[1] "2025-05-13 16:38:57 MDT" options [1,] "file" "171025a" [2,] "flight" "RF12" [3,] "project" "ATOM3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "17" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "171025a" [1] "Reading in flight and plotting intervals" Read 26 records [1] "Reading in /scr/raf/stephens/AO2DAT/171025a.mr" Read 16652 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.39 seconds" [1] "New JOGEST = 2.39 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/171025a.hr" Read 66608 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 04:38:57 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30767 description: HS CO2 = 378.73 O2 = -552.4" [1] "position 2 cylinder OK30768 description: LS CO2 = 408.78 O2 = -697.9" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -583.6" [1] "position 4 cylinder OK30770 description: WT CO2 = 398.49 O2 = -708.2" [1] "position 5 cylinder OK30771 description: LP CO2 = 391.32 O2 = -449.7" [1] 378.7299 408.7756 393.4136 398.4916 391.3173 [1] -552.4474 -697.9082 -583.5654 -708.1860 -449.6529 [1] "Nominal linear calibrations:" [1] "co2scl = 1.056 co2off = 6.99 o2scla = -0.056 o2offa = -122.6" [1] "(dV/V)/(dXO2/XO2) = -3.766" [1] "(dV/V)/d(O2/N2) = -2.977" [1] "Reading in very high resolution timeseries" Read 333040 records [1] 333040 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:38:58 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:39:00 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -2.977" [1] "o2scaleavenew_drelVdrelP = -3.766" [1] "median(o2scalenew) = -2.993" [1] "Empirical dV/V vs dP/P relationship =-4.171, r^2 =0.339, damping =1.108" [1] "Tue May 13 04:39:00 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 16064 $icochar [1] "0" "0" "23:36:32" "13:56:04" "15:01:30" [6] "298.633903" "298.635283" "298.798866" "298.930725" "298.947552" [11] "298.584249" "298.633628" "298.656248" "298.683282" "298.700385" [16] "298.727695" "298.758039" "298.785900" "298.811279" "298.825072" [21] "298.835830" "298.851002" "298.864795" "298.888243" "298.916380" [26] "298.953897" $ecochar [1] "367" "13:56:04" "367" "23:36:32" "15:02:30" [6] "298.634731" "298.635559" "298.799417" "298.931553" "298.948656" [11] "298.633628" "298.659834" "298.683558" "298.704523" "298.727695" [16] "298.760797" "298.785900" "298.814589" "298.825072" "298.838313" [21] "298.851002" "298.867278" "298.888243" "298.916380" "298.953897" [26] "298.983414" $flag [1] "all" "LP" "LP" "flight" [5] "breath" "donotreporto2" "donotreporto2" "donotreporto2" [9] "donotreporto2" "donotreporto2" "a" "b" [13] "c" "d" "e" "f" [17] "g" "h" "i" "j" [21] "k" "l" "m" "n" [25] "o" "p" $ico2 [1] 0.0000 0.0000 298.9837 298.5806 298.6260 298.6339 298.6353 298.7989 [9] 298.9307 298.9476 298.5842 298.6336 298.6562 298.6833 298.7004 298.7277 [17] 298.7580 298.7859 298.8113 298.8251 298.8358 298.8510 298.8648 298.8882 [25] 298.9164 298.9539 $eco2 [1] 367.0000 298.5806 367.0000 298.9837 298.6267 298.6347 298.6356 298.7994 [9] 298.9316 298.9487 298.6336 298.6598 298.6836 298.7045 298.7277 298.7608 [17] 298.7859 298.8146 298.8251 298.8383 298.8510 298.8673 298.8882 298.9164 [25] 298.9539 298.9834 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 16063 16063 298.9837 8.216107 -0.00100150 0.00849590 0.00849590 16063 16064 16064 298.9837 8.215833 -0.00134525 0.00874305 0.00874305 16064 16065 16065 298.9837 8.215423 -0.00074640 0.00872435 0.00872435 16065 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 16063 10.5 1.0 63.0 26290.5 -1 8.220477 8.220050 16064 10.5 3.5 63.5 13155.5 1 8.220481 8.219908 16065 10.5 6.0 64.0 20.5 -1 8.219778 8.219460 vuvsigpdprcorr 16063 8.216434 16064 8.216187 16065 8.215747 [1] 0.9836715 0.9836988 0.9837261 [,1] [,2] [,3] [1,] 0.983683 -1 1 [2,] 0.983693 1 1 [3,] 0.983699 1 1 [4,] 0.983704 1 6 [5,] 0.983710 1 6 [6,] 0.983720 -1 6 [7,] 0.983726 -1 6 [8,] 0.983732 -1 6 [9,] 0.983737 -1 6 [10,] 0.983747 1 6 [11,] 0.983753 1 6 [12,] 0.983759 1 6 [13,] 0.983765 1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 16064 $icochar [1] "0" "0" "23:36:32" "13:56:04" "15:01:30" [6] "298.633903" "298.635283" "298.798866" "298.930725" "298.947552" [11] "298.584249" "298.633628" "298.656248" "298.683282" "298.700385" [16] "298.727695" "298.758039" "298.785900" "298.811279" "298.825072" [21] "298.835830" "298.851002" "298.864795" "298.888243" "298.916380" [26] "298.953897" $ecochar [1] "367" "13:56:04" "367" "23:36:32" "15:02:30" [6] "298.634731" "298.635559" "298.799417" "298.931553" "298.948656" [11] "298.633628" "298.659834" "298.683558" "298.704523" "298.727695" [16] "298.760797" "298.785900" "298.814589" "298.825072" "298.838313" [21] "298.851002" "298.867278" "298.888243" "298.916380" "298.953897" [26] "298.983414" $flag [1] "all" "LP" "LP" "flight" [5] "breath" "donotreporto2" "donotreporto2" "donotreporto2" [9] "donotreporto2" "donotreporto2" "a" "b" [13] "c" "d" "e" "f" [17] "g" "h" "i" "j" [21] "k" "l" "m" "n" [25] "o" "p" $ico2 [1] 0.0000 0.0000 298.9837 298.5806 298.6260 298.6339 298.6353 298.7989 [9] 298.9307 298.9476 298.5842 298.6336 298.6562 298.6833 298.7004 298.7277 [17] 298.7580 298.7859 298.8113 298.8251 298.8358 298.8510 298.8648 298.8882 [25] 298.9164 298.9539 $eco2 [1] 367.0000 298.5806 367.0000 298.9837 298.6267 298.6347 298.6356 298.7994 [9] 298.9316 298.9487 298.6336 298.6598 298.6836 298.7045 298.7277 298.7608 [17] 298.7859 298.8146 298.8251 298.8383 298.8510 298.8673 298.8882 298.9164 [25] 298.9539 298.9834 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 16063 16063 298.9837 8.216107 -0.00100150 0.00849590 0.00849590 16063 16064 16064 298.9837 8.215833 -0.00134525 0.00874305 0.00874305 16064 16065 16065 298.9837 8.215423 -0.00074640 0.00872435 0.00872435 16065 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 16063 10.5 1.0 63.0 26290.5 -1 8.220477 8.220050 16064 10.5 3.5 63.5 13155.5 1 8.220481 8.219908 16065 10.5 6.0 64.0 20.5 -1 8.219778 8.219460 vuvsigpdprcorr 16063 8.216434 16064 8.216187 16065 8.215747 [1] 0.9836715 0.9836988 0.9837261 [,1] [,2] [,3] [1,] 0.983683 -1 1 [2,] 0.983693 1 1 [3,] 0.983699 1 1 [4,] 0.983704 1 6 [5,] 0.983710 1 6 [6,] 0.983720 -1 6 [7,] 0.983726 -1 6 [8,] 0.983732 -1 6 [9,] 0.983737 -1 6 [10,] 0.983747 1 6 [11,] 0.983753 1 6 [12,] 0.983759 1 6 [13,] 0.983765 1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:39:50 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 6448455.565632 SECONDS" [1] "Tue May 13 04:39:50 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 150.769 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 61.301 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 60.962 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 29.056 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 15 [1] 33 [1] 90 [1] 91 [1] 91 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 298.5397 -337.0698542 1032845.9 1 [2,] 4 298.5398 -1030.8986102 1031812.7 -1 [3,] 5 298.5398 -618.6793673 1032873.3 1 [4,] 6 298.5398 -254.7776523 1032633.3 -1 [5,] 8 298.5399 -23.4732035 1032847.6 -1 [6,] 70 298.5416 -372.4998543 1033219.3 -1 [7,] 134 298.5434 -168.9828937 1034194.1 -1 [8,] 198 298.5451 -300.4144051 1034563.0 -1 [9,] 262 298.5469 -770.2700903 1034609.5 -1 [10,] 382 298.5502 -911.6082894 1035269.7 -1 [11,] 383 298.5502 -613.6519530 1036215.4 1 [12,] 384 298.5502 -265.1032887 1035980.9 -1 [13,] 448 298.5520 -514.3895725 1036086.9 -1 [14,] 510 298.5537 -801.6815905 1036201.3 -1 [15,] 762 298.5606 -677.9940209 1036933.7 -1 [16,] 826 298.5624 -76.6726296 1037409.9 -1 [17,] 950 298.5658 -78.5886265 1037093.3 -1 [18,] 951 298.5658 -451.8112836 1037189.2 1 [19,] 952 298.5658 -796.6285092 1036362.1 -1 [20,] 1140 298.5711 -827.5174652 1035662.4 -1 [21,] 1141 298.5711 -472.9173475 1036497.6 1 [22,] 1142 298.5711 -109.8018206 1036393.9 -1 [23,] 1204 298.5728 -412.7550816 1035626.3 -1 [24,] 1330 298.5763 -715.8724285 1032847.8 -1 [25,] 1332 298.5764 -858.0126310 1032631.2 -1 [26,] 2352 298.6046 -265.6167466 995154.7 -1 [27,] 2358 298.6048 -512.2649803 994774.0 -1 [28,] 2420 298.6065 -332.8016663 993679.5 -1 [29,] 2422 298.6066 -53.4640860 993886.6 -1 [30,] 3272 298.6301 -231.9377926 980094.5 -1 [31,] 3340 298.6320 -498.8349519 979566.3 -1 [32,] 4708 298.6699 -253.2739586 980088.6 -1 [33,] 4774 298.6717 -541.4318021 980501.1 -1 [34,] 4775 298.6717 -257.3980414 981028.9 1 [35,] 4776 298.6717 -49.0580005 981006.1 -1 [36,] 4838 298.6734 -212.1043823 981053.3 -1 [37,] 4902 298.6752 -31.3501405 981079.9 -1 [38,] 5621 298.6951 -215.5147343 987314.8 1 [39,] 5622 298.6952 -284.4510017 987195.6 -1 [40,] 5623 298.6952 -317.0523060 987576.2 1 [41,] 5757 298.6989 -184.8023936 992876.9 1 [42,] 5758 298.6989 -205.8314386 992858.1 -1 [43,] 5759 