Read 39600 records
[1] "Analyzing  /scr/raf/stephens/CFDAT/040708e.mr"
[1] "Reading in data"
Read 3960 records
[1] "Approximately  66  jogs"
[1] "Fixing CO2 glitches"
Read 3960 records
[1] "Finding cylinder IDs"
[1] "Position  1    Cylinder  ND12795"
[1] "Position  2    Cylinder  JJ8588"
[1] "Position  3    Cylinder  CC129271"
[1] "Position  4    Cylinder  FA02361"
[1] "Position  5    Cylinder  FA02340"
[1] "Position  6    Cylinder  CC129281"
[1] "Position  7    Cylinder  JJ19017"
[1] "Position  8    Cylinder  JJ8550"
[1] "Position  9    Cylinder  CC129307"
[1] "Position  10    Cylinder  FA02374"
[1] "Position  11    Cylinder  CC129293"
[1] "Position  12    Cylinder  JJ8440"
[1] "Position  13    Cylinder  NA"
Read 13 records
LIST_KNOWN: ND12795 CC129271 CC129281 CC129307 CC129293 
LIST_UNKNOWN: ND12795 JJ8588 FA02361 FA02340 JJ19017 JJ8550 FA02374 JJ8440 
Read 171 records
Read 54 records
Read 536 records
Read 2 items
[1] "Processing jog 1 at position 1"
[1] "Processing jog 2 at position 61"
[1] "Processing jog 3 at position 121"
[1] "Processing jog 4 at position 181"
[1] "Processing jog 5 at position 241"
[1] "Processing jog 6 at position 301"
[1] "Processing jog 7 at position 361"
[1] "Processing jog 8 at position 421"
[1] "Processing jog 9 at position 481"
[1] "Processing jog 10 at position 541"
[1] "Processing jog 11 at position 601"
[1] "Processing jog 12 at position 661"
[1] "Processing jog 13 at position 721"
[1] "Processing jog 14 at position 781"
[1] "Processing jog 15 at position 841"
[1] "Processing jog 16 at position 901"
[1] "Processing jog 17 at position 961"
[1] "Processing jog 18 at position 1021"
[1] "Processing jog 19 at position 1081"
[1] "Processing jog 20 at position 1141"
[1] "Processing jog 21 at position 1201"
[1] "Processing jog 22 at position 1261"
[1] "Processing jog 23 at position 1321"
[1] "Processing jog 24 at position 1381"
[1] "Processing jog 25 at position 1441"
[1] "Processing jog 26 at position 1501"
[1] "Processing jog 27 at position 1561"
[1] "Processing jog 28 at position 1621"
[1] "Processing jog 29 at position 1681"
[1] "Processing jog 30 at position 1741"
[1] "Processing jog 31 at position 1801"
[1] "Processing jog 32 at position 1861"
[1] "Processing jog 33 at position 1921"
[1] "Processing jog 34 at position 1981"
[1] "Processing jog 35 at position 2041"
[1] "Processing jog 36 at position 2101"
[1] "Processing jog 37 at position 2161"
[1] "Processing jog 38 at position 2221"
[1] "Processing jog 39 at position 2281"
[1] "Processing jog 40 at position 2341"
[1] "Processing jog 41 at position 2401"
[1] "Processing jog 42 at position 2461"
[1] "Processing jog 43 at position 2521"
[1] "Processing jog 44 at position 2581"
[1] "Processing jog 45 at position 2641"
[1] "Processing jog 46 at position 2701"
[1] "Processing jog 47 at position 2761"
[1] "Processing jog 48 at position 2821"
[1] "Processing jog 49 at position 2881"
[1] "Processing jog 50 at position 2941"
[1] "Processing jog 51 at position 3001"
[1] "Processing jog 52 at position 3061"
[1] "Processing jog 53 at position 3121"
[1] "Processing jog 54 at position 3181"
[1] "Processing jog 55 at position 3241"
[1] "Processing jog 56 at position 3301"
[1] "Processing jog 57 at position 3361"
[1] "Processing jog 58 at position 3421"
[1] "Processing jog 59 at position 3481"
[1] "Processing jog 60 at position 3541"
[1] "Processing jog 61 at position 3601"
[1] "Processing jog 62 at position 3661"
[1] "Processing jog 63 at position 3721"
[1] "Processing jog 64 at position 3781"
[1] "Processing jog 65 at position 3841"
[1] "Processing jog 66 at position 3901"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)"
                                 x2       x1                x2       x1 
   6.041    0.000    0.000    2.334  376.441 -389.950    2.331  376.521 
         
-389.997 
[1] "Screened jogs for high CO2 standard deviation:"
           [,1] [,2]         [,3]
[1,] 190.424882   12 0.0208354871
[2,] 190.537967    2 0.0204033263
[1] "calculating fits"
[1] "plotting CO2 cal parameters"
[1] "calculating final numbers"
[1] "O2SCL  O2ZERO  O2OFF  CO2SCL_SIO  CO2ZERO_SIO  CO2OFF_SIO  CO2SCL_GMD  CO2ZERO_GMD  CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)"
[1]    6.041    0.000   -5.041    2.333  376.436 -389.120    2.331  376.516
[9] -389.178
[1] "plotting CO2 timeseries"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12"
[1] "plotting unknown co2"
[1] "plotting known co2"
[1] "plotting all variables"
[1] "plotting standard deviations"
[1] "plotting slopes"
[1] "plotting CO2 fits"
[1] "calculating switching times"
[1] "plotting co2 switching times"
[1] "plotting co2 rollover"
[1] "plotting co2 results"
[1] "plotting average residuals"
[1] "making html"
[1] "making index html"