[1] "2025-05-13 16:19:15 MDT" options [1,] "file" "171008a" [2,] "flight" "RF05" [3,] "project" "ATOM3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "17" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "171008a" [1] "Reading in flight and plotting intervals" Read 22 records [1] "Reading in /scr/raf/stephens/AO2DAT/171008a.mr" Read 16196 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.37 seconds" [1] "New JOGEST = 2.37 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/171008a.hr" Read 64784 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 04:19:15 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30767 description: HS CO2 = 378.73 O2 = -553" [1] "position 2 cylinder OK30768 description: LS CO2 = 408.77 O2 = -698.3" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -583.3" [1] "position 4 cylinder OK30769 description: WT CO2 = 404.96 O2 = -714.5" [1] "position 5 cylinder OK30766 description: LP CO2 = 404.53 O2 = -782.9" [1] 378.7268 408.7706 393.4148 404.9563 404.5340 [1] -552.9940 -698.3318 -583.2991 -714.5493 -782.9400 [1] "Nominal linear calibrations:" [1] "co2scl = 1.049 co2off = -2.91 o2scla = -0.056 o2offa = -123.1" [1] "(dV/V)/(dXO2/XO2) = -3.761" [1] "(dV/V)/d(O2/N2) = -2.973" [1] "Reading in very high resolution timeseries" Read 323920 records [1] 323920 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:19:16 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:19:18 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -2.973" [1] "o2scaleavenew_drelVdrelP = -3.761" [1] "median(o2scalenew) = -3.005" [1] "Empirical dV/V vs dP/P relationship =-4.238, r^2 =0.601, damping =1.127" [1] "Tue May 13 04:19:18 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:20:07 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 6086655.237312 SECONDS" [1] "Tue May 13 04:20:07 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 3.5784 4.2603 [1] -3.178440 -2.669729 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -32022.727 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 15506.683 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 15515.747 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -24.918 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 48 [1] 66 [1] 110 [1] 110 [1] 111 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 70 281.7916 -320.151364 999748.4 -1 [2,] 134 281.7933 -212.787492 1000998.0 -1 [3,] 136 281.7934 5.667300 1001226.1 -1 [4,] 262 281.7968 -14.409316 1002849.9 -1 [5,] 452 281.8020 -442.226037 1004873.1 -1 [6,] 514 281.8037 -479.418264 1005489.8 -1 [7,] 515 281.8037 -226.454088 1005977.4 1 [8,] 516 281.8037 45.438111 1006045.5 -1 [9,] 768 281.8106 143.899942 1008378.5 -1 [10,] 769 281.8106 -129.897317 1008243.4 1 [11,] 770 281.8107 -412.323792 1007825.9 -1 [12,] 832 281.8124 -208.416709 1008568.7 -1 [13,] 1218 281.8228 -441.306967 1011672.5 -1 [14,] 1346 281.8263 93.853865 1009886.8 -1 [15,] 2434 281.8561 -201.663242 977979.9 -1 [16,] 2440 281.8562 -377.701761 977570.7 -1 [17,] 2504 281.8580 -53.143729 975316.5 -1 [18,] 3000 281.8716 -277.190021 957288.1 -1 [19,] 3001 281.8716 -495.457586 957483.2 1 [20,] 3002 281.8716 -532.321731 956754.0 -1 [21,] 3003 281.8716 -338.659326 957002.9 1 [22,] 3005 281.8717 -191.562364 956920.5 1 [23,] 3006 281.8717 -133.782764 956660.0 -1 [24,] 3007 281.8717 -145.869362 956671.1 1 [25,] 3718 281.8912 -214.505065 954257.0 -1 [26,] 3724 281.8914 -512.371466 953986.1 -1 [27,] 3788 281.8931 -41.280720 954544.7 -1 [28,] 5040 281.9274 -194.588977 955318.3 -1 [29,] 5110 281.9293 -498.888850 954728.9 -1 [30,] 5692 281.9452 -203.018385 947680.8 -1 [31,] 5698 281.9454 -476.082200 947411.7 -1 [32,] 5760 281.9471 -383.120438 947716.3 -1 [33,] 5762 281.9471 -49.287358 948020.6 -1 [34,] 7050 281.9824 -188.334826 972724.5 -1 [35,] 7118 281.9843 -479.318639 972818.1 -1 [36,] 7180 281.9860 -308.759476 972864.4 -1 [37,] 7182 281.9860 -16.336570 973116.3 -1 [38,] 8488 282.0218 -233.349956 983461.6 -1 [39,] 8494 282.0220 -538.480995 983242.1 -1 [40,] 8556 282.0237 -66.120140 984300.0 -1 [41,] 8618 282.0254 -214.832830 984305.6 -1 [42,] 10062 282.0649 -194.563214 1008694.9 -1 [43,] 10132 282.0669 -501.110694 1009355.1 -1 [44,] 10196 282.0686 -46.307635 1010122.6 -1 [45,] 10984 282.0901 -177.753137 1033311.8 -1 [46,] 10990 282.0903 -510.473867 1033105.2 -1 [47,] 11050 282.0920 -526.802698 1034135.2 -1 [48,] 11051 282.0920 -293.120617 1034691.1 1 [49,] 11052 282.0920 -59.057307 1034647.7 -1 [50,] 12502 282.1317 -179.542504 1060269.7 -1 [51,] 12570 282.1336 -184.784150 1059100.2 -1 [52,] 12572 282.1337 -492.541832 1058751.9 -1 [53,] 13714 282.1649 -233.728955 1033922.8 -1 [54,] 13782 282.1668 -255.687363 1036466.9 -1 [55,] 13784 282.1668 -22.426204 1036757.9 -1 [56,] 14958 282.1990 -204.049329 1060113.6 -1 [57,] 15028 282.2009 -477.892239 1059849.3 -1 [58,] 15628 282.2173 -227.332482 1061090.6 -1 [59,] 15903 282.2248 -496.418806 1060997.3 1 [60,] 15904 282.2248 151.428512 1061195.5 -1 [61,] 15905 282.2249 2835.938228 1061041.9 1 [62,] 15906 282.2249 1563.109348 1062924.0 -1 [63,] 15907 282.2249 -4740.110889 1061093.7 1 [64,] 15908 282.2249 8460.957250 1070433.0 -1 [65,] 15909 282.2250 60179.561294 1061160.7 1 [66,] 15910 282.2250 99324.733197 1181477.0 -1 [67,] 15911 282.2250 123656.830883 1061064.4 1 [68,] 15912 282.2250 102112.813213 1182947.0 -1 [69,] 15913 282.2251 104647.190716 1060608.5 1 [70,] 15914 282.2251 87885.949335 1182949.2 -1 [71,] 15915 282.2251 87578.724570 1073113.7 1 [72,] 15916 282.2252 76797.697072 1182987.3 -1 [73,] 15917 282.2252 81996.877646 1078895.9 1 [74,] 15918 282.2252 74635.978459 1182930.5 -1 [75,] 15919 282.2252 78981.442478 1082591.1 1 [76,] 15920 282.2253 72100.748885 1183029.8 -1 [77,] 15921 282.2253 75343.707467 1086853.1 1 [78,] 15922 282.2253 66251.801720 1183010.1 -1 [79,] 15923 282.2253 68204.527116 1095421.2 1 [80,] 15924 282.2254 65024.796486 1183182.9 -1 [81,] 15925 282.2254 70114.906089 1093137.9 1 [82,] 15926 282.2254 60437.542532 1182945.0 -1 [83,] 15927 282.2255 60742.999585 1104361.2 1 [84,] 15928 282.2255 59915.214230 1182845.1 -1 [85,] 15929 282.2255 67837.371183 1095789.2 1 [86,] 15930 282.2255 62502.499341 1183045.4 -1 [87,] 15931 282.2256 63842.440379 1100616.3 1 [88,] 15932 282.2256 60014.119372 1183211.2 -1 [89,] 15933 282.2256 64521.078083 1099844.6 1 [90,] 15934 282.2256 59552.864675 1183066.2 -1 [91,] 15935 282.2257 62561.057094 1101988.4 1 [92,] 15936 282.2257 60615.816594 1182982.8 -1 [93,] 15937 282.2257 64849.790795 1100117.2 1 [94,] 15938 282.2257 56475.263237 1182908.2 -1 [95,] 15939 282.2258 58838.883242 1099671.0 1 [96,] 15940 282.2258 57699.511380 1145389.3 -1 [97,] 15941 282.2258 40331.096537 1059611.1 1 [98,] 15942 282.2259 4591.589370 1059357.0 -1 [99,] 15943 282.2259 -7722.929051 1059498.6 1 [100,] 15944 282.2259 -1026.069332 1059984.0 -1 [101,] 15945 282.2259 2355.885468 1059943.8 1 [102,] 15946 282.2260 475.487970 1060279.2 -1 [103,] 15947 282.2260 -471.766548 1060306.7 1 [104,] 15948 282.2260 12.083024 1060567.6 -1 [105,] 15949 282.2260 257.280720 1060596.0 1 [106,] 15950 282.2261 113.110427 1060824.2 -1 [107,] 15951 282.2261 20.120609 1060852.3 1 [108,] 15952 282.2261 47.693458 1061046.6 -1 [109,] 15953 282.2262 64.855627 1061088.3 1 [110,] 16010 282.2277 -443.672319 1063280.1 -1 [111,] 16136 282.2311 -6.118091 1067480.2 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 