[1] "2025-05-13 17:08:01 MDT" options [1,] "file" "180506a" [2,] "flight" "RF06" [3,] "project" "ATOM4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "7" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "180506a" [1] "Reading in flight and plotting intervals" Read 24 records [1] "Reading in /scr/raf/stephens/AO2DAT/180506a.mr" Read 18308 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.36 seconds" [1] "New JOGEST = 2.36 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/180506a.hr" Read 73233 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 05:08:02 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 400.74 O2 = -586.2" [1] "position 2 cylinder OK30768 description: LS CO2 = 423.76 O2 = -829" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -581.5" [1] "position 4 cylinder OK30770 description: WT CO2 = 409.56 O2 = -861.4" [1] "position 5 cylinder OK30769 description: LP CO2 = 408.97 O2 = -883" [1] 400.7440 423.7593 393.4095 409.5612 408.9689 [1] -586.2071 -828.9728 -581.5084 -861.4063 -882.9622 [1] "Nominal linear calibrations:" [1] "co2scl = 0.883 co2off = 44.35 o2scla = -0.055 o2offa = -149.1" [1] "(dV/V)/(dXO2/XO2) = -3.826" [1] "(dV/V)/d(O2/N2) = -3.025" [1] "Reading in very high resolution timeseries" Read 366160 records [1] 366160 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 05:08:03 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 05:08:05 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.025" [1] "o2scaleavenew_drelVdrelP = -3.826" [1] "median(o2scalenew) = -3.024" [1] "Empirical dV/V vs dP/P relationship =-4.162, r^2 =0.202, damping =1.088" [1] "Tue May 13 05:08:06 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 17732 $icochar [1] "0" "0" "30:29:59" "20:13:07" "126.846677" [6] "126.879361" "126.906047" "126.934833" "126.963018" "126.993603" [11] "127.021243" "127.018790" "127.052673" "127.084157" "127.109045" [16] "127.128235" "127.150424" "127.170513" "127.195401" "127.216990" [21] "127.242477" "20:13:06" "20:13:06" "127.097350" $ecochar [1] "367" "20:13:07" "367" "30:29:59" "126.879361" [6] "126.909046" "126.934833" "126.966916" "126.993603" "127.023588" [11] "127.021906" "127.052673" "127.086556" "127.109045" "127.132433" [16] "127.150424" "127.174711" "127.195401" "127.219989" "127.242477" [21] "127.270963" "126.849112" "126.849112" "127.098250" $flag [1] "all" "LP" "LP" "flight" [5] "a" "b" "c" "d" [9] "e" "f" "donotreporto2" "g" [13] "h" "i" "j" "k" [17] "l" "m" "n" "o" [21] "p" "donotreporto2" "donotreportco2" "screeno2" $ico2 [1] 0.0000 0.0000 127.2708 126.8424 126.8467 126.8794 126.9060 126.9348 [9] 126.9630 126.9936 127.0212 127.0188 127.0527 127.0842 127.1090 127.1282 [17] 127.1504 127.1705 127.1954 127.2170 127.2425 126.8424 126.8424 127.0974 $eco2 [1] 367.0000 126.8424 367.0000 127.2708 126.8794 126.9090 126.9348 126.9669 [9] 126.9936 127.0236 127.0219 127.0527 127.0866 127.1090 127.1324 127.1504 [17] 127.1747 127.1954 127.2200 127.2425 127.2710 126.8491 126.8491 127.0982 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 17731 17731 127.2708 8.012759 0.00035730 0.01228175 0.01228175 17731 17732 17732 127.2708 8.017938 0.00004480 0.01244725 0.01244725 17732 17733 17733 127.2709 8.012841 -0.00041875 0.01274935 0.01274935 17733 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 17731 10.5 1.00 75.00 23990.50 -1 8.017828 8.017978 17732 10.5 4.75 75.75 6006.75 1 8.023249 8.023267 17733 10.5 6.00 76.00 25.50 -1 8.018437 8.018261 vuvsigpdprcorr 17731 8.012838 17732 8.018054 17733 8.012925 [1] 1.270797 1.270824 1.270850 [,1] [,2] [,3] [1,] 1.270808 -1 1 [2,] 1.270817 1 1 [3,] 1.270823 1 6 [4,] 1.270829 1 6 [5,] 1.270835 1 6 [6,] 1.270844 -1 6 [7,] 1.270850 -1 6 [8,] 1.270856 -1 6 [9,] 1.270861 -1 6 [10,] 1.270871 1 6 [11,] 1.270877 1 6 [12,] 1.270883 1 6 [13,] 1.270889 1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 17732 $icochar [1] "0" "0" "30:29:59" "20:13:07" "126.846677" [6] "126.879361" "126.906047" "126.934833" "126.963018" "126.993603" [11] "127.021243" "127.018790" "127.052673" "127.084157" "127.109045" [16] "127.128235" "127.150424" "127.170513" "127.195401" "127.216990" [21] "127.242477" "20:13:06" "20:13:06" "127.097350" $ecochar [1] "367" "20:13:07" "367" "30:29:59" "126.879361" [6] "126.909046" "126.934833" "126.966916" "126.993603" "127.023588" [11] "127.021906" "127.052673" "127.086556" "127.109045" "127.132433" [16] "127.150424" "127.174711" "127.195401" "127.219989" "127.242477" [21] "127.270963" "126.849112" "126.849112" "127.098250" $flag [1] "all" "LP" "LP" "flight" [5] "a" "b" "c" "d" [9] "e" "f" "donotreporto2" "g" [13] "h" "i" "j" "k" [17] "l" "m" "n" "o" [21] "p" "donotreporto2" "donotreportco2" "screeno2" $ico2 [1] 0.0000 0.0000 127.2708 126.8424 126.8467 126.8794 126.9060 126.9348 [9] 126.9630 126.9936 127.0212 127.0188 127.0527 127.0842 127.1090 127.1282 [17] 127.1504 127.1705 127.1954 127.2170 127.2425 126.8424 126.8424 127.0974 $eco2 [1] 367.0000 126.8424 367.0000 127.2708 126.8794 126.9090 126.9348 126.9669 [9] 126.9936 127.0236 127.0219 127.0527 127.0866 127.1090 127.1324 127.1504 [17] 127.1747 127.1954 127.2200 127.2425 127.2710 126.8491 126.8491 127.0982 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 17731 17731 127.2708 8.012759 0.00035730 0.01228175 0.01228175 17731 17732 17732 127.2708 8.017938 0.00004480 0.01244725 0.01244725 17732 17733 17733 127.2709 8.012841 -0.00041875 0.01274935 0.01274935 17733 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 17731 10.5 1.00 75.00 23990.50 -1 8.017828 8.017978 17732 10.5 4.75 75.75 6006.75 1 8.023249 8.023267 17733 10.5 6.00 76.00 25.50 -1 8.018437 8.018261 vuvsigpdprcorr 17731 8.012838 17732 8.018054 17733 8.012925 [1] 1.270797 1.270824 1.270850 [,1] [,2] [,3] [1,] 1.270808 -1 1 [2,] 1.270817 1 1 [3,] 1.270823 1 6 [4,] 1.270829 1 6 [5,] 1.270835 1 6 [6,] 1.270844 -1 6 [7,] 1.270850 -1 6 [8,] 1.270856 -1 6 [9,] 1.270861 -1 6 [10,] 1.270871 1 6 [11,] 1.270877 1 6 [12,] 1.270883 1 6 [13,] 1.270889 1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 05:09:06 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 8215765.141248 SECONDS" [1] "Tue May 13 05:09:06 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -158.327 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 44.815 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -44.9 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 18.379 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 24 [1] 119 [1] 168 [1] 168 [1] 168 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 126.7866 449.25253 1050667.6 1 [2,] 2 126.7866 149.68850 1051132.8 -1 [3,] 3 126.7866 -40.06202 1051189.3 1 [4,] 70 126.7884 -103.74486 1051705.3 -1 [5,] 71 126.7885 -424.31837 1051846.8 1 [6,] 72 126.7885 -724.67787 1051086.2 -1 [7,] 134 126.7902 -804.39348 1051761.2 -1 [8,] 135 126.7902 -494.70382 1052622.3 1 [9,] 136 126.7902 -143.61790 1052525.4 -1 [10,] 138 126.7903 85.86496 1052774.2 -1 [11,] 200 126.7920 -162.19033 1053227.1 -1 [12,] 201 126.7920 -477.42688 1053432.5 1 [13,] 202 126.7920 -773.97110 1052627.4 -1 [14,] 264 126.7937 -850.12414 1053350.6 -1 [15,] 265 126.7937 -616.78234 1054255.6 1 [16,] 266 126.7938 -345.66170 1053937.1 -1 [17,] 268 126.7938 -67.27342 1054242.8 -1 [18,] 392 126.7972 -30.23588 1055577.7 -1 [19,] 393 126.7972 -265.00805 1055612.5 1 [20,] 394 126.7972 -556.62542 1055004.9 -1 [21,] 396 126.7973 -780.36530 1054795.3 -1 [22,] 456 126.7989 -809.70846 1055084.5 -1 [23,] 457 126.7989 -517.55791 1055939.6 1 [24,] 458 126.7989 -206.40542 1055756.4 -1 [25,] 648 126.8041 -57.45697 1056332.0 -1 [26,] 649 126.8042 -404.73909 1056395.0 1 [27,] 650 126.8042 -740.25158 1055614.4 -1 [28,] 710 126.8058 -822.50381 1055512.8 -1 [29,] 711 126.8058 -536.07575 1056385.5 1 [30,] 712 126.8059 -216.48543 1056178.7 -1 [31,] 1030 126.8145 -35.44853 1054666.3 -1 [32,] 1031 126.8146 -285.38046 1054689.8 1 [33,] 1032 126.8146 -586.66856 1054034.0 -1 [34,] 1034 126.8146 -785.78917 1053821.9 -1 [35,] 1158 126.8180 -855.79563 1052629.4 -1 [36,] 1159 126.8181 -591.96886 1053521.4 1 [37,] 1160 126.8181 -279.09078 1053251.7 -1 [38,] 1162 126.8181 -38.78033 1053468.8 -1 [39,] 1284 126.8215 -12.28179 1052384.0 -1 [40,] 1285 126.8215 -260.86263 1052379.8 1 [41,] 1286 126.8215 -552.37894 1051759.4 -1 [42,] 1288 126.8216 -789.98626 1051515.1 -1 [43,] 1348 126.8232 -825.27167 1050730.6 -1 [44,] 1349 126.8233 -540.73284 1051578.7 1 [45,] 1350 126.8233 -220.31721 1051360.7 -1 [46,] 1730 126.8336 -187.21084 1047007.5 -1 [47,] 1731 126.8337 -484.69252 1047217.2 1 [48,] 1732 126.8337 -755.97370 1046407.7 -1 [49,] 1794 126.8354 -683.94429 1045784.6 -1 [50,] 1795 126.8354 -372.89163 1046462.7 1 [51,] 1796 126.8354 -74.77416 1046386.9 -1 [52,] 1800 126.8355 -206.82971 1046196.6 -1 [53,] 1802 126.8356 38.70059 1046438.7 -1 [54,] 2249 126.8479 219.81289 1034636.0 1 [55,] 2250 126.8479 287.82479 1034791.7 -1 [56,] 