[1] "2025-05-13 16:55:28 MDT" options [1,] "file" "180427a" [2,] "flight" "RF02" [3,] "project" "ATOM4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "7" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "TRUE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "180427a" [1] "Reading in flight and plotting intervals" Read 23 records [1] "Reading in /scr/raf/stephens/AO2DAT/180427a.mr" Read 18106 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.36 seconds" [1] "New JOGEST = 2.36 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/180427a.hr" Read 72425 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 04:55:29 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 400.74 O2 = -586.5" [1] "position 2 cylinder OK30768 description: LS CO2 = 423.76 O2 = -828.9" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -581.7" [1] "position 4 cylinder OK30766 description: WT CO2 = 409.52 O2 = -897.3" [1] "position 5 cylinder OK30769 description: LP CO2 = 408.97 O2 = -883.9" [1] 400.7440 423.7580 393.4085 409.5158 408.9692 [1] -586.4651 -828.8703 -581.6767 -897.2740 -883.9422 [1] "Nominal linear calibrations:" [1] "co2scl = 0.863 co2off = 55.67 o2scla = -0.056 o2offa = -153.4" [1] "(dV/V)/(dXO2/XO2) = -3.725" [1] "(dV/V)/d(O2/N2) = -2.945" [1] "Reading in very high resolution timeseries" Read 362120 records [1] 362120 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:55:30 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:55:32 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -2.945" [1] "o2scaleavenew_drelVdrelP = -3.725" [1] "median(o2scalenew) = -2.96" [1] "Empirical dV/V vs dP/P relationship =-4.053, r^2 =0.282, damping =1.088" [1] "Tue May 13 04:55:32 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:56:31 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 5081247.790848 SECONDS" [1] "Tue May 13 04:56:31 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "Screening 1 LiH2O values less than -10" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -422.053 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 35.879 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 35.993 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -17.622 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 6 [1] 114 [1] 150 [1] 150 [1] 150 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 117.6215 275.297023 996753.5 1 [2,] 2 117.6216 -4.761467 996927.4 -1 [3,] 3 117.6216 -129.326901 997036.4 1 [4,] 70 117.6235 -16.689645 997714.8 -1 [5,] 71 117.6235 -384.243223 997750.0 1 [6,] 72 117.6236 -755.602368 996995.4 -1 [7,] 134 117.6252 -878.952841 997906.8 -1 [8,] 135 117.6253 -621.416524 998801.0 1 [9,] 136 117.6253 -314.603320 998534.0 -1 [10,] 138 117.6253 -41.342189 998805.8 -1 [11,] 200 117.6270 -143.569650 999412.6 -1 [12,] 201 117.6270 -472.928480 999577.8 1 [13,] 202 117.6270 -816.147651 998761.8 -1 [14,] 264 117.6287 -919.628292 999200.3 -1 [15,] 265 117.6287 -685.154591 1000129.9 1 [16,] 266 117.6287 -401.252880 999767.6 -1 [17,] 268 117.6288 -136.648415 1000022.1 -1 [18,] 392 117.6323 -107.592682 1000751.2 -1 [19,] 393 117.6323 -333.500110 1000858.3 1 [20,] 394 117.6323 -594.521371 1000227.6 -1 [21,] 396 117.6324 -832.935719 1000016.5 -1 [22,] 456 117.6340 -877.251132 999994.2 -1 [23,] 457 117.6340 -638.528881 1000874.1 1 [24,] 458 117.6341 -295.020390 1000603.0 -1 [25,] 642 117.6391 -51.250075 1001455.8 -1 [26,] 643 117.6391 -299.479448 1001512.9 1 [27,] 644 117.6391 -597.671631 1000895.0 -1 [28,] 706 117.6408 -877.510219 1001243.9 -1 [29,] 707 117.6409 -654.388479 1002134.3 1 [30,] 708 117.6409 -374.252997 1001798.5 -1 [31,] 710 117.6409 -129.037062 1002042.2 -1 [32,] 1024 117.6495 -102.563882 1007386.1 -1 [33,] 1025 117.6495 -333.540577 1007507.4 1 [34,] 1026 117.6495 -610.724069 1006879.9 -1 [35,] 1150 117.6529 -906.782295 1008694.0 -1 [36,] 1151 117.6529 -634.478649 1009629.4 1 [37,] 1152 117.6530 -340.935211 1009322.3 -1 [38,] 1154 117.6530 -105.344379 1009579.9 -1 [39,] 1282 117.6565 -132.278340 1012384.0 -1 [40,] 1283 117.6565 -467.006626 1012557.3 1 [41,] 1284 117.6565 -796.469521 1011769.6 -1 [42,] 1346 117.6582 -821.399378 1013373.8 -1 [43,] 1347 117.6582 -499.185993 1014222.3 1 [44,] 1348 117.6583 -172.941392 1014086.8 -1 [45,] 2552 117.6911 -555.374051 995427.5 -1 [46,] 2558 117.6913 -94.492126 995668.6 -1 [47,] 2620 117.6930 -182.996396 993374.9 -1 [48,] 2621 117.6930 -500.874302 993530.6 1 [49,] 2622 117.6930 -801.094794 992688.9 -1 [50,] 3912 117.7282 -592.005784 970119.1 -1 [51,] 3918 117.7284 -869.092832 969870.4 -1 [52,] 3980 117.7300 -826.225856 970075.9 -1 [53,] 3981 117.7301 -442.765802 970863.7 1 [54,] 3982 117.7301 -138.756021 970733.5 -1 [55,] 4044 117.7318 -210.415311 970619.2 -1 [56,] 4045 117.7318 -549.831101 970834.8 1 [57,] 4046 117.7318 -863.272836 969985.9 -1 [58,] 4108 117.7335 -805.031695 969893.6 -1 [59,] 4109 117.7335 -390.990863 970657.8 1 [60,] 4110 117.7336 -70.470029 970597.1 -1 [61,] 5376 117.7682 -559.058586 966914.6 -1 [62,] 5382 117.7683 -202.693289 967356.4 -1 [63,] 5444 117.7700 -125.666666 968277.3 -1 [64,] 5445 117.7701 -400.837991 968413.5 1 [65,] 5446 117.7701 -692.432440 967723.9 -1 [66,] 6442 117.7972 -655.140970 966920.9 -1 [67,] 6510 117.7991 -932.075453 966242.7 -1 [68,] 6511 117.7991 -658.760781 967138.0 1 [69,] 6512 117.7991 -348.074577 966820.0 -1 [70,] 7458 117.8249 -576.760493 968155.6 -1 [71,] 7464 117.8250 -144.118918 968683.3 -1 [72,] 7526 117.8267 -520.749093 969528.3 -1 [73,] 7528 117.8268 -855.254157 969278.4 -1 [74,] 8498 117.8533 -528.880596 985752.9 -1 [75,] 8504 117.8534 -779.428330 985485.7 -1 [76,] 8566 117.8551 -912.370671 985294.5 -1 [77,] 8567 117.8552 -626.281346 986195.2 1 [78,] 8568 117.8552 -304.017921 985909.8 -1 [79,] 8630 117.8569 -136.189766 985908.5 -1 [80,] 8631 117.8569 -420.845174 986035.7 1 [81,] 8632 117.8569 -739.566347 985288.9 -1 [82,] 9998 117.8942 -740.466157 995377.8 -1 [83,] 10066 117.8961 -771.943720 995144.3 -1 [84,] 10067 117.8961 -448.182253 995891.1 1 [85,] 10068 117.8961 -146.221243 995748.3 -1 [86,] 11274 117.9290 -787.877125 1009665.4 -1 [87,] 11278 117.9291 -778.193394 1009692.7 -1 [88,] 11279 117.9291 -531.623400 1010487.0 1 [89,] 11280 117.9291 -263.503137 1010250.0 -1 [90,] 11342 117.9308 -269.083426 1010499.5 -1 [91,] 11343 117.9308 -558.910647 1010798.5 1 [92,] 11344 117.9309 -826.244699 1009957.2 -1 [93,] 12356 117.9586 -777.040020 1007200.4 -1 [94,] 12424 117.9604 -651.862982 1007397.2 -1 [95,] 12426 117.9605 -149.358176 1007880.1 -1 [96,] 12486 117.9621 -122.759339 1007961.1 -1 [97,] 12487 117.9621 -424.345174 1008088.7 1 [98,] 12488 117.9622 -746.982784 1007306.6 -1 [99,] 12550 117.9638 -618.235685 1007556.6 -1 [100,] 12551 117.9639 -305.137649 1008156.9 1 [101,] 12552 117.9639 -50.678609 1008114.2 -1 [102,] 12612 117.9655 24.681149 1008426.4 -1 [103,] 12613 117.9655 -257.091571 1008406.5 1 [104,] 12614 117.9656 -556.780424 1007828.1 -1 [105,] 13682 117.9947 -547.250426 1001172.8 -1 [106,] 13688 117.9948 -252.385969 1001500.0 -1 [107,] 13750 117.9965 -176.144951 1001574.7 -1 [108,] 13751 117.9966 -498.190330 1001757.1 1 [109,] 13752 117.9966 -817.105483 1000925.7 -1 [110,] 15266 118.0378 -492.374745 1010366.0 -1 [111,] 15272 118.0380 -753.098409 1010127.3 -1 [112,] 15334 118.0397 -898.606180 1010474.4 -1 [113,] 15335 118.0397 -571.312048 