2645 281.8618 9.687500e+24 [2,] 2736 281.8643 9.705976e+08 [3,] 15907 282.2249 3.765660e+02 [4,] 15908 282.2249 3.610980e+02 [5,] 15909 282.2250 3.538270e+02 [6,] 15910 282.2250 3.508290e+02 [7,] 15911 282.2250 3.369600e+02 [8,] 15912 282.2250 3.336690e+02 [9,] 15913 282.2251 3.206520e+02 [10,] 15914 282.2251 3.129160e+02 [11,] 15915 282.2251 2.888820e+02 [12,] 15940 282.2258 1.188070e+02 [13,] 15941 282.2258 4.967250e+02 [14,] 15942 282.2259 3.879340e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 129.529 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -59.305 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -59.287 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -24.918 PER MEG" [1] "Screened 35 O2 and CO2 values when pdsp not controlling" [1] "Screened 0 O2 values when pdo2 not controlling" [1] 378.7268 408.7706 393.4148 404.9563 404.5340 [1] -552.9940 -698.3318 -583.2991 -714.5493 -782.9400 [1] "Nominal linear calibrations:" [1] "co2scl = 1.048 co2off = -2.8 o2scla = -0.055 o2offa = -123.1" [1] "(dV/V)/(dXO2/XO2) = -3.775" [1] "(dV/V)/d(O2/N2) = -2.985" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.35 minutes" [1] "Shortest Cal: 0.08 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 50" [1] "at: 58" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-1HZ_DC8_20171008_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 595332 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-20Hz_DC8_20171008_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 17215692 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00785" [1] "HS CO2 vs. PACAB: m = -0.00743, r^2 = 0.42" [1] "LS CO2 vs. PACAB: m = -0.00828, r^2 = 0.52" [1] "HS+LS LIH2O vs. PACAB: m = -2.95e-05" [1] "HS LIH2O vs. PACAB: m = -3.88e-06, r^2 = 0" [1] "LS LIH2O vs. PACAB: m = -5.5e-05, r^2 = 0.1" [1] "HS+LS CO2 vs. LIH2O: m = 1.76" [1] "HS CO2 vs. LIH2O: m = -18.2, r^2 = 0.06" [1] "LS CO2 vs. LIH2O: m = 21.7, r^2 = 0.26" [1] "APCO2 vs. PACAB: m = -0.0155, r^2 = 0.19" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.112" [1] "HS O2 vs. PACAB: m = 0.136, r^2 = 0.43" [1] "LS O2 vs. PACAB: m = 0.0876, r^2 = 0.47" [1] "HS+LS O2 vs. LIH2O: m = 78.1" [1] "HS O2 vs. LIH2O: m = 353, r^2 = 0.07" [1] "LS O2 vs. LIH2O: m = -197, r^2 = 0.11" [1] "HS+LS O2 vs. PAO2: m = -7.31" [1] "HS O2 vs. PAO2: m = -9.95, r^2 = 0.89" [1] "LS O2 vs. PAO2: m = -4.67, r^2 = 0.56" [1] "HS+LS O2 vs. TPBOX: m = 2.46" [1] "HS O2 vs. TPBOX: m = 3.42, r^2 = 0.71" [1] "LS O2 vs. TPBOX: m = 1.51, r^2 = 0.5" [1] "APO vs. PACAB: m = 0.255, r^2 = 0.19" [1] "APO vs. PAO2: m = -15, r^2 = 0.45" [1] "APO vs. TPBOX: m = 4.86, r^2 = 0.48" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.323, r^2 = 0.18" [1] "LS CO2 vs. LiCor Cell P: m = -0.309, r^2 = 0.13" [1] "HS CO2 vs. CO2 Vol P: m = 0.528, r^2 = 0.45" [1] "LS CO2 vs. CO2 Vol P: m = 0.499, r^2 = 0.37" [1] "HS CO2 vs. SLOPE: m = -0.177, r^2 = 0.01" [1] "LS CO2 vs. SLOPE: m = -0.277, r^2 = 0.01" [1] "HS O2 vs. O2 Vol P: m = -8.9, r^2 = 0.66" [1] "LS O2 vs. O2 Vol P: m = -4.3, r^2 = 0.33" [1] "HS O2 vs. O2 Cell T: m = 4.36, r^2 = 0.5" [1] "LS O2 vs. O2 Cell T: m = 2.64, r^2 = 0.39" [1] "HS O2 vs. CO2 Vol P: m = -10.2, r^2 = 0.46" [1] "LS O2 vs. CO2 Vol P: m = -2.74, r^2 = 0.08" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.724, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -1.07, r^2 = 0.03" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -10.2, r^2 = 0.46" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -2.74, r^2 = 0.08" [1] "HS O2 vs. LIH2O: m = 493, r^2 = 0.13" [1] "LS O2 vs. LIH2O: m = -24, r^2 = 0" [1] "HS O2 vs. SLOPE: m = 0.0637, r^2 = 0" [1] "LS O2 