298.6990 -304.1637831 993135.6 1 [44,] 6338 298.7150 -270.8777696 991845.7 -1 [45,] 6406 298.7169 -458.9546200 991848.2 -1 [46,] 6964 298.7323 -236.9188543 996767.7 -1 [47,] 7032 298.7342 -51.3407255 997038.4 -1 [48,] 7291 298.7413 -53.1892960 996546.9 1 [49,] 7292 298.7414 -64.4250039 996627.7 -1 [50,] 7293 298.7414 -177.9315832 996757.8 1 [51,] 7597 298.7499 -209.2548550 1000086.8 1 [52,] 7598 298.7499 -296.9656156 999941.1 -1 [53,] 7599 298.7499 -363.1502596 1000318.4 1 [54,] 8412 298.7724 -234.4296050 995159.7 -1 [55,] 8418 298.7726 -504.8313620 994807.0 -1 [56,] 8480 298.7743 -176.4124627 994409.4 -1 [57,] 8544 298.7761 -342.8951899 993587.8 -1 [58,] 8940 298.7870 -197.4550314 999708.5 -1 [59,] 8946 298.7872 0.6329165 1000042.4 -1 [60,] 9006 298.7889 -267.0033880 1001016.5 -1 [61,] 9068 298.7906 -237.2614139 1001902.4 -1 [62,] 9371 298.7989 -100.2375305 1002237.7 1 [63,] 9372 298.7989 -134.6023107 1002326.1 -1 [64,] 9373 298.7989 -284.9447192 1002535.8 1 [65,] 10146 298.8203 -208.8988649 1002027.4 -1 [66,] 10152 298.8205 -459.0125565 1001657.2 -1 [67,] 10216 298.8222 -1.3128320 1000967.1 -1 [68,] 11014 298.8443 -221.9450480 1001768.1 -1 [69,] 11020 298.8444 -32.2885795 1002007.1 -1 [70,] 11082 298.8462 -174.5515987 1001867.7 -1 [71,] 11084 298.8462 -472.5549899 1001578.6 -1 [72,] 12316 298.8803 -213.0638845 1001117.7 -1 [73,] 12320 298.8805 -382.3240505 1000867.5 -1 [74,] 12384 298.8822 -8.9935471 1000260.6 -1 [75,] 13944 298.9255 -181.9334523 1001749.7 -1 [76,] 13950 298.9256 -9.9931691 1002077.6 -1 [77,] 14012 298.9273 -319.8900642 1003851.3 -1 [78,] 14076 298.9291 -30.8623761 1006186.0 -1 [79,] 14562 298.9425 -196.4927179 1011328.1 -1 [80,] 14568 298.9427 -482.5284394 1011118.5 -1 [81,] 14630 298.9444 4.1947515 1012298.6 -1 [82,] 14692 298.9461 -335.0829574 1012615.4 -1 [83,] 16064 298.9837 -53.8814679 1008478.0 -1 [84,] 16082 298.9842 -623.4514669 1007842.0 -1 [85,] 16084 298.9843 -866.7703588 1007622.4 -1 [86,] 16372 298.9921 -798.7736246 1008663.0 -1 [87,] 16373 298.9922 -503.0484347 1009472.5 1 [88,] 16374 298.9922 -172.8519066 1009337.1 -1 [89,] 16438 298.9939 -469.3030786 1009624.9 -1 [90,] 16564 298.9973 -9.2731085 1011407.7 -1 [91,] 16628 298.9991 -464.7374345 1011731.6 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 2515 298.6091 9.205970e+11 [2,] 3674 298.6412 9.434118e+04 [3,] 5831 298.7010 2.834890e+02 [4,] 11211 298.8497 9.575428e+03 [5,] 11334 298.8531 2.855850e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 150.769 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 46.574 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 39.237 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 29.056 PER MEG" [1] 378.7299 408.7756 393.4136 398.4916 391.3173 [1] -552.4474 -697.9082 -583.5654 -708.1860 -449.6529 [1] "Nominal linear calibrations:" [1] "co2scl = 1.056 co2off = 6.99 o2scla = -0.055 o2offa = -122.9" [1] "(dV/V)/(dXO2/XO2) = -3.797" [1] "(dV/V)/d(O2/N2) = -3.002" [1] "Finding cal and sample periods" [1] "Median Cal: 2.46 minutes" [1] "Average Cal: 2.41 minutes" [1] "Shortest Cal: 1.17 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 3 calibration period(s) with less than 30 seconds of data" [1] "at: 19" [1] "at: 33" [1] "at: 61" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-1HZ_DC8_20171025_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 620262 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-20Hz_DC8_20171025_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 17935840 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00218" [1] "HS CO2 vs. PACAB: m = -0.0024, r^2 = 0.58" [1] "LS CO2 vs. PACAB: m = -0.00196, r^2 = 0.39" [1] "HS+LS LIH2O vs. PACAB: m = -1.77e-05" [1] "HS LIH2O vs. PACAB: m = -7.48e-06, r^2 = 0.04" [1] "LS LIH2O vs. PACAB: m = -2.79e-05, r^2 = 0.13" [1] "HS+LS CO2 vs. LIH2O: m = 15.8" [1] "HS CO2 vs. LIH2O: m = 19.8, r^2 = 0.08" [1] "LS CO2 vs. LIH2O: m = 11.7, r^2 = 0.09" [1] "APCO2 vs. PACAB: m = 0.00656, r^2 = 0.09" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.0118" [1] "HS O2 vs. PACAB: m = 0.0161, r^2 = 0.05" [1] "LS O2 vs. PACAB: m = -0.0398, r^2 = 0.32" [1] "HS+LS O2 vs. LIH2O: m = -219" [1] "HS O2 vs. LIH2O: m = -766, r^2 = 0.2" [1] "LS O2 vs. LIH2O: m = 328, r^2 = 0.13" [1] "HS+LS O2 vs. PAO2: m = -1.65" [1] "HS O2 vs. PAO2: m = -3.24, r^2 = 0.07" [1] "LS O2 vs. PAO2: m = -0.0739, r^2 = 0" [1] "HS+LS O2 vs. TPBOX: m = -0.78" [1] "HS O2 vs. TPBOX: m = 0.199, r^2 = 0" [1] "LS O2 vs. TPBOX: m = -1.76, r^2 = 0.22" [1] "APO vs. PACAB: m = -0.109, r^2 = 0.09" [1] "APO vs. PAO2: m = -9.12, r^2 = 0.06" [1] "APO vs. TPBOX: m = 2.52, r^2 = 0.04" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.0506, r^2 = 0.01" [1] "LS CO2 vs. LiCor Cell P: m = -0.103, r^2 = 0.04" [1] "HS CO2 vs. CO2 Vol P: m = 0.398, r^2 = 0.31" [1] "LS CO2 vs. CO2 Vol P: m = 0.251, r^2 = 0.15" [1] "HS CO2 vs. SLOPE: m = -0.366, r^2 = 0.07" [1] "LS CO2 vs. SLOPE: m = -0.0551, r^2 = 0.01" [1] "HS O2 vs. O2 Vol P: m = -5.38, r^2 = 0.13" [1] "LS O2 vs. O2 Vol P: m = 1, r^2 = 0.01" [1] "HS O2 vs. O2 Cell T: m = 2.49, r^2 = 0.13" [1] "LS O2 vs. O2 Cell T: m = -0.424, r^2 = 0" [1] "HS O2 vs. CO2 Vol P: m = 1.4, r^2 = 0.01" [1] "LS O2 vs. CO2 Vol P: m = -0.332, r^2 = 0" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -1.38, r^2 = 0.03" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 0.102, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = 1.4, r^2 = 0.01" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -0.332, r^2 = 0" [1] "HS O2 vs. LIH2O: m = -675, r^2 = 0.35" [1] "LS O2 vs. LIH2O: m = 173, r^2 = 0.06" [1] "HS O2 vs. SLOPE: m = -0.378, r^2 = 0.06" [1] "LS O2 vs. SLOPE: m = -0.181, r^2 = 0.02" [1] "HS CO2 vs. Time: m = 13.807, r^2 = 0.86" [1] "LS CO2 vs. Time: m = 14.088, r^2 = 0.85" [1] "HS CO2 vs. Cylinder T: m = 0.278, r^2 = 0.01" [1] "LS CO2 vs. Cylinder T: m = -0.152, r^2 = 0.004" [1] "HS CO2 vs. Regulator T: m = -0.192, r^2 = 0.11" [1] "LS CO2 vs. Regulator T: m = -0.257, r^2 = 0.247" [1] "HS CO2 vs. Ref. Volumes T: m = -0.05, r^2 = 0.01" [1] "LS CO2 vs. Ref. Volumes T: m = -0.123, r^2 = 0.05" [1] "HS CO2 vs. Manifold T: m = -0.131, r^2 = 0.3" [1] "LS CO2 vs. Manifold T: m = -0.087, r^2 = 0.204" [1] "HS CO2 vs. Pump Box T: m = -0.15, r^2 = 0.46" [1] "LS CO2 vs. Pump Box T: m = -0.097, r^2 = 0.288" [1] "HS O2 vs. Cylinder T: m = 11.417, r^2 = 0.03" [1] "LS O2 vs. Cylinder T: m = -15.951, r^2 = 0.078" [1] "HS O2 vs. Regulator T: m = 1.567, r^2 = 0.01" [1] "LS O2 vs. Regulator T: m = -3.39, r^2 = 0.085" [1] "HS O2 vs. Ref. Volumes T: m = 6.178, r^2 = 0.24" [1] "LS O2 vs. Ref. Volumes T: m = 1.278, r^2 = 0.011" [1] "HS O2 vs. Manifold T: m = 1.011, r^2 = 0.03" [1] "LS O2 vs. Manifold T: m = -1.823, r^2 = 0.177" [1] "HS O2 vs. Pump Box T: m = 0.871, r^2 = 0.03" [1] "LS O2 vs. Pump Box T: m = -2.101, r^2 = 0.268" [1] "HS CO2 vs. WT P: m = -0.003, r^2 = 0.51" [1] "LS CO2 vs. WT P: m = -0.002, r^2 = 0.445" [1] "HS CO2 vs. SP P: m = -0.00274, r^2 = 0.65" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.028, r^2 = 0.52" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.031, r^2 = 0.52" [1] "LS CO2 vs. SP P: m = -0.00198, r^2 = 0.46" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.005, r^2 = 0.44" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.003, r^2 = 0.44" [1] "HS CO2 vs. WT FL: m = 0.063, r^2 = 0.09" [1] "LS CO2 vs. WT FL: m = 0.026, r^2 = 0.027" [1] "HS CO2 vs. SP FL: m = 0.067, r^2 = 0.61" [1] "LS CO2 vs. SP FL: m = 0.044, r^2 = 0.44" [1] "HS O2 vs. SLPDIFF: m = 0.194, r^2 = 0.05" [1] "LS O2 vs. SLPDIFF: m = -0.224, r^2 = 0.043" [1] "HS O2 vs. WT P: m = 0.018, r^2 = 0.04" [1] "LS O2 vs. WT P: m = -0.038, r^2 = 0.269" [1] "HS O2 vs. SP P: m = 0.018, r^2 = 0.04" [1] "LS O2 vs. SP P: m = -0.039, r^2 = 0.273" [1] "HS O2 vs. WT FL: m = 1.917, r^2 = 0.17" [1] "LS O2 vs. WT FL: m = 2.185, r^2 = 0.358" [1] "HS O2 vs. SP FL: m = 0.016, r^2 = 0" [1] "LS O2 vs. SP FL: m = 1.064, r^2 = 0.501" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 48.92, 47.29" [1] "Empirical LP O2 lag flow(s): 105.8, 108.8" [1] "Empirical LP CO2 lag time(s): 44.16, 40.2" [1] "Empirical LP CO2 lag flow(s): 105.8, 108.8" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.4" [1] "Median all HS CO2 SD = 0.36" [1] "Median all LS CO2 SD = 0.41" [1] "Median all LT CO2 SD = 0.38" [1] "Median all WT CO2 SD = 0.39" [1] "Median all HS or LS CO2 SD = 0.4" [1] "Median all cal O2 SD = 1.66" [1] "Median all HS O2 SD = 1.54" [1] "Median all LS O2 SD = 1.75" [1] "Median all LT O2 SD = 1.84" [1] "Median all WT O2 SD = 1.17" [1] "Median all HS or LS O2 SD = 1.64" [1] "Median all cal CO2 Slope = 0" [1] "Median all HS CO2 Slope = 0.01" [1] "Median all LS CO2 Slope = 0" [1] "Median