1011391.5 1 [114,] 15336 118.0397 -227.803645 1011187.4 -1 [115,] 15462 118.0432 20.082342 1011459.1 -1 [116,] 15463 118.0432 -270.606442 1011429.4 1 [117,] 15464 118.0432 -561.364204 1010840.9 -1 [118,] 16222 118.0639 -785.853963 1013415.0 -1 [119,] 16226 118.0640 -730.960109 1013538.3 -1 [120,] 16227 118.0640 -449.666454 1014280.3 1 [121,] 16228 118.0640 -166.111284 1014125.1 -1 [122,] 16290 118.0657 -298.987375 1014655.8 -1 [123,] 16291 118.0657 -585.795093 1014999.7 1 [124,] 16292 118.0658 -844.415463 1014149.2 -1 [125,] 17527 118.0994 -501.767879 1014036.1 1 [126,] 17528 118.0995 -571.491203 1013586.8 -1 [127,] 17529 118.0995 -526.208800 1014302.5 1 [128,] 17530 118.0995 -439.594919 1013930.3 -1 [129,] 17558 118.1003 -597.746164 1014329.9 -1 [130,] 17559 118.1003 -992.869034 1014978.8 1 [131,] 17560 118.1003 -1418.092092 1013538.5 -1 [132,] 17564 118.1004 -1276.586743 1013819.3 -1 [133,] 17566 118.1005 -838.511670 1014313.8 -1 [134,] 17568 118.1005 -544.089859 1014666.5 -1 [135,] 17570 118.1006 -292.650229 1014975.9 -1 [136,] 17572 118.1006 -112.822477 1015222.6 -1 [137,] 17858 118.1084 -79.380477 1023865.2 -1 [138,] 17859 118.1084 -441.501659 1023999.9 1 [139,] 17860 118.1085 -785.691686 1023218.4 -1 [140,] 17920 118.1101 -890.503198 1024947.1 -1 [141,] 17921 118.1101 -693.541644 1025889.7 1 [142,] 17922 118.1101 -436.555092 1025501.8 -1 [143,] 17924 118.1102 -133.960579 1025848.1 -1 [144,] 17984 118.1118 -184.322121 1027117.7 -1 [145,] 17985 118.1119 -500.328994 1027327.2 1 [146,] 17986 118.1119 -828.877870 1026474.8 -1 [147,] 18046 118.1135 -932.332352 1025432.5 -1 [148,] 18047 118.1135 -703.798998 1026355.9 1 [149,] 18048 118.1136 -399.225872 1025938.1 -1 [150,] 18050 118.1136 -32.322784 1026215.1 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 624 117.6386 1.013100e+08 [2,] 2036 117.6770 1.054139e+04 [3,] 9618 117.8839 1.355815e+03 [4,] 12852 117.9720 1.070274e+04 [5,] 15108 118.0335 1.051239e+05 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 93.683 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -28.035 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -28.1 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -17.622 PER MEG" [1] 400.7440 423.7580 393.4085 409.5158 408.9692 [1] -586.4651 -828.8703 -581.6767 -897.2740 -883.9422 [1] "Nominal linear calibrations:" [1] "co2scl = 0.863 co2off = 55.67 o2scla = -0.056 o2offa = -153.3" [1] "(dV/V)/(dXO2/XO2) = -3.732" [1] "(dV/V)/d(O2/N2) = -2.951" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.4 minutes" [1] "Shortest Cal: 0 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 3 calibration period(s) with less than 30 seconds of data" [1] "at: 18" [1] "at: 23" [1] "at: 64" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-1HZ_DC8_20180427_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 669060 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-20Hz_DC8_20180427_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 19345144 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00198" [1] "HS CO2 vs. PACAB: m = -0.00154, r^2 = 0.18" [1] "LS CO2 vs. PACAB: m = -0.00242, r^2 = 0.36" [1] "HS+LS LIH2O vs. PACAB: m = -1.75e-05" [1] "HS LIH2O vs. PACAB: m = -1.33e-05, r^2 = 0.12" [1] "LS LIH2O vs. PACAB: m = -2.18e-05, r^2 = 0.31" [1] "HS+LS CO2 vs. LIH2O: m = 43.8" [1] "HS CO2 vs. LIH2O: m = 47, r^2 = 0.28" [1] "LS CO2 vs. LIH2O: m = 40.6, r^2 = 0.13" [1] "APCO2 vs. PACAB: m = -0.0279, r^2 = 0.31" [1] "Correcting for PCAB effect on LI840 using average of HS and LS fits = -0.00198" [1] "HS+LS CO2 vs. PACAB postcorr: m = -0.000109" [1] "HS CO2 vs. PACAB postcorr: m = 0.000324, r^2 = 0.01" [1] "LS