[1] "2025-05-13 16:33:23 MDT" options [1,] "file" "171020a" [2,] "flight" "RF10" [3,] "project" "ATOM3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "17" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "171020a" [1] "Reading in flight and plotting intervals" Read 28 records [1] "Reading in /scr/raf/stephens/AO2DAT/171020a.mr" Read 14357 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.36 seconds" [1] "New JOGEST = 2.36 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/171020a.hr" Read 57431 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 04:33:24 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30767 description: HS CO2 = 378.73 O2 = -552.6" [1] "position 2 cylinder OK30768 description: LS CO2 = 408.77 O2 = -698" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -583.5" [1] "position 4 cylinder OK30770 description: WT CO2 = 398.49 O2 = -708" [1] "position 5 cylinder OK30769 description: LP CO2 = 404.97 O2 = -714.3" [1] 378.7290 408.7741 393.4139 398.4880 404.9658 [1] -552.6082 -698.0328 -583.4871 -708.0025 -714.3188 [1] "Nominal linear calibrations:" [1] "co2scl = 1.051 co2off = 4.15 o2scla = -0.054 o2offa = -121.9" [1] "(dV/V)/(dXO2/XO2) = -3.881" [1] "(dV/V)/d(O2/N2) = -3.069" [1] "Reading in very high resolution timeseries" Read 287140 records [1] 287140 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:33:24 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:33:26 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.069" [1] "o2scaleavenew_drelVdrelP = -3.881" [1] "median(o2scalenew) = -3.083" [1] "Empirical dV/V vs dP/P relationship =-4.153, r^2 =0.657, damping =1.07" [1] "Tue May 13 04:33:26 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1940 $icochar [1] "0" "0" "17:00:37" "09:17:17" "10:11:00" [6] "293.387184" "293.419898" "293.441708" "293.481919" "293.499639" [11] "293.541214" "293.554163" "293.554163" "293.585515" "293.598" [16] "293.609028" "293.634927" "293.650262" "293.677523" "293.457724" [21] "293.460450" "293.472718" "293.517019" "293.519064" "293.527924" [26] "293.665256" "16:25:00" "293.685" $ecochar [1] "367" "09:17:17" "367" "17:00:37" "10:12:00" [6] "293.419898" "293.444775" "293.481919" "293.502706" "293.541214" [11] "293.558253" "293.585515" "293.575" "293.611754" "293.611754" [16] "293.634927" "293.653329" "293.677523" "293.708875" "293.458747" [21] "293.461473" "293.474763" "293.518723" "293.520086" "293.528605" [26] "293.666278" "16:40:00" "293.691" $flag [1] "all" "LP" "LP" "flight" [5] "breath" "a" "b" "c" [9] "d" "e" "f" "g" [13] "g_nostrat" "h" "h_nostrat" "i" [17] "j" "k" "l" "donotreporto2" [21] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [25] "donotreporto2" "donotreporto2" "MMS" "donotreporto2" $ico2 [1] 0.0000 0.0000 293.7088 293.3870 293.4243 293.3872 293.4199 293.4417 [9] 293.4819 293.4996 293.5412 293.5542 293.5542 293.5855 293.5980 293.6090 [17] 293.6349 293.6503 293.6775 293.4577 293.4604 293.4727 293.5170 293.5191 [25] 293.5279 293.6653 293.6840 293.6850 $eco2 [1] 367.0000 293.3870 367.0000 293.7088 293.4250 293.4199 293.4448 293.4819 [9] 293.5027 293.5412 293.5583 293.5855 293.5750 293.6118 293.6118 293.6349 [17] 293.6533 293.6775 293.7089 293.4587 293.4615 293.4748 293.5187 293.5201 [25] 293.5286 293.6663 293.6944 293.6910 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1939 1939 293.387 7.765414 -0.00120780 -0.00334085 -0.00334085 1939 1940 1940 293.387 7.765351 -0.00120835 -0.00362465 -0.00362465 1940 1941 1941 293.387 7.765096 -0.00113695 -0.00358945 -0.00358945 1941 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1939 10.5 6.00 20.00 4550.50 -1 7.764512 7.764023 1940 10.5 2.25 20.75 1146.75 1 7.764327 7.763839 1941 10.5 1.00 21.00 25.50 -1 7.764058 7.763599 vuvsigpdprcorr 1939 7.765374 1940 7.765304 1941 7.765050 [1] 0.3869770 0.3870041 0.3870312 [,1] [,2] [,3] [1,] 0.386989 -1 6 [2,] 0.386998 1 6 [3,] 0.387004 1 1 [4,] 0.387010 1 1 [5,] 0.387015 1 1 [6,] 0.387025 -1 1 [7,] 0.387031 -1 1 [8,] 0.387037 -1 1 [9,] 0.387043 -1 1 [10,] 0.387053 1 1 [11,] 0.387058 1 1 [12,] 0.387064 1 1 [13,] 0.387070 1 1 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1940 $icochar [1] "0" "0" "17:00:37" "09:17:17" "10:11:00" [6] "293.387184" "293.419898" "293.441708" "293.481919" "293.499639" [11] "293.541214" "293.554163" "293.554163" "293.585515" "293.598" [16] "293.609028" "293.634927" "293.650262" "293.677523" "293.457724" [21] "293.460450" "293.472718" "293.517019" "293.519064" "293.527924" [26] "293.665256" "16:25:00" "293.685" $ecochar [1] "367" "09:17:17" "367" "17:00:37" "10:12:00" [6] "293.419898" "293.444775" "293.481919" "293.502706" "293.541214" [11] "293.558253" "293.585515" "293.575" "293.611754" "293.611754" [16] "293.634927" "293.653329" "293.677523" "293.708875" "293.458747" [21] "293.461473" "293.474763" "293.518723" "293.520086" "293.528605" [26] "293.666278" "16:40:00" "293.691" $flag [1] "all" "LP" "LP" "flight" [5] "breath" "a" "b" "c" [9] "d" "e" "f" "g" [13] "g_nostrat" "h" "h_nostrat" "i" [17] "j" "k" "l" "donotreporto2" [21] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [25] "donotreporto2" "donotreporto2" "MMS" "donotreporto2" $ico2 [1] 0.0000 0.0000 293.7088 293.3870 293.4243 293.3872 293.4199 293.4417 [9] 293.4819 293.4996 293.5412 293.5542 293.5542 293.5855 293.5980 293.6090 [17] 293.6349 293.6503 293.6775 293.4577 293.4604 293.4727 293.5170 293.5191 [25] 293.5279 293.6653 293.6840 293.6850 $eco2 [1] 367.0000 293.3870 367.0000 293.7088 293.4250 293.4199 293.4448 293.4819 [9] 293.5027 293.5412 293.5583 293.5855 293.5750 293.6118 293.6118 293.6349 [17] 293.6533 293.6775 293.7089 293.4587 293.4615 293.4748 293.5187 293.5201 [25] 293.5286 293.6663 293.6944 293.6910 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1939 1939 293.387 7.765414 -0.00120780 -0.00334085 -0.00334085 1939 1940 1940 293.387 7.765351 -0.00120835 -0.00362465 -0.00362465 1940 1941 1941 293.387 7.765096 -0.00113695 -0.00358945 -0.00358945 1941 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1939 10.5 6.00 20.00 4550.50 -1 7.764512 7.764023 1940 10.5 2.25 20.75 1146.75 1 7.764327 7.763839 1941 10.5 1.00 21.00 25.50 -1 7.764058 7.763599 vuvsigpdprcorr 1939 7.765374 1940 7.765304 1941 7.765050 [1] 0.3869770 0.3870041 0.3870312 [,1] [,2] [,3] [1,] 0.386989 -1 6 [2,] 0.386998 1 6 [3,] 0.387004 1 1 [4,] 0.387010 1 1 [5,] 0.387015 1 1 [6,] 0.387025 -1 1 [7,] 0.387031 -1 1 [8,] 0.387037 -1 1 [9,] 0.387043 -1 1 [10,] 0.387053 1 1 [11,] 0.387058 1 1 [12,] 0.387064 1 1 [13,] 0.387070 1 1 [1] "JOGAVES DOES NOT MATCH" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:34:07 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 19008040.100832 SECONDS" [1] "Tue May 13 04:34:07 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 3.7827 4.3031 [1] -3.249084 -2.856184 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -189.858 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 59.422 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 59.162 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -28.034 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 22 [1] 22 [1] 75 [1] 75 [1] 75 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 70 293.3359 -370.89451961 1010853.5 -1 [2,] 134 293.3377 -200.37185632 1013016.5 -1 [3,] 136 293.3378 -44.18716725 1013222.0 -1 [4,] 198 293.3395 -270.35896022 1014633.8 -1 [5,] 262 293.3412 -226.65373020 1016216.9 -1 [6,] 355 293.3438 -156.77900635 1018259.4 1 [7,] 356 293.3438 -216.94246581 1018136.3 -1 [8,] 357 293.3438 -155.15060921 1018518.0 1 [9,] 358 293.3438 -66.56485158 1018518.8 -1 [10,] 448 293.3463 -502.36505070 1019684.5 -1 [11,] 510 293.3480 -271.99566576 1020938.4 -1 [12,] 768 293.3550 -483.38909402 1023533.8 -1 [13,] 830 293.3567 -223.36836567 1024390.6 -1 [14,] 1210 293.3671 -306.43840027 1024368.4 -1 [15,] 1212 293.3672 -510.23082730 1024158.1 -1 [16,] 1528 293.3758 -357.99910459 1021178.8 -1 [17,] 1592 293.3776 -61.52579946 1021754.0 -1 [18,] 2410 293.3999 -266.02156682 1001244.9 -1 [19,] 2478 293.4018 -187.11200966 999393.7 -1 [20,] 2480 293.4019 -497.53414216 999045.2 -1 [21,] 3070 293.4180 -268.34236443 981409.7 -1 [22,] 3076 293.4181 -487.66537511 981045.2 -1 [23,] 3140 293.4199 -53.13284007 979936.5 -1 [24,] 3204 293.4216 -336.95515992 978082.7 -1 [25,] 3397 293.4269 -212.44283910 973436.7 1 [26,] 3398 293.4269 -185.72281741 973164.8 -1 [27,] 3399 293.4269 -304.10613182 973130.4 1 [28,] 3400 293.4270 -375.09358789 972603.3 -1 [29,] 3401 293.4270 -286.58528331 972815.7 1 [30,] 4156 293.4477 -264.63981668 967342.5 -1 [31,] 4226 293.4496 -119.95219496 968506.2 -1 [32,] 4972 293.4700 -269.90207139 982876.0 -1 [33,] 4978 293.4701 -9.73818020 983235.4 -1 [34,] 5040 293.4718 -466.12606126 983891.4 -1 [35,] 6266 293.5054 -229.59711989 982671.5 -1 [36,] 6336 293.5073 -95.59686372 983659.5 -1 [37,] 6400 293.5090 -298.28530386 984473.5 -1 [38,] 6464 293.5108 -79.50874143 985687.9 -1 [39,] 7518 293.5396 -252.81279106 