all LT CO2 Slope = -0.08" [1] "Median all WT CO2 Slope = 0" [1] "Median all HS or LS CO2 Slope = 0.01" [1] "Median all cal O2 Slope = -0.59" [1] "Median all HS O2 Slope = -0.79" [1] "Median all LS O2 Slope = -1.24" [1] "Median all LT O2 Slope = -0.86" [1] "Median all WT O2 Slope = -0.55" [1] "Median all HS or LS O2 Slope = -0.8" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 6.25 per meg" [1] "Initial O2 Calibration Offset = 9.46 per meg" [1] "SD of O2 Calibration (post-takeoff) = 6.02 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 11.95 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 5.16 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 46628.09 86372.61" [1] "Time lag adjustments = 17 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 57.9 at 109.2 sccm" [1] "Median O2 delay + tlagff = 58.6 at 109.2 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 56.6 at 109.2 sccm" [1] "Median O2 delay from 3-way + tlagff = 57.2 at 109.2 sccm" [1] "after calc and ff lag: 46562.14 86310.49" [1] "2025-05-13 16:40:50 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] NA NA NA NA NA [6] NA NA NA NA NA [11] NA NA NA NA NA [16] NA NA NA NA NA [21] NA NA NA 10.50766309 18.20125091 [26] 8.31889425 7.12613412 8.55520918 -1.93890196 -1.93890196 [31] -1.93890196 -2.13764020 3.19903399 9.84255477 12.36591058 [36] 17.08456499 20.82479525 20.82479525 20.82479525 20.95849667 [41] 22.12045075 22.12045075 22.12045075 22.38399438 18.37186731 [46] 18.85360576 19.18251549 19.18251549 19.73216099 19.73216099 [51] 19.73216099 19.73216099 20.23085493 19.55481826 18.41248136 [56] 16.67341811 2.99948587 -13.80812448 -15.31631548 -18.35854051 [61] -10.36531715 0.25071297 0.25071297 0.25071297 0.46632402 [66] 2.19464055 -2.20987582 -2.20987582 -2.20987582 -6.02136266 [71] 6.69667575 8.32800447 8.32800447 -1.35724621 -2.17462784 [76] -2.17462784 -2.00963808 4.27543837 6.57110101 9.69387543 [81] 9.69387543 6.14911131 4.66300667 2.22296264 1.35070115 [86] -0.47557309 -1.04496716 -1.68635323 -2.87446648 -2.73273747 [91] -2.50612198 -1.69510544 3.47529896 3.47529896 7.64887161 [96] 6.78943132 -1.29340936 -2.12796810 -6.28749037 -6.28749037 [101] -3.45023383 -0.40151675 4.58097412 4.58097412 4.58097412 [106] 4.58097412 1.15488680 0.62065146 0.62065146 0.62065146 [111] -0.79124338 0.24433550 0.24433550 0.24433550 -2.10201419 [116] -2.46933007 4.25570435 6.81105127 7.52031625 15.73462527 [121] 15.73462527 13.87231876 8.53857015 -4.27751469 -4.27751469 [126] -4.27751469 -4.27751469 -3.41504504 -1.17572333 0.89529098 [131] 1.83228093 -1.59632117 -1.59632117 -1.59632117 -1.59701985 [136] 2.35738828 2.33800467 2.26620927 2.25574954 5.85750614 [141] 5.85750614 5.85750614 5.85750614 0.38938689 -1.49857540 [146] -1.85727854 -1.85727854 -0.66338264 0.36564417 0.36564417 [151] 0.36564417 0.36564417 0.86425541 -1.84934514 -3.08257920 [156] -3.08257920 -11.91302970 -11.91302970 -11.91302970 -11.91302970 [161] -5.62815061 -4.40989175 -1.70943052 1.04963985 3.53806474 [166] 3.53806474 3.53806474 3.53806474 2.56641162 2.11969217 [171] 2.11969217 2.11969217 2.31463667 3.04333923 2.69016289 [176] 2.37504702 2.12292634 3.43001641 3.17365181 3.16646893 [181] 3.16646893 2.30797534 2.30797534 2.30797534 2.30797534 [186] -2.94610395 -2.94610395 -3.02312864 -3.96894497 -5.81993548 [191] -6.75907300 -7.38022574 -7.38022574 -3.03754811 -2.72591535 [196] -2.72591535 -2.72591535 -2.09833361 -1.13160231 -0.28988150 [201] 0.20090500 0.20090500 -2.41739469 -2.41739469 -2.12698572 [206] -0.87301151 -3.42923201 -3.42923201 -3.42923201 -3.72059206 [211] -11.77280867 -11.84868235 -11.84868235 -11.84868235 -0.09876364 [216] 1.37973490 1.37973490 1.37973490 -1.33867198 -2.62125924 [221] -2.96278759 -2.96278759 -3.34527320 -5.85109843 -7.11367711 [226] -7.11367711 -6.00887725 -3.41301147 4.68797028 4.68797028 [231] 4.30929149 1.16148321 0.14754868 -2.27280140 -0.81479247 [236] 7.82349580 7.82349580 7.98922772 8.22403206 4.53787289 [241] 4.53787289 4.53787289 3.40894886 -1.04569399 -2.86715395 [246] -3.52578923 -3.52578923 -5.33688897 -5.33688897 -5.33688897 [251] -5.33688897 -7.44758122 -6.56883954 -4.00725657 -3.70437703 [256] -3.44090275 -1.78141378 -1.78141378 -1.78141378 -1.38656182 [261] -0.68747403 -4.53481994 -4.87211722 -4.87211722 -11.81981682 [266] -11.81981682 -11.81981682 -10.64531747 -0.71809746 