CO2 vs. PACAB postcorr: m = -0.000542, r^2 = 0.03" [1] "HS+LS LIH2O vs. PACAB postcorr: m = 4.24e-21" [1] "HS LIH2O vs. PACAB postcorr: m = 4.27e-06, r^2 = 0.01" [1] "LS LIH2O vs. PACAB postcorr: m = -4.27e-06, r^2 = 0.02" [1] "HS+LS CO2 vs. LIH2O postcorr: m = 23.9" [1] "HS CO2 vs. LIH2O postcorr: m = 47.7, r^2 = 0.34" [1] "LS CO2 vs. LIH2O postcorr: m = 0.0359, r^2 = 0" [1] "APCO2 vs. PACAB postcorr: m = -0.028, r^2 = 0.29" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0255" [1] "HS O2 vs. PACAB: m = 0.0257, r^2 = 0.12" [1] "LS O2 vs. PACAB: m = 0.0254, r^2 = 0.08" [1] "HS+LS O2 vs. LIH2O: m = -157" [1] "HS O2 vs. LIH2O: m = -182, r^2 = 0.01" [1] "LS O2 vs. LIH2O: m = -131, r^2 = 0" [1] "HS+LS O2 vs. PAO2: m = -9.75" [1] "HS O2 vs. PAO2: m = -11.4, r^2 = 0.63" [1] "LS O2 vs. PAO2: m = -8.08, r^2 = 0.28" [1] "HS+LS O2 vs. TPBOX: m = 2.69" [1] "HS O2 vs. TPBOX: m = 3.3, r^2 = 0.59" [1] "LS O2 vs. TPBOX: m = 2.08, r^2 = 0.17" [1] "APO vs. PACAB: m = 0.367, r^2 = 0.29" [1] "APO vs. PAO2: m = -19.7, r^2 = 0.19" [1] "APO vs. TPBOX: m = 8.45, r^2 = 0.23" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.346, r^2 = 0.2" [1] "LS CO2 vs. LiCor Cell P: m = 0.318, r^2 = 0.23" [1] "HS CO2 vs. CO2 Vol P: m = 0.704, r^2 = 0.57" [1] "LS CO2 vs. CO2 Vol P: m = 0.664, r^2 = 0.81" [1] "HS CO2 vs. SLOPE: m = 0.0917, r^2 = 0" [1] "LS CO2 vs. SLOPE: m = 0.117, r^2 = 0.01" [1] "HS O2 vs. O2 Vol P: m = -9.65, r^2 = 0.41" [1] "LS O2 vs. O2 Vol P: m = -4.62, r^2 = 0.01" [1] "HS O2 vs. O2 Cell T: m = 4.56, r^2 = 0.37" [1] "LS O2 vs. O2 Cell T: m = 3.03, r^2 = 0.02" [1] "HS O2 vs. CO2 Vol P: m = -7.78, r^2 = 0.18" [1] "LS O2 vs. CO2 Vol P: m = -8.14, r^2 = 0.02" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -0.448, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 0.0424, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -7.78, r^2 = 0.18" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -8.14, r^2 = 0.02" [1] "HS O2 vs. LIH2O: m = -191, r^2 = 0.01" [1] "LS O2 vs. LIH2O: m = 3180, r^2 = 0.24" [1] "HS O2 vs. SLOPE: m = -0.487, r^2 = 0.15" [1] "LS O2 vs. SLOPE: m = -1.18, r^2 = 0.87" [1] "HS CO2 vs. Time: m = 14.413, r^2 = 0.81" [1] "LS CO2 vs. Time: m = 14.475, r^2 = 0.8" [1] "HS CO2 vs. Cylinder T: m = 1.252, r^2 = 0.14" [1] "LS CO2 vs. Cylinder T: m = 1.878, r^2 = 0.45" [1] "HS CO2 vs. Regulator T: m = -0.174, r^2 = 0.08" [1] "LS CO2 vs. Regulator T: m = -0.142, r^2 = 0.073" [1] "HS CO2 vs. Ref. Volumes T: m = 0.114, r^2 = 0.03" [1] "LS CO2 vs. Ref. Volumes T: m = 0.154, r^2 = 0.073" [1] "HS CO2 vs. Manifold T: m = -0.141, r^2 = 0.19" [1] "LS CO2 vs. Manifold T: m = -0.133, r^2 = 0.27" [1] "HS CO2 vs. Pump Box T: m = -0.099, r^2 = 0.18" [1] "LS CO2 vs. Pump Box T: m = -0.12, r^2 = 0.385" [1] "HS O2 vs. Cylinder T: m = -16.569, r^2 = 0.06" [1] "LS O2 vs. Cylinder T: m = -4.462, r^2 = 0" [1] "HS O2 vs. Regulator T: m = 5.733, r^2 = 0.22" [1] "LS O2 vs. Regulator T: m = 3.343, r^2 = 0.008" [1] "HS O2 vs. Ref. Volumes T: m = 4.53, r^2 = 0.12" [1] "LS O2 vs. Ref. Volumes T: m = 2.465, r^2 = 0.004" [1] "HS O2 vs. Manifold T: m = 4.388, r^2 = 0.47" [1] "LS O2 vs. Manifold T: m = 2.829, r^2 = 0.024" [1] "HS O2 vs. Pump Box T: m = 2.837, r^2 = 0.38" [1] "LS O2 vs. Pump Box T: m = 2.011, r^2 = 0.021" [1] "HS CO2 vs. WT P: m = 0, r^2 = 0.01" [1] "LS CO2 vs. WT P: m = 0, r^2 = 0.018" [1] "HS CO2 vs. SP P: m = 0.000314, r^2 = 0.01" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.09, r^2 = 0.14" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.09, r^2 = 0.14" [1] "LS CO2 vs. SP P: m = -0.000428, r^2 = 0.03" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.009, r^2 = 