Read 57000 records [1] "Analyzing /scr/raf/stephens/CFDAT/040706e.mr" [1] "Reading in data" Read 5700 records [1] "Approximately 95 jogs" [1] "Fixing CO2 glitches" Read 5700 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder ND12795" [1] "Position 2 Cylinder JJ16901" [1] "Position 3 Cylinder CC129271" [1] "Position 4 Cylinder JJ1378" [1] "Position 5 Cylinder JJ1348" [1] "Position 6 Cylinder CC129281" [1] "Position 7 Cylinder JJ13623" [1] "Position 8 Cylinder JJ1390" [1] "Position 9 Cylinder CC129307" [1] "Position 10 Cylinder JJ8174" [1] "Position 11 Cylinder CC129293" [1] "Position 12 Cylinder JJ21201" [1] "Position 13 Cylinder NA" Read 13 records LIST_KNOWN: ND12795 CC129271 CC129281 CC129307 CC129293 LIST_UNKNOWN: ND12795 JJ16901 JJ1378 JJ1348 JJ13623 JJ1390 JJ8174 JJ21201 Read 171 records Read 54 records Read 536 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 61" [1] "Processing jog 3 at position 121" [1] "Processing jog 4 at position 181" [1] "Processing jog 5 at position 241" [1] "Processing jog 6 at position 301" [1] "Processing jog 7 at position 361" [1] "Processing jog 8 at position 421" [1] "Processing jog 9 at position 481" [1] "Processing jog 10 at position 541" [1] "Processing jog 11 at position 601" [1] "Processing jog 12 at position 661" [1] "Processing jog 13 at position 721" [1] "Processing jog 14 at position 781" [1] "Processing jog 15 at position 841" [1] "Processing jog 16 at position 901" [1] "Processing jog 17 at position 961" [1] "Processing jog 18 at position 1021" [1] "Processing jog 19 at position 1081" [1] "Processing jog 20 at position 1141" [1] "Processing jog 21 at position 1201" [1] "Processing jog 22 at position 1261" [1] "Processing jog 23 at position 1321" [1] "Processing jog 24 at position 1381" [1] "Processing jog 25 at position 1441" [1] "Processing jog 26 at position 1501" [1] "Processing jog 27 at position 1561" [1] "Processing jog 28 at position 1621" [1] "Processing jog 29 at position 1681" [1] "Processing jog 30 at position 1741" [1] "Processing jog 31 at position 1801" [1] "Processing jog 32 at position 1861" [1] "Processing jog 33 at position 1921" [1] "Processing jog 34 at position 1981" [1] "Processing jog 35 at position 2041" [1] "Processing jog 36 at position 2101" [1] "Processing jog 37 at position 2161" [1] "Processing jog 38 at position 2221" [1] "Processing jog 39 at position 2281" [1] "Processing jog 40 at position 2341" [1] "Processing jog 41 at position 2401" [1] "Processing jog 42 at position 2461" [1] "Processing jog 43 at position 2521" [1] "Processing jog 44 at position 2581" [1] "Processing jog 45 at position 2641" [1] "Processing jog 46 at position 2701" [1] "Processing jog 47 at position 2761" [1] "Processing jog 48 at position 2821" [1] "Processing jog 49 at position 2881" [1] "Processing jog 50 at position 2941" [1] "Processing jog 51 at position 3001" [1] "Processing jog 52 at position 3061" [1] "Processing jog 53 at position 3121" [1] "Processing jog 54 at position 3181" [1] "Processing jog 55 at position 3241" [1] "Processing jog 56 at position 3301" [1] "Processing jog 57 at position 3361" [1] "Processing jog 58 at position 3421" [1] "Processing jog 59 at position 3481" [1] "Processing jog 60 at position 3541" [1] "Processing jog 61 at position 3601" [1] "Processing jog 62 at position 3661" [1] "Processing jog 63 at position 3721" [1] "Processing jog 64 at position 3781" [1] "Processing jog 65 at position 3841" [1] "Processing jog 66 at position 3901" [1] "Processing jog 67 at position 3961" [1] "Processing jog 68 at position 4021" [1] "Processing jog 69 at position 4081" [1] "Processing jog 70 at position 4141" [1] "Processing jog 71 at position 4201" [1] "Processing jog 72 at position 4261" [1] "Processing jog 73 at position 4321" [1] "Processing jog 74 at position 4381" [1] "Processing jog 75 at position 4441" [1] "Processing jog 76 at position 4501" [1] "Processing jog 77 at position 4561" [1] "Processing jog 78 at position 4621" [1] "Processing jog 79 at position 4681" [1] "Processing jog 80 at position 4741" [1] "Processing jog 81 at position 4801" [1] "Processing jog 82 at position 4861" [1] "Processing jog 83 at position 4921" [1] "Processing jog 84 at position 4981" [1] "Processing jog 85 at position 5041" [1] "Processing jog 86 at position 5101" [1] "Processing jog 87 at position 5161" [1] "Processing jog 88 at position 5221" [1] "Processing jog 89 at position 5281" [1] "Processing jog 90 at position 5341" [1] "Processing jog 91 at position 5401" [1] "Processing jog 92 at position 5461" [1] "Processing jog 93 at position 5521" [1] "Processing jog 94 at position 5581" [1] "Processing jog 95 at position 5641" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (1ST ESTIMATE FROM MEAN FIT)" x2 x1 x2 x1 6.041 0.000 0.000 2.350 376.475 -390.028 2.347 376.555 -390.075 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 188.709113 1 0.0284966174 [2,] 188.963264 10 0.0214052163 [3,] 189.021172 11 0.0214052163 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "calculating final numbers" [1] "O2SCL O2ZERO O2OFF CO2SCL_SIO CO2ZERO_SIO CO2OFF_SIO CO2SCL_GMD CO2ZERO_GMD CO2OFF_GMD (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] 6.041 0.000 -5.028 2.349 376.459 -389.188 2.347 376.539 [9] -389.246 [1] "plotting CO2 timeseries" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 2" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 4" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 6" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 8" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 10" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 11" [1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 12" [1] "plotting unknown co2" [1] "plotting known co2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting co2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"