[1] "2025-05-13 16:10:48 MDT" options [1,] "file" "171001a" [2,] "flight" "RF02" [3,] "project" "ATOM3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "17" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "171001a" [1] "Reading in flight and plotting intervals" Read 20 records [1] "Reading in /scr/raf/stephens/AO2DAT/171001a.mr" Read 17707 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.37 seconds" [1] "New JOGEST = 2.37 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/171001a.hr" Read 70828 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 04:10:49 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30767 description: HS CO2 = 378.73 O2 = -553.2" [1] "position 2 cylinder OK30768 description: LS CO2 = 408.77 O2 = -698.5" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.42 O2 = -583.2" [1] "position 4 cylinder OK30766 description: WT CO2 = 404.53 O2 = -782.9" [1] "position 5 cylinder OK30769 description: LP CO2 = 404.95 O2 = -714.7" [1] 378.7255 408.7686 393.4153 404.5340 404.9508 [1] -553.2191 -698.5062 -583.1895 -782.9400 -714.6838 [1] "Nominal linear calibrations:" [1] "co2scl = 1.052 co2off = -7.82 o2scla = -0.054 o2offa = -134.3" [1] "(dV/V)/(dXO2/XO2) = -3.846" [1] "(dV/V)/d(O2/N2) = -3.04" [1] "Reading in very high resolution timeseries" Read 354140 records [1] 354140 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 04:10:50 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 04:10:52 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.04" [1] "o2scaleavenew_drelVdrelP = -3.846" [1] "median(o2scalenew) = -3.07" [1] "Empirical dV/V vs dP/P relationship =-4.193, r^2 =0.273, damping =1.09" [1] "Tue May 13 04:10:53 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1596 $icochar [1] "0" "0" "26:05:27" "15:53:00" "274.747673" [6] "274.797883" "274.795561" "274.684982" "274.686433" "274.670752" [11] "274.711378" "274.741847" "274.766223" "274.782763" "274.807429" [16] "274.849216" "274.866917" "274.926695" "274.999242" "275.050024" $ecochar [1] "367" "15:53:00" "367" "26:05:27" "274.748834" [6] "274.799334" "274.796432" "274.686143" "274.687304" "274.711378" [11] "274.741847" "274.766223" "274.782763" "274.807429" "274.826291" [16] "274.866917" "274.926695" "274.999242" "275.050024" "275.088328" $flag [1] "all" "LP" "LP" "flight" [5] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [9] "donotreporto2" "a" "b" "c" [13] "d" "e" "f" "g" [17] "h" "i" "j" "k" $ico2 [1] 0.0000 0.0000 275.0871 274.6618 274.7477 274.7979 274.7956 274.6850 [9] 274.6864 274.6708 274.7114 274.7418 274.7662 274.7828 274.8074 274.8492 [17] 274.8669 274.9267 274.9992 275.0500 $eco2 [1] 367.0000 274.6618 367.0000 275.0871 274.7488 274.7993 274.7964 274.6861 [9] 274.6873 274.7114 274.7418 274.7662 274.7828 274.8074 274.8263 274.8669 [17] 274.9267 274.9992 275.0500 275.0883 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1595 1595 274.6618 8.037894 -0.00126250 -0.00118120 -0.00118120 1595 1596 1596 274.6618 8.035938 -0.00110135 -0.00113780 -0.00113780 1596 1597 1597 274.6618 8.037375 -0.00101855 -0.00105885 -0.00105885 1597 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1595 10.5 6.00 16.00 4890.50 1 8.037929 8.037414 1596 10.5 2.25 16.75 1231.75 -1 8.035922 8.035473 1597 10.5 1.00 17.00 25.50 1 8.037358 8.036942 vuvsigpdprcorr 1595 8.037896 1596 8.035937 1597 8.037374 [1] 0.6617823 0.6618102 0.6618373 [,1] [,2] [,3] [1,] 0.661794 1 6 [2,] 0.661804 -1 6 [3,] 0.661810 -1 1 [4,] 0.661816 -1 1 [5,] 0.661822 -1 1 [6,] 0.661831 1 1 [7,] 0.661837 1 1 [8,] 0.661843 1 1 [9,] 0.661849 1 1 [10,] 0.661858 -1 1 [11,] 0.661864 -1 1 [12,] 0.661870 -1 1 [13,] 0.661876 -1 1 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1596 $icochar [1] "0" "0" "26:05:27" "15:53:00" "274.747673" [6] "274.797883" "274.795561" "274.684982" "274.686433" "274.670752" [11] "274.711378" "274.741847" "274.766223" "274.782763" "274.807429" [16] "274.849216" "274.866917" "274.926695" "274.999242" "275.050024" $ecochar [1] "367" "15:53:00" "367" "26:05:27" "274.748834" [6] "274.799334" "274.796432" "274.686143" "274.687304" "274.711378" [11] "274.741847" "274.766223" "274.782763" "274.807429" "274.826291" [16] "274.866917" "274.926695" "274.999242" "275.050024" "275.088328" $flag [1] "all" "LP" "LP" "flight" [5] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [9] "donotreporto2" "a" "b" "c" [13] "d" "e" "f" "g" [17] "h" "i" "j" "k" $ico2 [1] 0.0000 0.0000 275.0871 274.6618 274.7477 274.7979 274.7956 274.6850 [9] 274.6864 274.6708 274.7114 274.7418 274.7662 274.7828 274.8074 274.8492 [17] 274.8669 274.9267 274.9992 275.0500 $eco2 [1] 367.0000 274.6618 367.0000 275.0871 274.7488 274.7993 274.7964 274.6861 [9] 274.6873 274.7114 274.7418 274.7662 274.7828 274.8074 274.8263 274.8669 [17] 274.9267 274.9992 275.0500 275.0883 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1595 1595 274.6618 8.037894 -0.00126250 -0.00118120 -0.00118120 1595 1596 1596 274.6618 8.035938 -0.00110135 -0.00113780 -0.00113780 1596 1597 1597 274.6618 8.037375 -0.00101855 -0.00105885 -0.00105885 1597 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1595 10.5 6.00 16.00 4890.50 1 8.037929 8.037414 1596 10.5 2.25 16.75 1231.75 -1 8.035922 8.035473 1597 10.5 1.00 17.00 25.50 1 8.037358 8.036942 vuvsigpdprcorr 1595 8.037896 1596 8.035937 1597 8.037374 [1] 0.6617823 0.6618102 0.6618373 [,1] [,2] [,3] [1,] 0.661794 1 6 [2,] 0.661804 -1 6 [3,] 0.661810 -1 1 [4,] 0.661816 -1 1 [5,] 0.661822 -1 1 [6,] 0.661831 1 1 [7,] 0.661837 1 1 [8,] 0.661843 1 1 [9,] 0.661849 1 1 [10,] 0.661858 -1 1 [11,] 0.661864 -1 1 [12,] 0.661870 -1 1 [13,] 0.661876 -1 1 [1] "JOGAVES DOES NOT MATCH" [1] "Plotting Jog Shapes" [1] "Tue May 13 04:11:51 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 04:11:51 PM MDT 2025 done recreating mr o2diffs" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 3.7609 4.2468 [1] -3.17648 -2.81305 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 472.718 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 848.573 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 846.222 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 19.912 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 14 [1] 26 [1] 77 [1] 77 [1] 78 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 274.6186 40.298333 1014499.1 1 [2,] 2 274.6187 -320.452558 1014340.4 -1 [3,] 3 274.6187 -448.821334 1014779.7 1 [4,] 6 274.6188 -24.630173 1014803.0 -1 [5,] 70 274.6205 -25.183369 1015564.6 -1 [6,] 71 274.6205 -317.887103 1015605.5 1 [7,] 72 274.6205 -625.194112 1014973.1 -1 [8,] 136 274.6223 -313.094919 1015739.3 -1 [9,] 202 274.6241 -533.245477 1016003.6 -1 [10,] 266 274.6257 -401.827946 1016726.0 -1 [11,] 472 274.6312 -664.957354 1018083.1 -1 [12,] 540 274.6330 -294.851798 1018658.7 -1 [13,] 782 274.6396 -594.003443 1018480.0 -1 [14,] 846 274.6414 -366.053279 1018546.4 -1 [15,] 1201 274.6510 -136.456210 1018181.8 1 [16,] 1202 274.6510 -228.048737 1018140.6 -1 [17,] 1203 274.6511 -279.395095 1018522.0 1 [18,] 1230 274.6518 -664.107111 1017825.7 -1 [19,] 1286 274.6533 -781.045145 1017486.5 -1 [20,] 1358 274.6553 -314.742713 1017968.9 -1 [21,] 2698 274.6920 -502.933880 986521.1 -1 [22,] 2704 274.6921 -654.761580 986167.3 -1 [23,] 2768 274.6939 -286.982400 984121.6 -1 [24,] 2894 274.6973 27.837684 979494.9 -1 [25,] 2895 274.6973 -193.327569 979423.4 1 [26,] 2896 274.6974 -420.309719 978955.9 -1 [27,] 3670 274.7186 -477.306061 947229.2 -1 [28,] 3676 274.7187 -239.090311 947468.3 -1 [29,] 3738 274.7204 -616.641741 947638.7 -1 [30,] 5268 274.7623 -456.232876 962997.2 -1 [31,] 5274 274.7625 -720.224173 962740.0 -1 [32,] 5336 274.7642 -317.072597 963122.0 -1 [33,] 5400 274.7659 -578.530950 962450.1 -1 [34,] 5462 274.7676 -146.373725 962100.3 -1 [35,] 5595 274.7712 -320.536511 960183.8 1 [36,] 5596 274.7713 -331.380471 960074.7 -1 [37,] 5597 274.7713 -439.780459 960507.5 1 [38,] 6259 274.7894 -490.535246 961959.0 1 [39,] 6260 274.7895 -301.052243 961485.4 -1 [40,] 6261 274.7895 -173.415771 961670.0 1 [41,] 6262 274.7895 -293.537935 961528.8 -1 [42,] 6263 274.7895 -472.943538 962009.2 1 [43,] 6776 274.8036 -449.049995 970164.6 -1 [44,] 6782 274.8037 -224.339476 970398.0 -1 [45,] 6844 274.8054 -615.779461 969993.4 -1 [46,] 8320 274.8459 -458.339314 993857.1 -1 [47,] 8388 274.8477 -356.460404 996139.5 -1 [48,] 8452 