1005001.2 -1 [40,] 7524 293.5397 -37.09266728 1005209.7 -1 [41,] 7588 293.5415 -442.33559812 1004559.3 -1 [42,] 8654 293.5708 -227.29785081 996899.1 -1 [43,] 8722 293.5726 -219.71186243 997563.1 -1 [44,] 8724 293.5727 5.49530375 997799.6 -1 [45,] 9590 293.5963 -207.05173961 992514.1 -1 [46,] 9596 293.5964 0.01743369 992703.8 -1 [47,] 9660 293.5982 -476.98181233 992363.9 -1 [48,] 10630 293.6247 -205.60133154 1003604.1 -1 [49,] 10636 293.6248 -19.00639419 1003945.6 -1 [50,] 10700 293.6266 -478.81605963 1004895.9 -1 [51,] 10828 293.6301 -20.11341727 1007317.8 -1 [52,] 11986 293.6618 -193.02283182 1016756.4 -1 [53,] 11992 293.6620 -479.71545320 1016526.4 -1 [54,] 12054 293.6637 -156.26404114 1017843.3 -1 [55,] 12885 293.6865 -250.86370071 1011612.8 1 [56,] 12886 293.6865 -265.45267047 1011264.9 -1 [57,] 12887 293.6866 -191.57412546 1011409.2 1 [58,] 12891 293.6867 -214.62743718 1011506.9 1 [59,] 12892 293.6867 -149.76852379 1011284.2 -1 [60,] 12893 293.6867 -112.71030886 1011292.3 1 [61,] 13653 293.7076 -268.48824097 1007767.9 1 [62,] 13654 293.7076 -286.84980998 1007622.7 -1 [63,] 13655 293.7076 -187.21264341 1008106.1 1 [64,] 13656 293.7077 -99.36330222 1008142.0 -1 [65,] 13657 293.7077 -160.98487912 1008352.8 1 [66,] 13698 293.7088 -210.62265124 1008967.3 -1 [67,] 13716 293.7093 209.27724371 1009756.7 -1 [68,] 14066 293.7189 -480.21602685 1021161.1 -1 [69,] 14071 293.7190 -502.52923953 1021854.3 1 [70,] 14072 293.7190 -536.53443519 1021419.1 -1 [71,] 14073 293.7191 -547.87711439 1022054.8 1 [72,] 14128 293.7206 -386.87902870 1024192.5 -1 [73,] 14190 293.7222 -221.35120394 1027746.4 -1 [74,] 14192 293.7223 -10.44601897 1028033.1 -1 [75,] 14312 293.7256 79.93738537 1034163.6 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 150 293.3382 9.562500e+24 [2,] 912 293.3589 9.358952e+04 [3,] 1788 293.3829 2.859790e+02 [4,] 6597 293.5144 3.814720e+02 [5,] 11321 293.6436 2.884060e+02 [6,] 12507 293.6761 9.555996e+07 [7,] 13168 293.6943 2.882840e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 162.284 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 59.422 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 59.162 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -28.034 PER MEG" [1] 378.7290 408.7741 393.4139 398.4880 404.9658 [1] -552.6082 -698.0328 -583.4871 -708.0025 -714.3188 [1] "Nominal linear calibrations:" [1] "co2scl = 1.051 co2off = 4.12 o2scla = -0.054 o2offa = -122.4" [1] "(dV/V)/(dXO2/XO2) = -3.895" [1] "(dV/V)/d(O2/N2) = -3.079" [1] "Finding cal and sample periods" [1] "Median Cal: 2.45 minutes" [1] "Average Cal: 2.44 minutes" [1] "Shortest Cal: 2.15 minutes" [1] "Longest Cal: 5 minutes" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-1HZ_DC8_20171020_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 497772 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-20Hz_DC8_20171020_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 14397266 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = 0.000229" [1] "HS CO2 vs. PACAB: m = -0.000209, r^2 = 0.02" [1] "LS CO2 vs. PACAB: m = 0.000668, r^2 = 0.04" [1] "HS+LS LIH2O vs. PACAB: m = -1.87e-05" [1] "HS LIH2O vs. PACAB: m = -2.84e-05, r^2 = 0.28" [1] "LS LIH2O vs. PACAB: m = -8.98e-06, r^2 = 0.05" [1] "HS+LS CO2 vs. LIH2O: m = -24.2" [1] "HS CO2 vs. LIH2O: m = 0.771, r^2 = 0" [1] "LS CO2 vs. LIH2O: m = -49.1, r^2 = 0.55" [1] "APCO2 vs. PACAB: m = 0.015, r^2 = 0.4" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.0431" [1] "HS O2 vs. PACAB: m = -0.0376, r^2 = 0.61" [1] "LS O2 vs. PACAB: m = -0.0486, r^2 = 0.63" [1] "HS+LS O2 vs. LIH2O: m = 282" [1] "HS O2 vs. LIH2O: m = 406, r^2 = 0.22" [1] "LS O2 vs. LIH2O: m = 158, r^2 = 0.01" [1] "HS+LS O2 vs. PAO2: m = -5.14" [1] "HS O2 vs. PAO2: m = -5.69, r^2 = 0.67" [1] "LS O2 vs. PAO2: m = -4.58, r^2 = 0.26" [1] "HS+LS O2 vs. TPBOX: m = 0.16" [1] "HS O2 vs. TPBOX: m = 1.25, r^2 = 0.3" [1] "LS O2 vs. TPBOX: m = -0.935, r^2 = 0.09" [1] "APO vs. PACAB: m = -0.255, r^2 = 0.4" [1] "APO vs. PAO2: m = -6.37, r^2 = 0.09" [1] "APO vs. TPBOX: m = 1.14, r^2 = 0.03" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.0315, r^2 = 0.01" [1] "LS CO2 vs. LiCor Cell P: m = -0.129, r^2 = 0.04" [1] "HS CO2 vs. CO2 Vol P: m = 0.112, r^2 = 0.08" [1] "LS CO2 vs. CO2 Vol P: m = 0.0588, r^2 = 0.01" [1] "HS CO2 vs. SLOPE: m = 0.548, r^2 = 0.11" [1] "LS CO2 vs. SLOPE: m = -1.27, r^2 = 0.33" [1] "HS O2 vs. O2 Vol P: m = -5.83, r^2 = 0.45" [1] "LS O2 vs. O2 Vol P: m = -4.19, r^2 = 