2251 126.8479 369.09742 1034347.0 1 [57,] 2932 126.8665 -718.95805 1015668.4 -1 [58,] 2998 126.8683 -857.20680 1012083.6 -1 [59,] 2999 126.8683 -533.58046 1012900.8 1 [60,] 3000 126.8684 -105.98712 1012745.9 -1 [61,] 3062 126.8701 -271.13415 1009329.7 -1 [62,] 3063 126.8701 -560.67522 1009584.9 1 [63,] 3064 126.8701 -825.85630 1008698.7 -1 [64,] 3124 126.8717 -862.61579 1005777.9 -1 [65,] 3125 126.8718 -534.35562 1006599.6 1 [66,] 3126 126.8718 -176.34504 1006398.7 -1 [67,] 3188 126.8735 -219.00602 1003620.9 -1 [68,] 3189 126.8735 -465.02599 1003818.0 1 [69,] 3190 126.8735 -675.09461 1003103.0 -1 [70,] 3518 126.8825 -714.81178 997458.6 -1 [71,] 3522 126.8826 -710.14198 997521.2 -1 [72,] 3523 126.8826 -497.66015 998254.5 1 [73,] 3524 126.8827 -243.07288 998049.1 -1 [74,] 3586 126.8844 -392.51847 999203.8 -1 [75,] 3588 126.8844 -807.84942 998871.2 -1 [76,] 4788 126.9173 -728.95680 1003698.5 -1 [77,] 4856 126.9191 -469.19918 1002690.0 -1 [78,] 4858 126.9192 -65.20009 1003009.7 -1 [79,] 5760 126.9437 -693.25661 984661.6 -1 [80,] 5764 126.9438 -683.84493 984644.9 -1 [81,] 5765 126.9438 -391.62327 985311.7 1 [82,] 5766 126.9439 -91.65906 985213.1 -1 [83,] 5828 126.9456 -426.65147 984292.6 -1 [84,] 5830 126.9456 -806.74387 983934.7 -1 [85,] 7028 126.9784 -723.52186 1003909.7 -1 [86,] 7096 126.9803 -591.03229 1004252.8 -1 [87,] 7097 126.9803 -318.43975 1004809.4 1 [88,] 7098 126.9803 -53.61323 1004754.1 -1 [89,] 7746 126.9981 -692.41299 993051.7 -1 [90,] 7750 126.9982 -658.26061 993034.8 -1 [91,] 7751 126.9982 -375.96425 993665.8 1 [92,] 7752 126.9982 -100.62118 993559.1 -1 [93,] 7814 126.9999 -405.08765 992385.4 -1 [94,] 7816 127.0000 -800.54766 992003.0 -1 [95,] 8525 127.0194 -582.20729 990590.7 1 [96,] 8526 127.0194 -592.45476 990197.0 -1 [97,] 8527 127.0194 -704.96199 990981.3 1 [98,] 8667 127.0233 -633.00791 995913.9 1 [99,] 8668 127.0233 -665.00752 995490.2 -1 [100,] 8669 127.0233 -748.81159 996304.2 1 [101,] 9080 127.0346 -718.92725 1010728.0 -1 [102,] 9148 127.0364 -549.14504 1011098.7 -1 [103,] 9150 127.0365 -68.37738 1011544.4 -1 [104,] 9212 127.0382 -461.69152 1010617.1 -1 [105,] 9214 127.0382 -824.50499 1010264.1 -1 [106,] 9276 127.0399 -587.45231 1009680.9 -1 [107,] 9278 127.0400 -48.49340 1010177.1 -1 [108,] 9645 127.0500 -844.18956 1005210.7 1 [109,] 9646 127.0501 -856.42471 1004184.6 -1 [110,] 9647 127.0501 -736.20698 1004879.3 1 [111,] 10100 127.0625 -689.12028 999435.5 -1 [112,] 10106 127.0626 -253.67084 999936.4 -1 [113,] 10168 127.0643 -337.69516 1000114.3 -1 [114,] 10170 127.0644 -794.33990 999714.8 -1 [115,] 11277 127.0946 -749.02937 1008192.2 1 [116,] 11278 127.0947 -868.69934 1007494.3 -1 [117,] 11279 127.0947 -872.73479 1008538.6 1 [118,] 11372 127.0972 -694.52147 1008882.6 -1 [119,] 11412 127.0983 -865.13436 1009043.6 -1 [120,] 11413 127.0983 -837.02833 1009894.4 1 [121,] 11414 127.0983 -783.98167 1008951.8 -1 [122,] 11415 127.0983 -752.44492 1009616.8 1 [123,] 11440 127.0990 -832.44633 1008930.6 -1 [124,] 11441 127.0991 -524.38851 1009770.9 1 [125,] 11442 127.0991 -188.70229 1009603.4 -1 [126,] 11568 127.1025 30.03991 1009132.2 -1 [127,] 11569 127.1025 -263.88102 1009090.5 1 [128,] 11570 127.1025 -571.69129 1008476.1 -1 [129,] 12794 127.1360 -735.23842 998260.8 -1 [130,] 12798 127.1361 -749.76805 998300.9 -1 [131,] 12799 127.1361 -508.53236 999065.8 1 [132,] 12800 127.1361 -219.58168 998885.2 -1 [133,] 12862 127.1378 -244.94925 999675.1 -1 [134,] 12864 127.1379 -796.15814 999190.1 -1 [135,] 13396 127.1524 -676.44430 1002113.2 -1 [136,] 13464 127.1542 -452.30740 999950.4 -1 [137,] 13466 127.1542 -78.65387 1000219.9 -1 [138,] 14722 127.1885 -695.73465 1001929.0 -1 [139,] 14726 127.1887 -658.20585 1001982.7 -1 [140,] 14727 127.1887 -370.60379 1002651.5 1 [141,] 14728 127.1887 -81.26946 1002591.7 -1 [142,] 14790 127.1904 -411.59732 1002499.8 -1 [143,] 14792 127.1905 -812.04039 1002142.2 -1 [144,] 16280 127.2312 -686.01651 988608.7 -1 [145,] 16346 127.2330 -845.49099 989018.0 -1 [146,] 16347 127.2330 -487.72511 989863.2 1 [147,] 16348 127.2331 -120.62107 989769.2 -1 [148,] 16410 127.2348 -408.31508 989491.0 -1 [149,] 16412 127.2348 -844.78826 989087.1 -1 [150,] 16472 127.2364 -874.92643 988634.8 -1 [151,] 16473 127.2365 -489.66919 989485.3 1 [152,] 16474 127.2365 -100.63203 989381.8 -1 [153,] 17723 127.2706 -684.87636 981642.5 1 [154,] 17724 127.2706 -763.91020 980997.3 -1 [155,] 17725 127.2707 -797.23660 981857.9 1 [156,] 17732 127.2709 -631.62962 981200.3 -1 [157,] 17748 127.2713 -525.40666 981295.1 -1 [158,] 17749 127.2713 -302.16334 981801.5 1 [159,] 17750 127.2713 89.47404 981919.0 -1 [160,] 17751 127.2714 638.23267 981806.3 1 [161,] 17752 127.2714 1181.75540 983007.1 -1 [162,] 17754 127.2715 1645.82744 983460.6 -1 [163,] 18122 127.2815 -129.93354 988296.5 -1 [164,] 18123 127.2815 -422.93122 988456.7 1 [165,] 18124 127.2815 -781.22194 987698.3 -1 [166,] 18248 127.2849 -716.68224 990360.9 -1 [167,] 18249 127.2849 -383.43180 991057.3 1 [168,] 18250 127.2850 -66.55426 991014.4 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 15249 127.2030 1.033096e+10 [2,] 16039 127.2246 2.272724e+03 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -158.327 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 39.256 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 38.076 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 16.901 PER MEG" [1] 127.0974 127.0982 [1] "Screened 33 O2 values from screeno2 period 127.09735 to 127.09825" [1] 400.7440 423.7593 393.4095 409.5612 408.9689 [1] -586.2071 -828.9728 -581.5084 -861.4063 -882.9622 [1] "Nominal linear calibrations:" [1] "co2scl = 0.883 co2off = 44.35 o2scla = -0.055 o2offa = -149.1" [1] "(dV/V)/(dXO2/XO2) = -3.823" [1] "(dV/V)/d(O2/N2) = -3.023" [1] "Finding cal and sample periods" [1] "Median Cal: 2.45 minutes" [1] "Average Cal: 2.41 minutes" [1] "Shortest Cal: 0.04 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 3 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 28" [1] "at: 74" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-1HZ_DC8_20180506_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 657450 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-20Hz_DC8_20180506_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 19010212 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00223" [1] "HS CO2 vs. PACAB: m = -0.00212, r^2 = 0.05" [1] "LS CO2 vs. PACAB: m = -0.00235, r^2 = 0.08" [1] "HS+LS LIH2O vs. PACAB: m = -3.1e-05" [1] "HS LIH2O vs. PACAB: m = -3.44e-05, r^2 = 0.36" [1] "LS LIH2O vs. PACAB: m = -2.77e-05, r^2 = 0.31" [1] "HS+LS CO2 vs. LIH2O: m = -8.67" [1] "HS CO2 vs. LIH2O: m = -10.7, r^2 = 0.01" [1] "LS CO2 vs. LIH2O: m = -6.67, r^2 = 0" [1] "APCO2 vs. PACAB: m = 0.00257, r^2 = 0" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0559" [1] "HS O2 vs. PACAB: m = 0.039, r^2 = 0.48" [1] "LS O2 vs. PACAB: m = 0.0728, r^2 = 0.17" [1] "HS+LS O2 vs. LIH2O: m = -293" [1] "HS O2 vs. LIH2O: m = -455, r^2 = 0.4" [1] "LS O2 vs. LIH2O: m = -131, r^2 = 0" [1] "HS+LS O2 vs. PAO2: m = -5.36" [1] "HS O2 vs. PAO2: m = -1.1, r^2 = 0.06" [1] "LS O2 vs. PAO2: m = -9.62, r^2 = 0.48" [1] "HS+LS O2 vs. TPBOX: m = 1.52" [1] "HS O2 vs. TPBOX: m = 0.319, r^2 = 0.07" [1] "LS O2 vs. TPBOX: m = 2.71, r^2 = 0.52" [1] "APO vs. PACAB: m = -0.0361, r^2 = 0" [1] "APO vs. PAO2: m = 3.01, r^2 = 0" [1] "APO vs. TPBOX: m = -3.1, r^2 = 0.02" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.0337, r^2 = 0" [1] "LS CO2 vs. LiCor Cell P: m = -0.0932, r^2 = 0" [1] "HS CO2 vs. CO2 Vol P: m = 0.753, r^2 = 0.43" [1] "LS CO2 vs. CO2 Vol P: m = 0.85, r^2 = 0.59" [1] "HS CO2 vs. SLOPE: m = 0.594, r^2 = 0.05" [1] "LS CO2 vs. SLOPE: m = -0.672, r^2 = 0.06" [1] "HS O2 vs. O2 Vol P: m = -1.15, r^2 = 0.02" [1] "LS O2 vs. O2 Vol P: m = -5.47, r^2 = 0.02" [1] "HS O2 vs. O2 Cell T: m = -0.101, r^2 = 0" [1] "LS O2 vs. O2 Cell T: m = 0.92, r^2 = 0" [1] "HS O2 vs. CO2 Vol P: m = -6.53, r^2 = 0.26" [1] "LS O2 vs. CO2 Vol P: m = -17.6, r^2 = 0.11" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -0.633, r^2 = 0.01" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -0.96, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -6.53, r^2 = 0.26" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -17.6, r^2 = 0.11" [1] "HS O2 vs. LIH2O: m = 147, r^2 = 0.01" [1] "LS O2 vs. LIH2O: m = 2760, r^2 = 0.25" [1] "HS O2 vs. SLOPE: m = -0.424, r^2 = 0.26" [1] "LS O2 vs. SLOPE: m = -1.08, r^2 = 0.89" [1] "HS CO2 vs. Time: m = 20.726, r^2 = 0.95" [1] "LS CO2 vs. Time: m = 20.866, r^2 = 0.95" [1] "HS CO2 vs. Cylinder T: m = 1.663, r^2 = 0.07" [1] "LS CO2 vs. Cylinder T: m = 2.107, r^2 = 0.108" [1] "HS CO2 vs. Regulator T: m = -0.493, r^2 = 0.63" [1] "LS CO2 vs. Regulator T: m = -0.515, r^2 = 0.737" [1] "HS CO2 vs. Ref. Volumes T: m = -0.419, r^2 = 0.15" [1] "LS CO2 vs. Ref. Volumes T: m = -0.5, r^2 = 0.232" [1] "HS CO2 vs. Manifold T: m = -0.142, r^2 = 0.18" [1] "LS