274.8495 -7.875367 998345.2 -1 [49,] 9932 274.8899 -466.011539 997793.2 -1 [50,] 9938 274.8901 -221.458440 998007.6 -1 [51,] 10002 274.8918 -702.169639 997012.6 -1 [52,] 11242 274.9258 -412.894810 994413.2 -1 [53,] 11248 274.9259 -718.540284 994152.7 -1 [54,] 11310 274.9276 -312.289025 995031.8 -1 [55,] 12324 274.9554 -470.882149 1009117.0 -1 [56,] 12330 274.9555 -229.141359 1009460.6 -1 [57,] 12394 274.9573 -692.237556 1010005.4 -1 [58,] 13818 274.9962 -484.348455 1013718.4 -1 [59,] 13886 274.9981 -483.190880 1014762.8 -1 [60,] 13888 274.9982 -236.158264 1015015.6 -1 [61,] 15170 275.0332 -453.494322 1010812.5 -1 [62,] 15176 275.0334 -723.645260 1010270.8 -1 [63,] 15238 275.0351 -334.859565 1007795.6 -1 [64,] 16094 275.0585 -438.800940 1021060.5 -1 [65,] 16100 275.0586 -301.968795 1021415.9 -1 [66,] 16164 275.0604 -652.640867 1023079.3 -1 [67,] 17142 275.0871 -322.659703 1049939.4 -1 [68,] 17456 275.0957 -147.770065 1039307.0 -1 [69,] 17457 275.0957 -398.173149 1039437.0 1 [70,] 17458 275.0958 -632.568344 1038740.4 -1 [71,] 17520 275.0975 -473.971424 1037262.4 -1 [72,] 17584 275.0992 -534.873441 1035622.0 -1 [73,] 17646 275.1009 -316.728252 1035125.8 -1 [74,] 17648 275.1009 -22.489019 1035426.2 -1 [75,] 17704 275.1025 27.288269 1035672.7 -1 [76,] 17705 275.1025 949.038693 1035649.4 1 [77,] 17706 275.1025 2952.041864 1039140.2 -1 [78,] 17707 275.1025 6268.701094 1035683.7 1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 540 274.6330 2.915190e+02 [2,] 4943 274.7534 9.783891e+05 [3,] 4996 274.7549 2.932180e+02 [4,] 9161 274.8688 2.933380e+02 [5,] 10737 274.9119 9.830965e+09 [6,] 11355 274.9288 2.994910e+02 [7,] 16015 275.0563 2.962340e+02 [8,] 17706 275.1025 3.930170e+02 [9,] 17707 275.1025 3.758480e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 89.012 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -38.537 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -37.869 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 19.912 PER MEG" [1] "Screened 2 O2 and CO2 values when pdsp not controlling" [1] 378.7255 408.7686 393.4153 404.5340 404.9508 [1] -553.2191 -698.5062 -583.1895 -782.9400 -714.6838 [1] "Nominal linear calibrations:" [1] "co2scl = 1.051 co2off = -7.76 o2scla = -0.054 o2offa = -134.2" [1] "(dV/V)/(dXO2/XO2) = -3.859" [1] "(dV/V)/d(O2/N2) = -3.051" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.41 minutes" [1] "Shortest Cal: 0.16 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 44" [1] "at: 57" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-1HZ_DC8_20171001_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 647334 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM3/MMS/MMS-20Hz_DC8_20171001_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 18717504 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00441" [1] "HS CO2 vs. PACAB: m = -0.00367, r^2 = 0.6" [1] "LS CO2 vs. PACAB: m = -0.00515, r^2 = 0.65" [1] "HS+LS LIH2O vs. PACAB: m = -1.87e-05" [1] "HS LIH2O vs. PACAB: m = -2.43e-05, r^2 = 0.19" [1] "LS LIH2O vs. PACAB: m = -1.3e-05, r^2 = 0.05" [1] "HS+LS CO2 vs. LIH2O: m = 20.6" [1] "HS CO2 vs. LIH2O: m = 49.6, r^2 = 0.31" [1] "LS CO2 vs. LIH2O: m = -8.28, r^2 = 0.01" [1] "APCO2 vs. PACAB: m = 0.00879, r^2 = 0.07" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0273" [1] "HS O2 vs. PACAB: m = 0.0518, r^2 = 0.27" [1] "LS O2 vs. PACAB: m = 0.00288, r^2 = 0" [1] "HS+LS O2 vs. LIH2O: m = -617" [1] "HS O2 vs. LIH2O: m = -890, r^2 = 0.33" [1] "LS O2 vs. LIH2O: m = -345, r^2 = 0.06" [1] "HS+LS O2 vs. PAO2: m = -9.8" [1] "HS O2 vs. PAO2: m = -12.4, r^2 = 0.93" [1] "LS O2 vs. PAO2: m = -7.2, r^2 = 0.6" [1] "HS+LS O2 vs. TPBOX: m = 2.87" [1] "HS O2 vs. TPBOX: m = 3.65, r^2 = 0.82" [1] "LS O2 vs. TPBOX: m = 2.08, r^2 = 0.44" [1] "APO vs. PACAB: m = -0.148, r^2 = 0.07" [1] "APO vs. PAO2: m = -19.3, r^2 = 0.42" [1] "APO vs. TPBOX: m = 6.56, r^2 = 0.44" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.357, r^2 = 0.24" [1] "LS CO2 vs. LiCor Cell P: m = -0.439, r^2 = 0.32" [1] "HS CO2 vs. CO2 Vol P: m = 0.39, r^2 = 0.21" [1] "LS CO2 vs. CO2 Vol P: m = 0.394, r^2 = 0.2" [1] "HS CO2 vs. SLOPE: m = -0.133, r^2 = 0" [1] "LS CO2 