vs. SLOPE: m = -0.671, r^2 = 0.25" [1] "HS CO2 vs. Time: m = 13.551, r^2 = 0.79" [1] "LS CO2 vs. Time: m = 13.687, r^2 = 0.8" [1] "HS CO2 vs. Cylinder T: m = 0.862, r^2 = 0.08" [1] "LS CO2 vs. Cylinder T: m = 0.917, r^2 = 0.079" [1] "HS CO2 vs. Regulator T: m = -0.242, r^2 = 0.53" [1] "LS CO2 vs. Regulator T: m = -0.252, r^2 = 0.5" [1] "HS CO2 vs. Ref. Volumes T: m = -0.376, r^2 = 0.48" [1] "LS CO2 vs. Ref. Volumes T: m = -0.401, r^2 = 0.427" [1] "HS CO2 vs. Manifold T: m = -0.253, r^2 = 0.73" [1] "LS CO2 vs. Manifold T: m = -0.267, r^2 = 0.689" [1] "HS CO2 vs. Pump Box T: m = -0.178, r^2 = 0.69" [1] "LS CO2 vs. Pump Box T: m = -0.168, r^2 = 0.63" [1] "HS O2 vs. Cylinder T: m = -21.021, r^2 = 0.13" [1] "LS O2 vs. Cylinder T: m = -16.028, r^2 = 0.176" [1] "HS O2 vs. Regulator T: m = 3.934, r^2 = 0.38" [1] "LS O2 vs. Regulator T: m = 2.087, r^2 = 0.249" [1] "HS O2 vs. Ref. Volumes T: m = 5.438, r^2 = 0.27" [1] "LS O2 vs. Ref. Volumes T: m = 3.359, r^2 = 0.218" [1] "HS O2 vs. Manifold T: m = 4.165, r^2 = 0.55" [1] "LS O2 vs. Manifold T: m = 2.505, r^2 = 0.442" [1] "HS O2 vs. Pump Box T: m = 2.97, r^2 = 0.53" [1] "LS O2 vs. Pump Box T: m = 1.597, r^2 = 0.413" [1] "HS CO2 vs. WT P: m = -0.007, r^2 = 0.34" [1] "LS CO2 vs. WT P: m = -0.008, r^2 = 0.406" [1] "HS CO2 vs. SP P: m = -0.0077, r^2 = 0.45" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.011, r^2 = 0.39" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.019, r^2 = 0.39" [1] "LS CO2 vs. SP P: m = -0.00775, r^2 = 0.45" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.022, r^2 = 0.45" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.013, r^2 = 0.45" [1] "HS CO2 vs. WT FL: m = -0.115, r^2 = 0.11" [1] "LS CO2 vs. WT FL: m = -0.228, r^2 = 0.201" [1] "HS CO2 vs. SP FL: m = 0.132, r^2 = 0.35" [1] "LS CO2 vs. SP FL: m = 0.129, r^2 = 0.367" [1] "HS O2 vs. SLPDIFF: m = 0.959, r^2 = 0.3" [1] "LS O2 vs. SLPDIFF: m = 0.71, r^2 = 0.337" [1] "HS O2 vs. WT P: m = 0.142, r^2 = 0.39" [1] "LS O2 vs. WT P: m = 0.087, r^2 = 0.349" [1] "HS O2 vs. SP P: m = 0.152, r^2 = 0.42" [1] "LS O2 vs. SP P: m = 0.101, r^2 = 0.47" [1] "HS O2 vs. WT FL: m = 2.645, r^2 = 0.16" [1] "LS O2 vs. WT FL: m = 1.311, r^2 = 0.048" [1] "HS O2 vs. SP FL: m = -2.19, r^2 = 0.26" [1] "LS O2 vs. SP FL: m = -0.226, r^2 = 0.008" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 50.78, 51.02" [1] "Empirical LP O2 lag flow(s): 102.9, 95.9" [1] "Empirical LP CO2 lag time(s): 84.22, 44.02" [1] "Empirical LP CO2 lag flow(s): 102.9, 95.9" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.4" [1] "Median all HS CO2 SD = 0.39" [1] "Median all LS CO2 SD = 0.41" [1] "Median all LT CO2 SD = 0.39" [1] "Median all WT CO2 SD = 0.4" [1] "Median all HS or LS CO2 SD = 0.4" [1] "Median all cal O2 SD = 1.48" [1] "Median all HS O2 SD = 1.15" [1] "Median all LS O2 SD = 1.51" [1] "Median all LT O2 SD = 1.25" [1] "Median all WT O2 SD = 1.29" [1] "Median all HS or LS O2 SD = 1.38" [1] "Median all cal CO2 Slope = 0" [1] "Median all HS CO2 Slope = -0.04" [1] "Median all LS CO2 Slope = -0.04" [1] "Median all LT CO2 Slope = 0" [1] "Median all WT CO2 Slope = 0.03" [1] "Median all HS or LS CO2 Slope = -0.04" [1] "Median all cal O2 Slope = -0.03" [1] "Median all HS O2 Slope = 0.04" [1] "Median all LS O2 Slope = -0.02" [1] "Median all LT O2 Slope = 0.16" [1] "Median all WT O2 Slope = 0.36" [1] "Median all HS or LS O2 Slope = 0" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 6.9 per meg" [1] "Initial O2 Calibration Offset = -8.03 per meg" [1] "SD of O2 Calibration (post-takeoff) = 5.82 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -10.34 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -13.9 