0.07" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.008, r^2 = 0.07" [1] "HS CO2 vs. WT FL: m = -0.052, r^2 = 0.04" [1] "LS CO2 vs. WT FL: m = -0.051, r^2 = 0.069" [1] "HS CO2 vs. SP FL: m = -0.015, r^2 = 0.02" [1] "LS CO2 vs. SP FL: m = 0.011, r^2 = 0.012" [1] "HS O2 vs. SLPDIFF: m = 0.878, r^2 = 0.14" [1] "LS O2 vs. SLPDIFF: m = 1.557, r^2 = 0.05" [1] "HS O2 vs. WT P: m = 0.022, r^2 = 0.08" [1] "LS O2 vs. WT P: m = 0.023, r^2 = 0.009" [1] "HS O2 vs. SP P: m = 0.022, r^2 = 0.08" [1] "LS O2 vs. SP P: m = 0.02, r^2 = 0.007" [1] "HS O2 vs. WT FL: m = 2.856, r^2 = 0.31" [1] "LS O2 vs. WT FL: m = 1.622, r^2 = 0.013" [1] "HS O2 vs. SP FL: m = -0.267, r^2 = 0.01" [1] "LS O2 vs. SP FL: m = -0.296, r^2 = 0.002" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 48.74, 74.08" [1] "Empirical LP O2 lag flow(s): 107.1, 100.4" [1] "Empirical LP CO2 lag time(s): 39.41, 67.17" [1] "Empirical LP CO2 lag flow(s): 107.1, 100.4" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.43" [1] "Median all HS CO2 SD = 0.44" [1] "Median all LS CO2 SD = 0.43" [1] "Median all LT CO2 SD = 0.41" [1] "Median all WT CO2 SD = 0.41" [1] "Median all HS or LS CO2 SD = 0.43" [1] "Median all cal O2 SD = 1.66" [1] "Median all HS O2 SD = 1.57" [1] "Median all LS O2 SD = 2.18" [1] "Median all LT O2 SD = 1.59" [1] "Median all WT O2 SD = 1.27" [1] "Median all HS or LS O2 SD = 1.82" [1] "Median all cal CO2 Slope = 0.03" [1] "Median all HS CO2 Slope = 0.01" [1] "Median all LS CO2 Slope = 0.09" [1] "Median all LT CO2 Slope = 0.15" [1] "Median all WT CO2 Slope = -0.06" [1] "Median all HS or LS CO2 Slope = 0.03" [1] "Median all cal O2 Slope = 1.04" [1] "Median all HS O2 Slope = 0.97" [1] "Median all LS O2 Slope = 2.9" [1] "Median all LT O2 Slope = -0.7" [1] "Median all WT O2 Slope = -0.11" [1] "Median all HS or LS O2 Slope = 1.43" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 5.35 per meg" [1] "Initial O2 Calibration Offset = 0.58 per meg" [1] "SD of O2 Calibration (post-takeoff) = 3.85 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 0 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -8.49 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 53701.83 96346.97" [1] "Time lag adjustments = 7 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 50.6 at 104.1 sccm" [1] "Median O2 delay + tlagff = 51.3 at 104.1 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 49.2 at 104.1 sccm" [1] "Median O2 delay from 3-way + tlagff = 50 at 104.1 sccm" [1] "after calc and ff lag: 53647.72 96291.3" [1] "2025-05-13 16:57:36 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 2.386732975 12.077308755 8.929240758 3.901113293 0.524132932 [6] 0.258197711 3.379165586 5.870869121 7.447668616 13.393616991 [11] 13.393616991 12.746285481 4.680777628 0.600539419 0.600539419 [16] 1.132790228 1.132790228 1.132790228 1.132790228 -0.576920928 [21] 6.027234995 6.027234995 6.027234995 12.576807168 14.703630509 [26] 14.702841854 14.440379662 9.987413880 4.409704725 4.409704725 [31] 3.988294962 3.988294962 14.206788675 16.587317945 16.587317945 [36] 15.624758344 3.338709831 3.338709831 3.325726569 3.203234714 [41] 8.575035890 8.575035890 8.937576477 9.521600847 11.702753041 [46] 16.319659831 16.319659831 15.695605791 13.939407028 12.747580518 [51] 13.185966577 13.508016246 13.508016246 -0.069008976 -1.214573599 [56] -1.386521158 -1.386521158 -1.638005347 -1.638005347 -0.310321689 [61] 1.663350248 1.494429072 1.494429072 1.476182377 1.386027380 [66] 0.788581149 -1.319621892 -6.387369216 -1.789614961 7.200914832 [71] 19.648158923 16.194481764 16.145953121 14.955408218 4.115380146 [76] 4.115380146 5.490355160 9.934670546 2.882079211 2.882079211 [81] 2.882079211 