0.24" [1] "HS O2 vs. O2 Cell T: m = 2.79, r^2 = 0.48" [1] "LS O2 vs. O2 Cell T: m = 2.34, r^2 = 0.34" [1] "HS O2 vs. CO2 Vol P: m = -2.18, r^2 = 0.04" [1] "LS O2 vs. CO2 Vol P: m = 0.817, r^2 = 0.01" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -4.04, r^2 = 0.07" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -1.37, r^2 = 0.01" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -2.18, r^2 = 0.04" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 0.817, r^2 = 0.01" [1] "HS O2 vs. LIH2O: m = -45.6, r^2 = 0" [1] "LS O2 vs. LIH2O: m = -25.8, r^2 = 0" [1] "HS O2 vs. SLOPE: m = -0.0839, r^2 = 0.01" [1] "LS O2 vs. SLOPE: m = 0.442, r^2 = 0.1" [1] "HS CO2 vs. Time: m = 13.325, r^2 = 0.95" [1] "LS CO2 vs. Time: m = 13.908, r^2 = 0.93" [1] "HS CO2 vs. Cylinder T: m = -0.098, r^2 = 0.02" [1] "LS CO2 vs. Cylinder T: m = -0.314, r^2 = 0.073" [1] "HS CO2 vs. Regulator T: m = -0.097, r^2 = 0.14" [1] "LS CO2 vs. Regulator T: m = -0.161, r^2 = 0.139" [1] "HS CO2 vs. Ref. Volumes T: m = -0.054, r^2 = 0.04" [1] "LS CO2 vs. Ref. Volumes T: m = -0.083, r^2 = 0.034" [1] "HS CO2 vs. Manifold T: m = -0.049, r^2 = 0.1" [1] "LS CO2 vs. Manifold T: m = -0.068, r^2 = 0.072" [1] "HS CO2 vs. Pump Box T: m = -0.044, r^2 = 0.14" [1] "LS CO2 vs. Pump Box T: m = -0.075, r^2 = 0.148" [1] "HS O2 vs. Cylinder T: m = 3.565, r^2 = 0.04" [1] "LS O2 vs. Cylinder T: m = 5.382, r^2 = 0.091" [1] "HS O2 vs. Regulator T: m = 3.581, r^2 = 0.29" [1] "LS O2 vs. Regulator T: m = 2.303, r^2 = 0.119" [1] "HS O2 vs. Ref. Volumes T: m = 3.648, r^2 = 0.28" [1] "LS O2 vs. Ref. Volumes T: m = 3.849, r^2 = 0.307" [1] "HS O2 vs. Manifold T: m = 2.322, r^2 = 0.36" [1] "LS O2 vs. Manifold T: m = 1.25, r^2 = 0.101" [1] "HS O2 vs. Pump Box T: m = 1.404, r^2 = 0.21" [1] "LS O2 vs. Pump Box T: m = -0.382, r^2 = 0.016" [1] "HS CO2 vs. WT P: m = 0, r^2 = 0.04" [1] "LS CO2 vs. WT P: m = 0, r^2 = 0.003" [1] "HS CO2 vs. SP P: m = 0.000393, r^2 = 0.09" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.024, r^2 = 0.12" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.024, r^2 = 0.12" [1] "LS CO2 vs. SP P: m = 0.000311, r^2 = 0.01" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.046, r^2 = 0.33" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.046, r^2 = 0.33" [1] "HS CO2 vs. WT FL: m = 0.047, r^2 = 0.03" [1] "LS CO2 vs. WT FL: m = 0.089, r^2 = 0.041" [1] "HS CO2 vs. SP FL: m = -0.01, r^2 = 0.02" [1] "LS CO2 vs. SP FL: m = 0.004, r^2 = 0.001" [1] "HS O2 vs. SLPDIFF: m = -0.505, r^2 = 0.14" [1] "LS O2 vs. SLPDIFF: m = -0.169, r^2 = 0.003" [1] "HS O2 vs. WT P: m = -0.036, r^2 = 0.36" [1] "LS O2 vs. WT P: m = -0.046, r^2 = 0.577" [1] "HS O2 vs. SP P: m = -0.035, r^2 = 0.34" [1] "LS O2 vs. SP P: m = -0.046, r^2 = 0.603" [1] "HS O2 vs. WT FL: m = -1.413, r^2 = 0.04" [1] "LS O2 vs. WT FL: m = 1.816, r^2 = 0.071" [1] "HS O2 vs. SP FL: m = 0.963, r^2 = 0.26" [1] "LS O2 vs. SP FL: m = 1.552, r^2 = 0.813" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 50.17, 46.52" [1] "Empirical LP O2 lag flow(s): 106.7, 109.7" [1] "Empirical LP CO2 lag time(s): 40.67, 55.85" [1] "Empirical LP CO2 lag flow(s): 106.7, 109.7" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.42" [1] "Median all HS CO2 SD = 0.42" [1] "Median all LS CO2 SD = 0.44" [1] "Median all LT CO2 SD = 0.46" [1] "Median all WT CO2 SD = 0.4" [1] "Median all HS or LS CO2 SD = 0.43" [1] "Median all cal O2 SD = 1.9" [1] "Median all HS O2 SD = 1.64" [1] "Median all LS O2 SD = 1.87" [1] "Median all LT O2 SD = 1.73" [1] "Median all WT O2 SD = 1.6" [1] "Median all HS or LS O2 SD = 1.85" [1] "Median all cal CO2 Slope = -0.02" [1] "Median all HS CO2 Slope = -0.02" [1] "Median all LS CO2 Slope = 0" [1] "Median all LT CO2 Slope = 0.06" [1] "Median all WT CO2 Slope = 0.01" [1] "Median all HS or LS CO2 Slope = -0.02" [1] "Median all cal O2 Slope = -0.28" [1] "Median all HS O2 Slope = 0.06" [1] "Median all LS O2 Slope = -0.33" [1] "Median all LT O2 Slope = -0.81" [1] "Median all WT O2 Slope = -0.57" [1] "Median all HS or LS O2 Slope = -0.25" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 5.34 per meg" [1] "Initial O2 Calibration Offset = 9.83 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.25 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 11.02 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 1.69 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 28860.02 62791.98" [1] "Time lag adjustments = 17 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 58.5 at 109 