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 68226.62 106504.07" [1] "Time lag adjustments = 17 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 61.8 at 101.1 sccm" [1] "Median O2 delay + tlagff = 62.5 at 101.1 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 59.9 at 101.1 sccm" [1] "Median O2 delay from 3-way + tlagff = 60.7 at 101.1 sccm" [1] "after calc and ff lag: 68160.73 106434.59" [1] "2025-05-13 16:21:03 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 11.148528402 8.082994340 11.357668436 11.357668436 10.874814121 [6] 9.684345572 5.509209711 5.509209711 0.980066009 0.916930592 [11] -0.777908418 3.469711165 3.469711165 3.469711165 2.376054778 [16] -0.023472236 -0.023472236 -0.023472236 -0.023472236 -0.609353954 [21] 1.283454316 2.265856669 2.647949723 9.829573804 10.045691182 [26] 9.643255197 4.472899328 6.384881291 6.384881291 6.384881291 [31] 6.404766887 4.355730941 2.739854971 2.739854971 2.739854971 [36] 2.947019727 5.846783320 5.918736430 5.905162525 5.949756834 [41] 1.795537137 1.807523214 1.970361150 2.138632947 -1.035985340 [46] -0.804866795 -0.513548102 -0.272472022 9.471351247 10.507142166 [51] 10.721000627 10.865683788 1.502055981 -0.834986250 -0.752139783 [56] -0.580364069 0.204314538 2.898282513 3.125763988 3.387714182 [61] 3.868357808 8.817774777 9.465957401 10.070232870 10.688554388 [66] 12.361382884 12.361382884 9.701575765 7.010925417 3.576580645 [71] 3.431726708 2.953011782 0.072625508 -1.032137056 1.375338497 [76] 1.366746333 1.363493094 1.359062110 -8.266677848 -8.360969475 [81] -8.528419966 -8.594752188 -4.999970181 -4.999970181 -4.755335610 [86] -3.488094937 -1.731513343 -1.453991631 -1.453991631 -1.453991631 [91] 0.017583385 -1.750541934 -1.750541934 -0.633454014 -0.141705353 [96] -1.425584670 -1.690286237 -2.870580984 -3.045021159 -4.842918570 [101] -6.598930158 -6.637250660 -6.637250660 8.421192691 8.421192691 [106] 8.421192691 7.024388428 -1.379182435 -1.613990700 -1.613990700 [111] -1.613990700 3.597575754 4.891885785 4.891885785 4.891885785 [116] 3.778079398 -2.973090686 -2.934154140 -2.499637442 -2.067457667 [121] -0.012466401 0.352801674 0.352801674 0.352801674 -1.217197952 [126] -0.534107548 -0.402620033 -0.402620033 0.296795476 -0.346012299 [131] -0.346012299 1.521527132 -1.178094827 -1.425281579 -2.061509634 [136] -4.062245710 -2.000902306 1.442134462 1.442134462 1.442134462 [141] -0.656618199 2.992179568 2.992179568 2.992179568 2.992179568 [146] 9.336531468 9.885493519 9.994564975 9.994564975 5.777369567 [151] 5.777369567 5.777369567 9.711341415 13.307299532 15.174639618 [156] 15.350051913 15.350051913 13.433944146 11.461267050 7.235658804 [161] 2.977388693 2.923242740 2.042101902 2.042101902 -0.305599267 [166] -2.376784549 -14.229552817 -14.229552817 -14.229552817 -12.556670717 [171] 3.361781497 3.361781497 3.361781497 3.361781497 7.185322719 [176] 7.919150025 7.361047784 6.831340124 2.422342775 -5.783987699 [181] -5.783987699 -5.783987699 -5.761467800 -4.838032888 -5.502181769 [186] -5.537026191 -5.537026191 -5.862293238 -5.862293238 -5.862293238 [191] -5.862293238 -6.169312187 -5.767044283 -5.337265040 -5.061606521 [196] -4.491995002 -3.710246654 -3.710246654 -3.710246654 -3.709640807 [201] -3.687151089 -3.687151089 -6.030833512 -7.279508270 -18.519552119 [206] -18.519552119 -18.519552119 -16.174962777 0.461588059 0.462197582 [211] 0.462197582 0.358081409 4.182700077 1.793242805 1.780837582 [216] 1.780837582 1.292225208 1.171967968 1.171967968 1.171967968 [221] -0.167910984 -4.708537517 -4.433033423 -4.123950445 -3.956893255 [226] -10.954766703 -10.954766703 -10.954766703 -10.954766703 -9.669372823 [231] -9.669372823 -9.669372823 -9.669372823 -0.018517681 -0.968651212 [236] -1.786126282 -2.111576731 -3.197087808 -3.865036859 -3.865036859 [241] -3.939034113 -4.060160317 -5.504896577 -5.858098895 -5.858098895 [246] -5.858098895 -14.848197114 -13.876669377 -8.304991530 -6.973972371 [251] 8.262252534 8.262252534 8.262252534 8.262252534 1.689816580 [256] -2.320915192 -2.320915192 -2.320915192 -3.912038132 -6.844365890 [261] -6.844365890 -7.689360576 -8.694083151 -4.560448941 -4.799282556 [266] -4.951760847 -4.951760847 -0.013250591 -0.013250591 -0.007350387 [271] 0.007499358 -8.785400112 -10.689841138 -10.689841138 -10.689841138 [276] -9.472037601 -6.670461397 -9.967125914 -11.292058527 -11.292058527 [281] -4.670362821 -4.614654212 0.206273624 3.513963973 1.123877138 [286] 1.123877138 1.123877138 1.123877138 4.300703673 1.840343215 [291] -0.322285881 -0.322285881 -10.322535751 -10.322535751 -10.322535751 [296] -10.322535751 -9.167915284 -7.268187945 -7.268187945 -7.268187945 [301] -7.268187945 5.086677345 5.086677345 6.148978450 7.710496936 [306] -2.135241181 0.268983218 1.503526024 2.175080076 -4.225823626 [311] -4.211518156 -4.211518156 -4.211518156 1.013152094 3.131432438 [316] -0.268794212 -4.825060835 -5.157001754 -7.308688078 -7.308688078 [321] -6.528012954 -5.164231801 0.640744438 0.640744438 0.640744438 [326] 0.640744438 -2.652013764 -1.726632808 -1.726632808 -1.726632808 [331] 3.798435086 8.397037020 8.528681426 8.652752784 5.394479933 [336] 4.509294939 4.590236825 4.590236825 4.874334758 6.465042202 [341] 6.465042202 6.465042202 6.465042202 -4.385910594 -4.385910594 [346] -5.259048264 -6.742419641 -2.640516993 -2.640516993 -2.640516993 [351] -2.640516993 -1.071205110 1.375378275 1.312863321 1.146595604 [356] 1.123799294 0.311253525 0.311253525 0.311253525 0.311253525 [361] 2.467546876 2.301119487 2.301119487 2.301119487 4.406997942 [366] 4.406997942 4.406997942 4.406997942 -4.623757397 -4.384011411 [371] -4.115212784 -3.880851167 -1.501080948 1.122547661 1.307808594 [376] 1.400377259 1.400377259 -1.163228282 -1.163228282 -1.163228282 [381] -1.163228282 -8.495739883 -8.495739883 -8.777260051 -9.194508034 [386] -2.080811336 -2.080811336 -2.080811336 -2.080811336 2.019916824 [391] 3.295528209 3.295528209 2.478660740 1.039606668 -0.126535764 [396] -0.126535764 -0.126535764 -0.126535764 -5.057198701 -5.057198701 [401] -5.138802923 -5.344391423 -6.157344576 -6.180603330 -6.200479146 [406] -6.200479146 -5.178714895 -5.039673860 -4.429950346 -2.564930210 [411] 5.779092038 7.344731695 7.722522004 7.722522004 4.662934362 [416] -2.899261907 -2.899261907 -2.899261907 -2.790804549 -3.838595167 [421] -3.692348816 -3.692348816 -3.692348816 13.622029946 13.622029946 [426] 13.622029946 13.622029946 3.654312051 2.048723305 2.048723305 [431] 2.048723305 2.735293961 6.145405053 6.143535963 6.143535963 [436] 6.143535963 4.567602358 4.567602358 4.567602358 4.567602358 [441] 1.602551508 1.602551508 -0.891303875 -4.183469860 -14.669964809 [446] -14.669964809 -14.669964809 -14.669964809 -10.075984854 -8.252618464 [451] -7.882798931 -7.394629029 -6.444952863 -0.401242536 -0.401242536 [456] -0.401242536 1.653101454 0.138834789 0.138834789 0.138834789 [461] 0.138834789 -2.971595688 -6.448552592 -7.052913204 -7.052913204 [466] -7.548895622 -9.415016992 -10.659327033 -10.659327033 -7.785014849 [471] -5.108965328 -3.544997948 -2.584680061 -2.797175075 -5.827865809 [476] -5.560266708 -4.849244790 -4.133314872 6.285143319 6.285143319 [1] 53.21303 54.41008 56.47106 57.92610 60.04436 62.13949 64.61695 [8] 66.42825 68.84405 71.06289 73.43833 75.31540 77.05072 78.49201 [15] 80.15107 81.40914 82.40382 83.55159 84.67427 85.86646 87.25614 [22] 88.35162 89.50722 90.73916 92.17512 93.30489 