Read 67200 records [1] "Analyzing /scr/raf/stephens/CFDAT/041227a.mr" [1] "Reading in data" Read 11200 records [1] "Approximately 112 jogs" [1] "Fixing CO2 glitches" Read 11200 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder CC129271" [1] "Position 2 Cylinder JJ8174" [1] "Position 3 Cylinder CC129281" [1] "Position 4 Cylinder JJ13623" [1] "Position 5 Cylinder FA02360" [1] "Position 6 Cylinder CC129307" [1] "Position 7 Cylinder JJ13615" [1] "Position 8 Cylinder JJ16901" [1] "Position 9 Cylinder CC129293" [1] "Position 10 Cylinder JJ8550" [1] "Position 11 Cylinder ND12795" [1] "Position 12 Cylinder JJ8588" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: CC129271 CC129281 CC129307 CC129293 ND12795 LIST_UNKNOWN: JJ8174 JJ13623 FA02360 JJ13615 JJ16901 JJ8550 ND12795 JJ8588 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 101" [1] "Processing jog 3 at position 201" [1] "Processing jog 4 at position 301" [1] "Processing jog 5 at position 401" [1] "Processing jog 6 at position 501" [1] "Processing jog 7 at position 601" [1] "Processing jog 8 at position 701" [1] "Processing jog 9 at position 801" [1] "Processing jog 10 at position 901" [1] "Processing jog 11 at position 1001" [1] "Processing jog 12 at position 1101" [1] "Processing jog 13 at position 1201" [1] "Processing jog 14 at position 1301" [1] "Processing jog 15 at position 1401" [1] "Processing jog 16 at position 1501" [1] "Processing jog 17 at position 1601" [1] "Processing jog 18 at position 1701" [1] "Processing jog 19 at position 1801" [1] "Processing jog 20 at position 1901" [1] "Processing jog 21 at position 2001" [1] "Processing jog 22 at position 2101" [1] "Processing jog 23 at position 2201" [1] "Processing jog 24 at position 2301" [1] "Processing jog 25 at position 2401" [1] "Processing jog 26 at position 2501" [1] "Processing jog 27 at position 2601" [1] "Processing jog 28 at position 2701" [1] "Processing jog 29 at position 2801" [1] "Processing jog 30 at position 2901" [1] "Processing jog 31 at position 3001" [1] "Processing jog 32 at position 3101" [1] "Processing jog 33 at position 3201" [1] "Processing jog 34 at position 3301" [1] "Processing jog 35 at position 3401" [1] "Processing jog 36 at position 3501" [1] "Processing jog 37 at position 3601" [1] "Processing jog 38 at position 3701" [1] "Processing jog 39 at position 3801" [1] "Processing jog 40 at position 3901" [1] "Processing jog 41 at position 4001" [1] "Processing jog 42 at position 4101" [1] "Processing jog 43 at position 4201" [1] "Processing jog 44 at position 4301" [1] "Processing jog 45 at position 4401" [1] "Processing jog 46 at position 4501" [1] "Processing jog 47 at position 4601" [1] "Processing jog 48 at position 4701" [1] "Processing jog 49 at position 4801" [1] "Processing jog 50 at position 4901" [1] "Processing jog 51 at position 5001" [1] "Processing jog 52 at position 5101" [1] "Processing jog 53 at position 5201" [1] "Processing jog 54 at position 5301" [1] "Processing jog 55 at position 5401" [1] "Processing jog 56 at position 5501" [1] "Processing jog 57 at position 5601" [1] "Processing jog 58 at position 5701" [1] "Processing jog 59 at position 5801" [1] "Processing jog 60 at position 5901" [1] "Processing jog 61 at position 6001" [1] "Processing jog 62 at position 6101" [1] "Processing jog 63 at position 6201" [1] "Processing jog 64 at position 6301" [1] "Processing jog 65 at position 6401" [1] "Processing jog 66 at position 6501" [1] "Processing jog 67 at position 6601" [1] "Processing jog 68 at position 6701" [1] "Processing jog 69 at position 6801" [1] "Processing jog 70 at position 6901" [1] "Processing jog 71 at position 7001" [1] "Processing jog 72 at position 7101" [1] "Processing jog 73 at position 7201" [1] "Processing jog 74 at position 7301" [1] "Processing jog 75 at position 7401" [1] "Processing jog 76 at position 7501" [1] "Processing jog 77 at position 7601" [1] "Processing jog 78 at position 7701" [1] "Processing jog 79 at position 7801" [1] "Processing jog 80 at position 7901" [1] "Processing jog 81 at position 8001" [1] "Processing jog 82 at position 8101" [1] "Processing jog 83 at position 8201" [1] "Processing jog 84 at position 8301" [1] "Processing jog 85 at position 8401" [1] "Processing jog 86 at position 8501" [1] "Processing jog 87 at position 8601" [1] "Processing jog 88 at position 8701" [1] "Processing jog 89 at position 8801" [1] "Processing jog 90 at position 8901" [1] "Processing jog 91 at position 9001" [1] "Processing jog 92 at position 9101" [1] "Processing jog 93 at position 9201" [1] "Processing jog 94 at position 9301" [1] "Processing jog 95 at position 9401" [1] "Processing jog 96 at position 9501" [1] "Processing jog 97 at position 9601" [1] "Processing jog 98 at position 9701" [1] "Processing jog 99 at position 9801" [1] "Processing jog 100 at position 9901" [1] "Processing jog 101 at position 10001" [1] "Processing jog 102 at position 10101" [1] "Processing jog 103 at position 10201" [1] "Processing jog 104 at position 10301" [1] "Processing jog 105 at position 10401" [1] "Processing jog 106 at position 10501" [1] "Processing jog 107 at position 10601" [1] "Processing jog 108 at position 10701" [1] "Processing jog 109 at position 10801" [1] "Processing jog 110 at position 10901" [1] "Processing jog 111 at position 11001" [1] "Processing jog 112 at position 11101" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 x2 x1 0.822 -542.830 1246.387 -2.210 383.686 -405.453 -2.209 383.762 -405.500 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 362.614934 12 70.07143044 [2,] 362.653281 11 8.40505604 [3,] 362.670711 4 8.42365851 [4,] 362.674197 5 9.14039015 [5,] 362.681169 7 8.02684809 [6,] 362.684655 8 8.48031141 [7,] 362.695114 11 8.20971777 [8,] 362.709058 3 8.04763027 [9,] 362.719523 6 9.60657388 [10,] 362.723009 7 9.09480030 [11,] 362.729981 9 8.16533327 [12,] 362.935383 12 8.78555644 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] 0.820 -544.916 569.246 -2.210 383.683 -402.911 -2.208 383.759 [9] -402.978 [1] "plotting CO2 timeseries" [1] "plotting O2 timeseries" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 11" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting SP-WT slope correction" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"