Read 33486 records [1] "Analyzing /scr/raf/stephens/CFDAT/041216a.mr" [1] "Reading in data" Read 5581 records [1] "Approximately 56 jogs" [1] "Fixing CO2 glitches" Read 5581 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder CC129271" [1] "Position 2 Cylinder JJ8174" [1] "Position 3 Cylinder CC129281" [1] "Position 4 Cylinder JJ13623" [1] "Position 5 Cylinder FA02360" [1] "Position 6 Cylinder CC129307" [1] "Position 7 Cylinder JJ13615" [1] "Position 8 Cylinder JJ16901" [1] "Position 9 Cylinder CC129293" [1] "Position 10 Cylinder JJ8550" [1] "Position 11 Cylinder ND12795" [1] "Position 12 Cylinder JJ8588" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: CC129271 CC129281 CC129307 CC129293 ND12795 LIST_UNKNOWN: JJ8174 JJ13623 FA02360 JJ13615 JJ16901 JJ8550 ND12795 JJ8588 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Skipping initial 68 records." [1] "Skipping final 13 records." [1] "Processing jog 1 at position 69" [1] "Processing jog 2 at position 169" [1] "Processing jog 3 at position 269" [1] "Processing jog 4 at position 369" [1] "Processing jog 5 at position 469" [1] "Processing jog 6 at position 569" [1] "Processing jog 7 at position 669" [1] "Processing jog 8 at position 769" [1] "Processing jog 9 at position 869" [1] "Processing jog 10 at position 969" [1] "Processing jog 11 at position 1069" [1] "Processing jog 12 at position 1169" [1] "Processing jog 13 at position 1269" [1] "Processing jog 14 at position 1369" [1] "Processing jog 15 at position 1469" [1] "Processing jog 16 at position 1569" [1] "Processing jog 17 at position 1669" [1] "Processing jog 18 at position 1769" [1] "Processing jog 19 at position 1869" [1] "Processing jog 20 at position 1969" [1] "Processing jog 21 at position 2069" [1] "Processing jog 22 at position 2169" [1] "Processing jog 23 at position 2269" [1] "Processing jog 24 at position 2369" [1] "Processing jog 25 at position 2469" [1] "Processing jog 26 at position 2569" [1] "Processing jog 27 at position 2669" [1] "Processing jog 28 at position 2769" [1] "Processing jog 29 at position 2869" [1] "Processing jog 30 at position 2969" [1] "Processing jog 31 at position 3069" [1] "Processing jog 32 at position 3169" [1] "Processing jog 33 at position 3269" [1] "Processing jog 34 at position 3369" [1] "Processing jog 35 at position 3469" [1] "Processing jog 36 at position 3569" [1] "Processing jog 37 at position 3669" [1] "Processing jog 38 at position 3769" [1] "Processing jog 39 at position 3869" [1] "Processing jog 40 at position 3969" [1] "Processing jog 41 at position 4069" [1] "Processing jog 42 at position 4169" [1] "Processing jog 43 at position 4269" [1] "Processing jog 44 at position 4369" [1] "Processing jog 45 at position 4469" [1] "Processing jog 46 at position 4569" [1] "Processing jog 47 at position 4669" [1] "Processing jog 48 at position 4769" [1] "Processing jog 49 at position 4869" [1] "Processing jog 50 at position 4969" [1] "Processing jog 51 at position 5069" [1] "Processing jog 52 at position 5169" [1] "Processing jog 53 at position 5269" [1] "Processing jog 54 at position 5369" [1] "Processing jog 55 at position 5469" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 x2 x1 -0.765 -395.639 719.112 2.245 375.549 -389.206 2.243 375.631 -389.253 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 351.550157 8 0.0226563395 [2,] 351.595477 9 0.0319961584 [3,] 351.633824 8 0.0200205125 [4,] 351.637310 9 0.0251056848 [5,] 351.714006 7 0.0234444677 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 351.532486 3 4.32090859 [2,] 351.546671 7 5.39170332 [3,] 351.550157 8 4.15889560 [4,] 351.557129 10 6.75711672 [5,] 351.560615 11 6.01441631 [6,] 351.564101 12 5.08346676 [7,] 351.571074 2 4.26479092 [8,] 351.574560 3 4.90646279 [9,] 351.581532 5 5.14954268 [10,] 351.595477 9 5.04862088 [11,] 351.598963 10 4.34802320 [12,] 351.609421 1 5.23887572 [13,] 351.619880 4 4.37292077 [14,] 351.626852 6 4.48456379 [15,] 351.630338 7 5.58509548 [16,] 351.633824 8 4.87973237 [17,] 351.637310 9 5.54642843 [18,] 351.654741 2 5.01195391 [19,] 351.661714 4 4.61938810 [20,] 351.682631 10 4.35190611 [21,] 351.689603 12 4.24746862 [22,] 351.700061 3 4.68405331 [23,] 351.710520 6 4.05509313 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.766 -394.129 478.080 2.245 375.550 -388.320 2.243 375.631 [9] -388.376 [1] "plotting CO2 timeseries" [1] "plotting O2 timeseries" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 12" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting SP-WT slope correction" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"