vs. SLOPE: m = 0.315, r^2 = 0.02" [1] "HS O2 vs. O2 Vol P: m = -11.8, r^2 = 0.88" [1] "LS O2 vs. O2 Vol P: m = -6.28, r^2 = 0.48" [1] "HS O2 vs. O2 Cell T: m = 5.99, r^2 = 0.73" [1] "LS O2 vs. O2 Cell T: m = 3.5, r^2 = 0.49" [1] "HS O2 vs. CO2 Vol P: m = -10.1, r^2 = 0.43" [1] "LS O2 vs. CO2 Vol P: m = -7.07, r^2 = 0.36" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -2.12, r^2 = 0.01" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 4.97, r^2 = 0.08" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -10.1, r^2 = 0.43" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -7.07, r^2 = 0.36" [1] "HS O2 vs. LIH2O: m = -586, r^2 = 0.15" [1] "LS O2 vs. LIH2O: m = -57.8, r^2 = 0" [1] "HS O2 vs. SLOPE: m = -0.167, r^2 = 0.02" [1] "LS O2 vs. SLOPE: m = -0.575, r^2 = 0.13" [1] "HS CO2 vs. Time: m = 13.288, r^2 = 0.85" [1] "LS CO2 vs. Time: m = 13.149, r^2 = 0.85" [1] "HS CO2 vs. Cylinder T: m = 1, r^2 = 0.14" [1] "LS CO2 vs. Cylinder T: m = 1.428, r^2 = 0.286" [1] "HS CO2 vs. Regulator T: m = -0.336, r^2 = 0.5" [1] "LS CO2 vs. Regulator T: m = -0.372, r^2 = 0.526" [1] "HS CO2 vs. Ref. Volumes T: m = -0.4, r^2 = 0.43" [1] "LS CO2 vs. Ref. Volumes T: m = -0.469, r^2 = 0.507" [1] "HS CO2 vs. Manifold T: m = -0.18, r^2 = 0.39" [1] "LS CO2 vs. Manifold T: m = -0.176, r^2 = 0.391" [1] "HS CO2 vs. Pump Box T: m = -0.189, r^2 = 0.7" [1] "LS CO2 vs. Pump Box T: m = -0.2, r^2 = 0.754" [1] "HS O2 vs. Cylinder T: m = -24.825, r^2 = 0.27" [1] "LS O2 vs. Cylinder T: m = -12.288, r^2 = 0.118" [1] "HS O2 vs. Regulator T: m = 4.565, r^2 = 0.28" [1] "LS O2 vs. Regulator T: m = 1.131, r^2 = 0.027" [1] "HS O2 vs. Ref. Volumes T: m = 6.748, r^2 = 0.37" [1] "LS O2 vs. Ref. Volumes T: m = 2.404, r^2 = 0.074" [1] "HS O2 vs. Manifold T: m = 4.159, r^2 = 0.64" [1] "LS O2 vs. Manifold T: m = 2.419, r^2 = 0.414" [1] "HS O2 vs. Pump Box T: m = 3.588, r^2 = 0.78" [1] "LS O2 vs. Pump Box T: m = 1.792, r^2 = 0.337" [1] "HS CO2 vs. WT P: m = -0.004, r^2 = 0.36" [1] "LS CO2 vs. WT P: m = -0.005, r^2 = 0.521" [1] "HS CO2 vs. SP P: m = -0.00408, r^2 = 0.69" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.072, r^2 = 0.44" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.076, r^2 = 0.44" [1] "LS CO2 vs. SP P: m = -0.00496, r^2 = 0.67" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.141, r^2 = 0.59" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.137, r^2 = 0.59" [1] "HS CO2 vs. WT FL: m = -0.163, r^2 = 0.72" [1] "LS CO2 vs. WT FL: m = -0.175, r^2 = 0.746" [1] "HS CO2 vs. SP FL: m = 0.015, r^2 = 0.01" [1] "LS CO2 vs. SP FL: m = 0.034, r^2 = 0.032" [1] "HS O2 vs. SLPDIFF: m = 0.783, r^2 = 0.24" [1] "LS O2 vs. SLPDIFF: m = 0.231, r^2 = 0.061" [1] "HS O2 vs. WT P: m = 0.049, r^2 = 0.19" [1] "LS O2 vs. WT P: m = 0.007, r^2 = 0.007" [1] "HS O2 vs. SP P: m = 0.051, r^2 = 0.21" [1] "LS O2 vs. SP P: m = 0.007, r^2 = 0.007" [1] "HS O2 vs. WT FL: m = 2.924, r^2 = 0.71" [1] "LS O2 vs. WT FL: m = 1.277, r^2 = 0.222" [1] "HS O2 vs. SP FL: m = 0.241, r^2 = 0.01" [1] "LS O2 vs. SP FL: m = 0.69, r^2 = 0.072" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 54.56, 69.55" [1] "Empirical LP O2 lag flow(s): 109.5, 97.9" [1] "Empirical LP CO2 lag time(s): 40.56, 45.96" [1] "Empirical LP CO2 lag flow(s): 109.5, 97.9" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.4" [1] "Median all HS CO2 SD = 0.4" [1] "Median all LS CO2 SD = 0.42" [1] "Median all LT CO2 SD = 0.39" [1] "Median all WT CO2 SD = 0.44" [1] "Median all HS or LS CO2 SD = 0.4" [1] "Median all cal O2 SD = 1.45" [1] "Median all HS O2 SD = 1.4" [1] "Median all LS O2 SD = 1.29" [1] "Median all LT O2 SD = 1.21" [1] "Median all WT O2 SD = 1.32" [1] "Median all HS or LS O2 SD = 1.35" [1] "Median all cal CO2 Slope = 0.02" [1] "Median all HS CO2 Slope = 0.03" [1] "Median all LS CO2 Slope = 0.08" [1] "Median all LT CO2 Slope = -0.06" [1] "Median all WT CO2 Slope = -0.02" [1] "Median all HS or LS CO2 Slope = 0.05" [1] "Median all cal O2 Slope = 0.02" [1] "Median all HS O2 Slope = 0.94" [1] "Median all LS O2 Slope = -0.39" [1] "Median all LT O2 Slope = 0.02" [1] "Median all WT O2 Slope = -0.34" [1] "Median all HS or LS O2 Slope = 