sccm" [1] "Median O2 delay + tlagff = 59.1 at 109 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 56.7 at 109 sccm" [1] "Median O2 delay from 3-way + tlagff = 57.3 at 109 sccm" [1] "after calc and ff lag: 28795.87 62726.88" [1] "2025-05-13 16:34:54 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] -5.8303103 -8.2562850 -6.5800121 -5.7215139 -5.7215139 -6.1386869 [7] -6.1566970 -4.6230280 -4.6230280 -4.6230280 -4.6230280 -4.4155610 [13] -4.1112735 -3.8372980 -3.7184775 0.3050618 0.3099154 0.3092600 [19] 0.3101872 2.9022411 4.2486807 4.2572500 4.2572500 3.1910127 [25] -9.5304212 -9.5947401 -9.8275133 -9.8275133 -8.3266992 -8.3266992 [31] -8.3266992 -8.3266992 -7.2761223 -5.7886872 -5.7886872 -5.7886872 [37] -8.1800926 -8.0173926 -7.3000912 -6.8583281 -5.1881157 -3.7948835 [43] -3.7948835 -3.7948835 -6.8805320 -14.8033529 -14.8165821 -14.8181564 [49] -14.8181564 -7.0822486 -1.9196462 2.0260996 2.7693647 -1.7243972 [55] -1.7243972 -2.2213416 -5.1727819 -13.8835681 -13.8835681 -13.8835681 [61] -13.8835681 -5.8767942 -1.9682206 -0.8176500 -0.5343649 -2.4420816 [67] -8.2931718 -8.2931718 -6.6107658 -5.2464812 1.6423267 -1.2661111 [73] -3.0301003 -2.9723149 -5.6468605 -2.0983446 -2.0983446 -2.0983446 [79] -1.8619887 -1.8619887 -1.8619887 1.5588826 1.4315901 1.4315901 [85] 1.4315901 1.4315901 3.1642120 5.4963917 4.0910365 1.9803164 [91] -0.7201091 -1.7047126 -1.7047126 -1.7047126 -1.7047126 -8.0699460 [97] -8.0699460 -8.0699460 -8.0699460 -8.6683047 -8.1451132 -7.4738602 [103] -7.0356800 -5.0002735 -5.0002735 -5.0002735 -5.0002735 -4.0446914 [109] -5.1161784 -9.1821546 -9.1821546 -9.1821546 -11.1505443 -9.4474235 [115] -7.7126822 -7.7126822 -7.6844547 -6.0527833 -0.9427326 2.1089809 [121] 0.3532537 0.3532537 0.3532537 -5.7455627 -8.2972292 -9.1111902 [127] -9.1111902 -6.9255460 -0.7879939 0.9972998 0.9972998 0.9972998 [133] -4.7430370 -8.8884082 -9.1259286 -9.1259286 -9.0689078 -6.9026185 [139] -2.1630050 0.1514707 0.1514707 1.1904829 1.1904829 -4.5193261 [145] -5.4815045 1.2661547 1.3154467 -0.7669836 -5.6437381 -9.7403835 [151] -15.1819576 -15.1402224 -13.7598425 -11.3918125 -7.3349050 -7.3349050 [157] -7.3349050 -7.3288233 -10.1774800 -9.8713759 -9.3040527 -8.9518607 [163] -4.6637840 -4.6637840 -4.6637840 -4.6637840 -6.9222674 -4.2280185 [169] -1.3023924 -1.3023924 -1.0501225 -0.3043246 -0.3043246 -0.3043246 [175] -0.2525908 -3.1466946 -3.1466946 -3.1466946 -3.1466946 -0.2355599 [181] -0.2355599 -0.7368713 -1.4193084 4.9449099 4.9449099 4.9449099 [187] 4.9449099 6.4541833 6.7113436 7.6256012 8.4070494 2.1708627 [193] -2.5342541 -2.5342541 -2.5342541 -2.5024546 0.5838874 0.5838874 [199] -0.2932100 -2.0460415 -2.2314231 -2.2314231 -2.2314231 -2.2314231 [205] 3.6297820 4.5668601 6.8778393 8.0865432 -0.7157668 -0.7157668 [211] -0.7157668 -0.7157668 0.7736361 4.0693111 6.8631996 7.4994094 [217] 8.1400482 10.0272261 10.0272261 10.0272261 10.0272261 5.0636057 [223] 1.7888807 -1.8904282 -2.3056223 -6.4986075 -6.4986075 -6.4986075 [229] -6.4986075 -2.3520936 -2.1356399 -1.6301813 -0.8638069 -0.9726347 [235] -1.5760344 -1.5760344 -1.5760344 -1.4732019 0.3468230 0.6413479 [241] 0.8886601 0.8886601 8.1828054 8.1828054 8.1828054 8.1828054 [247] -1.4380583 -1.3840084 -1.2276977 -1.1172557 1.3239123 1.8354255 [253] 1.8362256 1.8362256 4.4173128 5.9693712 5.9693712 5.7970371 [259] 5.5613873 5.3688183 4.4329646 3.4346875 0.7513409 0.7513409 [265] 0.7513409 0.7513409 0.4140950 0.4140950 1.5722742 3.8354268 [271] 4.7164778 3.2547454 3.2547454 3.2547454 3.2684307 6.7401680 [277] 6.5340152 5.1340580 3.7215991 3.5618533 3.5618533 3.5618533 [283] 3.5618533 0.6942302 1.6113959 2.0363754 2.0363754 5.8135491 [289] 5.8135491 5.8135491 4.5991670 -3.5692954 -6.3537177 -6.6685391 [295] -6.6685391 1.1154348 1.2021091 3.6636428 5.9089140 4.2717149 [301] 4.2717149 4.2717149 4.2717149 6.3977145 6.7807310 6.7807310 [307] 6.7807310 4.3563577 2.2928045 2.2167047 2.1882305 2.1852661 [313] 3.8646478 3.8646478 3.8767654 3.8932653 1.5521060 1.5521060 [319] 1.5521060 1.5175881 5.5115696 2.9713189 -0.7841306 -0.7841306 [325] 0.8429091 2.4043303 2.4043303 2.4043303 3.5502424 -4.0563790 [331] -2.6181086 -2.6181086 -2.6181086 -2.2110093 -2.2110093 -2.2110093 [337] -1.4537500 9.2317934 10.3081803 10.3081803 10.3081803 8.4332012 [343] 7.5007402 7.5007402 7.5007402 7.5007402 5.1076388 4.5119407 [349] 3.9232363 3.3271125 6.9623852 6.3832750 6.1217677 6.1217677 [355] -2.7652166 -2.7652166 -2.7652166 -2.7652166 -1.1327364 