[1] "2025-05-13 16:35:49 MDT" options [1,] "file" "171023a" [2,] "flight" "RF11" [3,] "project" "ATOM3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "17" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "171023a" [1] "Reading in flight and plotting intervals" Read 35 records [1] "Reading in /scr/raf/stephens/AO2DAT/171023a.mr" Read 16821 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.36 seconds" [1] "New JOGEST = 2.36 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/171023a.hr" Read 67286 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 04:35:49 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30767 description: HS CO2 = 378.73 O2 = -552.5" [1] "position 2 cylinder OK30768 description: LS CO2 = 408.78 O2 = -698" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -583.5" [1] "position 4 cylinder OK30770 description: WT CO2 = 398.49 O2 = -708.1" [1] "position 5 cylinder OK30771 description: LP CO2 = 391.32 O2 = -449.7" [1] 378.7296 408.7750 393.4137 398.4902 391.3153 [1] -552.5117 -697.9580 -583.5341 -708.1126 -449.6622 [1] "Nominal linear calibrations:" [1] "co2scl = 1.055 co2off = 5.1 o2scla = -0.054 o2offa = -122" [1] "(dV/V)/(dXO2/XO2) = -3.893" [1] "(dV/V)/d(O2/N2) = -3.078" [1] "Reading in very high resolution timeseries" Read 336420 records [1] 336420 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:35:50 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:35:52 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.078" [1] "o2scaleavenew_drelVdrelP = -3.893" [1] "median(o2scalenew) = -3.099" [1] "Empirical dV/V vs dP/P relationship =-4.143, r^2 =0.526, damping =1.064" [1] "Tue May 13 04:35:52 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1582 $icochar [1] "0" "0" "19:00:16" "09:22:13" "296.397243" [6] "12:41:30" "296.397243" "296.419993" "296.433563" "296.454717" [11] "296.469484" "296.497024" "296.510993" "296.529353" "296.542524" [16] "296.556493" "296.570862" "296.592814" "296.618357" "296.640708" [21] "296.661862" "296.687007" "296.720134" "296.749669" "296.773616" [26] "296.401582" "296.415374" "296.417856" "296.461715" "296.484609" [31] "296.528744" "296.588049" "296.674387" "296.691489" "296.721555" $ecochar [1] "367" "09:22:13" "367" "296.397243" "19:00:16" [6] "12:42:30" "296.419993" "296.433563" "296.454717" "296.471081" [11] "296.497024" "296.512989" "296.529353" "296.544520" "296.556493" [16] "296.574055" "296.592814" "296.618357" "296.642704" "296.661862" [21] "296.689801" "296.720134" "296.752064" "296.773616" "296.791976" [26] "296.402409" "296.416477" "296.418132" "296.462266" "296.485437" [31] "296.529571" "296.589428" "296.675214" "296.692316" "296.722659" $flag [1] "all" "LP" "LP" "preTOspike" [5] "flight" "breath" "a" "b" [9] "c" "d" "e" "f" [13] "g" "h" "i" "j" [17] "k" "l" "m" "n" [21] "o" "p" "q" "r" [25] "s" "donotreporto2" "donotreporto2" "donotreporto2" [29] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [33] "donotreporto2" "donotreporto2" "donotreporto2" $ico2 [1] 0.0000 0.0000 296.7919 296.3904 296.3972 296.5288 296.3972 296.4200 [9] 296.4336 296.4547 296.4695 296.4970 296.5110 296.5294 296.5425 296.5565 [17] 296.5709 296.5928 296.6184 296.6407 296.6619 296.6870 296.7201 296.7497 [25] 296.7736 296.4016 296.4154 296.4179 296.4617 296.4846 296.5287 296.5880 [33] 296.6744 296.6915 296.7216 $eco2 [1] 367.0000 296.3904 367.0000 296.3972 296.7919 296.5295 296.4200 296.4336 [9] 296.4547 296.4711 296.4970 296.5130 296.5294 296.5445 296.5565 296.5741 [17] 296.5928 296.6184 296.6427 296.6619 296.6898 296.7201 296.7521 296.7736 [25] 296.7920 296.4024 296.4165 296.4181 296.4623 296.4854 296.5296 296.5894 [33] 296.6752 296.6923 296.7227 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1581 1581 296.3904 8.029233 -0.00133700 -0.00062855 -0.00062855 1581 1582 1582 296.3904 8.035886 -0.00101705 -0.00063240 -0.00063240 1582 1583 1583 296.3905 8.028559 -0.00105825 -0.00055935 -0.00055935 1583 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1581 10.5 6.00 16.00 4910.50 -1 8.029546 8.028986 1582 10.5 2.25 16.75 1236.75 1 8.036057 8.035631 1583 10.5 1.00 17.00 25.50 -1 8.028779 8.028336 vuvsigpdprcorr 1581 8.029249 1582 8.035896 1583 8.028570 [1] 0.3904058 0.3904334 0.3904608 [,1] [,2] [,3] [1,] 0.390417 -1 6 [2,] 0.390428 1 6 [3,] 0.390433 1 1 [4,] 0.390439 1 1 [5,] 0.390445 1 1 [6,] 0.390455 -1 1 [7,] 0.390461 -1 1 [8,] 0.390466 -1 1 [9,] 0.390472 -1 1 [10,] 0.390482 1 1 [11,] 0.390488 1 1 [12,] 0.390493 1 1 [13,] 0.390499 1 1 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1582 $icochar [1] "0" "0" "19:00:16" "09:22:13" "296.397243" [6] "12:41:30" "296.397243" "296.419993" "296.433563" "296.454717" [11] "296.469484" "296.497024" "296.510993" "296.529353" "296.542524" [16] "296.556493" "296.570862" "296.592814" "296.618357" "296.640708" [21] "296.661862" "296.687007" "296.720134" "296.749669" "296.773616" [26] "296.401582" "296.415374" "296.417856" "296.461715" "296.484609" [31] "296.528744" "296.588049" "296.674387" "296.691489" "296.721555" $ecochar [1] "367" "09:22:13" "367" "296.397243" "19:00:16" [6] "12:42:30" "296.419993" "296.433563" "296.454717" "296.471081" [11] "296.497024" "296.512989" "296.529353" "296.544520" "296.556493" [16] "296.574055" "296.592814" "296.618357" "296.642704" "296.661862" [21] "296.689801" "296.720134" "296.752064" "296.773616" "296.791976" [26] "296.402409" "296.416477" "296.418132" "296.462266" "296.485437" [31] "296.529571" "296.589428" "296.675214" "296.692316" "296.722659" $flag [1] "all" "LP" "LP" "preTOspike" [5] "flight" "breath" "a" "b" [9] "c" "d" "e" "f" [13] "g" "h" "i" "j" [17] "k" "l" "m" "n" [21] "o" "p" "q" "r" [25] "s" "donotreporto2" "donotreporto2" "donotreporto2" [29] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [33] "donotreporto2" "donotreporto2" "donotreporto2" $ico2 [1] 0.0000 0.0000 296.7919 296.3904 296.3972 296.5288 296.3972 296.4200 [9] 296.4336 296.4547 296.4695 296.4970 296.5110 296.5294 296.5425 296.5565 [17] 296.5709 296.5928 296.6184 296.6407 296.6619 296.6870 296.7201 296.7497 [25] 296.7736 296.4016 296.4154 296.4179 296.4617 296.4846 296.5287 296.5880 [33] 296.6744 296.6915 296.7216 $eco2 [1] 367.0000 296.3904 367.0000 296.3972 296.7919 296.5295 296.4200 296.4336 [9] 296.4547 296.4711 296.4970 296.5130 296.5294 296.5445 296.5565 296.5741 [17] 296.5928 296.6184 296.6427 296.6619 296.6898 296.7201 296.7521 296.7736 [25] 296.7920 296.4024 296.4165 296.4181 296.4623 296.4854 296.5296 296.5894 [33] 296.6752 296.6923 296.7227 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1581 1581 296.3904 8.029233 -0.00133700 -0.00062855 -0.00062855 1581 1582 1582 296.3904 8.035886 -0.00101705 -0.00063240 -0.00063240 1582 1583 1583 296.3905 8.028559 -0.00105825 -0.00055935 -0.00055935 1583 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1581 10.5 6.00 16.00 4910.50 -1 8.029546 8.028986 1582 10.5 2.25 16.75 1236.75 1 8.036057 8.035631 1583 10.5 1.00 17.00 25.50 -1 8.028779 8.028336 vuvsigpdprcorr 1581 8.029249 1582 8.035896 1583 8.028570 [1] 0.3904058 0.3904334 0.3904608 [,1] [,2] [,3] [1,] 0.390417 -1 6 [2,] 0.390428 1 6 [3,] 0.390433 1 1 [4,] 0.390439 1 1 [5,] 0.390445 1 1 [6,] 0.390455 -1 1 [7,] 0.390461 -1 1 [8,] 0.390466 -1 1 [9,] 0.390472 -1 1 [10,] 0.390482 1 1 [11,] 0.390488 1 1 [12,] 0.390493 1 1 [13,] 0.390499 1 1 [1] "JOGAVES DOES NOT MATCH" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:36:44 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 04:36:44 PM MDT 2025 done recreating mr o2diffs" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 147.286 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 61.946 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 47.466 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -36.314 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 12 [1] 32 [1] 89 [1] 89 [1] 89 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 5 296.3475 -986.512282 1023986.8 -1 [2,] 6 296.3475 -763.044436 1024996.4 1 [3,] 7 296.3475 -466.668340 1024557.4 -1 [4,] 9 296.3476 -28.808348 1024965.8 -1 [5,] 71 296.3493 25.950767 1025050.9 -1 [6,] 72 296.3493 -216.659601 1025027.2 1 [7,] 73 296.3493 -467.568825 1024543.1 -1 [8,] 135 296.3510 -272.695230 1024865.6 -1 [9,] 137 296.3511 -37.136470 1025070.5 -1 [10,] 203 296.3529 -343.696878 1024889.9 -1 [11,] 267 296.3547 -751.539336 1024385.2 -1 [12,] 385 296.3579 -915.377574 1023555.3 -1 [13,] 386 296.3579 -704.944277 1024483.5 1 [14,] 387 296.3579 -431.129158 1024088.0 -1 [15,] 389 296.3580 -81.836798 1024409.9 -1 [16,] 451 296.3597 -475.824358 1023773.1 -1 [17,] 513 296.3614 -754.378202 1023580.2 -1 [18,] 767 296.3683 -726.866997 1024040.3 -1 [19,] 831 296.3701 -76.007723 1024578.7 -1 [20,] 955 296.3735 -105.493705 1023890.6 -1 [21,] 956 296.3735 -461.977623 1024026.9 1 [22,] 957 296.3735 -805.595909 1023199.9 -1 [23,] 1153 296.3787 -444.207050 1022513.6 -1 [24,] 1155 296.3788 -65.429744 1022865.7 -1 [25,] 1217 296.3805 -468.152835 1022446.4 -1 [26,] 1343 296.3839 -824.394710 1021750.2 -1 [27,] 1707 296.3939 245.692425 1012050.7 -1 [28,] 1708 296.3939 592.725621 1011704.5 1 [29,] 1709 296.3939 966.404088 1012660.1 -1 [30,] 1713 296.3940 1552.466177 1012965.3 -1 [31,] 1714 296.3940 1321.088405 1011342.9 1 [32,] 1715 296.3941 1055.665479 1012360.2 -1 [33,] 1716 296.3941 801.677839 1011262.0 1 [34,] 1717 296.3941 531.541310 1011756.5 -1 [35,] 2315 296.4105 -273.912080 993683.3 -1 [36,] 2321 296.4107 -527.960642 993293.5 -1 [37,] 2383 296.4124 -100.410007 992249.5 -1 [38,] 3587 296.4453 -264.314376 967674.2 -1 [39,] 3593 296.4455 -32.147214 967914.3 -1 [40,] 3655 296.4472 -437.508047 