0.39" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 6.29 per meg" [1] "Initial O2 Calibration Offset = -11.12 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.65 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -12.26 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -10.2 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 53450.58 95259.54" [1] "Time lag adjustments = 17 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 61 at 101 sccm" [1] "Median O2 delay + tlagff = 61.8 at 101 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 60.3 at 101 sccm" [1] "Median O2 delay from 3-way + tlagff = 61.1 at 101 sccm" [1] "after calc and ff lag: 53387.72 95203.32" [1] "2025-05-13 16:12:51 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] -8.94448415 -2.86096348 -3.61151612 -3.61151612 -3.61151612 [6] -7.75377437 -10.03002327 -10.03002327 -10.03002327 -9.61909745 [11] -6.63663604 -6.63663604 -6.63663604 -6.63663604 -8.45854606 [16] -7.40852425 -4.99029528 -2.06333945 -3.37322138 -2.47918989 [21] -1.99682107 -1.99682107 1.76176798 1.80159486 0.84392075 [26] -2.06561226 -3.71932781 -5.59070040 -4.63845305 -3.96378877 [31] -4.21114268 -8.12966814 -9.82455180 -9.82455180 -9.92554220 [36] -7.34908496 -7.34908496 -7.25481482 -6.98374635 -6.09137958 [41] -6.09137958 -6.09137958 -4.41342933 -8.67537908 -8.67537908 [46] -8.67537908 -8.18317713 -5.83319578 -5.22507255 -5.22507255 [51] -5.29684486 -6.25309345 -12.02850886 -12.11378458 -12.11378458 [56] -11.55319511 -8.70218028 -8.09414309 -8.09414309 -8.09414309 [61] -3.23940365 -6.73169580 -6.73169580 -6.73169580 -8.33382213 [66] -6.24962773 -6.24962773 -6.24962773 -3.63894261 -2.70417445 [71] -2.70627854 -2.70444331 -1.45325083 4.58978229 4.58978229 [76] 4.58978229 4.58978229 3.13955520 3.23817219 3.23817219 [81] 3.23817219 3.04025220 3.23752802 3.25118283 3.25118283 [86] -1.79768173 -2.77652905 -2.77652905 -2.77652905 -2.24249408 [91] 1.67763983 2.65717535 3.31299173 3.84683536 1.45156132 [96] 1.45253733 1.45385407 1.45552688 11.42603417 11.42603417 [101] 11.42603417 11.42603417 4.39776790 4.39776790 4.39776790 [106] 4.39776790 1.97744079 -0.58042143 -0.95865888 -1.46407722 [111] -1.83073886 4.83354693 4.83354693 4.83354693 4.83354693 [116] 6.40688018 6.40688018 6.40688018 6.40688018 3.77486452 [121] 2.20791523 1.03142019 1.03142019 -4.37418467 -6.99507986 [126] -6.99507986 -6.99507986 -6.86900755 -3.62633407 -3.62633407 [131] -3.62633407 -3.03686679 1.81315378 3.07830478 4.21326010 [136] 4.21326010 1.39995031 1.39995031 1.44178376 3.90131215 [141] -0.08970993 -0.47622728 -0.47622728 -0.47622728 -3.49424146 [146] -3.94771094 -4.45180085 -4.45180085 -3.93317298 -1.88030002 [151] -1.03113056 0.83102398 0.86000005 0.48500841 0.48500841 [156] 0.48500841 1.00879185 -0.34655025 -0.34655025 -0.34655025 [161] -0.41719114 -0.83349684 -0.87764805 -0.87764805 -1.42100622 [166] -3.42765441 -5.06235284 -5.06235284 -5.06235284 -5.06235284 [171] -1.31702214 1.33098586 1.33098586 1.33098586 2.64736119 [176] 2.64736119 2.64736119 2.64736119 0.36560930 0.36560930 [181] 0.33943287 0.23171965 -2.22248330 -6.24377346 -6.24377346 [186] -6.24377346 -6.24377346 -0.60332138 -0.60332138 -0.60332138 [191] -0.60332138 3.65615798 3.02286083 2.61972185 2.61972185 [196] -2.70571274 -2.70571274 -2.70571274 -3.21883764 -0.67255295 [201] -1.00037444 -1.35928499 -1.35928499 0.87664835 4.54785015 [206] 4.75868336 4.97855054 6.20861119 -6.07597023 -5.90820954 [211] -5.90820954 -5.90820954 4.20996277 4.45827802 5.96006748 [216] 6.88663125 12.71104106 13.30935665 13.30935665 13.30935665 [221] 13.21839692 11.27861778 9.07581604 7.20509182 6.28052009 [226] -3.33764417 -3.33764417 -3.33764417 -3.33764417 1.90903019 [231] 3.03298694 3.85652345 4.57164040 1.42812343 1.42812343 [236] 1.42812343 1.05450746 0.60332239 -2.68467064 -3.47474176 [241] -3.47474176 -5.08943199 -13.72425384 -11.61773724 -8.44634264 [246] -8.44634264 10.21514054 10.21514054 10.21717389 11.44515291 [251] 6.40915819 6.40915819 6.40915819 6.40915819 3.25182778 [256] 3.25182778 3.25941136 3.26881642 1.39310933 0.07865519 [261] 0.08895800 0.08895800 0.08895800 2.02179156 2.02179156 [266] 2.02179156 2.02179156 