0.0651531 [361] 0.0651531 1.6276153 3.9458096 8.0281060 8.0281060 8.0281060 [367] 8.0281060 8.7197948 8.7197948 8.7197948 8.7197948 12.0339696 [373] 10.0858823 7.5772263 6.5987756 4.8808752 2.7281901 2.7281901 [379] 2.7281901 2.7281901 -0.4280920 -0.5052569 -1.6117814 -2.5593246 [385] -1.1439162 -1.2907062 -1.3236574 -1.3236574 -2.9813787 -3.7175263 [391] -3.6009068 -2.5871724 -1.3526877 NA NA NA [397] NA NA NA NA NA NA [403] NA NA NA NA NA NA [409] NA NA NA NA NA NA [415] NA NA NA NA NA NA [421] NA NA NA NA NA NA [427] NA NA NA NA NA NA [433] NA NA NA NA NA NA [439] NA NA NA NA NA NA [445] NA NA NA NA NA NA [451] NA NA NA NA NA NA [457] NA NA NA NA NA NA [463] NA NA NA NA NA NA [469] NA NA NA NA NA NA [475] NA NA NA NA NA NA [481] NA NA NA NA NA NA [487] NA NA NA NA NA NA [493] NA NA NA NA NA NA [499] NA NA NA NA NA NA [505] NA NA NA NA NA NA [511] NA NA NA NA NA NA [517] NA NA NA NA NA NA [523] NA NA NA NA NA NA [529] NA NA NA NA NA NA [535] NA NA NA NA NA NA [541] NA -1.3564265 -1.3564265 -1.3564265 -1.3564265 -0.9655563 [1] 47.61961 49.78465 51.89163 53.74147 55.87420 57.66570 59.30797 [8] 60.93674 62.53041 64.00556 65.77795 66.96042 68.18364 69.20958 [15] 69.89034 70.33550 70.50010 70.47787 70.50931 71.19400 71.92493 [22] 73.36740 74.81091 77.07975 78.61633 80.09940 82.54604 84.10290 [29] 85.18978 86.95169 88.10522 89.63783 91.68454 93.63717 95.63105 [36] 97.93722 100.13735 101.53292 102.88659 104.14341 105.60893 107.28987 [43] 108.78446 110.94167 112.74868 114.60067 116.32994 118.21136 120.01017 [50] 121.83706 123.63333 125.95865 127.97111 130.09532 132.40724 134.76753 [57] 136.65725 138.99530 140.50722 141.97416 143.31725 144.54354 145.75984 [64] 147.08216 148.33913 149.97949 151.59044 153.43854 155.90435 158.86740 [71] 162.53865 166.41974 171.50035 174.88161 177.20197 179.79896 182.91469 [78] 185.86922 188.78951 192.40081 195.33236 196.99241 198.60036 199.81647 [85] 200.96439 202.19935 203.50870 204.96958 206.42189 207.84765 209.11033 [92] 210.09934 211.04524 211.76569 212.41585 213.28013 214.17605 215.11117 [99] 216.09562 216.79633 217.51744 218.44261 219.77959 220.88889 221.95522 [106] 223.04657 224.07089 225.72039 227.20192 228.76855 230.40467 232.35012 [113] 234.31451 236.40080 238.48884 240.60443 242.53474 244.69584 246.91079 [120] 248.94294 250.78205 252.75039 254.73146 256.62231 258.50291 260.42507 [127] 262.10281 264.58535 266.44140 268.35055 270.26950 271.94047 273.99272 [134] 275.77772 277.65137 279.61825 281.41814 283.24996 285.08003 286.91400 [141] 288.67035 290.64223 292.39725 294.22996 295.87942 298.05420 299.70465 [148] 301.48073 303.62147 305.40501 307.27135 309.06200 310.80528 312.63539 [155] 313.81553 314.94296 315.96619 317.33031 318.41228 319.66579 320.80443 [162] 321.94666 323.09832 324.21528 325.31313 326.50191 327.66760 328.77448 [169] 330.00127 331.13150 332.25638 333.44632 334.61085 335.77460 336.90419 [176] 338.07792 339.02335 340.32155 341.69177 342.83624 343.94533 345.07719 [183] 346.22566 347.19648 348.34124 349.44606 350.58149 351.58482 352.77509 [190] 353.93759 355.02495 356.06201 357.10919 358.14682 359.20757 360.30428 [197] 361.31473 362.38216 363.29304 364.51781 365.64412 366.75881 367.78018 [204] 369.07683 370.12410 371.16023 372.22605 373.27655 374.29752 375.42135 [211] 376.42547 377.53153 378.51298 379.47177 380.64833 381.67936 382.61998 [218] 383.59704 384.53232 385.51384 386.53919 387.51915 388.49060 389.64844 [225] 390.66985 391.78228 392.79809 393.83317 394.84997 396.02372 396.96753 [232] 397.91459 398.88064 399.72492 400.80900 401.86211 402.84449 403.80246 [239] 404.80733 405.78769 406.62376 407.52717 408.41107 409.18125 410.15107 [246] 411.05045 412.02197 412.89122 413.71850 414.54296 415.34985 416.21379 [253] 416.99117 417.74639 418.59735 419.30533 419.91636 420.76102 421.43251 [260] 422.28040 423.07646 423.92563 425.02588 425.85467 426.57910 427.49958 [267] 428.35332 429.18992 430.09232 431.05184 431.89270 432.81420 433.81998 [274] 434.78573 435.76145 436.70820 437.67115 438.61625 439.67959 440.91411 [281] 441.83224 442.94771 443.99540 445.10951 446.15203 447.26295 448.24915 [288] 449.48987 450.57892 451.77223 452.88137 453.95125 455.27853 456.77432 [295] 457.95487 459.13623 460.38468 461.84956 462.96565 464.17449 465.31573 [302] 466.48399 467.62636 468.92164 470.12320 471.26910 472.39968 473.65171 [309] 474.85811 476.15577 477.48047 478.83568 480.17504 481.53773 482.93665 [316] 484.23068 485.58088 486.80835 487.86511 489.20508 