[1] "2025-05-13 15:46:16 MDT" options [1,] "file" "170218a" [2,] "flight" "RF09" [3,] "project" "ATOM2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "300" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "2" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "170218a" [1] "Reading in flight and plotting intervals" Read 21 records [1] "Reading in /scr/raf/stephens/AO2DAT/170218a.mr" Read 13541 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.37 seconds" [1] "New JOGEST = 2.37 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/170218a.hr" Read 54167 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 03:46:16 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 385.36 O2 = -508.1" [1] "position 2 cylinder OK30761 description: LS CO2 = 419.93 O2 = -735.1" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -584.6" [1] "position 4 cylinder OK30770 description: WT CO2 = 398.32 O2 = -789.1" [1] "position 5 cylinder OK30766 description: LP CO2 = 398.98 O2 = -752" [1] 385.3577 419.9305 393.4141 398.3227 398.9819 [1] -508.1175 -735.1249 -584.6100 -789.0817 -751.9515 [1] "Nominal linear calibrations:" [1] "co2scl = 0.979 co2off = -5.99 o2scla = -0.048 o2offa = -46.6" [1] "(dV/V)/(dXO2/XO2) = -4.342" [1] "(dV/V)/d(O2/N2) = -3.432" [1] "Reading in very high resolution timeseries" Read 270820 records [1] 270820 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 03:46:17 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 03:46:18 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.432" [1] "o2scaleavenew_drelVdrelP = -4.342" [1] "median(o2scalenew) = -3.432" [1] "Empirical dV/V vs dP/P relationship =-3.275, r^2 =0.425, damping =0.754" [1] "Tue May 13 03:46:18 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 11893 12327 12812 $icochar [1] "0" "0" "16:52:46" "16:16:27" "49.689662" "49.689662" [7] "09:17:31" "49.392158" "49.420379" "49.444379" "49.463045" "49.476378" [13] "49.494600" "49.508822" "49.528821" "49.547487" "49.577709" "49.628374" [19] "49.649040" "49.671040" "16:20:00" $ecochar [1] "367" "09:17:31" "367" "16:33:35" "49.690948" "49.690948" [7] "16:52:46" "49.420379" "49.448601" "49.463045" "49.480156" "49.494600" [13] "49.508822" "49.528821" "49.550598" "49.577709" "49.628374" "49.653040" [19] "49.671040" "49.703039" "16:35:00" $flag [1] "all" "LP" "LP" "LP" [5] "donotreporto2" "donotreportco2" "flight" "a" [9] "b" "c" "d" "e" [13] "f" "g" "h" "i" [17] "j" "k" "l" "m" [21] "MMS" $ico2 [1] 0.00000 0.00000 49.70331 49.67809 49.68966 49.68966 49.38716 49.39216 [9] 49.42038 49.44438 49.46305 49.47638 49.49460 49.50882 49.52882 49.54749 [17] 49.57771 49.62837 49.64904 49.67104 49.68056 $eco2 [1] 367.00000 49.38716 367.00000 49.68999 49.69095 49.69095 49.70331 [8] 49.42038 49.44860 49.46305 49.48016 49.49460 49.50882 49.52882 [15] 49.55060 49.57771 49.62837 49.65304 49.67104 49.70304 49.69097 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 11892 11892 49.67806 6.927944 -0.00084975 0.01022155 0.01022155 11892 11893 11893 49.67809 6.936523 -0.00080950 0.01025320 0.01025320 11893 11894 11894 49.67811 6.928128 -0.00083840 0.01027560 0.01027560 11894 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 11892 10.5 1.0 46.0 5730.5 1 6.932253 6.932039 11893 10.5 3.5 46.5 2875.5 -1 6.940827 6.940624 11894 10.5 6.0 47.0 20.5 1 6.932452 6.932241 vuvsigpdprcorr 11892 6.929476 11893 6.938050 11894 6.929665 [1] 0.6780594 0.6780873 0.6781148 [,1] [,2] [,3] [1,] 