Read 80829 records
[1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH"
[1] "LINE MISMATCH AT  732"
[1] "LINE MISMATCH AT  1632"
[1] "LINE MISMATCH AT  2532"
[1] "LINE MISMATCH AT  3432"
[1] "LINE MISMATCH AT  4332"
[1] "LINE MISMATCH AT  5232"
[1] "LINE MISMATCH AT  6132"
[1] "LINE MISMATCH AT  7032"
[1] "LINE MISMATCH AT  7932"
[1] "LINE MISMATCH AT  8832"
[1] "LINE MISMATCH AT  9732"
[1] "LINE MISMATCH AT  10632"
[1] "LINE MISMATCH AT  12432"
[1] "LINE MISMATCH AT  13332"
[1] "LINE MISMATCH AT  14232"
[1] "LINE MISMATCH AT  15132"
[1] "LINE MISMATCH AT  16032"
[1] "LINE MISMATCH AT  16932"
[1] "LINE MISMATCH AT  17832"
[1] "LINE MISMATCH AT  18732"
[1] "LINE MISMATCH AT  19632"
[1] "LINE MISMATCH AT  20532"
[1] "LINE MISMATCH AT  22332"
[1] "LINE MISMATCH AT  23232"
[1] "LINE MISMATCH AT  24132"
[1] "LINE MISMATCH AT  25032"
[1] "LINE MISMATCH AT  25932"
[1] "LINE MISMATCH AT  26832"
[1] "LINE MISMATCH AT  27732"
[1] "LINE MISMATCH AT  28632"
[1] "LINE MISMATCH AT  29532"
[1] "LINE MISMATCH AT  30432"
[1] "LINE MISMATCH AT  32232"
[1] "LINE MISMATCH AT  33132"
[1] "LINE MISMATCH AT  34032"
[1] "LINE MISMATCH AT  34932"
[1] "LINE MISMATCH AT  35832"
[1] "LINE MISMATCH AT  36732"
[1] "LINE MISMATCH AT  37632"
[1] "LINE MISMATCH AT  38532"
[1] "LINE MISMATCH AT  39432"
[1] "LINE MISMATCH AT  40332"
[1] "LINE MISMATCH AT  42132"
[1] "LINE MISMATCH AT  43032"
[1] "LINE MISMATCH AT  43932"
[1] "LINE MISMATCH AT  44832"
[1] "LINE MISMATCH AT  45732"
[1] "LINE MISMATCH AT  46632"
[1] "LINE MISMATCH AT  47532"
[1] "LINE MISMATCH AT  48432"
[1] "LINE MISMATCH AT  49332"
[1] "LINE MISMATCH AT  50232"
[1] "LINE MISMATCH AT  52032"
[1] "LINE MISMATCH AT  52932"
[1] "LINE MISMATCH AT  53832"
[1] "LINE MISMATCH AT  54732"
[1] "LINE MISMATCH AT  55632"
[1] "LINE MISMATCH AT  56532"
[1] "LINE MISMATCH AT  57432"
[1] "LINE MISMATCH AT  58332"
[1] "LINE MISMATCH AT  59232"
[1] "LINE MISMATCH AT  60132"
[1] "LINE MISMATCH AT  61932"
[1] "LINE MISMATCH AT  62832"
[1] "LINE MISMATCH AT  63732"
[1] "LINE MISMATCH AT  64632"
[1] "LINE MISMATCH AT  65532"
[1] "LINE MISMATCH AT  66432"
[1] "LINE MISMATCH AT  67332"
[1] "LINE MISMATCH AT  68232"
[1] "LINE MISMATCH AT  69132"
[1] "LINE MISMATCH AT  70032"
[1] "LINE MISMATCH AT  71832"
[1] "LINE MISMATCH AT  72732"
[1] "LINE MISMATCH AT  73632"
[1] "LINE MISMATCH AT  74532"
[1] "LINE MISMATCH AT  75432"
[1] "LINE MISMATCH AT  76332"
[1] "LINE MISMATCH AT  77232"
[1] "LINE MISMATCH AT  78132"
[1] "LINE MISMATCH AT  79032"
[1] "LINE MISMATCH AT  79932"
[1] "Analyzing  /scr/raf/stephens/CFDAT/130903a.mr"
[1] "Reading in data"
Read 20207 records
[1] "Approximately  90  jogs"
[1] "Fixing CO2 glitches"
Read 20207 records
[1] "MAX TIME DIFFERENCE  31.276799999614  SECONDS"
[1] "MAX CO2 DIFFERENCE  24.418  PPM"
[1] "Finding cylinder IDs"
[1] "Position  1    Cylinder  CA07280"
[1] "Position  2    Cylinder  CA07276"
[1] "Position  3    Cylinder  CB10191"
[1] "Position  4    Cylinder  CA07288"
[1] "Position  5    Cylinder  FA02360"
[1] "Position  6    Cylinder  CA07260"
[1] "Position  7    Cylinder  CB10219"
[1] "Position  8    Cylinder  FA02374"
[1] "Position  9    Cylinder  CA07299"
[1] "Position  10    Cylinder  NA"
[1] "Position  11    Cylinder  CB10273"
[1] "Position  12    Cylinder  CB10275"
[1] "Position  13    Cylinder  NA"
Read 13 records
LIST_KNOWN: CA07280 CA07276 CA07288 CA07260 CA07299 
LIST_UNKNOWN: CB10191 FA02360 CB10219 FA02374 CB10273 CB10275 
Read 171 records
Read 54 records
Read 536 records
Read 2 items
[1] "Skipping initial  182  records."
