5  2.7522936
[36,] 417.5  1.8348624
      [,1]      [,2]
[1,] 182.5 0.9174312
[2,] 197.5 0.9174312
[3,] 217.5 0.9174312
[4,] 292.5 0.9174312
     [,1] [,2]
     [,1] [,2]
[1] "making cruise html"
[1] "2017-04-05 22:35:59 MDT"
[1] "plotting cyl pressures"
[1] "LMG"
[1] "making time-series html"
[1] "making latitude gradient html"
[1] "making html"