Read 124428 records [1] "Analyzing /scr/raf/stephens/CFDAT/130318z.mr" [1] "Reading in data" Read 31107 records [1] "Approximately 138 jogs" [1] "Fixing CO2 glitches" Read 31107 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder CC129271" [1] "Position 2 Cylinder ND19517" [1] "Position 3 Cylinder CC129281" [1] "Position 4 Cylinder CC161540" [1] "Position 5 Cylinder ND19681" [1] "Position 6 Cylinder CC129307" [1] "Position 7 Cylinder ND19529" [1] "Position 8 Cylinder ND19273" [1] "Position 9 Cylinder CC129295" [1] "Position 10 Cylinder ND20050" [1] "Position 11 Cylinder CC129293" [1] "Position 12 Cylinder ND20887" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: ND19517 ND19681 ND19529 ND19273 ND20050 ND20887 LIST_UNKNOWN: CC129271 CC129281 CC161540 CC129307 CC129295 CC129293 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "**************** missing data at 9226" [1] "Processing jog 43 at position 9283" [1] "Processing jog 44 at position 9508" [1] "Processing jog 45 at position 9733" [1] "Processing jog 46 at position 9958" [1] "Processing jog 47 at position 10183" [1] "Processing jog 48 at position 10408" [1] "Processing jog 49 at position 10633" [1] "Processing jog 50 at position 10858" [1] "Processing jog 51 at position 11083" [1] "Processing jog 52 at position 11308" [1] "Processing jog 53 at position 11533" [1] "Processing jog 54 at position 11758" [1] "Processing jog 55 at position 11983" [1] "Processing jog 56 at position 12208" [1] "Processing jog 57 at position 12433" [1] "Processing jog 58 at position 12658" [1] "Processing jog 59 at position 12883" [1] "Processing jog 60 at position 13108" [1] "Processing jog 61 at position 13333" [1] "Processing jog 62 at position 13558" [1] "Processing jog 63 at position 13783" [1] "Processing jog 64 at position 14008" [1] "Processing jog 65 at position 14233" [1] "Processing jog 66 at position 14458" [1] "Processing jog 67 at position 14683" [1] "Processing jog 68 at position 14908" [1] "Processing jog 69 at position 15133" [1] "Processing jog 70 at position 15358" [1] "Processing jog 71 at position 15583" [1] "Processing jog 72 at position 15808" [1] "Processing jog 73 at position 16033" [1] "Processing jog 74 at position 16258" [1] "Processing jog 75 at position 16483" [1] "Processing jog 76 at position 16708" [1] "Processing jog 77 at position 16933" [1] "Processing jog 78 at position 17158" [1] "Processing jog 79 at position 17383" [1] "Processing jog 80 at position 17608" [1] "Processing jog 81 at position 17833" [1] "Processing jog 82 at position 18058" [1] "Processing jog 83 at position 18283" [1] "Processing jog 84 at position 18508" [1] "Processing jog 85 at position 18733" [1] "Processing jog 86 at position 18958" [1] "Processing jog 87 at position 19183" [1] "Processing jog 88 at position 19408" [1] "Processing jog 89 at position 19633" [1] "Processing jog 90 at position 19858" [1] "Processing jog 91 at position 20083" [1] "Processing jog 92 at position 20308" [1] "Processing jog 93 at position 20533" [1] "Processing jog 94 at position 20758" [1] "Processing jog 95 at position 20983" [1] "Processing jog 96 at position 21208" [1] "Processing jog 97 at position 21433" [1] "Processing jog 98 at position 21658" [1] "Processing jog 99 at position 21883" [1] "Processing jog 100 at position 22108" [1] "Processing jog 101 at position 22333" [1] "Processing jog 102 at position 22558" [1] "Processing jog 103 at position 22783" [1] "Processing jog 104 at position 23008" [1] "Processing jog 105 at position 23233" [1] "Processing jog 106 at position 23458" [1] "Processing jog 107 at position 23683" [1] "Processing jog 108 at position 23908" [1] "Processing jog 109 at position 24133" [1] "Processing jog 110 at position 24358" [1] "Processing jog 111 at position 24583" [1] "Processing jog 112 at position 24808" [1] "Processing jog 113 at position 25033" [1] "Processing jog 114 at position 25258" [1] "Processing jog 115 at position 25483" [1] "Processing jog 116 at position 25708" [1] "Processing jog 117 at position 25933" [1] "Processing jog 118 at position 26158" [1] "Processing jog 119 at position 26383" [1] "Processing jog 120 at position 26608" [1] "Processing jog 121 at position 26833" [1] "Processing jog 122 at position 27058" [1] "Processing jog 123 at position 27283" [1] "Processing jog 124 at position 27508" [1] "Processing jog 125 at position 27733" [1] "Processing jog 126 at position 27958" [1] "Processing jog 127 at position 28183" [1] "Processing jog 128 at position 28408" [1] "Processing jog 129 at position 28633" [1] "Processing jog 130 at position 28858" [1] "Processing jog 131 at position 29083" [1] "Processing jog 132 at position 29308" [1] "Processing jog 133 at position 29533" [1] "Processing jog 134 at position 29758" [1] "Processing jog 135 at position 29983" [1] "Processing jog 136 at position 30208" [1] "Processing jog 137 at position 30433" [1] "Processing jog 138 at position 30658" [1] "Processing jog 139 at position 30883" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 x2 x1 -0.704 -983.730 -3587.049 0.910 387.160 -386.412 0.910 387.265 -386.436 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 77.4832000 2 0.0267003740 [2,] 77.8525627 4 0.0215930960 [3,] 78.0682364 4 0.0230594191 [4,] 78.0839727 1 0.0206251553 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] X 77.4832 2 87.089614 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.706 -984.926 -171.233 0.912 387.158 -384.972 0.912 387.264 [9] -385.062 [1] "plotting CO2 timeseries" [1] "plotting O2 timeseries" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting SP-WT slope correction" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"