[1] "Processing jog 1 at position 183"
[1] "Processing jog 2 at position 408"
[1] "Processing jog 3 at position 633"
[1] "Processing jog 4 at position 858"
[1] "Processing jog 5 at position 1083"
[1] "Processing jog 6 at position 1308"
[1] "Processing jog 7 at position 1533"
[1] "Processing jog 8 at position 1758"
[1] "Processing jog 9 at position 1983"
[1] "Processing jog 10 at position 2208"
[1] "Processing jog 11 at position 2433"
[1] "Processing jog 12 at position 2658"
[1] "Processing jog 13 at position 2883"
[1] "Processing jog 14 at position 3108"
[1] "Processing jog 15 at position 3333"
[1] "Processing jog 16 at position 3558"
[1] "Processing jog 17 at position 3783"
[1] "Processing jog 18 at position 4008"
[1] "Processing jog 19 at position 4233"
[1] "Processing jog 20 at position 4458"
[1] "Processing jog 21 at position 4683"
[1] "Processing jog 22 at position 4908"
[1] "Processing jog 23 at position 5133"
[1] "Processing jog 24 at position 5358"
[1] "Processing jog 25 at position 5583"
[1] "Processing jog 26 at position 5808"
[1] "Processing jog 27 at position 6033"
[1] "Processing jog 28 at position 6258"
[1] "Processing jog 29 at position 6483"
[1] "Processing jog 30 at position 6708"
[1] "Processing jog 31 at position 6933"
[1] "Processing jog 32 at position 7158"
[1] "Processing jog 33 at position 7383"
[1] "Processing jog 34 at position 7608"
[1] "Processing jog 35 at position 7833"
[1] "Processing jog 36 at position 8058"
[1] "Processing jog 37 at position 8283"
[1] "Processing jog 38 at position 8508"
[1] "Processing jog 39 at position 8733"
[1] "Processing jog 40 at position 8958"
[1] "Processing jog 41 at position 9183"
[1] "Processing jog 42 at position 9408"
[1] "Processing jog 43 at position 9633"
[1] "Processing jog 44 at position 9858"
[1] "Processing jog 45 at position 10083"
[1] "Processing jog 46 at position 10308"
[1] "Processing jog 47 at position 10533"
[1] "Processing jog 48 at position 10758"
[1] "Processing jog 49 at position 10983"
[1] "Processing jog 50 at position 11208"
[1] "Processing jog 51 at position 11433"
[1] "Processing jog 52 at position 11658"
[1] "Processing jog 53 at position 11883"
[1] "Processing jog 54 at position 12108"
[1] "Processing jog 55 at position 12333"
[1] "Processing jog 56 at position 12558"
[1] "Processing jog 57 at position 12783"
[1] "Processing jog 58 at position 13008"
[1] "Processing jog 59 at position 13233"
[1] "Processing jog 60 at position 13458"
[1] "Processing jog 61 at position 13683"
[1] "Processing jog 62 at position 13908"
[1] "Processing jog 63 at position 14133"
[1] "Processing jog 64 at position 14358"
[1] "Processing jog 65 at position 14583"
[1] "Processing jog 66 at position 14808"
[1] "Processing jog 67 at position 15033"
[1] "Processing jog 68 at position 15258"
[1] "Processing jog 69 at position 15483"
[1] "Processing jog 70 at position 15708"
[1] "Processing jog 71 at position 15933"
[1] "Processing jog 72 at position 16158"
[1] "Processing jog 73 at position 16383"
[1] "Processing jog 74 at position 16608"
[1] "Processing jog 75 at position 16833"
[1] "Processing jog 76 at position 17058"
[1] "Processing jog 77 at position 17283"
[1] "Processing jog 78 at position 17508"
[1] "Processing jog 79 at position 17733"
[1] "Processing jog 80 at position 17958"
[1] "Processing jog 81 at position 18183"
[1] "Processing jog 82 at position 18408"
[1] "Processing jog 83 at position 18633"
[1] "Processing jog 84 at position 18858"
[1] "Processing jog 85 at position 19083"
[1] "Processing jog 86 at position 19308"
[1] "Processing jog 87 at position 19533"
[1] "Processing jog 88 at position 19758"
[1] "Processing jog 89 at position 19983"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)"
                                 x2       x1                x2       x1 
   6.041    0.000    0.000    0.906  385.713 -385.458    0.905  385.828 
         
-385.528 
[1] "Screened jogs for high CO2 standard deviation:"
           [,1] [,2]         [,3]
[1,] 246.736515    5 0.0245148370
[2,] 246.768098   12 0.0230220143
[3,] 246.904701    9 0.0204533786
[4,] 247.094243    1 0.0209546874
[5,] 247.209908    1 0.0225114800
[1] "calculating fits"
[1] "plotting CO2 cal parameters"
[1] "calculating final numbers"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)"
[1]    6.041    0.000   -1.574    0.906  385.709 -384.593    0.905  385.824
[9] -384.699
[1] "plotting CO2 timeseries"
[1] "plotting CO2 flushing effect"
[1] "plotting unknown co2"
[1] "plotting known co2"
[1] "plotting all variables"
[1] "plotting standard deviations"
[1] "plotting slopes"
[1] "plotting CO2 fits"
[1] "calculating switching times"
[1] "plotting co2 switching times"
[1] "plotting co2 rollover"
[1] "plotting co2 results"
[1] "plotting average residuals"
[1] "making html"
[1] "making index html"