[1] "2025-05-13 17:02:34 MDT" options [1,] "file" "180501a" [2,] "flight" "RF04" [3,] "project" "ATOM4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "7" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "TRUE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "TRUE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "180501a" [1] "Reading in flight and plotting intervals" Read 18 records [1] "Reading in /scr/raf/stephens/AO2DAT/180501a.mr" Read 14562 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.36 seconds" [1] "New JOGEST = 2.36 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/180501a.hr" Read 58251 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 05:02:35 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 3141 records Read 536 records Read 2575 records [1] "No O2 data for JJ8856 fill 2" [1] "No O2 data for JJ8578 fill 2" [1] "No O2 data for JJ8578 fill 3" [1] "No O2 data for JJ8578 fill 4" [1] "No O2 data for JJ651 fill 2" [1] "No O2 data for JJ651 fill 3" [1] "No O2 data for JJ651 fill 4" [1] "No O2 data for JJ651 fill 5" [1] "No O2 data for JJ22398 fill 3" [1] "No O2 data for JJ22398 fill 5" [1] "No O2 data for JA02405 fill 1" [1] "No O2 data for JA02405 fill 2" [1] "No O2 data for JA02405 fill 3" [1] "No O2 data for JA02405 fill 4" [1] "No O2 data for JA02385 fill 2" [1] "No O2 data for JA02385 fill 3" [1] "No O2 data for JA02385 fill 4" [1] "No O2 data for JA02379 fill 2" [1] "No O2 data for JA02379 fill 3" [1] "No O2 data for JA02379 fill 4" [1] "No O2 data for JA02379 fill 5" [1] "No O2 data for JA02377 fill 2" [1] "No O2 data for JA02377 fill 3" [1] "No O2 data for JA02377 fill 4" [1] "No O2 data for JA02347 fill 1" [1] "No O2 data for JA02347 fill 3" [1] "No O2 data for JA02347 fill 4" [1] "No O2 data for JA02347 fill 5" [1] "No O2 data for FA02361 fill 4" [1] "No O2 data for FA02360 fill 3" [1] "No O2 data for CC328855 fill 1" [1] "No O2 data for CC328855 fill 2" Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 400.74 O2 = -586.4" [1] "position 2 cylinder OK30768 description: LS CO2 = 423.76 O2 = -828.9" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -581.6" [1] "position 4 cylinder OK30770 description: WT CO2 = 409.56 O2 = -861.7" [1] "position 5 cylinder OK30769 description: LP CO2 = 408.97 O2 = -883.5" [1] 400.7440 423.7586 393.4089 409.5578 408.9691 [1] -586.3504 -828.9158 -581.6019 -861.7484 -883.5067 [1] "Nominal linear calibrations:" [1] "co2scl = 0.864 co2off = 53.35 o2scla = -0.055 o2offa = -148" [1] "(dV/V)/(dXO2/XO2) = -3.828" [1] "(dV/V)/d(O2/N2) = -3.026" [1] "Reading in very high resolution timeseries" Read 291240 records [1] 291240 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 05:02:39 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 05:02:41 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.026" [1] "o2scaleavenew_drelVdrelP = -3.828" [1] "median(o2scalenew) = -3.062" [1] "Empirical dV/V vs dP/P relationship =-4.097, r^2 =0.308, damping =1.07" [1] "Tue May 13 05:02:41 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1484 13994 $icochar [1] "0" "0" "27:06:12" "18:54:03" "121.788291" [6] "121.807606" "121.823345" "121.843853" "121.859592" "121.879384" [11] "121.895361" "121.918969" "121.939477" "121.965231" "121.985978" [16] "122.027471" "122.053940" "122.087564" $ecochar [1] "367" "18:54:03" "367" "27:06:12" "121.806414" [6] "121.826922" "121.843853" "121.863169" "121.879384" "121.898700" [11] "121.918969" "121.942816" "121.965231" "121.989078" "122.027471" [16] "122.057040" "122.087564" "122.129533" $flag [1] "all" "LP" "LP" "flight" "a" "b" "c" "d" [9] "e" "f" "g" "h" "i" "j" "k" "l" [17] "m" "n" $ico2 [1] 0.0000 0.0000 122.1293 121.7875 121.7883 121.8076 121.8233 121.8439 [9] 121.8596 121.8794 121.8954 121.9190 121.9395 121.9652 121.9860 122.0275 [17] 122.0539 122.0876 $eco2 [1] 367.0000 121.7875 367.0000 122.1293 121.8064 121.8269 121.8439 121.8632 [9] 121.8794 121.8987 121.9190 121.9428 121.9652 121.9891 122.0275 122.0570 [17] 122.0876 122.1295 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1483 1483 121.7875 8.241828 -0.00133345 -0.00402875 -0.00402875 1483 1484 1484 121.7875 8.240506 -0.00114510 -0.00382470 -0.00382470 1484 1485 1485 121.7876 