[1] "2025-05-13 16:52:14 MDT" options [1,] "file" "180424a" [2,] "flight" "RF01" [3,] "project" "ATOM4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "7" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "TRUE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "180424a" [1] "Reading in flight and plotting intervals" Read 18 records [1] "Reading in /scr/raf/stephens/AO2DAT/180424a.mr" Read 16793 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.42 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.42 seconds" [1] "New JOGEST = 2.42 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/180424a.hr" Read 67181 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 16793 67180 [1] "Converting hrdata statout" [1] "Tue May 13 04:52:14 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 400.74 O2 = -586.6" [1] "position 2 cylinder OK30768 description: LS CO2 = 423.76 O2 = -828.8" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -581.7" [1] "position 4 cylinder OK30766 description: WT CO2 = 409.52 O2 = -897.7" [1] "position 5 cylinder OK30769 description: LP CO2 = 408.97 O2 = -884.3" [1] 400.7440 423.7576 393.4082 409.5151 408.9693 [1] -586.5510 -828.8361 -581.7328 -897.7055 -884.2689 [1] "Nominal linear calibrations:" [1] "co2scl = 0.875 co2off = 51.08 o2scla = -0.054 o2offa = -153.7" [1] "(dV/V)/(dXO2/XO2) = -3.851" [1] "(dV/V)/d(O2/N2) = -3.045" [1] "Reading in very high resolution timeseries" Read 335860 records [1] 335860 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:52:15 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:52:17 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.045" [1] "o2scaleavenew_drelVdrelP = -3.851" [1] "median(o2scalenew) = -3.05" [1] "Empirical dV/V vs dP/P relationship =-4.149, r^2 =0.182, damping =1.077" [1] "Tue May 13 04:52:17 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 2027 16201 $icochar [1] "0" "0" "24:15:38" "14:43:32" "114.614984" [6] "114.774131" "114.803512" "114.826364" "114.846768" "114.872068" [11] "114.890839" "114.915732" "114.935319" "114.972045" "114.853048" [16] "114.895633" "114.924963" "114.968113" $ecochar [1] "367" "14:43:32" "367" "24:15:38" "114.774131" [6] "114.806369" "114.826364" "114.852073" "114.872068" "114.894512" [11] "114.915732" "114.939400" "114.972045" "115.011628" "114.854176" [16] "114.896479" "114.925809" "114.968959" $flag [1] "all" "LP" "LP" "flight" [5] "a" "b" "c" "d" [9] "e" "f" "g" "h" [13] "i" "j" "donotreporto2" "donotreporto2" [17] "donotreporto2" "donotreporto2" $ico2 [1] 0.0000 0.0000 115.0109 114.6136 114.6150 114.7741 114.8035 114.8264 [9] 114.8468 114.8721 114.8908 114.9157 114.9353 114.9720 114.8530 114.8956 [17] 114.9250 114.9681 $eco2 [1] 367.0000 114.6136 367.0000 115.0109 114.7741 114.8064 114.8264 114.8521 [9] 114.8721 114.8945 114.9157 114.9394 114.9720 115.0116 114.8542 114.8965 [17] 114.9258 114.9690 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 2026 2026 114.6135 8.063285 -0.0010507 0.00427865 0.00427865 2026 2027 2027 114.6136 8.062836 -0.0014577 0.00418590 0.00418590 2027 2028 2028 114.6136 8.063208 -0.0012147 0.00424860 0.00424860 2028 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 2026 10.5 6.0 20.0 11710.5 1 8.065539 8.065090 2027 10.5 3.5 20.5 5865.5 -1 8.065217 8.064594 2028 10.5 1.0 21.0 20.5 1 8.065512 8.064994 vuvsigpdprcorr 2026 8.063263 2027 8.062807 2028 8.063180 [1] 0.6135334 0.6135607 0.6135887 [,1] [,2] [,3] [1,] 0.613544 1 6 [2,] 0.613554 -1 6 [3,] 0.613560 -1 6 [4,] 0.613566 -1 1 [5,] 0.613572 -1 1 [6,] 0.613582 1 1 [7,] 0.613588 1 1 [8,] 0.613594 1 1 [9,] 0.613600 1 1 [10,] 0.613610 -1 1 [11,] 0.613615 -1 1 [12,] 0.613621 -1 1 [13,] 0.613627 -1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 16200 16203 115.0108 7.979068 -0.00105935 0.01333360 0.01333360 16203 16201 16204 115.0109 7.978458 -0.00101590 0.01277950 0.01277950 16204 16202 16205 115.0109 7.979338 -0.00086070 0.01274645 0.01274645 16205 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 16200 10.5 1.00 64.00 19170.50 1 7.985188 7.984733 16201 10.5 2.25 64.25 14391.75 -1 7.984316 7.983880 16202 10.5 6.00 65.00 15.50 1 7.985124 7.984754 vuvsigpdprcorr 16200 7.978999 16201 7.978384 16202 7.979273 [1] 1.010823 1.010851 1.010879 [,1] [,2] [,3] [1,] 1.010778 1 1 [2,] 1.010788 -1 1 [3,] 1.010794 -1 1 [4,] 1.010801 -1 1 [5,] 1.010807 -1 1 [6,] 1.010817 1 1 [7,] 1.010823 1 1 [8,] 1.010828 1 1 [9,] 1.010834 