Read 63624 records [1] "Analyzing /scr/raf/stephens/CFDAT/041221b.mr" [1] "Reading in data" Read 10604 records [1] "Approximately 106 jogs" [1] "Fixing CO2 glitches" Read 10604 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder CC129271" [1] "Position 2 Cylinder JJ8174" [1] "Position 3 Cylinder CC129281" [1] "Position 4 Cylinder JJ13623" [1] "Position 5 Cylinder FA02360" [1] "Position 6 Cylinder CC129307" [1] "Position 7 Cylinder JJ13615" [1] "Position 8 Cylinder JJ16901" [1] "Position 9 Cylinder CC129293" [1] "Position 10 Cylinder JJ8550" [1] "Position 11 Cylinder ND12795" [1] "Position 12 Cylinder JJ8588" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: CC129271 CC129281 CC129307 CC129293 ND12795 LIST_UNKNOWN: JJ8174 JJ13623 FA02360 JJ13615 JJ16901 JJ8550 ND12795 JJ8588 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Skipping final 4 records." [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 101" [1] "Processing jog 3 at position 201" [1] "Processing jog 4 at position 301" [1] "Processing jog 5 at position 401" [1] "Processing jog 6 at position 501" [1] "Processing jog 7 at position 601" [1] "Processing jog 8 at position 701" [1] "Processing jog 9 at position 801" [1] "Processing jog 10 at position 901" [1] "Processing jog 11 at position 1001" [1] "Processing jog 12 at position 1101" [1] "Processing jog 13 at position 1201" [1] "Processing jog 14 at position 1301" [1] "Processing jog 15 at position 1401" [1] "Processing jog 16 at position 1501" [1] "Processing jog 17 at position 1601" [1] "Processing jog 18 at position 1701" [1] "Processing jog 19 at position 1801" [1] "Processing jog 20 at position 1901" [1] "Processing jog 21 at position 2001" [1] "Processing jog 22 at position 2101" [1] "Processing jog 23 at position 2201" [1] "Processing jog 24 at position 2301" [1] "Processing jog 25 at position 2401" [1] "Processing jog 26 at position 2501" [1] "Processing jog 27 at position 2601" [1] "Processing jog 28 at position 2701" [1] "Processing jog 29 at position 2801" [1] "Processing jog 30 at position 2901" [1] "Processing jog 31 at position 3001" [1] "Processing jog 32 at position 3101" [1] "Processing jog 33 at position 3201" [1] "Processing jog 34 at position 3301" [1] "Processing jog 35 at position 3401" [1] "Processing jog 36 at position 3501" [1] "Processing jog 37 at position 3601" [1] "Processing jog 38 at position 3701" [1] "Processing jog 39 at position 3801" [1] "Processing jog 40 at position 3901" [1] "Processing jog 41 at position 4001" [1] "Processing jog 42 at position 4101" [1] "Processing jog 43 at position 4201" [1] "Processing jog 44 at position 4301" [1] "Processing jog 45 at position 4401" [1] "Processing jog 46 at position 4501" [1] "Processing jog 47 at position 4601" [1] "Processing jog 48 at position 4701" [1] "Processing jog 49 at position 4801" [1] "Processing jog 50 at position 4901" [1] "Processing jog 51 at position 5001" [1] "Processing jog 52 at position 5101" [1] "Processing jog 53 at position 5201" [1] "Processing jog 54 at position 5301" [1] "Processing jog 55 at position 5401" [1] "Processing jog 56 at position 5501" [1] "Processing jog 57 at position 5601" [1] "Processing jog 58 at position 5701" [1] "Processing jog 59 at position 5801" [1] "Processing jog 60 at position 5901" [1] "Processing jog 61 at position 6001" [1] "Processing jog 62 at position 6101" [1] "Processing jog 63 at position 6201" [1] "Processing jog 64 at position 6301" [1] "Processing jog 65 at position 6401" [1] "Processing jog 66 at position 6501" [1] "Processing jog 67 at position 6601" [1] "Processing jog 68 at position 6701" [1] "Processing jog 69 at position 6801" [1] "Processing jog 70 at position 6901" [1] "Processing jog 71 at position 7001" [1] "Processing jog 72 at position 7101" [1] "Processing jog 73 at position 7201" [1] "Processing jog 74 at position 7301" [1] "Processing jog 75 at position 7401" [1] "Processing jog 76 at position 7501" [1] "Processing jog 77 at position 7601" [1] "Processing jog 78 at position 7701" [1] "Processing jog 79 at position 