490.32399 491.28094 [323] 492.40703 493.33254 494.20391 495.08019 495.89997 496.77723 497.62416 [330] 498.67054 499.51380 500.34172 501.11743 501.87792 502.64284 503.44717 [337] 504.17178 504.93645 505.65098 506.36777 507.07216 507.71029 508.31045 [344] 508.91831 509.53822 510.10492 510.66076 511.25385 511.83997 512.43349 [351] 512.98740 513.60204 514.10784 514.65757 515.30450 515.88602 516.47196 [358] 517.05373 517.56726 518.21835 518.82374 519.45081 520.05319 520.69344 [365] 521.33332 521.99361 522.54101 523.25030 523.91820 524.54110 525.16878 [372] 525.76608 526.33527 527.02151 527.65848 528.30427 528.97194 529.60896 [379] 530.29171 530.96358 531.74805 532.43146 533.11917 533.84792 534.43328 [386] 535.24713 535.90254 536.66352 537.24467 538.05590 538.83213 539.97470 [393] 540.79745 541.82248 542.38488 543.16231 543.87273 544.50749 545.29981 [400] 546.07639 546.83696 547.54822 548.27335 549.00193 549.67272 550.35787 [407] 551.18172 551.82757 552.58436 553.25845 553.93999 554.59543 555.18758 [414] 555.77902 556.29947 556.88584 557.39957 557.92552 558.35307 558.88693 [421] 559.33452 559.76904 560.23521 560.66767 561.10161 561.52967 561.96336 [428] 562.34066 562.80496 563.20266 563.59982 564.16030 564.60729 565.07996 [435] 565.51731 566.03386 566.54034 567.04093 567.51148 567.95029 568.42972 [442] 568.83565 569.32013 569.70571 570.12132 570.55894 570.95463 571.38390 [449] 571.81013 572.23569 572.61851 573.01649 573.44260 573.82207 574.26762 [456] 574.66236 575.06116 575.56116 575.99145 576.39051 576.84793 577.20782 [463] 577.64262 578.09686 578.56178 578.98397 579.45092 579.87526 580.31792 [470] 580.74239 581.13239 581.56636 581.93214 582.36782 582.70382 583.10820 [477] 583.50115 583.90164 584.30238 584.70122 585.13259 585.56102 586.05288 [484] 586.54006 586.86209 587.35236 587.91066 588.24740 588.80300 589.30267 [491] 589.66070 590.19608 590.61447 591.08912 591.53843 591.93417 592.39346 [498] 592.81423 593.22579 593.66565 594.08089 594.49227 594.88930 595.30799 [505] 595.69282 596.09925 596.58907 596.98286 597.50414 597.98785 598.42679 [512] 598.91397 599.37444 599.88806 600.35116 600.80586 601.22652 601.37210 [519] 601.71903 602.10318 602.48828 602.86895 603.21618 603.62360 603.99144 [526] 604.40793 604.84343 605.22994 605.70324 606.16081 606.49573 606.91718 [533] 607.31193 607.85744 608.28113 608.64035 609.08661 609.54322 609.82856 [540] 610.33123 610.62891 611.04368 611.42980 611.93015 612.37893 612.86197 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 38 O2 values from manual exclude period 293.457724 to 293.458747" [1] "Not reporting 38 APO values from manual exclude period 293.457724 to 293.458747" [1] "Not reporting 37 O2 values from manual exclude period 293.46045 to 293.461473" [1] "Not reporting 37 APO values from manual exclude period 293.46045 to 293.461473" [1] "Not reporting 75 O2 values from manual exclude period 293.472718 to 293.474763" [1] "Not reporting 75 APO values from manual exclude period 293.472718 to 293.474763" [1] "Not reporting 62 O2 values from manual exclude period 293.517019 to 293.518723" [1] "Not reporting 62 APO values from manual exclude period 293.517019 to 293.518723" [1] "Not reporting 37 O2 values from manual exclude period 293.519064 to 293.520086" [1] "Not reporting 37 APO values from manual exclude period 293.519064 to 293.520086" [1] "Not reporting 25 O2 values from manual exclude period 293.527924 to 293.528605" [1] "Not reporting 25 APO values from manual exclude period 293.527924 to 293.528605" [1] "Not reporting 37 O2 values from manual exclude period 293.665256 to 293.666278" [1] "Not reporting 37 APO values from manual exclude period 293.665256 to 293.666278" [1] "Not reporting 219 O2 values from manual exclude period 293.685 to 293.691" [1] "Not reporting 219 APO values from manual exclude period 293.685 to 293.691" [1] "Not reporting 89 smoothed O2 values from manual exclude period 293.457003077463 to 293.458041043274" [1] "Not reporting 89 smoothed APO values from manual exclude period 293.457003077463 to 293.458041043274" [1] "Not reporting 89 smoothed O2 values from manual exclude period 293.459748323819 to 293.460784858185" [1] "Not reporting 89 smoothed APO values from manual exclude period 293.459748323819 to 293.460784858185" [1] "Not reporting 175 smoothed O2 values from manual exclude period 293.472076146426 to 293.474101442658" [1] "Not reporting 175 smoothed APO values from manual exclude period 293.472076146426 to 