Read 45042 records [1] "Analyzing /scr/raf/stephens/CFDAT/050512a.mr" [1] "Reading in data" Read 7507 records [1] "Approximately 50 jogs" [1] "Fixing CO2 glitches" Read 7507 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder CC129271" [1] "Position 2 Cylinder FA02340" [1] "Position 3 Cylinder CC129281" [1] "Position 4 Cylinder FA02361" [1] "Position 5 Cylinder FA02374" [1] "Position 6 Cylinder CC129307" [1] "Position 7 Cylinder CC29083" [1] "Position 8 Cylinder JJ21201" [1] "Position 9 Cylinder CC129293" [1] "Position 10 Cylinder JJ8440" [1] "Position 11 Cylinder ND12795" [1] "Position 12 Cylinder JJ8588" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: CC129271 CC129281 CC129307 CC129293 ND12795 LIST_UNKNOWN: FA02340 FA02361 FA02374 CC29083 JJ21201 JJ8440 ND12795 JJ8588 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Skipping final 20 records." [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 151" [1] "Processing jog 3 at position 301" [1] "Processing jog 4 at position 451" [1] "Processing jog 5 at position 601" [1] "Processing jog 6 at position 751" [1] "Processing jog 7 at position 901" [1] "Processing jog 8 at position 1051" [1] "**************** missing data at 1051" [1] "Processing jog 9 at position 1196" [1] "**************** missing data at 1196" [1] "Processing jog 10 at position 1340" [1] "**************** missing data at 1340" [1] "Processing jog 11 at position 1488" [1] "Processing jog 12 at position 1638" [1] "Processing jog 13 at position 1788" [1] "Processing jog 14 at position 1938" [1] "Processing jog 15 at position 2088" [1] "Processing jog 16 at position 2238" [1] "Processing jog 17 at position 2388" [1] "Processing jog 18 at position 2538" [1] "Processing jog 19 at position 2688" [1] "Processing jog 20 at position 2838" [1] "Processing jog 21 at position 2988" [1] "Processing jog 22 at position 3138" [1] "Processing jog 23 at position 3288" [1] "Processing jog 24 at position 3438" [1] "Processing jog 25 at position 3588" [1] "Processing jog 26 at position 3738" [1] "Processing jog 27 at position 3888" [1] "Processing jog 28 at position 4038" [1] "Processing jog 29 at position 4188" [1] "Processing jog 30 at position 4338" [1] "Processing jog 31 at position 4488" [1] "Processing jog 32 at position 4638" [1] "Processing jog 33 at position 4788" [1] "Processing jog 34 at position 4938" [1] "Processing jog 35 at position 5088" [1] "Processing jog 36 at position 5238" [1] "Processing jog 37 at position 5388" [1] "Processing jog 38 at position 5538" [1] "Processing jog 39 at position 5688" [1] "Processing jog 40 at position 5838" [1] "Processing jog 41 at position 5988" [1] "Processing jog 42 at position 6138" [1] "Processing jog 43 at position 6288" [1] "Processing jog 44 at position 6438" [1] "Processing jog 45 at position 6588" [1] "Processing jog 46 at position 6738" [1] "Processing jog 47 at position 6888" [1] "Processing jog 48 at position 7038" [1] "Processing jog 49 at position 7188" [1] "Processing jog 50 at position 7338" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 x2 x1 -0.630 -343.808 1277.159 2.069 363.820 -382.776 2.065 363.919 -382.823 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 132.483637 3 7.13136975 [2,] 132.494197 5 4.22203140 [3,] 132.608988 2 4.04555195 [4,] 132.677651 3 4.64948824 [5,] 132.688214 5 4.01099027 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.630 -343.967 572.030 2.069 363.820 -381.654 2.065 363.919 [9] -381.682 [1] "plotting CO2 timeseries" [1] "plotting O2 timeseries" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 12" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting SP-WT slope correction" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"