7801" [1] "Processing jog 80 at position 7901" [1] "Processing jog 81 at position 8001" [1] "Processing jog 82 at position 8101" [1] "Processing jog 83 at position 8201" [1] "Processing jog 84 at position 8301" [1] "Processing jog 85 at position 8401" [1] "Processing jog 86 at position 8501" [1] "Processing jog 87 at position 8601" [1] "Processing jog 88 at position 8701" [1] "Processing jog 89 at position 8801" [1] "Processing jog 90 at position 8901" [1] "Processing jog 91 at position 9001" [1] "Processing jog 92 at position 9101" [1] "Processing jog 93 at position 9201" [1] "Processing jog 94 at position 9301" [1] "Processing jog 95 at position 9401" [1] "Processing jog 96 at position 9501" [1] "Processing jog 97 at position 9601" [1] "Processing jog 98 at position 9701" [1] "Processing jog 99 at position 9801" [1] "Processing jog 100 at position 9901" [1] "Processing jog 101 at position 10001" [1] "Processing jog 102 at position 10101" [1] "Processing jog 103 at position 10201" [1] "Processing jog 104 at position 10301" [1] "Processing jog 105 at position 10401" [1] "Processing jog 106 at position 10501" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 x2 x1 -0.769 -399.537 687.130 2.289 375.477 -389.370 2.287 375.559 -389.417 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 356.011573 5 0.0356096714 [2,] 356.025517 9 0.0251892870 [3,] 356.029003 10 0.0207188564 [4,] 356.060378 7 0.0232176137 [5,] 356.063864 8 0.0221993707 [6,] 356.077808 12 0.0214665778 [7,] 356.109183 9 0.0237482681 [8,] 356.147530 8 0.0268679751 [9,] 356.151016 9 0.0208009064 [10,] 356.189363 8 0.0224735312 [11,] 356.224228 6 0.0290284914 [12,] 356.231200 8 0.0251783337 [13,] 356.234686 9 0.0259264478 [14,] 356.252121 2 0.0271719468 [15,] 356.262579 5 0.0257738533 [16,] 356.269551 7 0.0270000908 [17,] 356.273037 8 0.0212317445 [18,] 356.304412 5 0.0351726116 [19,] 356.311384 7 0.0224980663 [20,] 356.314870 8 0.0331613104 [21,] 356.318356 9 0.0209347458 [22,] 356.321843 10 0.0262276592 [23,] 356.335787 2 0.0275269727 [24,] 356.353217 7 0.0204559055 [25,] 356.367162 11 0.0278001901 [26,] 356.370648 12 0.0280100021 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 356.011573 5 4.92927117 [2,] 356.015059 6 4.01233341 [3,] 356.018545 7 4.14984862 [4,] 356.032489 11 4.42599653 [5,] 356.049920 4 5.16861240 [6,] 356.074322 11 4.86181799 [7,] 356.091752 4 5.28778040 [8,] 356.102211 7 4.79668223 [9,] 356.112669 10 4.21674383 [10,] 356.123127 1 5.31448130 [11,] 356.137071 5 4.63740341 [12,] 356.147530 8 4.74277340 [13,] 356.151016 9 4.35649017 [14,] 356.154502 10 5.21142948 [15,] 356.157988 11 5.22259031 [16,] 356.164960 1 4.12746625 [17,] 356.171932 3 5.17519986 [18,] 356.192849 9 5.73983301 [19,] 356.196335 10 4.22057597 [20,] 356.199821 11 5.19148388 [21,] 356.220742 5 4.46027743 [22,] 356.224228 6 4.16928669 [23,] 356.245149 12 4.84341575 [24,] 356.248635 1 4.40828252 [25,] 356.252121 2 5.39607141 [26,] 356.255607 3 4.03955675 [27,] 356.259093 4 5.13174671 [28,] 356.266065 6 6.29751520 [29,] 356.276524 9 4.57160156 [30,] 356.283496 11 5.52405392 [31,] 356.286982 12 5.15315339 [32,] 356.293954 2 4.96582540 [33,] 356.297440 3 4.09372516 [34,] 356.304412 5 5.07093513 [35,] 356.307898 6 6.19997465 [36,] 356.311384 7 5.10868898 [37,] 356.314870 8 5.51758288 [38,] 356.318356 9 4.04155116 [39,] 356.321843 10 6.28686156 [40,] 356.325329 11 6.59159976 [41,] 356.328815 12 6.91757636 [42,] 356.332301 1 6.65577254 [43,] 356.335787 2 5.14926693 [44,] 356.339273 3 7.51299182 [45,] 356.342759 4 5.22939726 [46,] 356.346245 5 4.03550200 [47,] 356.349731 6 4.07064896 [48,] 356.353217 7 5.03076889 [49,] 356.363676 10 4.70074329 [50,] 356.367162 11 4.69598892 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.768 -399.310 473.968 2.290 375.474 -388.489 2.287 375.556 [9] -388.545 [1] "plotting CO2 timeseries" [1] "plotting O2 timeseries" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 12" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting SP-WT slope correction" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"