Read 33402 records
[1] "Analyzing  /scr/raf/stephens/CFDAT/041222a.mr"
[1] "Reading in data"
Read 5567 records
[1] "Approximately  56  jogs"
[1] "Fixing CO2 glitches"
Read 5567 records
[1] "Finding cylinder IDs"
[1] "Position  1    Cylinder  CC129271"
[1] "Position  2    Cylinder  JJ8174"
[1] "Position  3    Cylinder  CC129281"
[1] "Position  4    Cylinder  JJ13623"
[1] "Position  5    Cylinder  FA02360"
[1] "Position  6    Cylinder  CC129307"
[1] "Position  7    Cylinder  JJ13615"
[1] "Position  8    Cylinder  JJ16901"
[1] "Position  9    Cylinder  CC129293"
[1] "Position  10    Cylinder  JJ8550"
[1] "Position  11    Cylinder  ND12795"
[1] "Position  12    Cylinder  JJ8588"
[1] "Position  13    Cylinder  NA"
Read 13 records
LIST_KNOWN: CC129271 CC129281 CC129307 CC129293 ND12795 
LIST_UNKNOWN: JJ8174 JJ13623 FA02360 JJ13615 JJ16901 JJ8550 ND12795 JJ8588 
Read 171 records
Read 54 records
Read 536 records
Read 2 items
[1] "Skipping final  67  records."
[1] "Processing jog 1 at position 1"
[1] "Processing jog 2 at position 101"
[1] "Processing jog 3 at position 201"
[1] "Processing jog 4 at position 301"
[1] "Processing jog 5 at position 401"
[1] "Processing jog 6 at position 501"
[1] "Processing jog 7 at position 601"
[1] "Processing jog 8 at position 701"
[1] "Processing jog 9 at position 801"
[1] "Processing jog 10 at position 901"
[1] "Processing jog 11 at position 1001"
[1] "Processing jog 12 at position 1101"
[1] "Processing jog 13 at position 1201"
[1] "Processing jog 14 at position 1301"
[1] "Processing jog 15 at position 1401"
[1] "Processing jog 16 at position 1501"
[1] "Processing jog 17 at position 1601"
[1] "Processing jog 18 at position 1701"
[1] "Processing jog 19 at position 1801"
[1] "Processing jog 20 at position 1901"
[1] "Processing jog 21 at position 2001"
[1] "Processing jog 22 at position 2101"
[1] "Processing jog 23 at position 2201"
[1] "Processing jog 24 at position 2301"
[1] "Processing jog 25 at position 2401"
[1] "Processing jog 26 at position 2501"
[1] "Processing jog 27 at position 2601"
[1] "Processing jog 28 at position 2701"
[1] "Processing jog 29 at position 2801"
[1] "Processing jog 30 at position 2901"
[1] "Processing jog 31 at position 3001"
[1] "Processing jog 32 at position 3101"
[1] "Processing jog 33 at position 3201"
[1] "Processing jog 34 at position 3301"
[1] "Processing jog 35 at position 3401"
[1] "Processing jog 36 at position 3501"
[1] "Processing jog 37 at position 3601"
[1] "Processing jog 38 at position 3701"
[1] "Processing jog 39 at position 3801"
[1] "Processing jog 40 at position 3901"
[1] "Processing jog 41 at position 4001"
[1] "Processing jog 42 at position 4101"
[1] "Processing jog 43 at position 4201"
[1] "Processing jog 44 at position 4301"
[1] "Processing jog 45 at position 4401"
[1] "Processing jog 46 at position 4501"
[1] "Processing jog 47 at position 4601"
[1] "Processing jog 48 at position 4701"
[1] "Processing jog 49 at position 4801"
[1] "Processing jog 50 at position 4901"
[1] "Processing jog 51 at position 5001"
[1] "Processing jog 52 at position 5101"
[1] "Processing jog 53 at position 5201"
[1] "Processing jog 54 at position 5301"
[1] "Processing jog 55 at position 5401"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)"
                                 x2       x1                x2       x1 
   6.041    0.000    0.000    2.299  375.499 -389.421    2.297  375.580 
         
-389.468 
[1] "Screened jogs for high CO2 standard deviation:"
           [,1] [,2]         [,3]
[1,] 357.531528   12 0.0312494216
[2,] 357.548959    5 0.0338179401
[3,] 357.562903    9 0.0315462444
[4,] 357.604741    9 0.0306199086
[5,] 357.643362    8 0.0321461641
[1] "calculating fits"
[1] "plotting CO2 cal parameters"
[1] "calculating final numbers"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)"
[1]    6.041    0.000   42.851    2.298  375.495 -388.525    2.295  375.576
[9] -388.581
[1] "plotting CO2 timeseries"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12"
[1] "plotting unknown co2"
[1] "plotting known co2"
[1] "plotting all variables"
[1] "plotting standard deviations"
[1] "plotting slopes"
[1] "plotting CO2 fits"
[1] "calculating switching times"
[1] "plotting co2 switching times"
[1] "plotting co2 rollover"
[1] "plotting co2 results"
[1] "plotting average residuals"
[1] "making html"
[1] "making index html"