1 1 [10,] 1.010845 -1 1 [11,] 1.010850 -1 1 [12,] 1.010856 -1 1 [13,] 1.010862 -1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 2027 16201 $icochar [1] "0" "0" "24:15:38" "14:43:32" "114.614984" [6] "114.774131" "114.803512" "114.826364" "114.846768" "114.872068" [11] "114.890839" "114.915732" "114.935319" "114.972045" "114.853048" [16] "114.895633" "114.924963" "114.968113" $ecochar [1] "367" "14:43:32" "367" "24:15:38" "114.774131" [6] "114.806369" "114.826364" "114.852073" "114.872068" "114.894512" [11] "114.915732" "114.939400" "114.972045" "115.011628" "114.854176" [16] "114.896479" "114.925809" "114.968959" $flag [1] "all" "LP" "LP" "flight" [5] "a" "b" "c" "d" [9] "e" "f" "g" "h" [13] "i" "j" "donotreporto2" "donotreporto2" [17] "donotreporto2" "donotreporto2" $ico2 [1] 0.0000 0.0000 115.0109 114.6136 114.6150 114.7741 114.8035 114.8264 [9] 114.8468 114.8721 114.8908 114.9157 114.9353 114.9720 114.8530 114.8956 [17] 114.9250 114.9681 $eco2 [1] 367.0000 114.6136 367.0000 115.0109 114.7741 114.8064 114.8264 114.8521 [9] 114.8721 114.8945 114.9157 114.9394 114.9720 115.0116 114.8542 114.8965 [17] 114.9258 114.9690 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 2026 2026 114.6135 8.063285 -0.0010507 0.00427865 0.00427865 2026 2027 2027 114.6136 8.062836 -0.0014577 0.00418590 0.00418590 2027 2028 2028 114.6136 8.063208 -0.0012147 0.00424860 0.00424860 2028 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 2026 10.5 6.0 20.0 11710.5 1 8.065539 8.065090 2027 10.5 3.5 20.5 5865.5 -1 8.065217 8.064594 2028 10.5 1.0 21.0 20.5 1 8.065512 8.064994 vuvsigpdprcorr 2026 8.063263 2027 8.062807 2028 8.063180 [1] 0.6135334 0.6135607 0.6135887 [,1] [,2] [,3] [1,] 0.613544 1 6 [2,] 0.613554 -1 6 [3,] 0.613560 -1 6 [4,] 0.613566 -1 1 [5,] 0.613572 -1 1 [6,] 0.613582 1 1 [7,] 0.613588 1 1 [8,] 0.613594 1 1 [9,] 0.613600 1 1 [10,] 0.613610 -1 1 [11,] 0.613615 -1 1 [12,] 0.613621 -1 1 [13,] 0.613627 -1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 16200 16203 115.0108 7.979068 -0.00105935 0.01333360 0.01333360 16203 16201 16204 115.0109 7.978458 -0.00101590 0.01277950 0.01277950 16204 16202 16205 115.0109 7.979338 -0.00086070 0.01274645 0.01274645 16205 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 16200 10.5 1.00 64.00 19170.50 1 7.985188 7.984733 16201 10.5 2.25 64.25 14391.75 -1 7.984316 7.983880 16202 10.5 6.00 65.00 15.50 1 7.985124 7.984754 vuvsigpdprcorr 16200 7.978999 16201 7.978384 16202 7.979273 [1] 1.010823 1.010851 1.010879 [,1] [,2] [,3] [1,] 1.010778 1 1 [2,] 1.010788 -1 1 [3,] 1.010794 -1 1 [4,] 1.010801 -1 1 [5,] 1.010807 -1 1 [6,] 1.010817 1 1 [7,] 1.010823 1 1 [8,] 1.010828 1 1 [9,] 1.010834 1 1 [10,] 1.010845 -1 1 [11,] 1.010850 -1 1 [12,] 1.010856 -1 1 [13,] 1.010862 -1 6 [1] "JOGAVES DOES NOT MATCH" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:53:09 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 7449764.535648 SECONDS" [1] "Tue May 13 04:53:09 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 4 medium-rate record(s) with accumulation errors" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 135.714 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -49.147 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -48.235 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 34.222 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 15 [1] 102 [1] 139 [1] 139 [1] 139 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 68 114.5589 18.84724 1007079.5 -1 [2,] 69 114.5589 -286.77095 1007040.1 1 [3,] 70 114.5589 -635.78807 1006341.6 -1 [4,] 72 114.5590 -873.52438 1006084.0 -1 [5,] 132 114.5607 -667.60111 1005133.2 -1 [6,] 133 114.5608 -262.15358 1005730.3 1 [7,] 134 114.5608 -27.50101 1005676.3 -1 [8,] 196 114.5626 -105.32638 1004315.3 -1 [9,] 197 114.5627 -384.10570 1004401.2 1 [10,] 198 114.5627 -708.74244 1003635.6 -1 [11,] 200 114.5628 -907.74751 1003415.3 -1 [12,] 260 114.5644 -960.09702 1002236.1 -1 [13,] 261 114.5644 -654.06169 1003180.2 1 [14,] 262 114.5644 -320.94100 1002869.9 -1 [15,] 384 114.5678 -122.44872 1001070.0 -1 [16,] 385 114.5678 -374.87868 1001176.4 1 [17,] 386 114.5679 -690.97183 1000443.1 -1 [18,] 388 114.5679 -889.49208 1000229.9 -1 [19,] 446 114.5695 -927.55695 999221.1 -1 [20,] 447 114.5696 -631.99430 1000134.9 1 [21,] 448 114.5696 -291.09184 999855.3 -1 [22,] 634 114.5748 -184.58782 997654.4 -1 [23,] 635 114.5748 -542.04165 997854.3 1 [24,] 636 