967514.1 -1 [41,] 4661 296.4747 -275.619555 963165.6 -1 [42,] 4729 296.4766 -129.993884 964266.1 -1 [43,] 5355 296.4937 -238.761209 972037.4 -1 [44,] 5361 296.4939 -475.197434 971810.7 -1 [45,] 5425 296.4956 -88.902039 972046.6 -1 [46,] 5489 296.4974 -331.317715 971132.1 -1 [47,] 6387 296.5219 -212.650937 985530.5 -1 [48,] 6393 296.5221 -460.176678 985350.2 -1 [49,] 6457 296.5239 -24.680521 986319.4 -1 [50,] 6652 296.5292 -94.572105 985266.1 1 [51,] 6653 296.5292 -131.375956 985289.5 -1 [52,] 6654 296.5292 -257.786935 985470.1 1 [53,] 7537 296.5535 -246.445166 998731.9 -1 [54,] 7607 296.5554 -417.871216 998393.0 -1 [55,] 8551 296.5812 -216.681279 1001305.8 -1 [56,] 8557 296.5814 -512.621758 1001034.4 -1 [57,] 8621 296.5831 -13.612338 1001540.5 -1 [58,] 8683 296.5848 -144.542535 1000921.8 -1 [59,] 8685 296.5849 -356.674775 1000703.6 -1 [60,] 9775 296.6147 -160.850850 994842.8 -1 [61,] 9845 296.6166 -483.781952 996072.7 -1 [62,] 10296 296.6290 -143.059427 1007843.3 1 [63,] 10297 296.6290 -219.064770 1007785.5 -1 [64,] 10298 296.6290 -290.837015 1008090.1 1 [65,] 11195 296.6535 -201.675149 1016194.3 -1 [66,] 11201 296.6537 -491.521441 1015819.2 -1 [67,] 11263 296.6554 -81.982830 1015372.4 -1 [68,] 12078 296.6777 -135.313296 1002518.4 1 [69,] 12079 296.6777 -192.565372 1002543.6 -1 [70,] 12080 296.6777 -292.366319 1002828.9 1 [71,] 12592 296.6917 -153.529652 1007186.0 1 [72,] 12593 296.6918 -231.317457 1007114.0 -1 [73,] 12594 296.6918 -332.483893 1007418.1 1 [74,] 12711 296.6950 -189.271881 1006212.1 -1 [75,] 12779 296.6969 -189.950930 1006345.0 -1 [76,] 12781 296.6969 -481.238292 1006095.2 -1 [77,] 13491 296.7163 -216.897329 1000852.6 -1 [78,] 13497 296.7165 -456.474427 1000589.9 -1 [79,] 13559 296.7182 -220.767614 1001190.5 -1 [80,] 13561 296.7182 13.200914 1001419.3 -1 [81,] 15143 296.7615 -165.802836 1009791.4 -1 [82,] 15211 296.7634 -197.721612 1008906.0 -1 [83,] 15213 296.7634 -460.317963 1008652.1 -1 [84,] 16253 296.7919 -49.712188 998874.3 -1 [85,] 16571 296.8006 -536.231178 1009232.9 -1 [86,] 16633 296.8023 -174.781780 1011964.4 -1 [87,] 16635 296.8023 -1.878377 1012200.7 -1 [88,] 16697 296.8040 -336.212517 1014400.5 -1 [89,] 16759 296.8057 -142.863617 1017001.7 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 628 296.3645 9.062500e+24 [2,] 957 296.3735 9.108225e+04 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 147.286 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 61.946 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -46.621 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -36.314 PER MEG" [1] 378.7296 408.7750 393.4137 398.4902 391.3153 [1] -552.5117 -697.9580 -583.5341 -708.1126 -449.6622 [1] "Nominal linear calibrations:" [1] "co2scl = 1.055 co2off = 5.1 o2scla = -0.054 o2offa = -122.5" [1] "(dV/V)/(dXO2/XO2) = -3.9" [1] "(dV/V)/d(O2/N2) = -3.083" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.4 minutes" [1] "Shortest Cal: 0.16 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 1 calibration period(s) with less than 30 seconds of data" [1] "at: 59" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-1HZ_DC8_20171023_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 611694 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-20Hz_DC8_20171023_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 17688320 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.0013" [1] "HS CO2 vs. PACAB: m = -0.000666, r^2 = 0.02" [1] "LS CO2 vs. PACAB: m = -0.00193, r^2 = 0.17" [1] "HS+LS LIH2O vs. PACAB: m = -3.57e-05" [1] "HS LIH2O vs. PACAB: m = -4.26e-05, r^2 = 0.43" [1] "LS LIH2O vs. PACAB: m = -2.88e-05, r^2 = 0.2" [1] "HS+LS CO2 vs. LIH2O: m = -3.82" [1] "HS CO2 vs. LIH2O: m = -27.1, r^2 = 0.13" [1] "LS CO2 vs. LIH2O: m = 19.4, r^2 = 0.1" [1] "APCO2 vs. PACAB: m = 0.00674, r^2 = 0.05" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.106" [1] "HS O2 vs. PACAB: m = -0.0844, r^2 = 0.73" [1] "LS O2 vs. PACAB: m = -0.127, r^2 = 0.76" [1] "HS+LS O2 vs. LIH2O: m = 576" [1] "HS O2 vs. LIH2O: m = 519, r^2 = 0.11" [1] "LS O2 vs. LIH2O: m = 633, r^2 = 0.14" [1] "HS+LS O2 vs. PAO2: m = -7.93" [1] "HS O2 vs. PAO2: m = -7.86, r^2 = 0.27" [1] "LS O2 vs. PAO2: m = -8, r^2 = 0.18" [1] "HS+LS O2 vs. TPBOX: m = -4.12" [1] "HS O2 vs. TPBOX: m = -1.64, r^2 = 0.08" [1] "LS O2 vs. TPBOX: m = -6.6, r^2 = 0.48" [1] "APO vs. PACAB: m = -0.115, r^2 = 0.05" [1] "APO vs. PAO2: m = -3.78, r^2 = 0.01" [1] "APO vs. TPBOX: m = 1.2, r^2 = 0.01" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.0151, r^2 = 0" [1] "LS CO2 vs. LiCor Cell P: m = -0.0152, r^2 = 0" [1] "HS CO2 vs. CO2 Vol P: m = 0.449, r^2 = 0.17" [1] "LS CO2 vs. CO2 Vol P: m = 0.601, r^2 = 0.36" [1] "HS CO2 vs. SLOPE: m = 0.183, r^2 = 0.02" [1] "LS CO2 vs. SLOPE: m = 0.67, r^2 = 0.15" [1] "HS O2 vs. O2 Vol P: m = -7.14, r^2 = 