Read 19156 records
[1] "Analyzing  /scr/raf/stephens/CFDAT/140725z.mr"
[1] "Reading in data"
Read 4789 records
[1] "Approximately  21  jogs"
[1] "Fixing CO2 glitches"
Read 4789 records
[1] "Finding cylinder IDs"
[1] "Position  1    Cylinder  CB10141"
[1] "Position  2    Cylinder  ND19517"
[1] "Position  3    Cylinder  CC161540"
[1] "Position  4    Cylinder  CB10128"
[1] "Position  5    Cylinder  ND19681"
[1] "Position  6    Cylinder  CB10144"
[1] "Position  7    Cylinder  ND19529"
[1] "Position  8    Cylinder  ND19273"
[1] "Position  9    Cylinder  CB10260"
[1] "Position  10    Cylinder  ND20050"
[1] "Position  11    Cylinder  CC129295"
[1] "Position  12    Cylinder  ND20887"
[1] "Position  13    Cylinder  OK30057"
Read 13 records
LIST_KNOWN: ND19517 ND19681 ND19529 ND19273 ND20050 ND20887 
LIST_UNKNOWN: CB10141 CC161540 CB10128 CB10144 CB10260 CC129295 
Read 171 records
Read 54 records
Read 536 records
Read 2 items
[1] "Skipping final  64  records."
[1] "Processing jog 1 at position 1"
[1] "Processing jog 2 at position 226"
[1] "Processing jog 3 at position 451"
[1] "Processing jog 4 at position 676"
[1] "Processing jog 5 at position 901"
[1] "Processing jog 6 at position 1126"
[1] "Processing jog 7 at position 1351"
[1] "Processing jog 8 at position 1576"
[1] "Processing jog 9 at position 1801"
[1] "Processing jog 10 at position 2026"
[1] "Processing jog 11 at position 2251"
[1] "Processing jog 12 at position 2476"
[1] "Processing jog 13 at position 2701"
[1] "Processing jog 14 at position 2926"
[1] "Processing jog 15 at position 3151"
[1] "Processing jog 16 at position 3376"
[1] "Processing jog 17 at position 3601"
[1] "Processing jog 18 at position 3826"
[1] "Processing jog 19 at position 4051"
[1] "Processing jog 20 at position 4276"
[1] "Processing jog 21 at position 4501"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)"
        X Intercept                  x2        x1                  x2        x1 
   -0.675 -1084.674 -4669.718     0.895   415.164  -417.464     0.894   415.241 
          
 -417.488 
[1] "Screened jogs for high CO2 standard deviation:"
           [,1] [,2]         [,3]
[1,] 206.617610    6 0.0500819961
[2,] 206.633458    9 0.0427991968
[3,] 206.638769   10 0.0541915855
[4,] 206.670719    9 0.0206230560
[5,] 206.686714    6 0.0461956598
[1] "Screened jogs for high O2 standard deviation:"
           [,1] [,2]        [,3]
[1,] 206.591332    1  69.9723152
[2,] 206.654726   12  16.9336978
[3,] 206.665388   10  11.3304680
[4,] 206.670719    9 265.1367797
[1] "calculating fits"
[1] "plotting CO2 cal parameters"
[1] "plotting O2 cal parameters"
[1] "calculating final numbers"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)"
[1]    -0.675 -1084.695  -350.075     0.895   415.183  -415.830     0.894
[8]   415.260  -415.915
[1] "plotting CO2 timeseries"
[1] "plotting O2 timeseries"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 1"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 2"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 3"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 4"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 5"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 6"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 7"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 8"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 9"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 10"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 11"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 12"
[1] "plotting unknown co2"
[1] "plotting unknown o2"
[1] "plotting known co2"
[1] "plotting known o2"
[1] "plotting all variables"
[1] "plotting SP-WT slope correction"
[1] "plotting standard deviations"
[1] "plotting slopes"
[1] "plotting CO2 fits"
[1] "plotting O2 fits"
[1] "calculating switching times"
[1] "plotting co2 switching times"
[1] "plotting co2 rollover"
[1] "plotting o2 switching times"
[1] "plotting o2 rollover"
[1] "plotting co2 results"
[1] "plotting o2 results"
[1] "plotting average residuals"
[1] "making html"
[1] "making index html"