0.97655263 [271] 0.97655263 0.97655263 -6.56520904 -6.78834001 -6.78834001 [276] -6.78834001 3.97172277 11.06964037 11.26413230 11.32400543 [281] 10.42064182 -0.97216494 -0.97216494 -1.20701106 -1.44347198 [286] 0.81115948 0.19575360 0.19575360 0.19575360 4.99889990 [291] 4.99889990 4.99889990 5.70967045 -3.40403780 -1.87735192 [296] 0.00479798 0.00479798 8.17704380 8.17704380 8.17704380 [301] 8.17704380 -1.80103983 -1.80103983 -3.86611529 -8.39827901 [306] -6.27159133 -2.86954189 -2.86954189 -2.86954189 -1.02962436 [311] 0.26097958 0.37734863 0.37734863 0.37734863 -3.91383443 [316] -3.91383443 -4.83010896 -5.95986895 -5.19255314 -5.48289801 [321] -5.75739453 -5.97601144 -6.66182762 -6.66182762 -6.66182762 [326] -6.66182762 0.85654294 1.40756196 1.42091353 1.75098541 [331] 1.70099604 0.36770724 0.36770724 0.36770724 -2.45797839 [336] -4.68796604 -0.15466872 1.28853330 1.13576862 -3.76410820 [341] -3.76410820 -3.10630358 -2.59559188 7.33294138 7.33294138 [346] 7.33294138 11.22149579 -1.52281441 -1.52281441 -3.03562606 [351] -10.91369445 -2.76479936 -1.19256650 2.62791562 2.62791562 [356] 2.05722940 1.17906406 6.65515907 8.81781989 1.73385389 [361] 6.87672159 7.91951116 13.40908202 22.50195129 14.05752619 [366] 14.05752619 14.05752619 -0.11486134 -7.87317821 -7.87317821 [371] -7.87317821 -7.87317821 -4.33495291 -4.44480930 -4.50106566 [376] -4.50106566 -5.63522262 -6.04704576 -5.99281782 -5.83061418 [381] -5.97009831 -6.64073318 -6.64073318 -6.64073318 -1.91295781 [386] 7.41720299 8.55732485 9.07174409 9.07174409 7.04207280 [391] 5.57161090 2.96332608 -1.41860573 5.38625086 5.38625086 [396] 5.38625086 5.38625086 -0.34616159 -2.32237995 -2.53788991 [401] -2.53788991 -4.69729280 -5.02254158 -3.34914919 0.65395304 [406] 0.58175998 -1.68974734 -1.68974734 -1.68974734 -1.68974734 [411] 1.87656429 1.87656429 2.42947180 3.48727010 4.43669239 [416] 4.43669239 4.43669239 4.43669239 2.31359569 2.31359569 [421] 1.67652622 -1.46168971 -4.31149202 -4.47980069 -4.47980069 [426] -4.47980069 -4.00379549 -2.23596232 -2.23596232 -2.23596232 [431] -2.23596232 -5.71696230 -4.61277255 -3.51831950 -1.97126044 [436] 6.49645158 7.56713001 8.02855949 8.02855949 5.27108335 [441] 5.27108335 5.27108335 5.27108335 0.75337618 0.45125672 [446] 0.45125672 -2.15887833 -6.19843463 -10.87665459 -13.32998300 [451] -13.32998300 -13.32998300 -7.56755078 -7.56755078 -7.56755078 [456] -7.56755078 -6.98445802 -6.98445802 -6.98445802 -6.98445802 [461] -5.23622942 -5.19729662 -5.16206873 -5.11557903 -8.45194576 [466] -9.38277267 -9.38277267 -9.38277267 -8.03506981 -1.59445951 [471] -1.59445951 -1.59445951 -1.59445951 -2.59817371 -2.59817371 [476] -2.59817371 -2.59817371 -6.88293997 -6.70643808 -6.61110762 [481] -6.49702187 -13.02360155 -13.02360155 -13.02360155 -13.02360155 [486] -9.37925217 -9.37925217 -9.37925217 -9.37925217 -5.42507141 [491] -3.19182554 -3.19182554 -3.19182554 -4.73546120 -8.68766234 [496] -7.46045133 [1] 55.35301 56.34860 57.56444 59.53978 61.18131 64.22419 67.16115 [8] 71.74580 75.08518 78.23662 80.44193 81.71347 82.06488 81.70163 [15] 80.24770 78.35176 76.38906 74.21998 72.75280 72.42444 74.83697 [22] 78.37604 83.52319 89.79020 94.65715 99.14612 103.22188 108.01321 [29] 111.50987 114.32735 115.83715 117.66566 118.79562 119.78231 120.41827 [36] 121.12987 121.79668 122.69819 123.60530 124.27469 125.47505 126.01060 [43] 126.65818 127.45813 128.36782 129.96157 131.48921 132.53224 134.03437 [50] 135.40433 135.88522 135.96524 136.53955 136.92090 137.56528 138.54627 [57] 139.44719 140.37377 140.96252 142.15012 143.22255 144.15021 145.04354 [64] 146.66418 148.65354 150.52452 153.03624 155.41476 157.93106 160.64930 [71] 163.30400 167.09165 170.75656 173.78118 176.92811 179.94937 181.61697 [78] 183.14036 184.68714 186.54716 188.43668 190.54051 193.30576 195.68360 [85] 197.99430 200.19609 202.60066 205.05880 207.59842 210.06862 211.98449 [92] 214.11271 216.31803 218.97285 221.29326 223.67345 226.01781 228.14882 [99] 230.69129 232.59293 235.10680 236.99288 238.96593 240.89607 242.95468 [106] 244.74993 247.19905 249.59678 251.89433 253.84796 255.35252 257.28501 [113] 258.96330 260.56647 262.29976 264.22820 265.89244 267.59904 269.04689 [120] 270.60643 271.67081 273.26962 274.52125 275.89784 277.23429 278.69871 [127] 280.04815 281.69586 282.99392 284.24816 285.39150 286.61202 288.07445 [134] 289.35181 