293.474101442658" [1] "Not reporting 147 smoothed O2 values from manual exclude period 293.516297662575 to 293.518009020588" [1] "Not reporting 147 smoothed APO values from manual exclude period 293.516297662575 to 293.518009020588" [1] "Not reporting 88 smoothed O2 values from manual exclude period 293.518345106307 to 293.519374667644" [1] "Not reporting 88 smoothed APO values from manual exclude period 293.518345106307 to 293.519374667644" [1] "Not reporting 60 smoothed O2 values from manual exclude period 293.527232082125 to 293.52792295786" [1] "Not reporting 60 smoothed APO values from manual exclude period 293.527232082125 to 293.52792295786" [1] "Not reporting 87 smoothed O2 values from manual exclude period 293.664626436966 to 293.665631407911" [1] "Not reporting 87 smoothed APO values from manual exclude period 293.664626436966 to 293.665631407911" [1] "Not reporting 520 smoothed O2 values from manual exclude period 293.684351384521 to 293.690359834308" [1] "Not reporting 520 smoothed APO values from manual exclude period 293.684351384521 to 293.690359834308" [1] "Not reporting 89 smoothed O2 values from manual exclude period 293.457003077463 to 293.458041043274" [1] "Not reporting 89 smoothed APO values from manual exclude period 293.457003077463 to 293.458041043274" [1] "Not reporting 89 smoothed O2 values from manual exclude period 293.459748323819 to 293.460784858185" [1] "Not reporting 89 smoothed APO values from manual exclude period 293.459748323819 to 293.460784858185" [1] "Not reporting 175 smoothed O2 values from manual exclude period 293.472076146426 to 293.474101442658" [1] "Not reporting 175 smoothed APO values from manual exclude period 293.472076146426 to 293.474101442658" [1] "Not reporting 147 smoothed O2 values from manual exclude period 293.516297662575 to 293.518009020588" [1] "Not reporting 147 smoothed APO values from manual exclude period 293.516297662575 to 293.518009020588" [1] "Not reporting 88 smoothed O2 values from manual exclude period 293.518345106307 to 293.519374667644" [1] "Not reporting 88 smoothed APO values from manual exclude period 293.518345106307 to 293.519374667644" [1] "Not reporting 60 smoothed O2 values from manual exclude period 293.527232082125 to 293.52792295786" [1] "Not reporting 60 smoothed APO values from manual exclude period 293.527232082125 to 293.52792295786" [1] "Not reporting 87 smoothed O2 values from manual exclude period 293.664626436966 to 293.665631407911" [1] "Not reporting 87 smoothed APO values from manual exclude period 293.664626436966 to 293.665631407911" [1] "Not reporting 520 smoothed O2 values from manual exclude period 293.684351384521 to 293.690359834308" [1] "Not reporting 520 smoothed APO values from manual exclude period 293.684351384521 to 293.690359834308" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171020_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 110616 items [1] 10 2767 27654 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33762 [1] "Average Date / Time for slice RF10 = 2017-10-20 13:15:10.1446571350098" [1] "sum(lsel) = 2143" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -21.952 807.846 [1] -21.952 807.846 [1] 192.154 1021.952 [1] 0 999999 [1] "highestmid = 724.926" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF10 APO_AO2 range = -347.69,-318.62" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171020_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 110616 items [1] 10 2767 27654 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33773 [1] "Average Date / Time for slice RF10 = 2017-10-20 13:15:13.3488805294037" [1] "sum(lsel) = 2144" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -21.952 807.846 [1] -21.952 807.846 [1] 192.154 1021.952 [1] 0 999999 [1] "highestmid = 724.926" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF10 O2_AO2 range = -643.76,-601.28" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171020_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 110616 items [1] 10 2767 27654 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 34273 [1] "Average Date / Time for slice RF10 = 2017-10-20 13:17:50.530503988266" [1] "sum(lsel) = 2262" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -21.952 807.846 [1] -21.952 807.846 [1] 192.154 1021.952 [1] 0 999999 [1] "highestmid = 724.926" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF10 CO2_AO2 range = 401.31,408.17" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"