Read 65700 records [1] "Analyzing /scr/raf/stephens/CFDAT/090217a.mr" [1] "Reading in data" Read 16425 records [1] "Approximately 73 jogs" [1] "Fixing CO2 glitches" Read 16425 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder OK30057" [1] "Position 2 Cylinder CC129271" [1] "Position 3 Cylinder CC161540" [1] "Position 4 Cylinder OK30070" [1] "Position 5 Cylinder CC129307" [1] "Position 6 Cylinder OK30069" [1] "Position 7 Cylinder OK30055" [1] "Position 8 Cylinder CC129293" [1] "Position 9 Cylinder OK170199" [1] "Position 10 Cylinder OK30053" [1] "Position 11 Cylinder OK30054" [1] "Position 12 Cylinder CC129295" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: CC129271 CC161540 CC129307 CC129293 CC129295 LIST_UNKNOWN: OK30057 OK30070 OK30069 OK30055 OK170199 OK30053 OK30054 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 x2 x1 -0.641 -566.338 -199.131 1.126 494.400 -490.110 1.120 494.199 -490.161 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] x2 48.6413699 4 0.0619901167 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 48.6413699 4 65.0693336 [2,] 48.6518608 6 43.7485405 [3,] 48.7358390 3 10.2724594 [4,] 48.8898659 3 13.0383302 [5,] 48.8951136 4 16.9080294 [6,] 48.9003591 5 18.0353675 [7,] 48.9056046 6 17.8147375 [8,] 48.9108488 7 19.0659999 [9,] 48.9160943 8 19.0086765 [10,] 48.9213397 9 17.9971086 [11,] 48.9265852 10 18.5603432 [12,] 48.9318469 11 18.5570473 [13,] 48.9370912 12 18.0538783 [14,] 48.9422995 12 17.5484682 [15,] 48.9475438 11 19.2423587 [16,] 48.9527881 10 17.7485141 [17,] 48.9580335 9 17.6478022 [18,] 48.9632779 8 16.7570702 [19,] 48.9685234 7 17.6248101 [20,] 48.9738059 6 17.6721114 [21,] 48.9790513 5 16.7406407 [22,] 48.9842956 4 17.2276728 [23,] 48.9895410 3 16.9877529 [24,] 48.9947877 2 17.1591432 [25,] 49.0000331 1 16.6715425 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.639 -566.828 379.075 1.127 494.402 -484.349 1.120 494.201 [9] -484.664 [1] "plotting CO2 timeseries" [1] "plotting O2 timeseries" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting SP-WT slope correction" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"