114.5748 -858.64885 996975.7 -1 [25,] 696 114.5765 -812.62623 996514.2 -1 [26,] 697 114.5765 -495.93557 997303.1 1 [27,] 698 114.5765 -185.50171 997114.6 -1 [28,] 1008 114.5851 -218.68575 1000065.8 -1 [29,] 1009 114.5852 -543.05588 1000339.5 1 [30,] 1010 114.5852 -854.44701 999508.5 -1 [31,] 1132 114.5886 -781.84985 1003836.6 -1 [32,] 1133 114.5886 -427.23915 1004635.0 1 [33,] 1134 114.5886 -134.13072 1004548.1 -1 [34,] 1258 114.5921 -88.14192 1008767.9 -1 [35,] 1259 114.5921 -387.17145 1008884.3 1 [36,] 1260 114.5921 -713.25734 1008167.4 -1 [37,] 1320 114.5938 -911.87788 1009839.7 -1 [38,] 1321 114.5938 -655.40795 1010808.5 1 [39,] 1322 114.5938 -360.18952 1010506.1 -1 [40,] 1324 114.5939 -160.28665 1010755.7 -1 [41,] 2496 114.6267 -570.20952 1009297.6 -1 [42,] 2502 114.6269 -103.43783 1009646.4 -1 [43,] 2562 114.6286 -291.14776 1008015.2 -1 [44,] 2563 114.6286 -580.34028 1008309.4 1 [45,] 2564 114.6286 -839.49464 1007434.7 -1 [46,] 3738 114.6614 -616.62716 1000722.0 -1 [47,] 3744 114.6616 -856.57078 1000536.7 -1 [48,] 3804 114.6632 -915.22564 1000640.5 -1 [49,] 3805 114.6632 -609.72799 1001554.6 1 [50,] 3806 114.6633 -280.28986 1001299.5 -1 [51,] 3866 114.6649 -122.97351 1000741.2 -1 [52,] 3867 114.6649 -407.64597 1000843.5 1 [53,] 3868 114.6650 -795.65544 1000016.0 -1 [54,] 3928 114.6666 -948.05285 998546.9 -1 [55,] 3929 114.6667 -605.79651 999474.8 1 [56,] 3930 114.6667 -229.02006 999257.6 -1 [57,] 3990 114.6683 28.26046 997706.0 -1 [58,] 3991 114.6684 -225.07304 997659.1 1 [59,] 3992 114.6684 -481.28458 997133.9 -1 [60,] 4986 114.6961 -659.87020 972499.4 -1 [61,] 4992 114.6963 -139.77366 972936.1 -1 [62,] 5052 114.6980 -306.14155 971708.4 -1 [63,] 5053 114.6980 -607.89661 972010.9 1 [64,] 5054 114.6980 -878.43810 971142.8 -1 [65,] 6220 114.7308 -642.19042 973084.8 -1 [66,] 6226 114.7310 -866.15715 972881.1 -1 [67,] 6286 114.7326 -785.64528 973162.8 -1 [68,] 6287 114.7327 -455.49845 973912.2 1 [69,] 6288 114.7327 -149.22363 973770.5 -1 [70,] 7462 114.7656 -629.32787 988605.5 -1 [71,] 7468 114.7657 -141.08522 989236.2 -1 [72,] 7528 114.7674 -401.45186 990373.5 -1 [73,] 7530 114.7675 -893.14123 989957.7 -1 [74,] 8284 114.7887 -659.59916 1002370.0 -1 [75,] 8350 114.7905 -924.95163 1002850.8 -1 [76,] 8351 114.7905 -618.48098 1003790.8 1 [77,] 8352 114.7906 -278.51473 1003541.7 -1 [78,] 9532 114.8236 -651.79187 998575.4 -1 [79,] 9538 114.8237 -894.28760 998345.0 -1 [80,] 9598 114.8254 -936.64133 998485.6 -1 [81,] 9599 114.8254 -603.24884 999427.6 1 [82,] 9600 114.8255 -266.50858 999190.1 -1 [83,] 9722 114.8288 17.82822 999829.7 -1 [84,] 9723 114.8289 -264.04619 999818.8 1 [85,] 9724 114.8289 -538.89074 999262.9 -1 [86,] 11098 114.8676 -643.99289 1002252.4 -1 [87,] 11104 114.8678 -216.70027 1002792.3 -1 [88,] 11164 114.8695 -129.40396 1003728.1 -1 [89,] 11165 114.8695 -299.16415 1003873.7 1 [90,] 11166 114.8695 -620.20213 1003223.5 -1 [91,] 11168 114.8696 -891.65389 1003009.3 -1 [92,] 11317 114.8737 -630.39188 1005860.3 1 [93,] 11318 114.8738 -363.70164 1005630.9 1 [94,] 11319 114.8738 -492.82171 1005274.9 -1 [95,] 11320 114.8739 -643.07624 1005936.0 1 [96,] 12213 114.8990 -631.09446 1007301.8 -1 [97,] 12279 114.9009 -756.80898 1007858.5 -1 [98,] 12280 114.9009 -446.74272 1008604.0 1 [99,] 12281 114.9009 -170.52344 1008448.4 -1 [100,] 12341 114.9026 -263.99692 1008991.3 -1 [101,] 12342 114.9026 -588.17164 1009281.5 1 [102,] 12343 114.9027 -885.50416 1008388.3 -1 [103,] 12403 114.9044 -628.91098 1009328.4 -1 [104,] 12404 114.9044 -315.01434 1009942.8 1 [105,] 12405 114.9044 -55.75867 1009902.6 -1 [106,] 12486 114.9067 -649.44529 1010618.8 1 [107,] 12487 114.9067 -647.75487 1009870.7 -1 [108,] 12488 114.9068 -640.01889 1010416.7 1 [109,] 12489 114.9068 -634.89561 1009655.9 -1 [110,] 12490 114.9068 -641.29113 1010206.6 1 [111,] 13743 114.9420 -617.66107 1002957.2 -1 [112,] 13749 114.9422 -141.75666 1003365.6 -1 [113,] 13807 114.9438 -135.74518 1002706.1 -1 [114,] 13808 114.9438 -409.82192 1002832.0 1 [115,] 13809 114.9439 -741.40945 1002051.0 -1 [116,] 14578 114.9654 -688.85584 1003822.1 1 [117,] 14579 114.9655 -435.19267 1003559.7 1 [118,] 14580 114.9656 -575.48627 1003118.3 -1 [119,] 14581 114.9656 -675.16409 1003793.8 1 [120,] 14673 114.9682 -679.60096 1002966.1 1 [121,] 14674 114.9683 -493.05348 1002755.2 1 [122,] 14983 114.9768 -633.67148 997757.6 -1 [123,] 14989 114.9769 -921.64182 997366.9 -1 [124,] 15051 114.9787 -705.24059 