94.66667 96.29714 [29] 97.69408 99.08477 100.38662 101.82111 103.48815 104.85866 106.03496 [36] 106.94709 107.78767 108.05320 108.00311 108.16768 108.06200 108.10623 [43] 108.70716 109.32815 110.08649 110.93940 112.01447 112.90413 114.08742 [50] 114.67281 115.46202 115.99595 116.26311 116.47201 116.77774 117.41166 [57] 118.32036 119.23481 120.07430 121.04099 122.81474 124.90473 127.29676 [64] 129.52675 131.80858 134.96931 138.13054 141.01920 144.24251 146.84305 [71] 148.70665 150.09558 151.51627 152.12152 153.02145 153.06002 153.07462 [78] 153.09451 153.35576 153.77906 154.53079 155.36114 156.81650 158.29380 [85] 160.43699 162.47231 164.63981 166.65275 169.33178 171.56606 174.29158 [92] 177.01916 180.60945 183.44445 187.24163 190.20191 193.40703 196.83260 [99] 199.86587 203.58360 207.52382 210.64451 214.56884 217.85341 220.39722 [106] 222.97888 224.97543 226.41937 227.82300 228.64130 229.85048 230.58026 [113] 231.22921 231.76414 232.33223 232.78248 233.40381 234.06159 235.17028 [120] 236.26309 237.68869 239.13485 241.32223 243.06451 245.37052 247.58075 [127] 250.15410 252.55636 255.48439 258.95944 261.80966 265.06004 267.95245 [134] 270.74797 273.42317 275.36773 278.29163 280.02720 282.23626 283.90624 [141] 285.66770 287.24332 288.61773 290.31025 291.79322 293.05393 294.53005 [148] 295.64502 297.05147 298.18150 299.55642 300.71008 302.26942 303.73515 [155] 305.20053 306.71388 308.09339 309.45549 310.93773 312.52890 314.12262 [162] 316.19937 317.87715 319.66663 321.46335 323.14258 324.84070 326.34687 [169] 327.93766 329.41115 330.99735 332.20977 333.33714 334.65999 335.81593 [176] 337.10148 338.32789 339.61099 340.93033 342.55950 344.03633 345.35849 [183] 346.77302 348.06750 349.53630 350.67489 351.71579 352.56093 353.57620 [190] 354.35113 355.13347 355.93125 356.62838 357.25608 357.84233 358.48959 [197] 359.09155 359.75357 360.47914 361.31023 362.34848 363.53036 364.91399 [204] 366.37400 368.10725 370.15409 371.96361 373.78220 375.73723 377.67765 [211] 379.49220 381.03097 382.43154 383.56523 384.77618 385.69238 386.70495 [218] 387.61447 388.37769 389.01122 389.68190 390.16315 390.63146 391.15685 [225] 391.62598 392.11841 392.62988 393.17785 393.74661 394.37584 395.20840 [232] 395.89423 396.68437 397.48504 398.43561 399.41104 400.60651 401.79653 [239] 403.14637 404.37123 405.66697 406.82981 408.13425 409.37581 410.72518 [246] 411.87932 413.53499 414.74612 416.09542 417.33531 418.58865 419.86265 [253] 421.12396 422.27825 423.60278 424.74705 426.02700 426.92560 427.80015 [260] 428.67835 429.57286 430.34159 431.16781 431.97944 432.74236 433.57313 [267] 434.44872 435.22659 436.23619 437.23885 438.35276 439.44587 440.74692 [274] 441.91173 443.19999 444.39967 445.59571 446.97650 448.39518 449.72699 [281] 451.19759 452.67756 453.91157 455.29335 456.44504 457.48770 458.59375 [288] 459.50488 460.39161 461.15431 461.89403 462.51688 463.33189 463.91108 [295] 464.50410 465.00557 465.42048 465.77254 466.11368 466.36922 466.66190 [302] 466.94061 467.25519 467.59281 467.96563 468.30973 468.88373 469.43667 [309] 470.03607 470.75364 471.49749 472.38620 473.39007 474.37749 475.50061 [316] 476.60724 477.78545 479.15286 480.56331 481.92074 483.36010 484.63998 [323] 485.98786 487.21175 488.54256 489.58641 490.93312 492.06533 493.22762 [330] 494.33780 495.24468 496.32143 497.32726 498.12295 498.85173 499.49301 [337] 500.09760 500.68255 501.27788 501.79285 502.35605 502.87621 503.47640 [344] 504.02640 504.70657 505.32541 506.06589 506.87136 507.58665 508.39283 [351] 509.28772 510.10849 511.08333 512.11424 513.17377 514.13514 515.08070 [358] 516.36520 517.44199 518.26062 519.27708 520.06167 520.95680 521.64580 [365] 522.32867 