8.241419 -0.00115400 -0.00384995 -0.00384995 1485 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1483 10.5 6.0 20.0 250.5 -1 8.240681 8.240111 1484 10.5 3.5 20.5 135.5 1 8.239370 8.238881 1485 10.5 1.0 21.0 20.5 -1 8.240271 8.239778 vuvsigpdprcorr 1483 8.241832 1484 8.240515 1485 8.241423 [1] 0.7875034 0.7875307 0.7875577 [,1] [,2] [,3] [1,] 0.787514 -1 6 [2,] 0.787524 1 6 [3,] 0.787530 1 6 [4,] 0.787536 1 1 [5,] 0.787542 1 1 [6,] 0.787551 -1 1 [7,] 0.787557 -1 1 [8,] 0.787563 -1 1 [9,] 0.787569 -1 1 [10,] 0.787578 1 1 [11,] 0.787584 1 1 [12,] 0.787590 1 1 [13,] 0.787596 1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 13993 13993 122.1293 8.175651 0.00027640 0.01630160 0.01630160 13993 13994 13994 122.1293 8.181587 0.00032315 0.01628300 0.01628300 13994 13995 13995 122.1293 8.175888 -0.00119905 0.01643955 0.01643955 13995 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 13993 10.5 1.0 56.0 23310.5 -1 8.182696 8.182816 13994 10.5 3.5 56.5 11665.5 1 8.188633 8.188776 13995 10.5 6.0 57.0 20.5 -1 8.183654 8.183123 vuvsigpdprcorr 13993 8.175612 13994 8.181573 13995 8.175858 [1] 1.129277 1.129304 1.129331 [,1] [,2] [,3] [1,] 1.129288 -1 1 [2,] 1.129298 1 1 [3,] 1.129304 1 1 [4,] 1.129309 1 6 [5,] 1.129315 1 6 [6,] 1.129325 -1 6 [7,] 1.129331 -1 6 [8,] 1.129336 -1 6 [9,] 1.129342 -1 6 [10,] 1.129358 1 6 [11,] 1.129363 1 6 [12,] 1.129369 1 6 [13,] 1.129375 1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1484 13994 $icochar [1] "0" "0" "27:06:12" "18:54:03" "121.788291" [6] "121.807606" "121.823345" "121.843853" "121.859592" "121.879384" [11] "121.895361" "121.918969" "121.939477" "121.965231" "121.985978" [16] "122.027471" "122.053940" "122.087564" $ecochar [1] "367" "18:54:03" "367" "27:06:12" "121.806414" [6] "121.826922" "121.843853" "121.863169" "121.879384" "121.898700" [11] "121.918969" "121.942816" "121.965231" "121.989078" "122.027471" [16] "122.057040" "122.087564" "122.129533" $flag [1] "all" "LP" "LP" "flight" "a" "b" "c" "d" [9] "e" "f" "g" "h" "i" "j" "k" "l" [17] "m" "n" $ico2 [1] 0.0000 0.0000 122.1293 121.7875 121.7883 121.8076 121.8233 121.8439 [9] 121.8596 121.8794 121.8954 121.9190 121.9395 121.9652 121.9860 122.0275 [17] 122.0539 122.0876 $eco2 [1] 367.0000 121.7875 367.0000 122.1293 121.8064 121.8269 121.8439 121.8632 [9] 121.8794 121.8987 121.9190 121.9428 121.9652 121.9891 122.0275 122.0570 [17] 122.0876 122.1295 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1483 1483 121.7875 8.241828 -0.00133345 -0.00402875 -0.00402875 1483 1484 1484 121.7875 8.240506 -0.00114510 -0.00382470 -0.00382470 1484 1485 1485 121.7876 8.241419 -0.00115400 -0.00384995 -0.00384995 1485 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1483 10.5 6.0 20.0 250.5 -1 8.240681 8.240111 1484 10.5 3.5 20.5 135.5 1 8.239370 8.238881 1485 10.5 1.0 21.0 20.5 -1 8.240271 8.239778 vuvsigpdprcorr 1483 8.241832 1484 8.240515 1485 8.241423 [1] 0.7875034 0.7875307 0.7875577 [,1] [,2] [,3] [1,] 0.787514 -1 6 [2,] 0.787524 1 6 [3,] 0.787530 1 6 [4,] 0.787536 1 1 [5,] 0.787542 1 1 [6,] 0.787551 -1 1 [7,] 0.787557 -1 1 [8,] 0.787563 -1 1 [9,] 0.787569 -1 1 [10,] 0.787578 1 1 [11,] 0.787584 1 1 [12,] 0.787590 1 1 [13,] 0.787596 1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 13993 13993 122.1293 8.175651 0.00027640 0.01630160 0.01630160 13993 13994 13994 122.1293 8.181587 0.00032315 0.01628300 0.01628300 13994 13995 13995 122.1293 8.175888 -0.00119905 0.01643955 0.01643955 13995 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 13993 10.5 1.0 56.0 23310.5 -1 8.182696 8.182816 13994 10.5 3.5 56.5 11665.5 1 8.188633 8.188776 13995 10.5 6.0 57.0 20.5 -1 8.183654 8.183123 vuvsigpdprcorr 13993 8.175612 13994 8.181573 13995 8.175858 [1] 1.129277 1.129304 1.129331 [,1] [,2] [,3] [1,] 1.129288 -1 1 [2,] 1.129298 1 1 [3,] 1.129304 1 1 [4,] 1.129309 1 6 [5,] 1.129315 1 6 [6,] 1.129325 -1 6 [7,] 1.129331 -1 6 [8,] 1.129336 -1 6 [9,] 1.129342 -1 6 [10,] 1.129358 1 6 [11,] 1.129363 1 6 [12,] 1.129369 1 6 [13,] 1.129375 1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 05:03:24 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 05:03:24 PM MDT 2025 done recreating mr o2diffs" [1] "Screening 1 LiH2O values less than -10" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 3.5151 3.9772 [1] -3.157519 -2.790668 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -135.541 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 58.621 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 58.696 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -26.172 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 14 [1] 101 [1] 130 [1] 130 [1] 130 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 71 121.7492 -4.0343027 1028878.5 -1 [2,] 72 121.7492 -351.8927399 1028904.1 1 [3,] 73 121.7492 -697.0672866 1028184.7 -1 [4,] 135 121.7509 -792.8152082 1028568.1 -1 [5,] 136 121.7509 -511.3261599 1029398.8 1 [6,] 137 121.7510 -170.3904857 1029257.9 -1 [7,] 139 121.7510 104.9630465 1029521.6 -1 [8,] 201 121.7527 -70.9647139 1029620.6 -1 [9,] 202 121.7527 -403.9190579 1029705.1 1 [10,] 203 121.7527 -728.5690970 1028952.4 -1 [11,] 265 121.7544 -821.1628836 1028968.8 -1 [12,] 266 121.7544 -553.9341520 1029806.7 1 [13,] 267 121.7545 -193.9497747 1029644.2 -1 [14,] 269 121.7545 -0.6295680 1029845.7 -1 [15,] 391 121.7578 11.6556251 1030220.3 -1 [16,] 392 121.7579 -231.0566634 1030205.0 1 [17,] 393 121.7579 -516.8441499 1029653.5 -1 [18,] 455 121.7596 -661.6245472 1029843.3 -1 [19,] 456 121.7596 -348.8937637 1030507.6 1 [20,] 457 121.7596 -40.4320056 1030484.0 -1 [21,] 647 121.7648 52.9120227 1031402.8 -1 [22,] 648 121.7648 -201.1210779 1031347.1 1 [23,] 649 121.7648 -504.4966944 1030800.7 -1 [24,] 651 121.7649 -745.3286539 1030571.8 -1 [25,] 711 121.7665 -783.0019223 1030496.0 -1 [26,] 712 121.7666 -540.0730016 1031296.8 1 [27,] 713 121.7666 -248.7964938 1031075.3 -1 [28,] 715 121.7666 -11.0389660 1031288.5 -1 [29,] 750 121.7676 163.7901958 1031115.2 1 [30,] 751 121.7676 172.8738340 1031421.8 -1 [31,] 752 121.7676 57.3384562 1031401.7 1 [32,] 1031 121.7752 0.9008454 1030809.0 -1 [33,] 1032 121.7752 -228.8476603 1030798.9 1 [34,] 1033 121.7753 -505.3449104 1030251.4 -1 [35,] 1035 121.7753 -737.3799012 1030037.0 -1 [36,] 1159 121.7787 -812.4722088 1029452.0 -1 [37,] 1160 121.7787 -551.4442190 1030273.9 1 [38,] 1161 121.7787 -235.2235271 1030048.0 -1 [39,] 1163 121.7788 31.3861014 1030282.9 -1 [40,] 1287 121.7822 -74.4626284 1027626.9 -1 [41,] 1288 121.7822 -396.1307402 1027694.0 1 [42,] 1289 121.7822 -696.8704809 1026952.7 -1 [43,] 1349 121.7839 -792.1009799 1025261.9 -1 [44,] 1350 121.7839 -547.9997077 1026058.9 1 [45,] 1351 121.7839 -256.5841950 1025807.0 -1 [46,] 2051 121.8030 -573.7801796 1001278.9 -1 [47,] 2057 121.8032 -129.5159087 1001531.1 -1 [48,] 2119 121.8049 -170.3708659 999374.0 -1 [49,] 2120 121.8049 -457.2707554 999534.2 1 [50,] 2121 121.8049 -743.7709223 998754.8 -1 [51,] 3168 121.8336 -548.9414053 971754.5 1 [52,] 3169 121.8336 -430.0271143 971150.8 -1 [53,] 3170 121.8337 -585.9993578 971351.3 1 [54,] 3171 121.8337 -870.0531815 970599.7 -1 [55,] 3172 121.8337 -869.6534049 971615.9 1 [56,] 3373 121.8392 -569.9306197 971051.3 -1 [57,] 3441 121.8411 -653.3848808 970677.6 -1 [58,] 3442 121.8411 -327.0762609 971274.6 1 [59,] 3443 121.8411 -37.6658955 971246.0 -1 [60,] 3503 121.8427 -18.8525145 970907.8 -1 [61,] 3504 121.8428 -414.0823916 970920.4 1 [62,] 3505 121.8428 -742.3351070 970175.7 -1 [63,] 3567 121.8445 -663.3829983 969758.1 -1 [64,] 3568 121.8445 -338.5158441 970360.0 1 [65,] 3569 121.8445 -45.8210339 970314.0 -1 [66,] 3629 121.8462 22.4735980 969785.7 -1 [67,] 3630 121.8462 -214.5227066 969754.3 1 [68,] 3631 121.8462 -460.8429261 969272.5 -1 [69,] 4645 121.8739 -618.1388420 968613.5 -1 [70,] 4649 121.8740 -580.7976277 968706.6 -1 [71,] 4650 121.8741 -336.5846881 969281.5 1 [72,] 4651 121.8741 -47.3258982 969262.3 -1 [73,] 4711 121.8757 -36.5977502 969991.4 -1 [74,] 4712 121.8757 -343.6296876 970039.0 1 [75,] 4713 121.8758 -674.1738173 969369.0 -1 [76,] 5977 121.9102 -631.6960480 967377.8 -1 [77,] 6043 121.9120 -853.8660263 967863.4 -1 [78,] 6044 121.9120 -513.3635760 968698.1 1 [79,] 6045 121.9121 -156.9726738 968577.8 -1 [80,] 6169 121.9154 27.2295874 969625.1 -1 [81,] 6170 121.9154 -259.3134733 969606.8 1 [82,] 6171 121.9155 -545.5142246 969066.9 -1 [83,] 7469 121.9509 -668.8243025 971994.0 -1 [84,] 7475 121.9510 -251.6326477 972478.7 -1 [85,] 7477 121.9511 -32.4501765 972681.1 -1 [86,] 7537 121.9527 -43.5925088 973415.9 -1 [87,] 7538 121.9527 -390.5034964 973483.1 1 [88,] 7539 121.9528 -742.8034590 972768.2 -1 [89,] 8897 121.9899 -682.8051086 986441.7 -1 [90,] 8965 121.9918 -741.3370073 988210.9 -1 [91,] 8966 121.9918 -381.9260181 988950.4 1 [92,] 8967 121.9919 -65.5419337 988924.0 -1 [93,] 10165 122.0246 -620.0110249 1011748.9 -1 [94,] 10171 122.0248 -256.7939564 1012129.8 -1 [95,] 10173 122.0249 -24.9417779 1012329.9 -1 [96,] 10233 122.0265 -402.1813017 1011625.6 -1 [97,] 10235 122.0266 -786.3304897 1011263.5 -1 [98,] 11465 122.0601 -671.3806020 1000484.0 -1 [99,] 11533 122.0619 -839.4527851 1000514.4 -1 [100,] 11534 122.0619 -485.7874762 1001362.3 1 [101,] 11535 122.0620 -130.4904067 1001258.3 -1 [102,] 11597 122.0637 -43.2456867 1001920.5 -1 [103,] 11598 122.0637 -375.4664577 1001967.5 1 [104,] 11599 122.0637 -731.6056812 1001224.2 -1 [105,] 12577 122.0905 -603.7962305 1017400.2 -1 [106,] 12583 122.0907 -816.6655070 1017132.1 -1 [107,] 12643 122.0923 -838.4680205 1016965.1 -1 [108,] 12644 122.0924 -504.4453152 1017822.1 1 [109,] 12645 122.0924 -132.9131173 1017692.2 -1 [110,] 12707 122.0941 -358.8675343 1017201.4 -1 [111,] 12709 122.0941 -816.8788933 1016761.9 -1 [112,] 12769 122.0958 -861.4565736 1016465.6 -1 [113,] 12770 122.0958 -524.8996621 1017342.9 1 [114,] 12771 122.0958 -150.0082650 1017212.0 -1 [115,] 13986 122.1291 -644.0009072 1014569.3 1 [116,] 13987 122.1291 -727.8268704 1014077.6 -1 [117,] 13988 122.1291 -820.2927052 1015031.8 1 [118,] 13995 122.1293 -698.8465957 1014326.9 -1 [119,] 14013 122.1298 -269.3790996 1014976.0 -1 [120,] 14015 122.1299 14.9440560 1015289.2 -1 [121,] 14017 122.1299 247.7193297 1015556.3 -1 [122,] 14298 122.1376 78.1629117 1026293.5 1 [123,] 14299 122.1376 80.0847509 1026473.9 -1 [124,] 14300 122.1377 49.4248526 1026494.9 1 [125,] 14375 122.1397 -69.0495621 1030660.3 -1 [126,] 14376 122.1397 -396.4156337 1030793.8 1 [127,] 14377 122.1398 -732.9096176 1030077.7 -1 [128,] 14501 122.1431 -766.6843581 1036804.2 -1 [129,] 14502 122.1431 -418.7414128 1037641.2 1 [130,] 14503 122.1432 -78.8672911 1037619.8 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 3458 121.8415 1.073100e+08 [2,] 9824 122.0153 1.330104e+03 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -135.541 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -32.367 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -31.837 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 22.698 PER MEG" [1] 400.7440 423.7586 393.4089 409.5578 408.9691 [1] -586.3504 -828.9158 -581.6019 -861.7484 -883.5067 [1] "Nominal linear calibrations:" [1] "co2scl = 0.864 co2off = 53.28 o2scla = -0.054 o2offa = -148" [1] "(dV/V)/(dXO2/XO2) = -3.848" [1] "(dV/V)/d(O2/N2) = -3.042" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.34 minutes" [1] "Shortest Cal: 0.08 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 3 calibration period(s) with less than 30 seconds of data" [1] "at: 21" [1] "at: 43" [1] "at: 55" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-1HZ_DC8_20180501_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 530028 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-20Hz_DC8_20180501_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 15329002 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.0048" [1] "HS CO2 vs. PACAB: m = -0.00443, r^2 = 0.72" [1] "LS CO2 vs. PACAB: m = -0.00517, r^2 = 0.76" [1] "HS+LS LIH2O vs. PACAB: m = -2.52e-05" [1] "HS LIH2O vs. PACAB: m = -3.25e-05, r^2 = 0.29" [1] "LS LIH2O vs. PACAB: m = -1.78e-05, r^2 = 0.08" [1] "HS+LS CO2 vs. LIH2O: m = 40.5" [1] "HS CO2 vs. LIH2O: m = 37, r^2 = 0.17" [1] "LS CO2 vs. LIH2O: m = 43.9, r^2 = 0.23" [1] "APCO2 vs. PACAB: m = 0.0016, r^2 = 0" [1] "Correcting for PCAB effect on LI840 using average of HS and LS fits = -0.0048" [1] "HS+LS CO2 vs. PACAB postcorr: m = 5.23e-05" [1] "HS CO2 vs. PACAB postcorr: m = 0.000231, r^2 = 0.01" [1] "LS CO2 vs. PACAB postcorr: m = -0.000127, r^2 = 0" [1] "HS+LS LIH2O vs. PACAB postcorr: m = -2.54e-21" [1] "HS LIH2O vs. PACAB postcorr: m = -7.38e-06, r^2 = 0.02" [1] "LS LIH2O vs. PACAB postcorr: m = 7.38e-06, r^2 = 0.01" [1] "HS+LS CO2 vs. LIH2O postcorr: m = 9.85" [1] "HS CO2 vs. LIH2O postcorr: m = -2.92, r^2 = 0" [1] "LS CO2 vs. LIH2O postcorr: m = 22.6, r^2 = 0.26" [1] "APCO2 vs. PACAB postcorr: m = 0.00709, r^2 = 0.01" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.00408" [1] "HS O2 vs. PACAB: m = -0.0173, r^2 = 0.03" [1] "LS O2 vs. PACAB: m = 0.0254, r^2 = 0.12" [1] "HS+LS O2 vs. LIH2O: m = -492" [1] "HS O2 vs. LIH2O: m = -1220, r^2 = 0.41" [1] "LS O2 vs. LIH2O: m = 232, r^2 = 0.03" [1] "HS+LS O2 vs. PAO2: m = -6.81" [1] "HS O2 vs. PAO2: m = -12, r^2 = 0.48" [1] "LS O2 vs. PAO2: m = -1.59, r^2 = 0.02" [1] "HS+LS O2 vs. TPBOX: m = 1.75" [1] "HS O2 vs. TPBOX: m = 1.77, r^2 = 0.09" [1] "LS O2 vs. TPBOX: m = 1.73, r^2 = 0.24" [1] "APO vs. PACAB: m = -0.0956, r^2 = 0.01" [1] "APO vs. PAO2: m = -28.4, r^2 = 0.59" [1] "APO vs. TPBOX: m = 9, r^2 = 0.47" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.493, r^2 = 0.39" [1] "LS CO2 vs. LiCor Cell P: m = 0.329, r^2 = 0.23" [1] "HS CO2 vs. CO2 Vol P: m = 0.43, r^2 = 0.51" [1] "LS CO2 vs. CO2 Vol P: m = 0.413, r^2 = 0.64" [1] "HS CO2 vs. SLOPE: m = -1.29, r^2 = 0.26" [1] "LS CO2 vs. SLOPE: m = 0.288, r^2 = 0.03" [1] "HS O2 vs. O2 Vol P: m = -10.8, r^2 = 0.39" [1] "LS O2 vs. O2 Vol P: m = -0.608, r^2 = 0" [1] "HS O2 vs. O2 Cell T: m = 4.33, r^2 = 0.29" [1] "LS O2 vs. O2 Cell T: m = -2.03, r^2 = 0.01" [1] "HS O2 vs. CO2 Vol P: m = -8.61, r^2 = 0.28" [1] "LS O2 vs. CO2 Vol P: m = -7.81, r^2 = 0.03" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -1.39, r^2 = 0.01" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -1.64, r^2 = 0.03" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -8.61, r^2 = 0.28" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -7.81, r^2 = 0.03" [1] "HS O2 vs. LIH2O: m = -456, r^2 = 0.12" [1] "LS O2 vs. LIH2O: m = 2180, r^2 = 0.6" [1] "HS O2 vs. SLOPE: m = -0.887, r^2 = 0.11" [1] "LS O2 vs. SLOPE: m = -1.1, r^2 = 0.72" [1] "HS CO2 vs. Time: m = 12.678, r^2 = 0.7" [1] "LS CO2 vs. Time: m = 13.151, r^2 = 0.71" [1] "HS CO2 vs. Cylinder T: m = 0.437, r^2 = 0.1" [1] "LS CO2 vs. Cylinder T: m = 0.406, r^2 = 0.119" [1] "HS CO2 vs. Regulator T: m = -0.08, r^2 = 0.01" [1] "LS CO2 vs. Regulator T: m = -0.309, r^2 = 0.187" [1] "HS CO2 vs. Ref. Volumes T: m = 0.087, r^2 = 0.02" [1] "LS CO2 vs. Ref. Volumes T: m = -0.002, r^2 = 0" [1] "HS CO2 vs. Manifold T: m = -0.126, r^2 = 0.17" [1] "LS CO2 vs. Manifold T: m = -0.177, r^2 = 0.429" [1] "HS CO2 vs. Pump Box T: m = -0.059, r^2 = 0.07" [1] "LS CO2 vs. Pump Box T: m = -0.078, r^2 = 0.209" [1] "HS O2 vs. Cylinder T: m = -10.016, r^2 = 0.07" [1] "LS O2 vs. Cylinder T: m = -16.125, r^2 = 0.027" [1] "HS O2 vs. Regulator T: m = 6.401, r^2 = 0.07" [1] "LS O2 vs. Regulator T: m = -5.036, r^2 = 0.007" [1] "HS O2 vs. Ref. Volumes T: m = 1.667, r^2 = 0.01" [1] "LS O2 vs. Ref. Volumes T: m = -7.534, r^2 = 0.041" [1] "HS O2 vs. Manifold T: m = 4.59, r^2 = 0.31" [1] "LS O2 vs. Manifold T: m = -0.86, r^2 = 0.001" [1] "HS O2 vs. Pump Box T: m = 2.089, r^2 = 0.13" [1] "LS O2 vs. Pump Box T: m = 0.516, r^2 = 0.001" [1] "HS CO2 vs. WT P: m = 0, r^2 = 0.01" [1] "LS CO2 vs. WT P: m = 0, r^2 = 0.003" [1] "HS CO2 vs. SP P: m = 0.00029, r^2 = 0.01" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.045, r^2 = 0.16" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.045, r^2 = 0.16" [1] "LS CO2 vs. SP P: m = 2.31e-05, r^2 = 0" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.012, r^2 = 0.17" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.009, r^2 = 0.17" [1] "HS CO2 vs. WT FL: m = -0.095, r^2 = 0.09" [1] "LS CO2 vs. WT FL: m = -0.154, r^2 = 0.331" [1] "HS CO2 vs. SP FL: m = -0.01, r^2 = 0.01" [1] "LS CO2 vs. SP FL: m = -0.01, r^2 = 0.021" [1] "HS O2 vs. SLPDIFF: m = 0.31, r^2 = 0.02" [1] "LS O2 vs. SLPDIFF: m = -0.509, r^2 = 0.012" [1] "HS O2 vs. WT P: m = -0.018, r^2 = 0.03" [1] "LS O2 vs. WT P: m = 0.014, r^2 = 0.003" [1] "HS O2 vs. SP P: m = -0.017, r^2 = 0.03" [1] "LS O2 vs. SP P: m = 0.017, r^2 = 0.007" [1] "HS O2 vs. WT FL: m = 4.122, r^2 = 0.25" [1] "LS O2 vs. WT FL: m = -4.11, r^2 = 0.034" [1] "HS O2 vs. SP FL: m = 0.555, r^2 = 0.07" [1] "LS O2 vs. SP FL: m = -0.467, r^2 = 0.007" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 51.95, 50.06" [1] "Empirical LP O2 lag flow(s): 109.9, 95.7" [1] "Empirical LP CO2 lag time(s): 