Read 20400 records
[1] "Analyzing  /scr/raf/stephens/CFDAT/171205a.mr"
[1] "Reading in data"
Read 5100 records
[1] "Approximately  34  jogs"
[1] "Fixing CO2 glitches"
Read 5100 records
[1] "Finding cylinder IDs"
[1] "Position  1    Cylinder  CA07288"
[1] "Position  2    Cylinder  OK30769"
[1] "Position  3    Cylinder  CA07280"
[1] "Position  4    Cylinder  CA07299"
[1] "Position  5    Cylinder  NA"
[1] "Position  6    Cylinder  CA07260"
[1] "Position  7    Cylinder  NA"
[1] "Position  8    Cylinder  CC332564"
[1] "Position  9    Cylinder  CB08910"
[1] "Position  10    Cylinder  CA07276"
[1] "Position  11    Cylinder  CB10260"
[1] "Position  12    Cylinder  CB08911"
[1] "Position  13    Cylinder  JA02385"
Read 13 records
LIST_KNOWN: CA07288 CA07280 CA07299 CA07260 CA07276 
LIST_UNKNOWN: CA07288 CA07280 CA07299 CA07260 CC332564 CB08910 CA07276 CB08911 
Read 171 records
Read 54 records
Read 536 records
Read 2 items
[1] "Processing jog 1 at position 1"
[1] "Processing jog 2 at position 151"
[1] "Processing jog 3 at position 301"
[1] "Processing jog 4 at position 451"
[1] "Processing jog 5 at position 601"
[1] "Processing jog 6 at position 751"
[1] "Processing jog 7 at position 901"
[1] "Processing jog 8 at position 1051"
[1] "Processing jog 9 at position 1201"
[1] "Processing jog 10 at position 1351"
[1] "Processing jog 11 at position 1501"
[1] "Processing jog 12 at position 1651"
[1] "Processing jog 13 at position 1801"
[1] "Processing jog 14 at position 1951"
[1] "Processing jog 15 at position 2101"
[1] "Processing jog 16 at position 2251"
[1] "Processing jog 17 at position 2401"
[1] "Processing jog 18 at position 2551"
[1] "Processing jog 19 at position 2701"
[1] "Processing jog 20 at position 2851"
[1] "Processing jog 21 at position 3001"
[1] "Processing jog 22 at position 3151"
[1] "Processing jog 23 at position 3301"
[1] "Processing jog 24 at position 3451"
[1] "Processing jog 25 at position 3601"
[1] "Processing jog 26 at position 3751"
[1] "Processing jog 27 at position 3901"
[1] "Processing jog 28 at position 4051"
[1] "Processing jog 29 at position 4201"
[1] "Processing jog 30 at position 4351"
[1] "Processing jog 31 at position 4501"
[1] "Processing jog 32 at position 4651"
[1] "Processing jog 33 at position 4801"
[1] "Processing jog 34 at position 4951"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)"
                                 x2       x1                x2       x1 
   6.041    0.000    0.000    1.085  503.534 -504.012    1.078  503.276 
         
-504.082 
[1] "calculating fits"
[1] "plotting CO2 cal parameters"
[1] "calculating final numbers"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)"
[1]    6.041    0.000      NaN    1.078  503.359 -495.043    1.071  503.103
[9] -495.534
[1] "plotting CO2 timeseries"
[1] "plotting CO2 flushing effect"
[1] "plotting unknown co2"
[1] "plotting known co2"
[1] "plotting all variables"
[1] "plotting standard deviations"
[1] "plotting slopes"
[1] "plotting CO2 fits"
[1] "calculating switching times"
[1] "plotting co2 switching times"
[1] "plotting co2 rollover"
[1] "plotting co2 results"
[1] "plotting average residuals"
[1] "making html"
[1] "making index html"