522.92335 523.60751 524.13391 524.79000 525.28442 525.83875 [372] 526.33730 526.77400 527.29072 527.80972 528.28605 528.70448 529.13383 [379] 529.66762 530.19254 530.74966 531.43316 532.07528 532.96924 533.69101 [386] 534.35131 535.15304 535.89659 536.65238 537.33882 538.01584 538.68315 [393] 539.42689 540.17702 540.95379 541.72787 542.56152 543.26586 544.03145 [400] 544.75297 545.52542 546.22864 546.94272 547.73195 548.53198 549.41823 [407] 550.25646 551.13611 552.10745 552.83197 553.80064 554.52532 555.38830 [414] 556.07777 556.93777 557.55051 558.36391 559.14839 559.90232 560.64017 [421] 561.37257 562.00567 562.64230 563.13994 563.59189 563.97002 564.37570 [428] 564.69474 565.01581 565.36217 565.90401 566.30028 566.84733 567.37377 [435] 567.89095 568.26854 568.72813 569.15199 569.72302 570.38221 570.98661 [442] 571.58557 572.37558 573.10897 573.94263 574.60095 575.59291 576.36652 [449] 577.30294 578.21939 579.23606 580.21738 581.28806 582.29349 583.31581 [456] 584.24206 585.27421 586.29753 587.29178 588.55027 589.68268 590.71621 [463] 591.94696 593.22697 594.60433 595.72076 597.18609 598.88107 600.06404 [470] 601.45770 602.76276 603.91207 605.27593 606.42860 607.72422 608.67102 [477] 609.77816 610.88442 611.99885 612.85101 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 58 O2 values from manual exclude period 282.168146 to 282.169741" [1] "Not reporting 58 APO values from manual exclude period 282.168146 to 282.169741" [1] "Not reporting 135 smoothed O2 values from manual exclude period 282.167485886426 to 282.169044457837" [1] "Not reporting 135 smoothed APO values from manual exclude period 282.167485886426 to 282.169044457837" [1] "Not reporting 135 smoothed O2 values from manual exclude period 282.167485886426 to 282.169044457837" [1] "Not reporting 135 smoothed APO values from manual exclude period 282.167485886426 to 282.169044457837" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171008_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 132296 items [1] 5 3309 33074 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33781 [1] "Average Date / Time for slice RF05 = 2017-10-09 00:37:25.4074611663818" [1] "sum(lsel) = 2761" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -6.551 812.119 [1] -6.551 812.119 [1] 187.881 1006.551 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 712.621" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF05 APO_AO2 range = -372.73,-332.28" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171008_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 132296 items [1] 5 3309 33074 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33789 [1] "Average Date / Time for slice RF05 = 2017-10-09 00:37:25.4074611663818" [1] "sum(lsel) = 2761" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -6.551 812.119 [1] -6.551 812.119 [1] 187.881 1006.551 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 712.621" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF05 O2_AO2 range = -652.87,-618.38" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171008_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 132296 items [1] 5 3309 33074 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 34279 [1] "Average Date / Time for slice RF05 = 2017-10-09 00:37:32.1472392082214" [1] "sum(lsel) = 2771" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -6.551 812.119 [1] -6.551 812.119 [1] 187.881 1006.551 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 712.621" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF05 CO2_AO2 range = 402.11,407.26" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 51 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"