42.45, 52.4" [1] "Empirical LP CO2 lag flow(s): 109.9, 95.7" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.42" [1] "Median all HS CO2 SD = 0.42" [1] "Median all LS CO2 SD = 0.39" [1] "Median all LT CO2 SD = 0.45" [1] "Median all WT CO2 SD = 0.45" [1] "Median all HS or LS CO2 SD = 0.41" [1] "Median all cal O2 SD = 2.09" [1] "Median all HS O2 SD = 1.69" [1] "Median all LS O2 SD = 2.45" [1] "Median all LT O2 SD = 1.53" [1] "Median all WT O2 SD = 1.52" [1] "Median all HS or LS O2 SD = 2.07" [1] "Median all cal CO2 Slope = 0.03" [1] "Median all HS CO2 Slope = -0.01" [1] "Median all LS CO2 Slope = 0.04" [1] "Median all LT CO2 Slope = 0.07" [1] "Median all WT CO2 Slope = 0.05" [1] "Median all HS or LS CO2 Slope = 0.01" [1] "Median all cal O2 Slope = 0.5" [1] "Median all HS O2 Slope = 0.07" [1] "Median all LS O2 Slope = 3.66" [1] "Median all LT O2 Slope = 0.66" [1] "Median all WT O2 Slope = -0.52" [1] "Median all HS or LS O2 Slope = 0.91" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 10.51 per meg" [1] "Initial O2 Calibration Offset = -0.35 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.55 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -5.26 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -21.31 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 64555.66 98908.39" [1] "Time lag adjustments = 7 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 50.8 at 104.5 sccm" [1] "Median O2 delay + tlagff = 51.5 at 104.5 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 49 at 104.5 sccm" [1] "Median O2 delay from 3-way + tlagff = 49.7 at 104.5 sccm" [1] "after calc and ff lag: 64502.39 98853.62" [1] "2025-05-13 17:04:11 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] -3.5906467 -3.5906467 -6.9025996 -6.6535397 -4.1798145 -4.0707496 [7] -1.4143357 8.7194869 8.7194869 8.7194869 8.7194869 1.3555494 [13] 1.9732540 3.0706823 3.0706823 6.9675888 -0.1679652 -0.1679652 [19] 0.4735215 3.5754627 4.2388946 7.8472502 7.8472502 7.4773997 [25] 8.4520528 7.0778833 -2.3711899 -4.0577447 -1.7039558 -1.6912463 [31] -3.5945880 -8.5270215 -13.4135119 -12.7250471 -10.5303636 -9.7107974 [37] -10.3427445 -10.3427445 -3.5239347 1.0528418 -3.0925879 -4.8448335 [43] -10.2540743 -10.2540743 -14.2841431 -12.4443768 -10.0541675 -6.9257253 [49] -7.4026580 -13.0349729 -13.1239768 -13.2567807 -15.0890494 -3.8212627 [55] -3.5782118 -1.3958848 -1.3135372 2.7290133 2.7290133 6.8733359 [61] 7.4569088 2.5762514 2.5762514 -2.2178594 -9.1368458 -8.6631099 [67] -4.8015058 -4.1502061 -2.5358505 -2.5358505 -4.3043604 -0.9822559 [73] -0.9822559 -6.4470175 -2.9568554 -3.0028862 -3.2117124 -3.2129070 [79] -1.6534791 -3.1677054 -3.2857734 -3.9156047 -9.0637110 -5.6328008 [85] -5.6328008 -5.6328008 -8.0792651 -10.0069868 -10.0069868 -10.7916426 [91] -14.5827136 -10.9069825 -10.9069825 -10.9069825 -3.2910114 -6.9727157 [97] -6.9727157 -5.6816201 -1.1622882 -3.3036342 -6.5847505 -11.2222111 [103] -11.2222111 -7.0790208 -9.1223007 -9.1223007 -9.1223007 -2.5852680 [109] -0.3550939 -0.3550939 -1.9401233 -8.7161152 -18.2452826 -18.2452826 [115] -18.2452826 -18.2452826 -14.1111834 -14.1111834 -14.1111834 -16.0454690 [121] -14.3778608 -14.3834959 -14.3834959 -14.3834959 -15.9417706 -17.8595697 [127] -17.4331363 -17.1324928 -15.6696646 -12.2655963 -11.6082652 -10.6769730 [133] -10.4608780 -8.7029151 -8.7234873 -8.8720884 -11.3967341 -8.5342485 [139] -8.5342485 -8.5342485 -8.2628282 -13.2099820 -14.4205708 -14.4205708 [145] -14.4205708 -14.5695804 -14.9909766 -14.9909766 -14.9909766 -12.9507357 [151] -3.9065788 -3.9065788 -3.9065788 -3.9141084 -1.5397940 -1.5794024 [157] -1.5794024 -1.8488462 -9.1584706 -9.6314149 -9.6314149 -9.6314149 [163] -10.2483503 -8.9190133 -8.9190133 -8.9190133 -6.0766925 6.8342331 [169] 6.8342331 6.8342331 4.2380354 -6.5411887 -8.0517435 -8.0517435 [175] -7.6506200 -5.8855388 -5.8855388 -5.8855388 -6.9082818 -2.8103840 [181] -2.8103840 -2.8103840 -2.8103840 -3.7154798 -3.8721586 -3.8721586 [187] -3.8721586 -3.5142878 -2.1525531 -3.1859598 -3.3977349 -3.4307884 [193] -13.1004919 -13.0872234 -12.6881445 -11.6743618 -5.2977543 -5.2977543 [199] -5.2977543 -6.0130636 -6.9974124 -5.7171345 -5.7171345 -7.7700513 [205] -11.8216140 -15.9926782 -8.9800103 -5.9758855 -5.9758855 -1.3008357 [211] -4.2355600 -6.7270834 -6.7270834 -7.1347525 -7.7479220 -9.5168487 [217] -9.5168487 -13.8140690 -12.2729685 -4.2951196 -4.2951196 -3.8798772 [223] -2.9284234 -3.7901695 -4.1359583 -4.1359583 -1.9575731 -5.3464678 [229] -8.9854490 -8.9854490 -16.6833170 -11.0035576 -7.9580153 -7.9580153 [235] -10.6435878 -10.6435878 -10.6435878 -11.1636350 -15.9486299 -23.0498794 [241] -23.0498794 -23.0498794 -23.0498794 -20.8428849 -20.8428849 -20.8428849 [247] -22.4106766 -26.0453249 -26.0453249 -26.0453249 -26.0453249 -26.2735857 [253] -25.7262915 -23.4274076 -22.5454809 -22.5454809 -14.0756346 -12.8879798 [259] -9.9768106 -9.9768106 -11.7230074 -11.7230074 -12.1144158 -13.1543808 [265] -16.1906965 -16.1906965 -16.1906965 -16.2863278 -20.6385816 -22.3912143 [271] -22.4258900 -22.4258900 -19.3430332 -12.2610907 -10.4776327 -10.4776327 [277] -10.4776327 -12.0735016 -12.9004188 -21.5580110 -23.6196458 -33.3375302 [283] -33.3375302 -33.3375302 -33.3375302 -25.4048965 -19.4584587 -17.6079218 [289] -15.6238742 -14.8359199 -17.3778368 -17.3778368 -17.3778368 -17.3778368 [295] -20.6370082 -20.6370082 -20.6370082 -20.6370082 -20.8195988 -20.8257473 [301] -20.3374394 -18.5952964 -16.9880368 -11.9653423 -11.9653423 -12.3091232 [307] -13.7685479 -22.9150155 -22.9150155 -20.3302029 -12.9231659 -17.1049937 [313] -16.9651191 -15.8576464 -15.8576464 -12.1282299 -14.8682660 -14.8682660 [319] -14.8682660 -5.9864841 -7.7686359 -10.1548853 -10.1548853 -13.0250751 [325] -15.4897032 -9.3466186 -9.3466186 -9.3466186 -11.4594438 -13.8152193 [331] -13.8152193 -14.0040878 -12.1727565 -13.3859644 -13.3859644 -12.8007824 [337] -16.1936721 -14.1478036 -14.0308660 -14.0308660 -10.2043985 -7.3812507 [343] -7.3812507 -7.3812507 -5.5039231 -6.2029890 -6.2029890 -6.2029890 [349] -6.2029890 -2.4993508 -3.4405632 -3.4405632 -3.4405632 -3.5977088 [355] -2.0345477 0.6430286 1.5648881 2.1771848 2.8920373 -1.5691771 [361] -1.8949210 -1.3461517 1.9572577 1.9572577 1.5934417 0.9895767 [367] 4.1070225 4.1070225 4.1070225 4.1070225 -8.5840810 -8.5840810 [373] -8.5840810 -8.5840810 -3.8835976 -1.8612187 -1.8502928 -1.8502928 [379] -1.7945056 1.0408622 1.7499867 1.9096428 1.9096428 -4.0166882 [385] -4.0166882 -4.0818407 -4.9393168 -3.4685028 -3.4685028 -3.4685028 [1] 46.10439 47.90921 49.37128 50.83626 52.26417 54.23150 55.14761 [8] 56.07141 56.93890 57.54968 58.40085 59.44826 60.96636 62.95169 [15] 65.63625 68.54664 71.95882 75.39377 78.85754 82.57158 86.38443 [22] 89.80760 93.45993 96.99422 100.78023 104.45673 108.50890 112.05780 [29] 115.43568 118.84867 122.01409 124.76886 127.68806 130.31264 132.53931 [36] 134.66514 136.45849 138.57673 140.66213 142.82505 145.20344 147.86256 [43] 150.78470 153.96952 157.18962 160.61596 164.39346 167.88258 171.39577 [50] 174.38432 177.80008 180.74111 184.04267 186.41257 188.55650 190.53193 [57] 192.26963 194.29611 196.05273 197.89480 199.68391 201.46148 203.40237 [64] 205.36906 207.41260 209.24289 211.41082 213.54659 215.53936 218.13275 [71] 220.70526 223.15858 226.18244 229.14289 232.26499 235.22745 238.30833 [78] 241.79574 245.03395 248.35635 251.34438 254.08564 257.26592 260.03027 [85] 262.77191 264.89464 267.35033 269.53080 271.52461 273.60631 275.50483 [92] 277.25934 279.00543 280.84293 282.57945 284.29008 286.05635 288.11267 [99] 290.39352 292.80029 295.34732 297.94896 300.27316 303.04103 305.01157 [106] 306.92977 308.66404 310.64796 312.54177 314.41380 316.12998 317.60291 [113] 318.67713 319.70299 320.31340 320.76614 321.13485 321.62298 322.23878 [120] 323.20425 324.17154 325.24804 326.61295 327.73568 328.64511 329.34052 [127] 329.76699 330.06765 330.44378 330.72663 331.29927 332.11056 333.17451 [134] 334.40343 335.68828 337.05822 338.46005 340.04711 341.46078 342.77231 [141] 344.10047 345.03407 345.79313 346.29773 346.79559 347.17225 347.65312 [148] 348.43773 349.25560 350.51338 351.85139 353.29470 354.67160 356.44872 [155] 358.55050 360.33956 362.02737 363.76578 365.34808 366.89860 368.38019 [162] 369.64730 371.27121 372.67712 374.07445 375.59704 377.00287 378.43170 [169] 380.01425 381.60876 383.30899 384.98695 386.74580 388.57487 390.35921 [176] 392.05960 393.73496 395.22751 396.72316 398.39525 399.63476 401.04108 [183] 402.21994 403.55587 404.87274 406.06491 407.21571 408.37566 409.57485 [190] 410.58260 411.61894 412.66620 413.71529 414.75485 415.81343 416.95406 [197] 418.16900 419.40936 420.61266 422.05484 423.60496 425.28441 426.98474 [204] 428.79541 430.86013 432.73009 434.53501 436.26826 437.84530 439.33104 [211] 440.77507 442.25624 443.67744 445.10694 446.53498 447.89667 449.24918 [218] 450.62553 451.88128 453.38437 454.77085 456.18615 457.51060 458.89575 [225] 460.26830 461.86900 463.30682 464.71301 466.17162 467.56066 469.22417 [232] 470.36108 471.40869 472.33086 473.16642 473.91827 474.58976 475.19691 [239] 475.84972 476.41389 476.99198 477.56066 478.09345 478.71484 479.36984 [246] 480.06986 480.95116 481.83907 482.80450 483.74095 484.72594 485.61667 [253] 486.84448 487.90664 488.98387 490.00722 491.37150 492.50214 493.63579 [260] 494.69373 495.73606 496.75603 497.66798 498.61807 499.59581 500.66837 [267] 501.59307 502.60291 503.79309 504.93491 506.19548 507.39237 508.59957 [274] 509.69133 510.79554 511.79887 512.78303 513.63761 514.53989 515.35924 [281] 516.12163 516.84895 517.57279 518.13260 518.61941 519.13851 519.61744 [288] 520.09882 520.61492 521.00214 521.35417 521.65965 521.89276 522.09092 [295] 522.28995 522.53838 522.74437 522.98766 523.40348 523.86998 524.73930 [302] 525.67653 526.71667 527.87844 529.20789 530.58333 531.92796 533.68814 [309] 535.14751 536.48439 538.33950 539.79089 541.32464 543.02395 544.52990 [316] 545.97805 547.30495 548.57041 549.76168 551.06058 552.16693 553.43120 [323] 554.63037 555.82208 556.89722 557.98726 559.22555 560.38977 561.77520 [330] 563.19442 564.54593 565.98643 567.67647 569.02518 570.31178 571.46048 [337] 572.29226 573.14378 573.76234 574.31163 574.81537 575.37045 575.93518 [344] 576.60902 577.31519 578.09896 578.92036 579.73383 580.54070 581.37523 [351] 582.27710 583.31584 584.28734 585.27390 586.35840 587.41027 588.44263 [358] 589.63914 590.88867 591.98102 592.95120 593.76413 594.56929 595.16066 [365] 595.68379 596.26027 596.66441 597.05650 597.29677 597.56165 597.95290 [372] 598.54311 598.99137 599.76752 600.73118 601.83399 602.85581 603.72210 [379] 604.45169 605.45388 606.22891 606.99466 607.60990 608.35743 609.02808 [386] 609.76768 610.67643 611.34493 612.18833 612.80919 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1805/AO2_DC8_20180501_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 117784 items [1] 4 2946 29446 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] -365.5911 -367.2060 -360.4190 -361.1360 -355.4650 -359.0650 [1] 34819 [1] "Average Date / Time for slice RF04 = 2018-05-01 23:03:33.4715447425842" [1] "sum(lsel) = 2460" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 1.244 795.437 [1] 1.244 795.437 [1] 204.563 998.756 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 724.952" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF04 APO_AO2 range = -364.35,-324.88" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1805/AO2_DC8_20180501_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 117784 items [1] 4 2946 29446 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] -713.9589 -708.0490 -698.7280 -696.3380 -691.0040 -693.9890 [1] 34828 [1] "Average Date / Time for slice RF04 = 2018-05-01 23:03:33.4715447425842" [1] "sum(lsel) = 2460" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 1.244 795.437 [1] 1.244 795.437 [1] 204.563 998.756 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 724.952" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF04 O2_AO2 range = -702.8,-620.05" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1805/AO2_DC8_20180501_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 117784 items [1] 4 2946 29446 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] 416.3167 414.8841 414.4018 413.8102 413.8745 413.7575 [1] 34998 [1] "Average Date / Time for slice RF04 = 2018-05-01 23:03:24.5044679641724" [1] "sum(lsel) = 2462" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 1.244 795.437 [1] 1.244 795.437 [1] 204.563 998.756 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 724.952" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF04 CO2_AO2 range = 404.94,414.33" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"