996424.7 -1 [125,] 15053 114.9788 -154.71608 996904.6 -1 [126,] 15115 114.9805 -460.05865 995339.3 -1 [127,] 15117 114.9806 -926.64301 994863.7 -1 [128,] 15179 114.9823 -553.35184 994053.3 -1 [129,] 15181 114.9824 -46.94562 994487.0 -1 [130,] 16199 115.0109 -76.32904 1004023.1 -1 [131,] 16221 115.0115 -210.55696 1004409.0 -1 [132,] 16223 115.0116 -37.43167 1004662.2 -1 [133,] 16225 115.0116 95.32714 1004874.8 -1 [134,] 16603 115.0222 -250.68173 1016843.1 -1 [135,] 16604 115.0222 -568.17563 1017146.6 1 [136,] 16605 115.0222 -857.41251 1016299.5 -1 [137,] 16727 115.0256 -757.77133 1020763.9 -1 [138,] 16728 115.0256 -404.07327 1021548.0 1 [139,] 16729 115.0257 -68.13436 1021524.1 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 10603 114.8537 1.050596e+12 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 135.714 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -38.785 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -32.128 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 34.222 PER MEG" [1] 400.7440 423.7576 393.4082 409.5151 408.9693 [1] -586.5510 -828.8361 -581.7328 -897.7055 -884.2689 [1] "Nominal linear calibrations:" [1] "co2scl = 0.875 co2off = 51.08 o2scla = -0.054 o2offa = -153.6" [1] "(dV/V)/(dXO2/XO2) = -3.852" [1] "(dV/V)/d(O2/N2) = -3.045" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.4 minutes" [1] "Shortest Cal: 0.2 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 18" [1] "at: 66" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-1HZ_DC8_20180424_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 615654 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM4/MMS/MMS-20Hz_DC8_20180424_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 17802486 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00692" [1] "HS CO2 vs. PACAB: m = -0.00728, r^2 = 0.77" [1] "LS CO2 vs. PACAB: m = -0.00656, r^2 = 0.85" [1] "HS+LS LIH2O vs. PACAB: m = 9.63e-06" [1] "HS LIH2O vs. PACAB: m = -4.32e-05, r^2 = 0.46" [1] "LS LIH2O vs. PACAB: m = 6.24e-05, r^2 = 0.3" [1] "HS+LS CO2 vs. LIH2O: m = 26.4" [1] "HS CO2 vs. LIH2O: m = 83.8, r^2 = 0.68" [1] "LS CO2 vs. LIH2O: m = -31, r^2 = 0.22" [1] "APCO2 vs. PACAB: m = 0.00103, r^2 = 0" [1] "Correcting for PCAB effect on LI840 using average of HS and LS fits = -0.00692" [1] "HS+LS CO2 vs. PACAB postcorr: m = 1.02e-05" [1] "HS CO2 vs. PACAB postcorr: m = 0.00014, r^2 = 0" [1] "LS CO2 vs. PACAB postcorr: m = -0.000119, r^2 = 0" [1] "HS+LS LIH2O vs. PACAB postcorr: m = 3.39e-21" [1] "HS LIH2O vs. PACAB postcorr: m = -5.28e-05, r^2 = 0.56" [1] "LS LIH2O vs. PACAB postcorr: m = 5.28e-05, r^2 = 0.24" [1] "HS+LS CO2 vs. LIH2O postcorr: m = 14.4" [1] "HS CO2 vs. LIH2O postcorr: m = 25.7, r^2 = 0.2" [1] "LS CO2 vs. LIH2O postcorr: m = 3.11, r^2 = 0.02" [1] "APCO2 vs. PACAB postcorr: m = 0.00849, r^2 = 0.02" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0418" [1] "HS O2 vs. PACAB: m = 0.0397, r^2 = 0.1" [1] "LS O2 vs. PACAB: m = 0.0439, r^2 = 0.13" [1] "HS+LS O2 vs. LIH2O: m = -171" [1] "HS O2 vs. LIH2O: m = -675, r^2 = 0.19" [1] "LS O2 vs. LIH2O: m = 332, r^2 = 0.08" [1] "HS+LS O2 vs. PAO2: m = -9.07" [1] "HS O2 vs. PAO2: m = -8.46, r^2 = 0.51" [1] "LS O2 vs. PAO2: m = -9.67, r^2 = 0.61" [1] "HS+LS O2 vs. TPBOX: m = 2.27" [1] "HS O2 vs. TPBOX: m = 2.13, r^2 = 0.47" [1] "LS O2 vs. TPBOX: m = 2.41, r^2 = 0.38" [1] "APO vs. PACAB: m = -0.115, r^2 = 0.02" [1] "APO vs. PAO2: m = -24.6, r^2 = 0.26" [1] "APO vs. TPBOX: m = 11.1, r^2 = 0.31" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.319, r^2 = 0.17" [1] "LS CO2 vs. LiCor Cell P: m = 0.173, r^2 = 0.08" [1] "HS CO2 vs. CO2 Vol P: m = 0.343, r^2 = 0.4" [1] "LS CO2 vs. CO2 Vol P: m = 0.245, r^2 = 0.34" [1] "HS CO2 vs. SLOPE: m = 0.108, r^2 = 0.01" [1] "LS CO2 vs. SLOPE: m = -0.648, r^2 = 0.2" [1] "HS O2 vs. O2 Vol P: m = -9.61, r^2 = 0.5" [1] "LS O2 vs. O2 Vol P: m = -11, r^2 = 0.13" [1] "HS O2 vs. O2 Cell T: m = 4.95, r^2 = 0.44" [1] "LS O2 vs. O2 Cell T: m = 5.69, r^2 = 0.11" [1] "HS O2 vs. CO2 Vol P: m = -7.59, r^2 = 0.35" [1] "LS O2 vs. CO2 Vol P: m = -8.83, r^2 = 0.09" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 4.64, r^2 = 0.05" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 0.145, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -7.59, r^2 = 0.35" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -8.83, r^2 = 0.09" [1] "HS O2 vs. LIH2O: m = -478, r^2 = 0.08" [1] "LS O2 vs. LIH2O: m = 