5.44067431 5.44067431 4.63341031 [271] 1.01504897 -2.54895429 -2.54895429 -2.54895429 -2.54895429 [276] -11.22685720 -10.46617307 -5.04392976 -5.04392976 -6.07945333 [281] -10.51326411 -10.51326411 -10.10911809 -9.51196870 10.61351539 [286] 10.61351539 10.61351539 10.61351539 0.04772775 0.04772775 [291] 0.22273038 0.54616190 4.66677636 5.26790603 5.26790603 [296] 5.26790603 5.68336663 8.16364420 8.16364420 8.16364420 [301] 8.16364420 6.62119490 6.62119490 6.62119490 5.91857020 [306] 5.01990394 3.85106995 3.85106995 3.85106995 1.21618692 [311] 1.21618692 1.21618692 1.25637468 7.80211348 9.73565385 [316] 9.73565385 9.73565385 9.17463617 4.19672992 4.19672992 [321] 4.19672992 4.19672992 2.26870083 2.26870083 2.26870083 [326] 2.37658368 3.54863968 3.87992724 4.21879790 4.69819348 [331] 7.72624866 7.81331209 7.81331209 7.81331209 5.37690092 [336] 1.99814828 1.76657155 1.45240374 1.21967573 -0.69768514 [341] -0.77269554 -0.78589190 -0.78589190 0.73205703 0.73205703 [346] 0.73205703 0.73205703 -3.36507873 -2.38690248 -0.90544575 [351] -0.90544575 3.53649543 5.07736731 5.07736731 4.98278663 [356] 1.88285572 -6.27138836 -6.27138836 -6.27138836 -6.27138836 [361] -3.34459951 -4.36894516 -6.72011953 -7.86408876 9.42181873 [366] 9.42181873 9.42181873 9.42181873 6.13155397 1.21895384 [371] 1.21895384 1.21895384 1.21895384 -0.31270896 -0.31270896 [376] -0.09857740 0.22526917 -0.83532972 -0.35666625 0.23666823 [381] 0.88056387 1.76216748 1.79614088 1.79614088 1.79614088 [386] 7.11266432 7.22301058 7.22301058 7.12720697 6.03008818 [391] 5.32040158 5.19614170 5.19614170 5.19614170 2.41873484 [396] 2.41873484 2.41873484 3.96755588 7.06414374 9.25088306 [401] 9.26795282 9.26795282 -9.51504189 -9.51504189 -9.51504189 [406] -9.51504189 0.31001475 5.62966701 5.62966701 5.62966701 [411] 5.75121073 7.89918025 7.64866381 7.32705708 7.22111767 [416] -0.72613677 -0.72613677 -0.72613677 -0.72613677 -1.02338884 [421] -1.02338884 -1.02338884 -4.74420875 -0.39594697 -0.02880398 [426] -0.02880398 -0.02880398 -6.34844656 -13.52781831 -10.62026403 [431] -8.88567574 -8.88567574 -10.56224811 -10.56224811 -10.56224811 [436] -10.56224811 1.82733842 1.82733842 1.82733842 2.07992250 [441] 4.46975431 4.90052324 5.34946610 5.82775050 7.84328266 [446] 9.95803094 9.95803094 9.95803094 9.95803094 -0.34802326 [451] -0.34802326 -0.34802326 -0.44417745 -0.61233420 -1.47150256 [456] -1.54420784 -1.54420784 -0.61816334 -0.61816334 -0.61816334 [461] -0.61816334 6.01337404 9.35206470 9.35206470 9.35206470 [466] 9.35206470 6.81710108 6.46329857 6.20928513 5.48382043 [471] 1.27111263 0.73658216 0.71954621 0.70321680 -10.07605469 [476] -10.07605469 -10.07605469 -10.07605469 -2.55599009 -2.00458641 [481] -1.37523401 -1.01907493 [1] 157.2154 159.4938 161.5150 163.7735 165.2793 167.3131 169.1992 171.1466 [9] 172.3727 173.9424 174.7227 175.4325 175.7294 175.9644 176.3419 176.6283 [17] 177.2879 178.0861 179.2379 180.1952 181.3848 182.7365 184.4426 186.2400 [25] 188.2210 190.3513 192.6307 195.3239 198.0328 200.7650 203.8894 207.4974 [33] 211.0019 214.2684 217.3935 220.1253 222.7544 225.1767 227.7762 229.9805 [41] 232.0599 234.3811 236.5934 239.0547 241.2623 243.4533 245.3949 247.5271 [49] 249.2932 251.2089 253.0704 254.7677 256.9612 259.0150 260.9042 262.9817 [57] 264.9637 266.9686 268.8375 270.7439 272.6641 274.5662 276.6433 278.6832 [65] 280.8815 283.2341 285.7406 287.9515 290.6806 292.8747 294.8580 296.9943 [73] 298.9608 300.8833 302.7994 304.6172 306.3985 308.2457 310.1987 311.9515 [81] 313.7318 315.3560 316.9306 318.5147 319.3789 320.2464 320.8866 321.3555 [89] 321.9229 322.4567 323.1106 323.9269 324.4734 324.9976 325.3107 325.6929 [97] 326.2085 326.8635 327.5997 328.0979 328.5710 329.1104 329.4053 329.5384 [105] 329.6482 329.9518 330.6809 331.3436 332.4413 333.5539 334.2872 335.2552 [113] 335.6958 336.1669 336.7613 337.5380 338.3474 339.4658 340.3218 341.2438 [121] 342.0083 342.6233 343.1143 343.5143 344.1008 344.6350 345.4285 346.0320 [129] 346.7113 347.4356 347.8615 348.4832 348.9498 349.5498 350.4374 351.4172 [137] 352.7566 354.2415 355.8272 357.4928 359.1593 360.5198 362.1834 363.6883 [145] 365.5667 366.8522 368.2020 369.5602 