0.21" [1] "LS O2 vs. O2 Vol P: m = -4.52, r^2 = 0.03" [1] "HS O2 vs. O2 Cell T: m = 4.19, r^2 = 0.3" [1] "LS O2 vs. O2 Cell T: m = 3.96, r^2 = 0.08" [1] "HS O2 vs. CO2 Vol P: m = 1.63, r^2 = 0.01" [1] "LS O2 vs. CO2 Vol P: m = 11.4, r^2 = 0.11" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.00783, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 2.58, r^2 = 0.14" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = 1.63, r^2 = 0.01" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 11.4, r^2 = 0.11" [1] "HS O2 vs. LIH2O: m = 146, r^2 = 0.03" [1] "LS O2 vs. LIH2O: m = 335, r^2 = 0.06" [1] "HS O2 vs. SLOPE: m = -0.199, r^2 = 0.03" [1] "LS O2 vs. SLOPE: m = 1.02, r^2 = 0.27" [1] "HS CO2 vs. Time: m = 13.451, r^2 = 0.89" [1] "LS CO2 vs. Time: m = 13.744, r^2 = 0.89" [1] "HS CO2 vs. Cylinder T: m = 0.354, r^2 = 0.01" [1] "LS CO2 vs. Cylinder T: m = 0.822, r^2 = 0.062" [1] "HS CO2 vs. Regulator T: m = -0.215, r^2 = 0.12" [1] "LS CO2 vs. Regulator T: m = -0.21, r^2 = 0.143" [1] "HS CO2 vs. Ref. Volumes T: m = -0.046, r^2 = 0.01" [1] "LS CO2 vs. Ref. Volumes T: m = -0.023, r^2 = 0.002" [1] "HS CO2 vs. Manifold T: m = -0.151, r^2 = 0.15" [1] "LS CO2 vs. Manifold T: m = -0.25, r^2 = 0.357" [1] "HS CO2 vs. Pump Box T: m = -0.114, r^2 = 0.15" [1] "LS CO2 vs. Pump Box T: m = -0.184, r^2 = 0.408" [1] "HS O2 vs. Cylinder T: m = 32.688, r^2 = 0.2" [1] "LS O2 vs. Cylinder T: m = 61.884, r^2 = 0.295" [1] "HS O2 vs. Regulator T: m = 6.006, r^2 = 0.26" [1] "LS O2 vs. Regulator T: m = 5.896, r^2 = 0.095" [1] "HS O2 vs. Ref. Volumes T: m = 7.723, r^2 = 0.41" [1] "LS O2 vs. Ref. Volumes T: m = 10.971, r^2 = 0.303" [1] "HS O2 vs. Manifold T: m = 0.976, r^2 = 0.02" [1] "LS O2 vs. Manifold T: m = -5.016, r^2 = 0.121" [1] "HS O2 vs. Pump Box T: m = -1.025, r^2 = 0.03" [1] "LS O2 vs. Pump Box T: m = -6.527, r^2 = 0.429" [1] "HS CO2 vs. WT P: m = -0.001, r^2 = 0.09" [1] "LS CO2 vs. WT P: m = -0.002, r^2 = 0.29" [1] "HS CO2 vs. SP P: m = -0.0012, r^2 = 0.07" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.104, r^2 = 0.25" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.105, r^2 = 0.25" [1] "LS CO2 vs. SP P: m = -0.00207, r^2 = 0.24" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.014, r^2 = 0.24" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.016, r^2 = 0.24" [1] "HS CO2 vs. WT FL: m = 0.015, r^2 = 0" [1] "LS CO2 vs. WT FL: m = 0.009, r^2 = 0.001" [1] "HS CO2 vs. SP FL: m = 0.033, r^2 = 0.11" [1] "LS CO2 vs. SP FL: m = 0.045, r^2 = 0.256" [1] "HS O2 vs. SLPDIFF: m = 0.008, r^2 = 0" [1] "LS O2 vs. SLPDIFF: m = 0.309, r^2 = 0.005" [1] "HS O2 vs. WT P: m = -0.074, r^2 = 0.68" [1] "LS O2 vs. WT P: m = -0.127, r^2 = 0.8" [1] "HS O2 vs. SP P: m = -0.08, r^2 = 0.66" [1] "LS O2 vs. SP P: m = -0.139, r^2 = 0.825" [1] "HS O2 vs. WT FL: m = 5.717, r^2 = 0.66" [1] "LS O2 vs. WT FL: m = 8.592, r^2 = 0.643" [1] "HS O2 vs. SP FL: m = 1.579, r^2 = 0.65" [1] "LS O2 vs. SP FL: m = 2.839, r^2 = 0.867" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 50.18, 50.9" [1] "Empirical LP O2 lag flow(s): 100.4, 100.2" [1] "Empirical LP CO2 lag time(s): 45.51, 43.82" [1] "Empirical LP CO2 lag flow(s): 100.4, 100.2" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.4" [1] "Median all HS CO2 SD = 0.42" [1] "Median all LS CO2 SD = 0.4" [1] "Median all LT CO2 SD = 0.39" [1] "Median all WT CO2 SD = 0.37" [1] "Median all HS or LS CO2 SD = 0.41" [1] "Median all cal O2 SD = 1.69" [1] "Median all HS O2 SD = 1.54" [1] "Median all LS O2 SD = 1.64" [1] "Median all LT O2 SD = 1.64" [1] "Median all WT O2 SD = 1.42" [1] "Median all HS or LS O2 SD = 1.64" [1] "Median all cal CO2 Slope = 0.03" [1] "Median all HS CO2 Slope = 0.03" [1] "Median all LS CO2 Slope = 0.03" [1] "Median all LT CO2 Slope = 0.07" [1] "Median all WT CO2 Slope = 0.07" [1] "Median all HS or LS CO2 Slope = 0.03" [1] "Median all cal O2 Slope = -0.31" [1] "Median all HS O2 Slope = -0.43" [1] "Median all LS O2 Slope = -0.34" [1] "Median all LT O2 Slope = -0.54" [1] "Median all WT O2 Slope = -0.33" [1] "Median all HS or LS O2 Slope = -0.38" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 6.56 per meg" [1] "Initial O2 Calibration Offset = 7.02 per meg" [1] "SD of O2 Calibration (post-takeoff) = 6.4 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 7.5 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 3.99 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 30011.73 69753.74" [1] "Time lag adjustments = 17 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 61.6 at 102.4 sccm" [1] "Median O2 delay + tlagff = 62.3 at 102.4 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 59.7 at 102.4 sccm" [1] "Median O2 delay from 3-way + tlagff = 60.4 at 102.4 sccm" [1] "after calc and ff lag: 29946.86 69687.2" [1] "2025-05-13 16:37:44 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 