849, r^2 = 0.11" [1] "HS O2 vs. SLOPE: m = -0.703, r^2 = 0.18" [1] "LS O2 vs. SLOPE: m = -1.34, r^2 = 0.81" [1] "HS CO2 vs. Time: m = 16.567, r^2 = 0.91" [1] "LS CO2 vs. Time: m = 16.732, r^2 = 0.91" [1] "HS CO2 vs. Cylinder T: m = 0.61, r^2 = 0.09" [1] "LS CO2 vs. Cylinder T: m = 0.545, r^2 = 0.111" [1] "HS CO2 vs. Regulator T: m = -0.179, r^2 = 0.07" [1] "LS CO2 vs. Regulator T: m = -0.183, r^2 = 0.13" [1] "HS CO2 vs. Ref. Volumes T: m = 0.014, r^2 = 0" [1] "LS CO2 vs. Ref. Volumes T: m = -0.055, r^2 = 0.01" [1] "HS CO2 vs. Manifold T: m = -0.13, r^2 = 0.33" [1] "LS CO2 vs. Manifold T: m = -0.102, r^2 = 0.323" [1] "HS CO2 vs. Pump Box T: m = -0.08, r^2 = 0.26" [1] "LS CO2 vs. Pump Box T: m = -0.067, r^2 = 0.262" [1] "HS O2 vs. Cylinder T: m = -12.99, r^2 = 0.07" [1] "LS O2 vs. Cylinder T: m = -7.745, r^2 = 0.005" [1] "HS O2 vs. Regulator T: m = 10.05, r^2 = 0.41" [1] "LS O2 vs. Regulator T: m = 8.318, r^2 = 0.057" [1] "HS O2 vs. Ref. Volumes T: m = 4.13, r^2 = 0.06" [1] "LS O2 vs. Ref. Volumes T: m = 6.424, r^2 = 0.028" [1] "HS O2 vs. Manifold T: m = 3.561, r^2 = 0.44" [1] "LS O2 vs. Manifold T: m = 3.538, r^2 = 0.082" [1] "HS O2 vs. Pump Box T: m = 2.375, r^2 = 0.4" [1] "LS O2 vs. Pump Box T: m = 2.023, r^2 = 0.051" [1] "HS CO2 vs. WT P: m = 0, r^2 = 0" [1] "LS CO2 vs. WT P: m = 0, r^2 = 0.008" [1] "HS CO2 vs. SP P: m = 9.12e-05, r^2 = 0" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.035, r^2 = 0.11" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.035, r^2 = 0.11" [1] "LS CO2 vs. SP P: m = -8.84e-05, r^2 = 0" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.021, r^2 = 0.12" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.02, r^2 = 0.12" [1] "HS CO2 vs. WT FL: m = -0.09, r^2 = 0.14" [1] "LS CO2 vs. WT FL: m = -0.077, r^2 = 0.2" [1] "HS CO2 vs. SP FL: m = -0.022, r^2 = 0.02" [1] "LS CO2 vs. SP FL: m = -0.01, r^2 = 0.006" [1] "HS O2 vs. SLPDIFF: m = 0.497, r^2 = 0.07" [1] "LS O2 vs. SLPDIFF: m = 0.929, r^2 = 0.033" [1] "HS O2 vs. WT P: m = 0.042, r^2 = 0.09" [1] "LS O2 vs. WT P: m = 0.046, r^2 = 0.022" [1] "HS O2 vs. SP P: m = 0.043, r^2 = 0.1" [1] "LS O2 vs. SP P: m = 0.041, r^2 = 0.018" [1] "HS O2 vs. WT FL: m = 4.085, r^2 = 0.5" [1] "LS O2 vs. WT FL: m = 4.663, r^2 = 0.154" [1] "HS O2 vs. SP FL: m = -0.225, r^2 = 0" [1] "LS O2 vs. SP FL: m = -0.026, r^2 = 0" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 47.8, 63.2" [1] "Empirical LP O2 lag flow(s): 108.5, 104.1" [1] "Empirical LP CO2 lag time(s): 72.25, 41.17" [1] "Empirical LP CO2 lag flow(s): 108.5, 104.1" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.43" [1] "Median all HS CO2 SD = 0.41" [1] "Median all LS CO2 SD = 0.43" [1] "Median all LT CO2 SD = 0.44" [1] "Median all WT CO2 SD = 0.42" [1] "Median all HS or LS CO2 SD = 0.42" [1] "Median all cal O2 SD = 1.99" [1] "Median all HS O2 SD = 1.68" [1] "Median all LS O2 SD = 2.48" [1] "Median all LT O2 SD = 1.53" [1] "Median all WT O2 SD = 1.7" [1] "Median all HS or LS O2 SD = 1.85" [1] "Median all cal CO2 Slope = 0.04" [1] "Median all HS CO2 Slope = 0.07" [1] "Median all LS CO2 Slope = 0.04" [1] "Median all LT CO2 Slope = -0.04" [1] "Median all WT CO2 Slope = 0.07" [1] "Median all HS or LS CO2 Slope = 0.05" [1] "Median all cal O2 Slope = 0.69" [1] "Median all HS O2 Slope = 0.81" [1] "Median all LS O2 Slope = 3.71" [1] "Median all LT O2 Slope = -0.73" [1] "Median all WT O2 Slope = -0.03" [1] "Median all HS or LS O2 Slope = 1.33" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 4.68 per meg" [1] "Initial O2 Calibration Offset = 1.03 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.23 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 0.05 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -7.71 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 48128.6 88761.4" [1] "Time lag adjustments = 7 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 48.5 at 107.9 sccm" [1] "Median O2 delay + tlagff = 49.2 at 107.9 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 47.8 at 107.9 sccm" [1] "Median O2 delay from 3-way + tlagff = 48.5 at 107.9 sccm" [1] "after calc and ff lag: 48076.35 88709.87" [1] "2025-05-13 16:54:08 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] -23.82557256 -23.82557256 -27.87501179 -28.25048051 -28.36222062 [6] -28.38935181 -23.66210078 -16.95760382 -18.03491875 -20.11380185 [11] -22.94561357 -29.57493512 -29.57493512 -29.41416868 -27.27425148 [16] -17.07533828 -16.29390187 -15.95918805 -15.96950346 -17.78189318 [21] -17.78189318 -17.78189318 -17.78189318 -15.05355744 -15.05355744 [26] -15.05355744 -15.05355744 -15.90052990 -15.90052990 -15.53490043 [31] -14.15527023 -17.26717371 -17.26717371 -17.26717371 -17.26717371 [36] -19.04105052 -20.60576882 -20.60576882 -20.60576882 -15.53389796 [41] -14.52351799 -14.29337798 -14.29337798 -16.47073934 -14.93069881 [46] -13.85510442 -13.85510442 -5.43347650 -5.27606476 -5.27606476 [51] -5.27606476 -10.24211673 -14.39223653 -14.39223653 -14.39223653 [56] -12.77695627 -10.99800018 -10.38963073 -10.38963073 -11.77272751 [61] -17.21966113 -19.90456079 -20.54073877 -20.54073877 -14.93414956 [66] -16.70081391 -18.95810501 -19.86628362 -16.52019009 -16.52019009 [71] -11.81014506 -11.81014506 -10.42991240 -9.80842451 -9.59673245 [76] -7.95221886 -10.94056126 -12.75172183 -12.87610640 -12.87634455 [81] -10.78225617 -10.78290380 -10.78290380 -10.80836190 -14.30782583 [86] -14.30782583 -14.30782583 -11.48590067 -16.55561573 -18.01609007 [91] -14.66547332 -12.02369829 -8.31648363 -2.83689284 -4.19594937 [96] -7.15035087 -9.45280910 -9.66337565 -9.66337565 -9.75111609 [101] -11.33424941 -12.82669687 -14.81474780 -14.81474780 -14.99645884 [106] -15.14223017 -13.61523830 -10.29740752 -6.77626654 -11.10962180 [111] -11.10962180 -11.10962180 -19.29216114 -13.36943242 -13.36943242 [116] -14.38256940 -14.87447530 -21.02221445 -17.97141208 -15.84655023 [121] -15.84655023 -19.93050074 -20.25688787 -20.25688787 -24.07083473 [126] -28.16753536 -28.16753536 -28.16753536 -19.40837029 -18.58647585 [131] -18.58647585 -18.42708007 -18.14541238 -14.91271460 -13.97382455 [136] -17.90409353 -19.01319208 -18.10170011 -16.66290610 -14.12070942 [141] -11.02855265 -9.71484668 -14.89027955 -14.89027955 -15.35469680 [146] -16.48453083 -11.01356565 -13.61367330 -14.30694626 -14.30694626 [151] -25.13666349 -25.13666349 -24.99583968 -24.88045853 -24.95703535 [156] -24.96735814 -25.00273895 -25.04280001 -17.43740450 -17.36535123 [161] -16.86990110 -15.04963462 -15.35132511 -15.92153266 -15.92153266 [166] -15.92153266 -15.92153266 -12.16375872 -12.16375872 -12.16375872 [171] -12.16375872 -14.79929712 -14.79403747 -14.76764888 -14.73540731 [176] -15.82002116 -15.80987456 -15.80987456 -15.80992259 -14.95446863 [181] -14.95446863 -14.95446863 -14.95446863 -18.45911198 -18.76370636 [186] -18.76370636 -18.76370636 -17.96871382 -16.34137189 -16.01846625 [191] -14.80766751 -13.57140600 -13.11931696 -12.75890099 -12.81564731 [196] -14.05574192 -20.87925573 -20.96600776 -20.77597162 -20.82448802 [201] -15.44723036 -15.21698179 -13.61150281 -13.36490624 -13.63449359 [206] -13.63449359 -14.52485718 -18.59729151 -19.85010646 -19.85010646 [211] -19.86845534 -19.89050179 -18.89723121 -17.75186856 -16.93008901 [216] -16.90601463 -14.07114885 -8.66602330 -8.66020352 -8.68762069 [221] -10.58155987 -13.00799107 -13.00799107 -13.00799107 -13.00799107 [226] -13.39499583 -13.39499583 -13.39499583 -13.39499583 -10.98530463 [231] -10.68039726 -10.40375067 -10.40375067 -13.88897564 -15.33836023 [236] -14.74865214 -14.74865214 -20.81535517 -21.64299165 -16.99740757 [241] -16.58831996 -16.92423679 -17.06261035 -13.44697466 -13.17318436 [246] -10.63929803 -10.52375843 -20.34303221 -20.34303221 -18.25606458 [251] -25.40608367 -25.71163757 -25.71163757 -22.70183420 -12.33035010 [256] -13.12928676 -13.40779095 -13.66358923 -15.54831232 -15.84934331 [261] -15.84934331 -15.45867089 -20.92189176 -20.80051775 -20.80051775 [266] -20.66894582 -11.22614646 -11.22614646 -11.22614646 -11.22614646 [271] -13.08076126 -13.08076126 -13.08076126 -13.16725927 -12.35989538 [276] -13.68673228 -13.68673228 -13.68673228 -12.60687849 -10.80153933 [281] -10.80153933 -10.80153933 -11.57952884 -11.90776568 -8.59652654 [286] -8.04282590 -8.04282590 -6.20997520 -6.20997520 -6.20997520 [291] -6.20997520 -9.26880747 -8.49091278 -8.49091278 -8.49091278 [296] -1.42185296 -1.42185296 -0.88727925 -0.42474142 -3.15135652 [301] -3.10102774 -3.10102774 -3.10102774 -8.63044834 -10.82053016 [306] -13.66286244 -13.95416404 -14.94000136 -15.57552772 -15.48142233 [311] -15.32363115 -14.85316043 -14.18065057 -14.18065057 -14.18065057 [316] -14.18065057 -13.93851734 -11.23808682 -9.56384057 -9.56384057 [321] -0.09030517 -0.17952654 -0.37790165 -2.85068117 -13.29313041 [326] -13.29313041 -13.29313041 -13.29313041 -5.99120889 -5.99120889 [331] -5.25241229 -2.70009521 -3.91746556 -3.91746556 -3.91746556 [336] -3.91746556 -4.47345432 -5.02751474 -5.02751474 -5.02751474 [341] -6.17186636 -8.95875962 -9.05311877 -7.96543871 -7.94289226 [346] -1.97176750 -1.97176750 -1.97176750 -1.97176750 -6.85324536 [351] -9.32409014 -9.32409014 -9.32409014 -8.81149929 -8.79571391 [356] -8.76720758 -8.76720758 -14.29369358 -14.29369358 -13.86846111 [361] -10.86155670 -7.67254436 -5.10491452 -5.10491452 -5.10491452 [366] -8.02621478 -10.55569565 -10.66995426 -10.66995426 -10.66995426 [371] NA NA NA NA NA [376] NA NA [1] 150.7741 151.3029 152.3626 153.6695 154.9074 156.6088 158.4684 160.5125 [9] 162.0266 164.2328 165.9945 167.5672 169.0101 170.2521 171.1976 171.7972 [17] 172.1425 172.2904 172.2859 172.4589 172.4700 172.5956 172.8789 173.3596 [25] 173.7169 174.4758 175.2098 176.0566 177.9472 179.0357 180.2735 181.6185 [33] 182.9639 184.3664 185.7612 187.5168 189.5609 191.3110 193.1551 194.9384 [41] 196.9189 198.7585 200.8190 202.6754 204.6750 206.8063 209.2670 211.4950 [49] 213.5433 215.3105 217.3363 219.3710 221.2787 222.9169 224.5619 226.1898 [57] 228.0876 229.9084 231.9242 233.6752 235.7705 237.6250 239.6031 241.1313 [65] 243.1225 244.8541 246.2792 248.0461 249.8876 252.1872 254.9616 257.8929 [73] 261.2154 264.6063 267.9029 271.7598 274.4957 277.9153 280.4390 282.9503 [81] 285.4222 287.2132 289.6603 291.4322 293.5061 295.5182 297.7389 299.7628 [89] 301.9881 304.3140 306.3336 308.1962 309.7604 311.3808 312.8651 314.3334 [97] 315.5489 316.8428 317.8897 318.9993 320.1749 321.2541 322.4008 323.4509 [105] 324.7917 325.8158 327.0028 328.0412 329.1152 330.2794 331.4224 333.1587 [113] 334.9871 337.0629 339.1255 341.3317 343.5592 345.8984 348.4677 350.9243 [121] 353.8384 356.1513 358.5798 360.5687 362.8587 364.8277 366.7268 368.7995 [129] 370.7246 372.6118 374.4865 376.3711 378.2309 380.1212 381.9544 383.6389 [137] 385.1956 387.0399 388.6731 389.9852 391.2741 392.4324 393.4416 394.4631 [145] 395.3320 396.3116 397.1295 397.9192 398.7136 399.4932 400.2489 401.0612 [153] 401.8786 402.4433 402.6932 402.6427 402.4695 402.2735 402.2859 402.6386 [161] 403.0512 403.5803 404.0684 404.5784 405.1226 405.6754 406.2197 406.7423 [169] 407.3264 407.8543 408.4530 408.8631 409.2876 409.6525 410.0983 410.4033 [177] 410.6160 410.6125 410.5430 410.6477 410.9126 411.3656 411.9371 412.4424 [185] 412.9941 413.5081 414.0518 414.6689 415.1500 415.6340 416.0219 416.4181 [193] 416.6840 416.7995 416.7813 416.6509 416.5354 416.5076 416.5685 416.5530 [201] 416.4482 416.5220 417.0364 417.9425 419.1195 420.4521 422.1448 423.8013 [209] 425.9900 427.7779 429.5469 431.5509 433.5347 435.6370 437.5602 439.2874 [217] 440.6283 441.2425 441.3112 440.9874 440.3359 439.9372 439.6680 439.3330 [225] 439.1303 439.0214 438.9702 439.1328 439.7867 441.1554 442.9680 445.0924 [233] 447.4071 449.6572 452.8527 455.7045 458.4940 461.1287 464.2891 467.6255 [241] 470.6153 473.6474 476.6142 479.5565 482.2348 486.1070 488.9539 491.8148 [249] 494.8152 497.5565 499.9803 502.1050 504.9908 507.3766 510.3000 512.7029 [257] 514.8714 517.1377 519.0033 520.2744 521.8069 523.1688 524.5709 525.9249 [265] 527.2688 528.5024 529.8227 531.0995 532.2876 533.4725 535.0397 536.2055 [273] 537.5192 538.7880 540.0950 541.3526 542.3464 543.5344 544.5987 545.6246 [281] 546.6818 547.7163 548.6908 549.5773 550.3282 550.8860 551.5285 552.0364 [289] 552.6146 553.2010 553.8208 554.6053 555.3663 556.2315 557.0971 558.0580 [297] 558.8957 559.7438 560.5697 561.3852 562.2179 563.0284 563.8068 564.6205 [305] 565.5017 566.2783 567.0384 567.8506 568.7645 569.5394 570.3742 571.2528 [313] 572.0871 572.8502 573.6016 574.3830 575.1408 575.8318 576.5913 577.3018 [321] 578.1758 578.9534 579.6610 580.3953 581.1205 581.7446 582.3608 583.0369 [329] 583.5610 584.1138 584.5659 585.1048 585.6182 586.0095 586.1823 586.1161 [337] 585.9599 585.7492 585.5782 585.4496 585.2984 585.2268 585.2069 585.4365 [345] 585.8867 586.5237 587.1753 587.8566 588.6057 589.5219 590.2875 591.3467 [353] 592.2614 593.1139 594.0339 594.9005 595.8025 596.6572 597.5159 598.3806 [361] 599.2251 600.0796 601.0537 601.9013 602.7312 603.6793 604.3930 605.2951 [369] 606.2216 607.0180 608.1804 608.8722 609.8630 610.6767 611.5320 612.3362 [377] 613.1006 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 40 O2 values from manual exclude period 114.853048 to 114.854176" [1] "Not reporting 40 APO values from manual exclude period 114.853048 