CO2 vs. Manifold T: m = -0.193, r^2 = 0.344" [1] "HS CO2 vs. Pump Box T: m = -0.116, r^2 = 0.27" [1] "LS CO2 vs. Pump Box T: m = -0.137, r^2 = 0.4" [1] "HS O2 vs. Cylinder T: m = -12.513, r^2 = 0.03" [1] "LS O2 vs. Cylinder T: m = -30.442, r^2 = 0.009" [1] "HS O2 vs. Regulator T: m = 0.713, r^2 = 0.01" [1] "LS O2 vs. Regulator T: m = 6.375, r^2 = 0.048" [1] "HS O2 vs. Ref. Volumes T: m = -2.88, r^2 = 0.06" [1] "LS O2 vs. Ref. Volumes T: m = -6.143, r^2 = 0.015" [1] "HS O2 vs. Manifold T: m = 0.307, r^2 = 0.01" [1] "LS O2 vs. Manifold T: m = 1.514, r^2 = 0.009" [1] "HS O2 vs. Pump Box T: m = 0.386, r^2 = 0.02" [1] "LS O2 vs. Pump Box T: m = 2.208, r^2 = 0.044" [1] "HS CO2 vs. WT P: m = -0.001, r^2 = 0.01" [1] "LS CO2 vs. WT P: m = -0.002, r^2 = 0.032" [1] "HS CO2 vs. SP P: m = -0.00132, r^2 = 0.02" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.053, r^2 = 0.06" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.054, r^2 = 0.06" [1] "LS CO2 vs. SP P: m = -0.00157, r^2 = 0.04" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.021, r^2 = 0.09" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.02, r^2 = 0.09" [1] "HS CO2 vs. WT FL: m = -0.183, r^2 = 0.43" [1] "LS CO2 vs. WT FL: m = -0.203, r^2 = 0.605" [1] "HS CO2 vs. SP FL: m = -0.045, r^2 = 0.05" [1] "LS CO2 vs. SP FL: m = -0.037, r^2 = 0.041" [1] "HS O2 vs. SLPDIFF: m = 0.14, r^2 = 0.03" [1] "LS O2 vs. SLPDIFF: m = -0.707, r^2 = 0.02" [1] "HS O2 vs. WT P: m = 0.047, r^2 = 0.22" [1] "LS O2 vs. WT P: m = 0.068, r^2 = 0.028" [1] "HS O2 vs. SP P: m = 0.05, r^2 = 0.23" [1] "LS O2 vs. SP P: m = 0.076, r^2 = 0.039" [1] "HS O2 vs. WT FL: m = 0.326, r^2 = 0.01" [1] "LS O2 vs. WT FL: m = 1.209, r^2 = 0.009" [1] "HS O2 vs. SP FL: m = -0.862, r^2 = 0.14" [1] "LS O2 vs. SP FL: m = -0.964, r^2 = 0.012" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 83.97, 49.79" [1] "Empirical LP O2 lag flow(s): 101.6, 105.3" [1] "Empirical LP CO2 lag time(s): 79.22, 47.37" [1] "Empirical LP CO2 lag flow(s): 101.6, 105.3" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.45" [1] "Median all HS CO2 SD = 0.45" [1] "Median all LS CO2 SD = 0.45" [1] "Median all LT CO2 SD = 0.45" [1] "Median all WT CO2 SD = 0.45" [1] "Median all HS or LS CO2 SD = 0.45" [1] "Median all cal O2 SD = 1.75" [1] "Median all HS O2 SD = 1.59" [1] "Median all LS O2 SD = 1.86" [1] "Median all LT O2 SD = 1.54" [1] "Median all WT O2 SD = 1.5" [1] "Median all HS or LS O2 SD = 1.75" [1] "Median all cal CO2 Slope = 0.03" [1] "Median all HS CO2 Slope = -0.02" [1] "Median all LS CO2 Slope = -0.03" [1] "Median all LT CO2 Slope = -0.02" [1] "Median all WT CO2 Slope = 0.08" [1] "Median all HS or LS CO2 Slope = -0.03" [1] "Median all cal O2 Slope = 0.95" [1] "Median all HS O2 Slope = 0.56" [1] "Median all LS O2 Slope = 1.69" [1] "Median all LT O2 Slope = 0.13" [1] "Median all WT O2 Slope = -0.24" [1] "Median all HS or LS O2 Slope = 1.24" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 4.56 per meg" [1] "Initial O2 Calibration Offset = -0.49 per meg" [1] "SD of O2 Calibration (post-takeoff) = 1.87 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -1.78 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -6.23 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 67960.34 111155.93" [1] "Time lag adjustments = 7 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 49.9 at 105.8 sccm" [1] "Median O2 delay + tlagff = 50.6 at 105.8 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 48.7 at 105.8 sccm" [1] "Median O2 delay from 3-way + tlagff = 49.4 at 105.8 sccm" [1] "after calc and ff lag: 67903.34 111103.1" [1] "2025-05-13 17:10:11 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] -7.31184454 -7.31184454 -2.14115868 0.16809280 1.30557036 [6] 1.30557036 0.12580906 -1.96851983 -1.96851983 -2.74318139 [11] -5.62931295 -10.64809553 -10.64809553 -10.64809553 -15.58832060 [16] -6.57308159 -6.57308159 -6.57308159 -6.65928982 -4.73462047 [21] -4.76829824 -4.76829824 -4.76829824 -7.33467991 -9.25933134 [26] -9.25933134 -9.25933134 -9.34945156 -9.96332642 -9.96332642 [31] -9.96332642 -8.57004494 2.14264585 4.83897469 5.55564104 [36] 5.71650964 -5.55628586 -5.55628586 -5.55628586 -5.55628586 [41] -0.31305807 -0.31305807 -0.31305807 -0.31305807 -2.16998964 [46] -3.41901822 -3.41901822 -3.56360153 -3.90538862 -3.43168418 [51] -4.06649341 -4.06649341 -4.06649341 -4.13978466 -4.62765784 [56] -4.62765784 -4.62765784 -10.73800243 -10.73800243 -10.73800243 [61] -9.98244495 -9.54083004 -9.52468763 -9.52468763 -9.52468763 [66] -7.73339187 -0.80811829 -0.16107954 -1.45034239 -5.41632690 [71] -14.65651640 -13.24373932 -13.04761937 -13.04761937 -9.24405808 [76] -9.24405808 -9.22859728 -8.98892548 -3.81068560 -2.22144417 [81] -2.28641283 -2.32420175 -4.38822835 -5.67882486 -11.76318829 [86] -11.76318829 -10.98827767 -7.81745237 -7.81745237 -6.85937740 [91] -3.47411460 -2.89192387 -2.89192387 -2.89192387 -3.57758223 [96] -6.38485341 -6.43147102 -6.42707273 -6.38151573 -5.86600687 [101] -5.66177902 -5.66177902 -5.61854391 -5.88311740 -11.01768524 [106] -11.01768524 -12.77298406 -13.22439430 -11.44124409 -10.89758753 [111] -7.95067685 -6.59133737 -8.88021398 -8.57257884 -7.43067640 [116] -6.60880040 -0.34353518 -0.34353518 -1.99258205 -6.49048056 [121] -5.19656804 -4.47911568 -4.27466912 -3.33665607 -3.33665607 [126] -8.59683358 -7.92510159 -7.20351157 -7.15112427 -4.48273576 [131] -3.94068451 -3.66179042 -3.66179042 -3.91979337 -3.65962916 [136] -3.64639719 -3.64639719 0.53650340 1.93302929 1.93302929 [141] 1.93302929 -2.13673282 -5.12879034 -5.12879034 -5.46096529 [146] -6.35202384 -8.58873765 -8.58873765 -8.58873765 -8.22314881 [151] -7.22478171 -7.11264863 -6.98802629 -6.74358352 -2.71121312 [156] -0.97066907 0.60571383 1.16267906 4.78293622 7.22123593 [161] 7.22123593 7.22123593 7.06168188 -0.53922482 -0.53922482 [166] -0.53922482 -1.03899019 -0.18912143 -0.86563418 -1.53141305 [171] -1.53141305 -0.80585693 -0.75058446 -0.75058446 -0.75058446 [176] -3.24360855 -10.52717414 -11.12424927 -14.48885588 -14.48885588 [181] -9.01785274 -7.12673187 -7.11048587 -9.66081392 -8.99771306 [186] -8.99771306 -8.01926657 -2.17716377 -5.73511791 -5.73511791 [191] -10.98271542 -10.98271542 -7.29597124 -4.48073311 -2.61891490 [196] -1.46632672 -1.46844649 -2.13859141 -2.53483542 -4.26406090 [201] -4.43258939 -0.62380560 -0.62380560 -0.62380560 -0.62380560 [206] -6.97277152 -4.88921096 -4.49304739 -4.49304739 -4.74034560 [211] -4.82213867 -4.45963429 -3.93014182 -3.36967956 -2.64584450 [216] -2.64584450 -3.04538328 -3.10293574 -3.55074982 -4.15871971 [221] -6.38169836 -6.43313177 -4.23196911 -1.38296634 -0.28870270 [226] -0.28870270 -0.61283537 -1.31728017 -1.31728017 -1.31728017 [231] 2.59382497 3.17621318 3.17621318 2.44019035 0.95267901 [236] 0.31303696 0.31303696 0.31303696 0.31303696 2.41670812 [241] 2.14584793 1.84635864 1.74267618 0.95727019 0.95727019 [246] 0.95727019 0.95727019 -1.43435977 -4.44021732 -5.74137393 [251] -6.53910675 -6.53910675 -1.95744962 -2.18114150 -5.41010507 [256] -6.44316582 -0.42403006 -0.12642090 1.31478437 2.72658218 [261] -2.37790280 -2.39358851 -4.09166515 -4.13479134 -9.16257191 [266] -10.92158810 -8.56912992 -8.56912992 -6.68184103 0.30866298 [271] 0.44163885 0.48587436 0.48587436 -3.45370455 -3.48283741 [276] -4.68990440 -5.93996465 -9.09186446 -9.09186446 -9.09186446 [281] -9.14508230 -10.43481022 -10.75764080 -10.75764080 -10.75764080 [286] -10.68343920 -3.03298834 2.28906662 2.28906662 2.28906662 [291] 3.12797529 3.12797529 3.12797529 -1.23951868 -5.74984487 [296] -5.74984487 -5.74984487 -5.74984487 -3.54788752 -0.69090878 [301] 0.13075202 0.30013569 -0.64257644 -7.57476526 -7.68753114 [306] -8.67466263 -8.81269280 -2.15145169 -2.15145169 1.85364380 [311] 1.85364380 -2.71803703 -3.25841457 -5.59505226 -6.28234102 [316] -6.41332832 -6.46103623 -6.46103623 -6.46103623 -3.92671438 [321] -1.26246617 -1.65800484 -2.75065305 -3.77417412 -6.90635277 [326] -6.89324443 -6.86454880 -6.86454880 -4.35344848 -4.35344848 [331] -2.01531242 -0.06032829 -0.80448655 -0.93785834 -0.93785834 [336] -0.93785834 0.02829876 0.41297585 0.41297585 0.41297585 [341] 0.48676425 -0.95515830 -0.25578421 -0.02688600 -0.02688600 [346] -1.99106626 -1.99106626 -3.69421160 -5.12092979 -1.83614524 [351] -1.87234544 -2.47041384 -2.78278690 -2.61516623 -2.31261413 [356] -2.13548869 -2.13548869 -2.13548869 -7.14719212 -8.29330941 [361] -8.29330941 -8.29330941 -11.41566603 -11.43343642 -11.45950216 [366] -11.47461661 -0.63058007 -0.63623829 -0.63936600 -0.63945593 [371] -4.46715999 -5.30441382 -5.30646179 -5.30646179 -5.35206672 [376] -5.55874465 -5.55874465 -5.55874465 -5.55874465 -5.79949878 [381] -5.60203568 -5.15961936 -4.93908253 -2.23594937 -2.13065253 [386] 2.35387564 2.35387564 -3.04614759 -9.16378735 -9.16378735 [391] -7.71459906 -4.55053360 -2.75610631 -2.88677161 -2.90157949 [396] -2.90157949 -2.22363885 -2.22363885 -2.22363885 -2.61103429 [401] -7.34796997 -7.34796997 -7.34796997 -7.34796997 -4.08874746 [406] -0.97010025 -1.19313969 -1.32321867 -1.36478939 -5.21065750 [411] -5.21065750 -5.21065750 -5.21065750 -3.30962174 -3.30962174 [416] -3.30962174 -3.30962174 -7.38850129 -6.88206765 -4.61983202 [421] -3.41867478 0.13985882 1.53118573 1.53118573 1.53118573 [426] 1.53118573 -4.54125380 -5.42224292 -6.17417580 -7.18408513 [431] -4.65982696 -4.65982696 -4.65982696 -4.65982696 -4.81383445 [1] 71.17661 73.33229 76.24804 77.77966 79.25004 80.37956 81.47494 [8] 82.45627 83.50214 84.98702 86.56412 88.25732 90.15983 92.09673 [15] 94.09811 95.98013 97.86169 99.70971 101.15553 102.83859 104.01916 [22] 104.97433 105.57647 105.90715 106.21644 106.46411 106.50820 106.87712 [29] 107.55816 108.28377 109.16811 110.10302 111.12189 112.39029 113.77448 [36] 114.81941 115.45644 116.11264 116.46983 116.35631 116.03165 115.89497 [43] 115.79456 115.87392 116.31338 117.00787 117.77206 118.80910 120.18178 [50] 121.92238 123.53973 125.64428 127.43883 129.26211 130.97931 132.76282 [57] 133.68342 134.57810 135.49028 136.39500 137.40057 138.30261 139.66585 [64] 141.18576 143.19315 145.39159 148.08962 151.12384 154.38965 157.50503 [71] 161.13411 164.42760 167.48412 170.61399 173.35481 176.22807 178.81322 [78] 181.39333 183.96360 187.19305 189.93761 192.30808 194.63903 196.55145 [85] 198.55780 200.14498 201.41587 202.79507 203.79392 205.14823 206.67487 [92] 208.28965 209.92781 211.89585 213.92222 215.83816 218.09422 220.23143 [99] 222.12753 223.89933 225.84569 227.78395 229.81873 231.81077 234.16206 [106] 236.24804 238.28998 240.25705 242.47888 244.57370 246.71493 248.89127 [113] 250.92145 252.81018 254.67649 256.59587 258.08478 259.97098 261.47299 [120] 263.25910 265.13528 266.43442 268.27558 270.21894 271.77318 273.94350 [127] 275.93595 278.20833 280.07234 282.14485 284.51515 286.42476 287.97317 [134] 290.06889 292.14471 293.99177 295.80828 297.67909 299.73426 301.76867 [141] 303.74611 305.98062 307.94772 309.73906 311.83035 313.57213 315.00064 [148] 316.37012 317.56384 318.44487 319.02022 319.20429 319.40887 319.56384 [155] 319.79435 320.25627 320.88014 321.64727 322.33353 322.72876 322.95883 [162] 323.26782 323.74493 324.29416 324.93020 325.66530 326.35741 326.82666 [169] 327.22833 327.63486 327.99272 328.28292 328.57500 328.88854 329.40380 [176] 330.03475 331.27124 332.96079 334.83576 337.00697 339.30340 342.33888 [183] 344.98852 347.51292 349.99375 352.18239 354.11318 356.09785 358.12789 [190] 360.18881 362.01123 363.78481 365.66217 367.34560 368.95970 370.61458 [197] 372.19265 373.65072 374.96190 376.13506 377.19277 378.02970 378.91819 [204] 379.64812 380.73906 381.63278 382.72402 383.68670 384.72045 385.75324 [211] 387.03861 388.19292 389.40266 390.85620 392.42653 393.86127 395.76138 [218] 397.55602 399.44915 401.14830 403.12516 404.64513 406.79951 408.85262 [225] 410.89759 412.76898 414.53650 416.45868 418.10610 420.03892 421.78507 [232] 423.60275 425.73597 427.34384 428.69611 429.69525 430.64976 431.51462 [239] 432.18528 433.03126 433.71970 434.37774 435.05273 435.52943 436.23795 [246] 436.72397 437.37181 438.08179 438.84668 439.91469 440.88496 441.95022 [253] 443.25416 444.74880 446.07520 447.56798 449.00089 450.94276 452.22421 [260] 453.94521 455.39654 457.03785 458.71362 460.00775 461.60430 463.10441 [267] 464.53034 465.69103 467.09842 468.12417 469.28901 470.36839 471.46085 [274] 472.54125 473.55252 474.39471 475.50478 476.57747 477.57624 478.71500 [281] 479.80262 480.94056 482.07938 483.29623 484.36041 485.28493 486.09486 [288] 486.93265 487.66513 488.28554 489.11479 489.96414 490.65292 491.41633 [295] 492.19497 492.96949 493.74737 494.70943 495.60663 496.69464 497.78939 [302] 498.88214 500.06626 501.18139 502.54877 503.76291 505.01077 506.33554 [309] 507.61274 509.34830 510.59575 511.77043 512.82462 513.63681 513.96593 [316] 514.19597 514.42874 514.73720 515.17493 515.85063 516.80818 517.94453 [323] 519.10909 520.86329 522.45992 524.19332 525.77515 527.12859 528.35396 [330] 529.38583 530.13344 530.90208 531.43112 531.87501 532.34436 532.67130 [337] 532.99728 533.34031 533.73819 534.10053 534.44888 534.88010 535.47215 [344] 536.29248 537.03632 538.18279 539.27255 540.58794 541.83862 543.30130 [351] 544.81451 546.20584 547.69228 549.15095 550.67186 551.84876 553.29480 [358] 554.60408 555.86295 557.06928 558.42612 559.34966 560.23968 560.98130 [365] 561.61333 562.06897 