3.7621170 3.7830960 1.6882372 -3.1851276 -8.5630849 -8.5630849 [7] -4.1290522 -4.1290522 -4.1290522 0.8386532 2.8819799 1.5486454 [13] 1.5486454 1.5486454 -0.7955096 -9.8162436 -12.4316111 -12.4316111 [19] -12.4316111 -6.3783520 -4.6361349 -4.6361349 -4.7227012 -6.7934979 [25] -7.0488600 -7.0488600 -7.2471089 3.9039746 3.9039746 3.2337055 [31] 1.9650044 -6.3171010 -6.1712953 -5.7952125 -5.7538736 -0.9926756 [37] 1.3312740 1.3312740 2.2955091 5.4707220 6.3865521 -0.7175099 [43] -1.6546865 -0.4120848 -5.6182626 -5.6182626 -4.6630382 -1.8294020 [49] -2.3646280 -2.3646280 -2.3646280 -6.8751312 -20.1342832 -20.1342832 [55] -18.8123801 -16.0553787 -1.1589285 -1.1589285 -2.8167017 -3.3442599 [61] -2.4075919 -1.1130221 -3.3663684 -4.1013596 -4.1028681 -10.3452175 [67] -10.1876093 -9.2860021 -9.2842578 -6.6945326 -5.6770141 -4.5999157 [73] -3.5779058 -4.6084328 -2.1290947 -1.6123675 -1.6123675 5.8450323 [79] 5.8450323 5.8450323 5.8450323 1.3964053 -10.9139284 -14.5405405 [85] -14.5405405 -14.5405405 -28.4501209 -28.4501209 -28.4501209 -28.4501209 [91] -55.4490589 -52.3125255 -49.8158443 -48.1200420 -18.4629766 -10.2729556 [97] -10.2729556 -10.2729556 -9.3936598 -5.4271938 -6.0308209 -9.0432519 [103] -12.2797017 -9.6292980 -9.6292980 -9.6292980 -9.6292980 -2.5691477 [109] -2.5691477 -2.5899009 -3.5844036 -11.2758507 -11.6294278 -11.6294278 [115] -11.6294278 -19.4922259 -20.5940367 -18.3450140 -18.3450140 -17.2889340 [121] -9.0445818 -7.1368600 -7.1368600 -7.1368600 -3.9747880 -3.9896564 [127] -3.9896564 -5.5093217 -15.8335470 -15.8335470 -13.6443869 -9.5732782 [133] -3.9227491 -3.9227491 -6.1210321 -8.3102113 -3.8410680 -6.6240799 [139] -7.1143755 -7.1143755 -7.1018386 -7.0877845 -14.7859289 -17.3599772 [145] -17.3599772 -17.3599772 -16.3815645 -13.0490286 -13.3312373 -13.4585460 [151] -13.4585460 -11.4390782 -11.4390782 -11.4390782 -11.4390782 -11.9292170 [157] -15.1947617 -15.2987408 -15.2987408 -18.1148524 -18.1148524 -18.1148524 [163] -18.5934379 -20.8996013 -22.5036634 -22.5036634 -22.5036634 -22.5036634 [169] -18.4553341 -18.4553341 -18.0867857 -16.1137167 -23.9065400 -22.9879495 [175] -22.9879495 -22.9879495 -16.2088853 -15.5996882 -15.1121779 -13.4992557 [181] -11.4499032 -8.3727165 -8.3727165 -8.3727165 -8.6078759 -10.2236356 [187] -9.9299429 -9.9191084 -9.9191084 -10.3482690 -10.3482690 -12.4024183 [193] -15.1322437 -10.4891389 -10.5468782 -10.5468782 -10.5468782 -10.0666076 [199] -10.0271127 -9.8056253 -9.4155597 -17.4181290 -19.3487434 -19.3487434 [205] -17.6692049 -12.0980770 -9.0708323 -9.0708323 -7.4931610 -6.1379870 [211] -3.8764186 -4.5520715 -7.4917433 -7.6418992 -16.3973637 -14.9886968 [217] -11.5894905 -11.5894905 -18.2832171 -19.8851952 -20.4823294 -20.4823294 [223] -15.5075910 -12.5722228 -12.5722228 -12.5407927 -11.9769918 -15.1014685 [229] -15.1014685 -14.3249258 -13.3644689 0.2927571 0.5970658 0.5970658 [235] 0.5970658 -5.0113825 -5.0113825 -5.0788676 -5.4022566 -4.0441319 [241] -4.0441319 -4.0441319 -4.0441319 -3.5958427 -3.4544534 -5.5462408 [247] -7.5746993 -9.1469171 -11.9791508 -11.9791508 -11.9791508 -11.9791508 [253] -21.4944358 -21.4944358 -21.4944358 -21.4944358 -5.9898253 -5.2986001 [259] -4.4304270 -3.3563575 -4.8263381 -4.1393434 -3.5786190 -3.2614646 [265] -2.3673458 -0.5864552 -0.5864552 -0.5864552 -0.5864552 -1.6474742 [271] -1.6474742 -1.6474742 -1.6474742 -2.2614655 -1.9934374 -1.7848535 [277] -1.7848535 -4.0570815 -4.3202399 -4.3202399 -4.3202399 -5.2594545 [283] -5.7310309 -5.6371822 -5.4192087 -4.9183161 -1.1577018 -1.1577018 [289] -1.1577018 -1.1577018 -1.2973511 -2.2732388 -4.1331810 -5.7625920 [295] -19.0510117 -19.0510117 -19.0510117 -19.0510117 -15.0799896 -9.5915062 [301] -7.2068635 -3.7820585 -2.8484884 -3.3279715 -3.3279715 -3.3279715 [307] -2.4365279 4.4486971 4.2798562 3.3991448 1.8337963 -11.7376779 [313] -11.7376779 -11.7376779 -11.7376779 -7.0802607 -7.0802607 -7.3687657 [319] -8.0066329 -11.2395902 -12.6495581 -12.6495581 -12.6495581 -11.5893038 [325] -7.3141493 -7.3141493 -7.3995572 -7.4859805 -3.2639903 -3.2639903 [331] -3.2639903 -3.2639903 -3.4068490 -3.2570427 -2.9112883 -2.6747465 [337] -5.6064202 -5.5542564 -5.5542564 -5.5542564 -7.2189302 -10.5810915 [343] -10.5457562 -10.4941758 -10.2634544 -9.0924830 -9.0924830 -9.0924830 [349] -9.0924830 2.1213379 2.1213379 2.2469556 3.5868515 1.2682259 [355] 2.1921575 2.4748747 2.2981918 3.2288982 2.6713113 2.1191040 [361] 1.5746595 1.7208782 3.0398692 3.0164842 3.1229032 3.2125443 [367] 2.8603838 2.8137884 2.7569704 2.7914324 -0.6888011 -0.6492829 [373] -0.5177983 -0.5687287 0.1528699 1.3557434 1.5801398 1.8750674 [379] 2.3415981 -3.0977182 -3.1709610 -3.2774723 -3.3399244 -3.7048803 [385] -3.9067909 -3.8750765 -3.8324288 4.2992852 4.6299755 4.5984345 [391] 4.7169236 4.5431256 3.6446182 3.6915541 