to 114.854176" [1] "Not reporting 30 O2 values from manual exclude period 114.895633 to 114.896479" [1] "Not reporting 30 APO values from manual exclude period 114.895633 to 114.896479" [1] "Not reporting 30 O2 values from manual exclude period 114.924963 to 114.925809" [1] "Not reporting 30 APO values from manual exclude period 114.924963 to 114.925809" [1] "Not reporting 28 O2 values from manual exclude period 114.968113 to 114.968959" [1] "Not reporting 28 APO values from manual exclude period 114.968113 to 114.968959" [1] "Not reporting 99 smoothed O2 values from manual exclude period 114.852431154874 to 114.8535782466" [1] "Not reporting 99 smoothed APO values from manual exclude period 114.852431154874 to 114.8535782466" [1] "Not reporting 74 smoothed O2 values from manual exclude period 114.895016382935 to 114.89587377279" [1] "Not reporting 74 smoothed APO values from manual exclude period 114.895016382935 to 114.89587377279" [1] "Not reporting 74 smoothed O2 values from manual exclude period 114.924385145895 to 114.925237406029" [1] "Not reporting 74 smoothed APO values from manual exclude period 114.924385145895 to 114.925237406029" [1] "Not reporting 74 smoothed O2 values from manual exclude period 114.967560771517 to 114.968414959316" [1] "Not reporting 74 smoothed APO values from manual exclude period 114.967560771517 to 114.968414959316" [1] "Not reporting 99 smoothed O2 values from manual exclude period 114.852431154874 to 114.8535782466" [1] "Not reporting 99 smoothed APO values from manual exclude period 114.852431154874 to 114.8535782466" [1] "Not reporting 74 smoothed O2 values from manual exclude period 114.895016382935 to 114.89587377279" [1] "Not reporting 74 smoothed APO values from manual exclude period 114.895016382935 to 114.89587377279" [1] "Not reporting 74 smoothed O2 values from manual exclude period 114.924385145895 to 114.925237406029" [1] "Not reporting 74 smoothed APO values from manual exclude period 114.924385145895 to 114.925237406029" [1] "Not reporting 74 smoothed O2 values from manual exclude period 114.967560771517 to 114.968414959316" [1] "Not reporting 74 smoothed APO values from manual exclude period 114.967560771517 to 114.968414959316" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1804/AO2_DC8_20180424_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 136812 items [1] 1 3421 34203 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] NA -341.9233 -337.1744 -336.7744 -332.7211 -335.0111 [1] 34811 [1] "Average Date / Time for slice RF01 = 2018-04-24 19:26:59.0630762577057" [1] "sum(lsel) = 2711" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.262 803.282 [1] 0.262 803.282 [1] 196.718 999.738 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 698.671" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF01 APO_AO2 range = -335.32,-304.42" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1804/AO2_DC8_20180424_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 136812 items [1] 1 3421 34203 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] NA -717.3056 -706.3278 -704.2311 -696.7667 -699.8833 [1] 34821 [1] "Average Date / Time for slice RF01 = 2018-04-24 19:27:04.59808254241943" [1] "sum(lsel) = 2712" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.262 803.282 [1] 0.262 803.282 [1] 196.718 999.738 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 698.671" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF01 O2_AO2 range = -696.62,-641.18" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1804/AO2_DC8_20180424_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 136812 items [1] 1 3421 34203 [1] "done reading AO2" [1] 2018 2018 2018 2018 2018 2018 [1] 114 114 114 114 114 114 [1] 53100 53110 53120 53130 53140 53150 [1] "2018-04-24 14:45:00 UTC" "2018-04-24 14:45:10 UTC" [3] "2018-04-24 14:45:20 UTC" "2018-04-24 14:45:30 UTC" [5] "2018-04-24 14:45:40 UTC" "2018-04-24 14:45:50 UTC" [1] NA 421.4592 420.2737 419.9503 419.3010 419.4584 [1] 34994 [1] "Average Date / Time for slice RF01 = 2018-04-24 19:29:05.98837208747864" [1] "sum(lsel) = 2752" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.262 803.282 [1] 0.262 803.282 [1] 196.718 999.738 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 698.671" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM4 RF01 CO2_AO2 range = 413.61,419.47" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"