370.9572 372.3514 373.7020 375.0653 [153] 376.2915 377.7903 379.3761 380.6075 382.0231 383.5474 385.3231 387.1243 [161] 388.7974 390.6247 392.5038 394.1159 396.1535 397.9667 399.6684 401.3830 [169] 402.9494 404.3545 405.8499 406.9611 407.9407 408.6011 409.2251 409.5669 [177] 410.0626 410.7232 411.2901 411.8922 412.4431 413.0823 413.5400 413.9662 [185] 414.4644 414.8434 415.3378 415.8440 416.4942 417.1697 418.1786 419.1596 [193] 420.3529 421.4920 422.5894 423.8958 425.0381 426.1127 427.1260 428.0518 [201] 429.1482 430.0990 430.9994 432.1076 433.0625 433.8987 434.7216 435.4937 [209] 436.4717 437.4653 438.5382 439.4884 440.7938 441.8052 442.7558 443.7282 [217] 444.6653 445.5261 446.3201 447.1040 447.8599 448.8832 449.5820 450.5161 [225] 451.3589 452.1840 452.9976 453.8795 454.7052 455.6181 456.4936 457.3354 [233] 458.4044 459.4396 460.4120 461.4958 462.5475 463.6493 464.8043 465.9769 [241] 466.9970 468.1772 469.3048 470.5382 471.7783 472.8754 474.2138 475.1868 [249] 476.1864 477.1729 478.1382 479.0650 480.0529 480.8183 481.7278 482.4683 [257] 483.2657 483.9797 484.6720 485.3553 486.0434 486.6190 487.2270 487.6438 [265] 488.0994 488.5515 488.9908 489.5203 490.1156 490.8531 491.6342 492.6863 [273] 493.6006 494.6284 495.6145 496.8309 497.9017 498.9584 500.0616 501.0714 [281] 502.1110 503.0350 503.8862 504.6039 505.5121 506.2450 506.9552 507.6244 [289] 508.4201 509.2548 510.0870 511.0129 511.9812 512.8733 513.5761 514.3813 [297] 514.9130 515.4640 515.7685 515.9331 516.0282 516.2270 516.5089 517.0151 [305] 517.5798 518.2320 518.9891 519.7091 520.4768 521.2309 521.9610 522.7992 [313] 523.5728 524.3664 525.0485 525.6950 526.3136 526.8633 527.3535 527.9049 [321] 528.3105 528.7308 529.0698 529.3800 529.6203 529.7839 530.0931 530.4037 [329] 530.7213 531.2502 531.9316 532.6556 533.4043 534.1567 534.9773 535.6623 [337] 536.2922 536.9075 537.5429 538.1364 538.7522 539.3573 539.9702 540.6117 [345] 541.2505 541.8350 542.5567 543.2348 544.0805 544.8325 545.5082 546.3996 [353] 547.2023 548.0605 548.9441 549.7133 550.6534 551.4908 552.3662 553.2352 [361] 554.0260 554.9621 555.7740 556.6107 557.4547 558.1900 558.8074 559.2836 [369] 559.6001 559.7758 559.7900 559.7132 559.7222 559.8497 560.1302 560.4593 [377] 560.7592 561.2783 561.7216 562.1711 562.6585 563.1334 563.6872 564.2745 [385] 564.8978 565.4863 566.0503 566.6858 567.2487 567.8930 568.4937 569.1847 [393] 569.8722 570.4995 571.2697 571.9675 572.6202 573.2166 573.7645 574.3005 [401] 574.7036 574.9668 575.2644 575.4378 575.6552 575.8749 576.1378 576.5472 [409] 576.9528 577.4195 577.9521 578.4511 578.9140 579.5081 579.8670 580.4523 [417] 580.8466 581.2805 581.7892 582.4119 583.0456 583.7444 584.5429 585.3388 [425] 586.4511 587.3579 588.4637 589.3364 590.3200 591.1459 591.7446 592.2593 [433] 592.6950 593.1190 593.5065 593.9882 594.3753 594.8110 595.2516 595.6416 [441] 595.9337 596.1766 596.4299 596.6996 596.9146 597.2272 597.5556 597.9866 [449] 598.4794 599.1272 599.6333 600.2645 600.9212 601.5093 602.1885 602.8487 [457] 603.4693 604.0703 604.6341 605.0686 605.4446 605.7365 605.9482 606.1291 [465] 606.1575 606.3370 606.3615 606.5552 606.6943 607.0915 607.3920 607.8972 [473] 608.4594 609.0431 609.6551 610.3193 610.8223 611.2563 611.6864 612.1210 [481] 612.6169 612.8963 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 43 O2 values from manual exclude period 274.747673 to 274.748834" [1] "Not reporting 43 APO values from manual exclude period 274.747673 to 274.748834" [1] "Not reporting 53 O2 values from manual exclude period 274.797883 to 274.799334" [1] "Not reporting 53 APO values from manual exclude period 274.797883 to 274.799334" [1] "Not reporting 32 O2 values from manual exclude period 274.795561 to 274.796432" [1] "Not reporting 32 APO values from manual exclude period 274.795561 to 274.796432" [1] "Not reporting 42 O2 values from manual exclude period 274.684982 to 274.686143" [1] "Not reporting 42 APO values from manual exclude period 274.684982 to 274.686143" [1] "Not reporting 32 O2 values from manual exclude period 274.686433 to 274.687304" [1] "Not reporting 32 APO values from manual exclude period 274.686433 to 274.687304" [1] "Not