3.4756501 3.2363164 [397] NA NA NA NA NA NA [403] NA NA NA NA NA NA [409] NA NA NA NA NA NA [415] NA NA NA NA NA NA [421] NA NA NA NA NA NA [427] NA NA NA NA NA NA [433] NA NA NA NA NA NA [439] NA NA NA NA NA NA [445] NA NA NA NA NA NA [451] NA NA NA NA NA NA [457] NA NA NA NA NA NA [463] NA NA NA NA NA NA [469] NA NA NA NA NA NA [475] NA NA NA NA NA NA [481] NA NA NA NA NA NA [487] NA NA NA NA NA NA [493] NA NA NA NA NA NA [499] NA NA NA NA NA NA [505] NA NA NA NA NA NA [511] NA NA NA NA NA NA [517] NA NA NA NA NA NA [523] NA NA NA NA NA NA [529] NA NA NA NA NA NA [535] NA NA NA NA NA NA [541] NA NA NA NA NA NA [547] NA NA NA NA NA NA [553] NA NA NA NA [1] 38.33435 37.99766 38.48252 39.77194 41.19898 43.03406 44.70827 [8] 46.39839 47.84776 49.28706 50.61562 51.99991 53.28981 54.70675 [15] 56.26306 58.20999 60.40969 62.80835 65.11433 67.70209 70.02604 [22] 72.38058 74.73382 77.05526 79.42011 82.18142 84.37359 86.97974 [29] 89.10389 91.98269 94.42656 96.99971 99.48390 101.92069 104.09315 [36] 107.50513 110.44702 113.61674 116.40747 119.31910 122.40399 125.10090 [43] 128.25522 131.20419 134.24199 137.25847 139.87945 142.82854 145.21155 [50] 148.52355 151.03951 154.24934 157.36571 160.54662 163.18261 165.87782 [57] 168.79547 171.77357 174.71958 177.70069 180.27977 183.12595 185.19695 [64] 187.78410 189.89603 192.21856 194.88607 197.48626 199.64622 201.35532 [71] 202.59612 203.90958 205.15586 206.51346 207.90175 209.09971 210.68030 [78] 212.10066 213.22442 214.35766 215.11853 215.94889 216.89842 218.18361 [85] 219.27030 220.39464 221.30049 222.23545 223.08290 224.07856 225.01394 [92] 226.03473 226.84728 227.85320 228.72560 229.82023 230.70083 231.76068 [99] 232.68621 233.70229 234.67860 235.62200 236.75985 237.72491 238.63760 [106] 239.70027 240.59699 241.67892 242.92809 244.16185 245.73140 247.50418 [113] 249.06122 250.84706 252.55632 254.61067 256.29064 258.41239 260.85620 [120] 263.23706 265.57721 268.15832 270.59161 273.26486 275.92520 278.84064 [127] 281.78237 285.17821 288.32853 291.20809 294.40467 297.26764 299.42389 [134] 301.77339 303.73438 306.01213 312.14627 315.85837 317.67028 319.47423 [141] 321.06658 322.75701 324.30725 326.00030 327.58602 329.29892 330.66888 [148] 331.60954 332.45825 333.32754 334.23589 335.23721 336.21961 337.45172 [155] 338.55302 339.56571 340.76908 342.05152 343.16626 344.20656 345.29638 [162] 346.30560 347.21118 348.30180 349.11069 350.02422 350.95842 352.08581 [169] 353.49041 354.80737 355.79784 356.93897 358.38316 359.94892 361.30496 [176] 362.89148 363.78172 364.68722 365.41185 366.12209 366.95411 368.03822 [183] 369.18589 371.01343 372.42716 374.42280 375.75474 377.55587 378.69447 [190] 380.13550 381.46792 382.63988 383.71257 384.76186 385.70887 386.65060 [197] 387.51986 388.50394 389.57407 390.89287 392.55911 394.63934 396.26766 [204] 398.53863 400.43643 402.32481 404.20944 406.49438 408.36493 410.80309 [211] 412.67781 415.34261 417.45586 419.75956 421.73132 424.03591 426.34908 [218] 428.73278 430.91538 433.08463 435.17486 437.47000 439.50339 441.66865 [225] 443.89712 446.43846 448.77512 451.18840 453.04936 454.80333 455.92575 [232] 456.90408 457.72659 458.70755 459.65566 460.63878 461.61311 462.47133 [239] 463.32884 464.19652 464.96635 466.07329 466.93852 467.94649 468.85275 [246] 469.61502 470.19113 470.63766 471.17912 471.72335 472.28591 472.91196 [253] 473.48553 474.04233 474.68471 475.14747 475.68332 476.28249 476.79074 [260] 477.41954 478.06937 478.66464 479.14641 479.82296 480.40690 480.99559 [267] 481.44360 481.95991 482.40811 482.92984 483.49835 484.10302 484.54009 [274] 485.18721 485.81478 486.43615 487.01511 487.71990 488.29391 488.85694 [281] 489.51468 490.20301 490.97481 491.89254 492.82236 493.83293 494.76685 [288] 495.66585 496.47006 497.29604 498.09324 498.88162 499.55218 500.22657 [295] 500.91814 501.62846 502.38397 503.18130 503.86273 504.71250 505.59110 [302] 506.49353 507.23947 508.29556 509.12620 510.14270 510.93503 511.72438 [309] 512.45721 513.25788 513.95195 514.88655 515.68245 516.57734 517.30586 [316] 518.23549 519.01105 519.76280 520.53210 521.25359 522.06413 522.76196 [323] 523.64527 524.45558 525.17325 525.97658 526.76179 527.56676 528.37859 [330] 529.24535 530.11696 530.75170 531.49057 532.35874 533.24294 533.94232 [337] 534.69384 535.35799 535.96980 536.71381 537.48928 538.28813 539.08762 [344] 539.87482 540.52865 541.31240 542.09096 542.90596 543.56144 544.18456 [351] 544.96083 545.87930 546.41808 546.87104 547.24256 547.35624 547.28520 [358] 547.05905 546.83485 546.61280 546.39388 546.25240 546.18661 546.17721 [365] 546.22000 546.25605 546.36081 546.34207 546.31922 546.33308 546.42890 [372] 546.44479 546.49766 546.47718 546.47264 546.45000 546.54023 546.65882 [379] 546.84642 546.90945 546.88000 546.83717 546.81206 546.71844 546.63725 [386] 546.65000 546.66715 546.72922 546.73249 546.71981 546.76746 546.81811 [393] 546.93095 546.94982 546.86301 546.76258 546.73110 546.71498 546.73933 [400] 546.82274 546.84000 546.86943 546.88679 546.89702 547.16618 547.62517 [407] 548.27500 549.38619 550.21469 551.06936 551.85347 552.66799 553.45147 [414] 554.28044 555.09416 555.88263 556.66676 557.40570 558.12358 558.88891 [421] 559.75257 560.53972 561.35338 562.12873 562.84360 563.55544 564.22452 [428] 564.87171 565.68925 566.46066 567.04580 567.85932 568.63138 569.40812 [435] 570.04841 570.74649 571.41838 572.05092 572.83405 573.54088 574.11587 [442] 574.87225 575.52021 576.17204 576.80878 577.50566 578.19565 578.86898 [449] 579.53517 580.30412 580.87350 581.53878 582.13642 582.77290 583.30889 [456] 583.96005 584.56269 585.20316 585.81055 586.26915 586.70851 587.25002 [463] 587.68134 588.18382 588.58202 588.95139 589.24577 589.71264 590.08109 [470] 590.45178 590.78966 591.16255 591.48615 591.90023 592.26879 592.63766 [477] 593.01179 593.32224 593.64646 593.99731 594.33594 594.68155 595.05696 [484] 595.52397 595.91616 596.26323 596.69065 597.06040 597.41678 597.75324 [491] 598.10161 598.38922 598.78020 599.10771 599.46898 599.81086 600.17915 [498] 600.48356 600.83857 601.19848 601.53247 601.90816 602.25005 602.62368 [505] 602.98005 603.30237 603.66184 604.05060 604.40937 604.83322 605.23135 [512] 605.63635 605.99343 606.30835 606.74081 607.07085 607.40257 607.78371 [519] 608.11320 608.46842 608.89703 609.11033 609.21410 609.15648 609.05790 [526] 608.95167 608.85358 608.80538 608.79000 608.78749 608.76067 608.75239 [533] 608.73257 608.67869 608.64000 608.56737 608.52671 608.42947 608.38180 [540] 608.37000 608.36184 608.39137 608.54450 608.77741 609.14219 609.51074 [547] 609.85053 610.15829 610.51128 610.84680 611.18157 611.47206 611.83323 [554] 612.16409 612.57674 612.93303 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 31 O2 values from manual exclude period 296.401582 to 296.402409" [1] "Not reporting 31 APO values from manual exclude period 296.401582 to 296.402409" [1] "Not reporting 40 O2 values from manual exclude period 296.415374 to 296.416477" [1] "Not reporting 40 APO values from manual exclude period 296.415374 to 296.416477" [1] "Not reporting 10 O2 values from manual exclude period 296.417856 to 296.418132" [1] "Not reporting 10 APO values from manual exclude period 296.417856 to 296.418132" [1] "Not reporting 21 O2 values from manual exclude period 296.461715 to 296.462266" [1] "Not reporting 21 APO values from manual exclude period 296.461715 to 296.462266" [1] "Not reporting 30 O2 values from manual exclude period 296.484609 to 296.485437" [1] "Not reporting 30 APO values from manual exclude period 296.484609 to 296.485437" [1] "Not reporting 30 O2 values from manual exclude period 296.528744 to 296.529571" [1] "Not reporting 30 APO values from manual exclude period 296.528744 to 296.529571" [1] "Not reporting 51 O2 values from manual exclude period 296.588049 to 296.589428" [1] "Not reporting 51 APO values from manual exclude period 296.588049 to 296.589428" [1] "Not reporting 30 O2 values from manual exclude period 296.674387 to 296.675214" [1] "Not reporting 30 APO values from manual exclude period 296.674387 to 296.675214" [1] "Not reporting 30 O2 values from manual exclude period 296.691489 to 296.692316" [1] "Not reporting 30 APO values from manual exclude period 296.691489 to 296.692316" [1] "Not reporting 40 O2 values from manual exclude period 296.721555 to 296.722659" [1] "Not reporting 40 APO values from manual exclude period 296.721555 to 296.722659" [1] "Not reporting 72 smoothed O2 values from manual exclude period 296.400845103787 to 296.401682311962" [1] "Not reporting 72 smoothed APO values from manual exclude period 296.400845103787 to 296.401682311962" [1] "Not reporting 94 smoothed O2 values from manual exclude period 296.414705135073 to 296.415787421256" [1] "Not reporting 94 smoothed APO values from manual exclude period 296.414705135073 to 296.415787421256" [1] "Not reporting 25 smoothed O2 values from manual exclude period 296.417157367492 to 296.417443525107" [1] "Not reporting 25 smoothed APO values from manual exclude period 296.417157367492 to 296.417443525107" [1] "Not reporting 48 smoothed O2 values from manual exclude period 296.461008664942 to 296.461565133375" [1] "Not reporting 48 smoothed APO values from manual exclude period 296.461008664942 to 296.461565133375" [1] "Not reporting 73 smoothed O2 values from manual exclude period 296.483870329371 to 296.484714076446" [1] "Not reporting 73 smoothed APO values from manual exclude period 296.483870329371 to 296.484714076446" [1] "Not reporting 72 smoothed O2 values from manual exclude period 296.528039866177 to 296.528873625807" [1] "Not reporting 