290.64512 291.99170 293.25489 294.64350 295.78822 297.12844 [141] 298.72677 300.07230 301.13602 302.74255 303.74294 304.70816 305.64637 [148] 306.55335 307.43582 308.22848 309.27760 310.20494 311.06190 311.98042 [155] 312.98916 314.04294 315.05521 316.20327 317.20635 318.08123 318.95075 [162] 319.82336 320.59359 321.42472 322.20287 323.03701 323.81476 324.61265 [169] 325.38607 326.14879 326.87106 327.63479 328.32804 329.02971 329.73360 [176] 330.46549 331.08898 331.74508 332.37906 333.05081 333.61163 334.30662 [183] 334.97169 335.71206 336.42226 337.08275 337.71280 338.35621 338.97926 [190] 339.58912 340.20776 341.06125 341.73210 342.53991 343.41407 344.23976 [197] 345.26002 346.30902 347.36015 348.52357 349.80045 351.10275 352.50289 [204] 353.85421 355.33960 356.91019 358.38209 359.89202 361.86611 363.57418 [211] 365.51884 367.56702 369.50965 371.52679 373.53459 375.57379 377.46795 [218] 379.54894 381.22754 383.61620 385.54409 387.65451 389.17339 391.25348 [225] 392.97418 394.64697 396.51101 398.24066 399.93612 401.57716 403.12195 [232] 404.73474 406.18994 407.99068 409.48531 410.99553 412.58421 414.16160 [239] 415.84436 417.34199 418.88135 420.43488 421.76884 423.12259 424.27752 [246] 425.52274 426.33521 427.34687 428.25162 429.09821 429.85369 430.66908 [253] 431.39972 432.20458 432.92885 433.82521 434.58500 435.44269 436.41930 [260] 437.38710 438.34614 439.32349 440.05583 441.06992 442.00680 442.98692 [267] 443.91516 445.00035 445.98497 447.04674 448.01914 449.03938 449.99736 [274] 450.95956 451.93172 452.80275 453.87932 454.79657 455.69358 456.57899 [281] 457.46792 458.40802 459.25048 460.51127 461.29486 462.27958 463.07897 [288] 463.75895 464.32643 464.94195 465.56451 466.24206 466.87507 467.60883 [295] 468.29517 468.98685 469.69419 470.35950 470.94075 471.61850 472.27203 [302] 472.94393 473.60171 474.26432 475.03282 475.81739 476.68189 477.49559 [309] 478.49355 479.52322 480.66900 481.84724 483.06875 484.24605 485.48916 [316] 486.71950 487.67672 488.63571 489.45938 490.27310 491.04240 491.87331 [323] 492.58474 493.28222 494.04601 494.82691 495.59547 496.36718 497.14760 [330] 497.93750 498.78185 499.68562 500.49084 501.48408 502.20657 503.02767 [337] 503.84390 504.70128 505.53028 506.39632 507.26595 508.04657 508.84714 [344] 509.71657 510.62376 511.47342 512.14977 513.29920 514.21841 515.25979 [351] 516.42175 517.58704 518.71888 519.79952 520.86528 521.98127 522.97538 [358] 524.07493 525.21439 526.48838 527.50453 528.57742 529.71513 530.78575 [365] 531.84081 532.95403 534.04698 535.16497 536.09080 537.18237 538.13698 [372] 539.35646 540.42766 541.61564 542.51094 543.67027 544.68078 545.81968 [379] 546.85622 547.81833 548.88652 549.90222 550.85484 552.13873 553.17604 [386] 554.21481 555.25684 556.29118 557.33108 558.38554 559.36107 560.40940 [393] 561.34890 562.29885 563.34398 564.27091 565.37709 566.40066 567.36033 [400] 568.44539 569.32579 570.29502 571.35465 572.31880 573.16152 574.02443 [407] 574.67892 575.27723 575.94960 576.44265 577.07095 577.67321 578.33062 [414] 578.95541 579.60404 580.23124 580.88569 581.74701 582.39060 583.13650 [421] 583.91537 584.60858 585.22485 585.78661 586.28420 586.77157 587.17667 [428] 587.70752 588.15521 588.65738 589.13796 589.60226 590.10989 590.61206 [435] 591.17316 591.60734 591.99566 592.49956 592.82186 593.36715 593.79590 [442] 594.22844 594.64748 595.07809 595.51362 595.95635 596.43495 596.88059 [449] 597.30308 597.71876 598.07892 598.48861 598.85873 599.25152 599.57654 [456] 599.85784 600.13553 600.55145 600.91644 601.31141 601.64632 601.98706 [463] 602.29537 602.70224 603.00958 603.33748 603.66828 603.98763 604.24596 [470] 604.47789 604.81055 605.05749 605.27543 605.58842 605.85190 606.25381 [477] 606.61743 607.12237 607.52753 607.74636 608.00825 608.30644 608.51038 [484] 608.73585 609.10416 609.41595 609.81541 610.24125 610.67809 611.18142 [491] 611.51914 611.87100 612.18136 612.46219 612.68499 612.95659 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 29 O2 values from manual exclude period 298.633903 to 298.634731" [1] "Not reporting 29 APO values from manual exclude period 298.633903 to 298.634731" [1] "Not reporting 10 O2 values from manual exclude period 298.635283 to 298.635559" [1] "Not reporting 10 APO values from manual exclude period 298.635283 to 298.635559" [1] "Not reporting 20 O2 values from manual