reporting 102 smoothed O2 values from manual exclude period 274.746928584939 to 274.748104664011" [1] "Not reporting 102 smoothed APO values from manual exclude period 274.746928584939 to 274.748104664011" [1] "Not reporting 126 smoothed O2 values from manual exclude period 274.797169639686 to 274.79863317472" [1] "Not reporting 126 smoothed APO values from manual exclude period 274.797169639686 to 274.79863317472" [1] "Not reporting 76 smoothed O2 values from manual exclude period 274.794846262349 to 274.795727783253" [1] "Not reporting 76 smoothed APO values from manual exclude period 274.794846262349 to 274.795727783253" [1] "Not reporting 101 smoothed O2 values from manual exclude period 274.684304832372 to 274.685472941001" [1] "Not reporting 101 smoothed APO values from manual exclude period 274.684304832372 to 274.685472941001" [1] "Not reporting 76 smoothed O2 values from manual exclude period 274.685756023626 to 274.686633297314" [1] "Not reporting 76 smoothed APO values from manual exclude period 274.685756023626 to 274.686633297314" [1] "Not reporting 102 smoothed O2 values from manual exclude period 274.746928584939 to 274.748104664011" [1] "Not reporting 102 smoothed APO values from manual exclude period 274.746928584939 to 274.748104664011" [1] "Not reporting 126 smoothed O2 values from manual exclude period 274.797169639686 to 274.79863317472" [1] "Not reporting 126 smoothed APO values from manual exclude period 274.797169639686 to 274.79863317472" [1] "Not reporting 76 smoothed O2 values from manual exclude period 274.794846262349 to 274.795727783253" [1] "Not reporting 76 smoothed APO values from manual exclude period 274.794846262349 to 274.795727783253" [1] "Not reporting 101 smoothed O2 values from manual exclude period 274.684304832372 to 274.685472941001" [1] "Not reporting 101 smoothed APO values from manual exclude period 274.684304832372 to 274.685472941001" [1] "Not reporting 76 smoothed O2 values from manual exclude period 274.685756023626 to 274.686633297314" [1] "Not reporting 76 smoothed APO values from manual exclude period 274.685756023626 to 274.686633297314" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171001_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 143852 items [1] 2 3598 35963 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33767 [1] "Average Date / Time for slice RF02 = 2017-10-01 20:56:02.16483521461487" [1] "sum(lsel) = 2730" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -15.645 802.956 [1] -15.645 802.956 [1] 197.044 1015.645 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 724.749" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF02 APO_AO2 range = -349.35,-316.45" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171001_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 143852 items [1] 2 3598 35963 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 33778 [1] "Average Date / Time for slice RF02 = 2017-10-01 20:56:07.96777725219727" [1] "sum(lsel) = 2731" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -15.645 802.956 [1] -15.645 802.956 [1] 197.044 1015.645 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 724.749" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF02 O2_AO2 range = -632.72,-591.48" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1710/AO2_DC8_20171001_R4.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 143852 items [1] 2 3598 35963 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 271 271 271 271 271 271 [1] 52570 52580 52590 52600 52610 52620 [1] "2017-09-28 14:36:10 UTC" "2017-09-28 14:36:20 UTC" [3] "2017-09-28 14:36:30 UTC" "2017-09-28 14:36:40 UTC" [5] "2017-09-28 14:36:50 UTC" "2017-09-28 14:37:00 UTC" [1] NA NA NA NA NA NA [1] 34275 [1] "Average Date / Time for slice RF02 = 2017-10-01 20:52:29.5154342651367" [1] "sum(lsel) = 2786" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -15.645 802.956 [1] -15.645 802.956 [1] 197.044 1015.645 [1] 1.714286e-02 9.999990e+05 [1] "highestmid = 724.749" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM3 RF02 CO2_AO2 range = 401.73,404.95" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"