2.882079211 11.524343460 11.726191482 11.726191482 [86] 11.726191482 9.120844325 -0.075809254 -1.528648792 -4.079052670 [91] -4.079052670 -1.452172229 -1.452172229 -1.452172229 -1.452172229 [96] -5.883284707 -5.883284707 -5.883284707 -7.958070191 -5.756107670 [101] 5.465882346 5.465882346 5.465882346 5.465882346 -3.991820483 [106] -1.525932391 -0.003882821 0.350280862 2.779774176 2.779774176 [111] 2.779774176 2.779774176 -8.871298453 -8.871298453 -8.879590709 [116] -9.977004447 -6.977866132 -4.393525608 -10.603499753 -10.603499753 [121] -6.698493187 10.339841690 11.143596375 11.143596375 0.605355011 [126] -7.675248944 -7.675248944 -8.202173288 -8.214194320 -10.615202111 [131] -10.604726250 -10.568245328 -10.544578258 4.102861841 4.091618527 [136] 2.684519803 0.578136431 -0.956411210 -8.964719125 -7.562973399 [141] -5.343866698 -5.343866698 -7.055887502 -7.055887502 -7.055887502 [146] -7.055887502 -13.441401894 -13.441401894 -13.441401894 -13.441401894 [151] -8.603226200 -8.603226200 -8.603226200 -8.603226200 -8.945481536 [156] -9.718686849 -9.718686849 -9.718686849 -8.470934444 2.025838753 [161] 1.575504839 1.379376784 1.681948967 -3.019410350 -3.019410350 [166] -3.019410350 -3.019410350 1.377637825 1.479444005 1.392277531 [171] 1.493081024 1.417615616 0.686984134 0.686984134 0.490716139 [176] -0.009749139 -6.940891316 -7.161989854 -6.950397243 -6.395613524 [181] -15.003648225 -14.897247256 -14.897247256 -14.952453834 -6.900877381 [186] -7.066160723 -7.107895035 -7.201007981 -4.428442805 4.629884267 [191] 4.034336580 4.034336580 4.034336580 -1.942368546 -0.257973363 [196] -0.257973363 -1.349203815 -19.614039084 -19.614039084 -25.107530733 [201] -25.107530733 -13.940991349 NA NA NA [206] NA -11.046936203 -13.848047440 -13.848047440 -10.129003230 [211] 5.557054712 5.557054712 5.656515640 7.649084010 1.020688379 [216] 1.020688379 1.020688379 1.020688379 -10.011766986 -10.923390719 [221] -10.923390719 -10.923390719 -7.544973707 -0.601810149 -6.293526458 [226] -6.293526458 -6.293526458 5.935405025 5.935405025 5.595711844 [231] 5.334352623 -12.929777194 -12.929777194 -12.930887141 -12.935473473 [236] -7.830286492 -7.830286492 -7.773783386 -6.733571373 -10.128929473 [241] -17.889046677 -17.889046677 -28.092739167 -28.092739167 -18.738991252 [246] -13.532062990 -13.280644327 -13.280644327 -10.004181158 0.504494635 [251] 1.741383145 1.741383145 2.576343030 -3.404735173 -4.938452505 [256] -4.938452505 -4.938452505 -9.256692854 -10.029654118 -10.618471666 [261] -10.618471666 -9.623985259 -7.951702552 -1.943823311 -1.943823311 [266] -6.705369421 -8.240933049 -12.660008456 -15.953544099 -18.491243378 [271] -20.036868261 -13.939883542 -13.001183871 -13.001183871 -10.275003270 [276] -13.071633810 -13.071633810 -13.071633810 -10.935275880 -11.402966565 [281] -11.402966565 -11.402966565 -14.668298165 -16.225756255 -15.928461715 [286] -15.492802867 -7.792575447 -2.675576052 -2.675576052 -2.675576052 [291] -3.165361965 1.952177532 1.404598114 1.404598114 1.404598114 [296] -18.194520537 -16.004796255 -8.920515934 -8.880452191 -4.824141675 [301] -3.985598235 -3.985598235 -4.924459208 -4.694816792 -1.254059647 [306] -1.881822056 -1.881822056 -1.881822056 -8.659644646 -8.659644646 [311] -8.251827512 -6.966034731 -7.596826444 -7.596826444 -7.596826444 [316] -7.596826444 3.028137491 3.028137491 -1.021522634 -2.233847522 [321] -6.426233681 -10.623461457 -7.656370278 -2.825976300 -2.825976300 [326] -1.945592479 -4.987906178 -9.886198262 -10.277168483 -16.642629063 [331] -16.642629063 -20.134351041 -21.474979550 -14.975072592 -13.539086921 [336] 1.043373609 1.043373609 -4.174811854 -10.306689882 -14.760207566 [341] -14.855692019 -15.369068115 -21.613714831 -21.980795679 -22.032651594 [346] -22.032651594 -9.268948729 -3.018223192 -2.723016969 -2.723016969 [351] 1.698080984 1.698080984 1.222130554 0.770054959 -14.757753872 [356] -16.468257874 -16.468257874 -16.468257874 -3.254525834 12.947639934 [361] 13.549719470 13.901799016 13.982078605 1.358140603 1.422508489 [366] 1.427941186 1.427941186 0.434549269 0.434549269 0.434549269 [371] 0.434549269 -10.913654592 -10.991055762 -11.241763261 -11.824242926 [376] 1.550623567 1.806730811 1.806730811 1.806730811 2.493179069 [381] 2.688721373 2.688721373 2.688721373 1.417749813 -14.334321717 [386] -17.302953756 -17.302953756 -17.302953756 -9.158963521 -9.158963521 [391] -9.158963521 -9.158963521 -15.265042002 -13.067901352 -10.457934441 [396] -8.056275998 -15.241885760 -18.135580850 -18.008528040 [1] 150.8414 153.6453 156.3739 159.4181 162.3743 166.3789 169.5077 172.6068 [9] 175.1709 178.1214 180.2258 182.1133 183.5491 184.9118 185.8088 186.7959 [17] 187.5552 188.3990 189.1064 190.4633 191.8159 193.4790 195.4023 198.1337 [25] 200.4500 202.8547 204.9751 207.6269 209.9866 212.3205 214.7297 217.0235 [33] 219.6356 222.0413 224.3998 226.7850 229.1760 231.7289 233.8321 236.0228 [41] 238.1670 240.4696 242.3944 245.3224 247.8966 250.6018 253.4540 256.0144 [49] 258.8224 261.4078 263.8340 265.9175 267.9013 269.4956 271.0431 272.2752 [57] 273.5776 274.6743 275.6361 276.6906 277.8049 279.3812 281.0349 283.1539 [65] 285.5114 288.1798 290.6472 293.8620 297.3801 300.5444 303.5299 306.3109 [73] 308.8202 310.8476 313.1812 315.1347 316.8573 318.2167 319.1690 319.5155 [81] 319.5787 319.4100 319.4295 319.6423 319.9318 320.3039 321.0461 322.0271 [89] 323.2157 324.2454 325.1843 325.7030 325.9763 326.1450 326.5390 327.1725 [97] 327.9362 328.9431 330.0294 331.1504 332.6103 333.8051 335.0550 336.0669 [105] 336.7639 337.5255 337.9955 338.5663 339.1012 339.4698 339.7099 340.0332 [113] 340.4617 341.3654 342.5224 344.1700 345.9958 348.1420 350.3181 352.6169 [121] 355.2373 357.4912 359.8485 361.9802 364.0279 366.0675 367.9073 369.5342 [129] 371.2172 372.8038 374.2194 375.5756 377.0917 378.8693 380.3797 381.7027 [137] 383.3910 384.6281 386.2325 387.6369 388.9219 389.9674 391.0185 391.5887 [145] 391.9434 392.0088 392.0736 392.1103 392.2225 392.2700 392.2498 392.2068 [153] 392.1520 391.9935 391.7801 391.5666 391.5810 391.8718 392.3676 392.8082 [161] 393.0976 393.2193 393.0315 392.7286 392.4880 392.4088 392.5629 392.7768 [169] 392.9385 392.9925 392.9300 392.7822 392.6308 392.6843 392.9399 393.2505 [177] 393.5952 393.7324 393.6011 393.2569 392.8842 392.6900 392.7362 392.8524 [185] 392.9208 393.0234 393.0492 393.1070 393.2761 393.7298 394.6640 395.9334 [193] 397.3997 399.1096 401.1718 403.2907 405.6053 408.0032 410.5666 413.2724 [201] 416.2411 419.0998 421.8980 424.7123 427.4864 430.1446 432.8630 435.2993 [209] 437.6199 440.1983 442.0633 443.6077 444.9688 446.0811 446.9885 447.6872 [217] 448.2795 448.7869 449.1231 449.5066 449.8037 450.2341 450.9328 451.4718 [225] 452.2704 453.0464 453.9771 454.9692 455.9639 457.0876 458.1082 459.2344 [233] 460.4046 461.6320 462.8453 464.3906 465.5603 466.8617 468.2597 469.6220 [241] 470.9351 472.3929 473.8714 475.3973 477.0248 478.6320 480.2018 481.8506 [249] 483.3561 484.8330 486.3065 487.6502 488.8382 490.0731 491.0676 492.0211 [257] 493.0044 493.9261 494.8061 495.9080 496.7464 498.1130 499.3804 500.5346 [265] 501.8070 503.0968 504.4126 505.6242 507.1430 508.5240 510.1072 511.3795 [273] 512.9746 514.3576 515.6903 516.8615 518.1940 519.3884 520.5403 521.7545 [281] 522.7157 523.6680 524.4540 525.3940 526.1766 526.9470 527.8636 528.6405 [289] 529.4030 530.2181 