72 smoothed APO values from manual exclude period 296.528039866177 to 296.528873625807" [1] "Not reporting 118 smoothed O2 values from manual exclude period 296.587374288985 to 296.588738591527" [1] "Not reporting 118 smoothed APO values from manual exclude period 296.587374288985 to 296.588738591527" [1] "Not reporting 72 smoothed O2 values from manual exclude period 296.673682259212 to 296.67451436113" [1] "Not reporting 72 smoothed APO values from manual exclude period 296.673682259212 to 296.67451436113" [1] "Not reporting 73 smoothed O2 values from manual exclude period 296.690733638393 to 296.691577437473" [1] "Not reporting 73 smoothed APO values from manual exclude period 296.690733638393 to 296.691577437473" [1] "Not reporting 96 smoothed O2 values from manual exclude period 296.720874784202 to 296.721989361941" [1] "Not reporting 96 smoothed APO values from manual exclude period 296.720874784202 to 296.721989361941" [1] "Not reporting 72 smoothed O2 values from manual exclude period 296.400845103787 to 296.401682311962" [1] "Not reporting 72 smoothed APO values from manual exclude period 296.400845103787 to 296.401682311962" [1] "Not reporting 94 smoothed O2 values from manual exclude period 296.414705135073 to 296.415787421256" [1] "Not reporting 94 smoothed APO values from manual exclude period 296.414705135073 to 296.415787421256" [1] "Not reporting 25 smoothed O2 values from manual exclude period 296.417157367492 to 296.417443525107" [1] "Not reporting 25 smoothed APO values from manual exclude period 296.417157367492 to 296.417443525107" [1] "Not reporting 48 smoothed O2 values from manual exclude period 296.461008664942 to 296.461565133375" [1] "Not reporting 48 smoothed APO values from manual exclude period 296.461008664942 to 296.461565133375" [1] "Not reporting 73 smoothed O2 values from manual exclude period 296.483870329371 to 296.484714076446" [1] "Not reporting 73 smoothed APO values from manual exclude period 296.483870329371 to 296.484714076446" [1] "Not reporting 72 smoothed O2 values from manual exclude period 296.528039866177 to 296.528873625807" [1] "Not reporting 72 smoothed APO values from manual exclude period 296.528039866177 to 296.528873625807" [1] "Not reporting 118 smoothed O2 values from manual exclude period 296.587374288985 to 296.588738591527" [1] "Not reporting 118 smoothed APO values from manual exclude period 296.587374288985 to 296.588738591527" [1] "Not reporting 72 smoothed O2 values from manual exclude period 296.673682259212 to 296.67451436113" [1] "Not reporting 72 smoothed APO values from manual exclude period 296.673682259212 to 296.67451436113" [1] "Not reporting 73 smoothed O2 values from manual exclude period 296.690733638393 to 296.691577437473" [1] "Not reporting 73 smoothed APO values from manual exclude period 296.690733638393 to 296.691577437473" [1] "Not reporting 96 smoothed O2 values from manual exclude period 296.720874784202 to 296.721989361941" [1] "Not reporting 96 smoothed APO values from manual exclude period 296.720874784202 to 296.721989361941" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171023_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 135932 items [1] 11 3399 33983 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33766 [1] "Average Date / Time for slice RF11 = 2017-10-23 14:10:43.5611782073975" [1] "sum(lsel) = 2648" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.224 811.991 [1] 0.224 811.991 [1] 188.009 999.776 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 671.121" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF11 APO_AO2 range = -349.17,-319.97" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171023_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 135932 items [1] 11 3399 33983 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33776 [1] "Average Date / Time for slice RF11 = 2017-10-23 14:10:43.5611782073975" [1] "sum(lsel) = 2648" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.224 811.991 [1] 0.224 811.991 [1] 188.009 999.776 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 671.121" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF11 O2_AO2 range = -653.63,-603.22" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171023_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 135932 items [1] 11 3399 33983 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 34276 [1] "Average Date / Time for slice RF11 = 2017-10-23 14:09:27.9314160346985" [1] "sum(lsel) = 2712" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.224 811.991 [1] 0.224 811.991 [1] 188.009 999.776 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 671.121" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF11 CO2_AO2 range = 403.3,409.38" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"