exclude period 298.798866 to 298.799417" [1] "Not reporting 20 APO values from manual exclude period 298.798866 to 298.799417" [1] "Not reporting 30 O2 values from manual exclude period 298.930725 to 298.931553" [1] "Not reporting 30 APO values from manual exclude period 298.930725 to 298.931553" [1] "Not reporting 38 O2 values from manual exclude period 298.947552 to 298.948656" [1] "Not reporting 38 APO values from manual exclude period 298.947552 to 298.948656" [1] "Not reporting 72 smoothed O2 values from manual exclude period 298.633241292217 to 298.634077106935" [1] "Not reporting 72 smoothed APO values from manual exclude period 298.633241292217 to 298.634077106935" [1] "Not reporting 24 smoothed O2 values from manual exclude period 298.634620851805 to 298.634903820618" [1] "Not reporting 24 smoothed APO values from manual exclude period 298.634620851805 to 298.634903820618" [1] "Not reporting 48 smoothed O2 values from manual exclude period 298.798189826772 to 298.798742727978" [1] "Not reporting 48 smoothed APO values from manual exclude period 298.798189826772 to 298.798742727978" [1] "Not reporting 73 smoothed O2 values from manual exclude period 298.930068591311 to 298.930905781715" [1] "Not reporting 73 smoothed APO values from manual exclude period 298.930068591311 to 298.930905781715" [1] "Not reporting 93 smoothed O2 values from manual exclude period 298.946942627865 to 298.948016056181" [1] "Not reporting 93 smoothed APO values from manual exclude period 298.946942627865 to 298.948016056181" [1] "Not reporting 72 smoothed O2 values from manual exclude period 298.633241292217 to 298.634077106935" [1] "Not reporting 72 smoothed APO values from manual exclude period 298.633241292217 to 298.634077106935" [1] "Not reporting 24 smoothed O2 values from manual exclude period 298.634620851805 to 298.634903820618" [1] "Not reporting 24 smoothed APO values from manual exclude period 298.634620851805 to 298.634903820618" [1] "Not reporting 48 smoothed O2 values from manual exclude period 298.798189826772 to 298.798742727978" [1] "Not reporting 48 smoothed APO values from manual exclude period 298.798189826772 to 298.798742727978" [1] "Not reporting 73 smoothed O2 values from manual exclude period 298.930068591311 to 298.930905781715" [1] "Not reporting 73 smoothed APO values from manual exclude period 298.930068591311 to 298.930905781715" [1] "Not reporting 93 smoothed O2 values from manual exclude period 298.946942627865 to 298.948016056181" [1] "Not reporting 93 smoothed APO values from manual exclude period 298.946942627865 to 298.948016056181" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171025_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 137836 items [1] 12 3446 34459 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33767 [1] "Average Date / Time for slice RF12 = 2017-10-25 18:50:27.7926785945892" [1] "sum(lsel) = 2759" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 7.373 820.897 [1] 7.373 820.897 [1] 179.103 992.627 [1] 2.220446e-16 9.999990e+05 [1] "highestmid = 724.997" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF12 APO_AO2 range = -348.95,-323.6" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171025_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 137836 items [1] 12 3446 34459 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33777 [1] "Average Date / Time for slice RF12 = 2017-10-25 18:50:27.7926785945892" [1] "sum(lsel) = 2759" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 7.373 820.897 [1] 7.373 820.897 [1] 179.103 992.627 [1] 2.220446e-16 9.999990e+05 [1] "highestmid = 724.997" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF12 O2_AO2 range = -648.82,-611.1" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171025_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 137836 items [1] 12 3446 34459 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 34274 [1] "Average Date / Time for slice RF12 = 2017-10-25 18:50:06.49318027496338" [1] "sum(lsel) = 2786" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 7.373 820.897 [1] 7.373 820.897 [1] 179.103 992.627 [1] 2.220446e-16 9.999990e+05 [1] "highestmid = 724.997" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF12 CO2_AO2 range = 403.62,410.7" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "making html" [1] "making index html"