530.9894 531.8567 532.6327 533.3866 534.2052 534.9871 [297] 535.8473 536.7561 537.5083 538.3069 539.1174 539.9280 540.7301 541.5491 [305] 542.2284 542.9740 543.8233 544.5096 545.1601 545.7428 546.2503 546.7045 [313] 547.3545 547.8454 548.4486 549.2327 549.9906 550.8044 551.7725 552.7789 [321] 553.7849 554.9384 556.0463 557.2085 558.2578 559.4264 560.3849 561.5907 [329] 562.7270 563.7144 564.9449 566.1483 567.3838 568.6340 569.7765 570.9654 [337] 572.2361 573.5490 574.5668 575.8049 576.8971 577.9222 579.2253 580.4486 [345] 581.4859 582.7185 583.8026 584.8653 585.9147 586.8026 587.5466 588.1107 [353] 588.7330 589.3377 589.9242 590.6201 591.3081 592.0050 592.5011 592.8971 [361] 593.2256 593.5243 593.8024 594.2409 594.4639 594.6566 594.8126 594.9793 [369] 595.1792 595.5270 595.9639 596.4707 597.0177 597.6759 598.3548 599.1240 [377] 599.8387 600.6966 601.6199 602.5124 603.4714 604.4270 605.2668 606.1772 [385] 606.8973 607.4375 608.0870 608.6424 609.1598 609.5544 609.8416 610.0384 [393] 610.2897 610.5715 610.9064 611.2145 611.6704 612.1618 612.8536 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 110 O2 values from manual exclude period 118.0597 to 118.0627" [1] "Not reporting 110 APO values from manual exclude period 118.0597 to 118.0627" [1] "Not reporting 260 smoothed O2 values from manual exclude period 118.059128302569 to 118.062138158784" [1] "Not reporting 260 smoothed APO values from manual exclude period 118.059128302569 to 118.062138158784" [1] "Not reporting 260 smoothed O2 values from manual exclude period 118.059128302569 to 118.062138158784" [1] "Not reporting 260 smoothed APO values from manual exclude period 118.059128302569 to 118.062138158784" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1804/AO2_DC8_20180427_R6.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 148680 items [1] 2 3718 37170 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] -365.5911 -367.2060 -360.4190 -361.1360 -355.4650 -359.0650 [1] 34814 [1] "Average Date / Time for slice RF02 = 2018-04-27 21:10:51.3131976127625" [1] "sum(lsel) = 3046" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -4.506 803.250 [1] -4.506 803.250 [1] 196.750 1004.506 [1] 1.110223e-16 9.999990e+05 [1] "highestmid = 699.101" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF02 APO_AO2 range = -382.42,-342.61" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1804/AO2_DC8_20180427_R6.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 148680 items [1] 2 3718 37170 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] -713.9589 -708.0490 -698.7280 -696.3380 -691.0040 -693.9890 [1] 34825 [1] "Average Date / Time for slice RF02 = 2018-04-27 21:10:56.0597112178802" [1] "sum(lsel) = 3048" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -4.506 803.250 [1] -4.506 803.250 [1] 196.750 1004.506 [1] 1.110223e-16 9.999990e+05 [1] "highestmid = 699.101" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF02 O2_AO2 range = -739.56,-626.17" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1804/AO2_DC8_20180427_R6.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 148680 items [1] 2 3718 37170 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] 416.3167 414.8841 414.4018 413.8102 413.8745 413.7575 [1] 34991 [1] "Average Date / Time for slice RF02 = 2018-04-27 21:13:12.5536758899689" [1] "sum(lsel) = 3074" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -4.506 803.250 [1] -4.506 803.250 [1] 196.750 1004.506 [1] 1.110223e-16 9.999990e+05 [1] "highestmid = 699.101" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF02 CO2_AO2 range = 401.93,418.63" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"