562.39812 562.63679 562.76871 562.77251 562.73821 [372] 562.80341 562.90621 563.14735 563.42892 563.79646 564.20024 564.74852 [379] 565.28600 565.95914 566.67128 567.55362 568.66905 569.73050 571.01779 [386] 572.71515 574.13678 575.94130 577.61969 579.48547 581.43427 583.33340 [393] 585.27595 587.27673 588.82897 590.53556 591.99995 593.29792 594.55766 [400] 595.55488 596.64127 597.53003 598.37806 599.34239 600.14530 600.76887 [407] 601.41677 601.91215 602.28833 602.59720 602.80502 603.01372 603.08437 [414] 603.08052 603.21234 603.52765 604.08261 604.76837 605.53472 606.22074 [421] 606.75064 607.18784 607.52494 607.95418 608.40242 609.00663 609.61940 [428] 610.14923 610.49245 610.96725 611.41100 611.86521 612.26501 612.68181 [435] 613.10836 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 25 O2 values from manual exclude period 127.021243 to 127.021906" [1] "Not reporting 25 APO values from manual exclude period 127.021243 to 127.021906" [1] "Not reporting 243 O2 values from manual exclude period 126.842430555556 to 126.849112" [1] "Not reporting 243 APO values from manual exclude period 126.842430555556 to 126.849112" [1] "Not reporting 243 CO2 values from manual exclude period 126.842430555556 to 126.849112" [1] "Not reporting 243 APO values from manual exclude period 126.842430555556 to 126.849112" [1] "Not reporting 58 smoothed O2 values from manual exclude period 127.020600296221 to 127.021272446194" [1] "Not reporting 58 smoothed APO values from manual exclude period 127.020600296221 to 127.021272446194" [1] "Not reporting 45 smoothed O2 values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 45 smoothed APO values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 45 smoothed CO2 values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 45 smoothed APO values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 58 smoothed O2 values from manual exclude period 127.020600296221 to 127.021272446194" [1] "Not reporting 58 smoothed APO values from manual exclude period 127.020600296221 to 127.021272446194" [1] "Not reporting 45 smoothed O2 values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 45 smoothed APO values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 45 smoothed CO2 values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Not reporting 45 smoothed APO values from manual exclude period 126.84179126853 to 126.848490535903" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1805/AO2_DC8_20180506_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 146100 items [1] 6 3653 36525 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] -365.5911 -367.2060 -360.4190 -361.1360 -355.4650 -359.0650 [1] 34808 [1] "Average Date / Time for slice RF06 = 2018-05-07 01:30:52.6889338493347" [1] "sum(lsel) = 2964" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 27.896 802.988 [1] 27.896 802.988 [1] 197.012 972.104 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 712.767" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF06 APO_AO2 range = -345.97,-326.84" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1805/AO2_DC8_20180506_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 146100 items [1] 6 3653 36525 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] -713.9589 -708.0490 -698.7280 -696.3380 -691.0040 -693.9890 [1] 34816 [1] "Average Date / Time for slice RF06 = 2018-05-07 01:30:52.6889338493347" [1] "sum(lsel) = 2964" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 27.896 802.988 [1] 27.896 802.988 [1] 197.012 972.104 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 712.767" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF06 O2_AO2 range = -644.22,-614.58" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1805/AO2_DC8_20180506_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 146100 items [1] 6 3653 36525 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] 416.3167 414.8841 414.4018 413.8102 413.8745 413.7575 [1] 34999 [1] "Average Date / Time for slice RF06 = 2018-05-07 01:30:42.441314458847" [1] "sum(lsel) = 2982" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 27.896 802.988 [1] 27.896 802.988 [1] 197.012 972.104 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 712.767" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF06 CO2_AO2 range = 403.82,406.64" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 38 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"