0.678072 1 1 [2,] 0.678081 -1 1 [3,] 0.678087 -1 1 [4,] 0.678093 -1 6 [5,] 0.678099 -1 6 [6,] 0.678109 1 6 [7,] 0.678115 1 6 [8,] 0.678120 1 6 [9,] 0.678126 1 6 [10,] 0.678136 -1 6 [11,] 0.678142 -1 6 [12,] 0.678148 -1 6 [13,] 0.678153 -1 6 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 12326 12326 49.68997 6.925531 -0.00097565 0.01291670 0.01291670 12326 12327 12327 49.68999 6.936892 -0.00074570 0.01293525 0.01293525 12327 12328 12328 49.69002 6.925297 -0.00080410 0.01291505 0.01291505 12328 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 12326 10.5 6.00 47.00 8660.50 1 6.930934 6.930689 12327 10.5 2.25 47.75 2174.25 -1 6.942223 6.942035 12328 10.5 1.00 48.00 25.50 1 6.930674 6.930472 vuvsigpdprcorr 12326 6.927443 12327 6.938779 12328 6.927227 [1] 0.6899669 0.6899940 0.6900215 [,1] [,2] [,3] [1,] 0.689978 1 6 [2,] 0.689988 -1 6 [3,] 0.689994 -1 1 [4,] 0.690000 -1 1 [5,] 0.690005 -1 1 [6,] 0.690016 1 1 [7,] 0.690021 1 1 [8,] 0.690027 1 1 [9,] 0.690033 1 1 [10,] 0.690043 -1 1 [11,] 0.690049 -1 1 [12,] 0.690054 -1 1 [13,] 0.690060 -1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 12811 12811 49.70328 6.922564 -0.00084115 0.0140733 0.0140733 12811 12812 12812 49.70331 6.911740 -0.00086415 0.0140418 0.0140418 12812 12813 12813 49.70333 6.922336 -0.00108875 0.0140156 0.0140156 12813 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 12811 10.5 1.0 48.0 9685.5 -1 6.928382 6.928171 12812 10.5 3.5 48.5 4853.0 1 6.917541 6.917324 12813 10.5 6.0 49.0 20.5 -1 6.928242 6.927968 vuvsigpdprcorr 12811 6.924629 12812 6.913795 12813 6.924440 [1] 0.7032798 0.7033072 0.7033341 [,1] [,2] [,3] [1,] 0.703291 -1 1 [2,] 0.703301 1 1 [3,] 0.703307 1 1 [4,] 0.703313 1 6 [5,] 0.703319 1 6 [6,] 0.703328 -1 6 [7,] 0.703334 -1 6 [8,] 0.703340 -1 6 [9,] 0.703345 -1 6 [10,] 0.703356 1 6 [11,] 0.703362 1 6 [12,] 0.703368 1 6 [13,] 0.703373 1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 11893 12327 12812 $icochar [1] "0" "0" "16:52:46" "16:16:27" "49.689662" "49.689662" [7] "09:17:31" "49.392158" "49.420379" "49.444379" "49.463045" "49.476378" [13] "49.494600" "49.508822" "49.528821" "49.547487" "49.577709" "49.628374" [19] "49.649040" "49.671040" "16:20:00" $ecochar [1] "367" "09:17:31" "367" "16:33:35" "49.690948" "49.690948" [7] "16:52:46" "49.420379" "49.448601" "49.463045" "49.480156" "49.494600" [13] "49.508822" "49.528821" "49.550598" "49.577709" "49.628374" "49.653040" [19] "49.671040" "49.703039" "16:35:00" $flag [1] "all" "LP" "LP" "LP" [5] "donotreporto2" "donotreportco2" "flight" "a" [9] "b" "c" "d" "e" [13] "f" "g" "h" "i" [17] "j" "k" "l" "m" [21] "MMS" $ico2 [1] 0.00000 0.00000 49.70331 49.67809 49.68966 49.68966 49.38716 49.39216 [9] 49.42038 49.44438 49.46305 49.47638 49.49460 49.50882 49.52882 49.54749 [17] 49.57771 49.62837 49.64904 49.67104 49.68056 $eco2 [1] 367.00000 49.38716 367.00000 49.68999 49.69095 49.69095 49.70331 [8] 49.42038 49.44860 49.46305 49.48016 49.49460 49.50882 49.52882 [15] 49.55060 49.57771 49.62837 49.65304 49.67104 49.70304 49.69097 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 11892 11892 49.67806 6.927944 -0.00084975 0.01022155 0.01022155 11892 11893 11893 49.67809 6.936523 -0.00080950 0.01025320 0.01025320 11893 11894 11894 49.67811 6.928128 -0.00083840 0.01027560 0.01027560 11894 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 11892 10.5 1.0 46.0 5730.5 1 6.932253 6.932039 11893 10.5 3.5 46.5 2875.5 -1 6.940827 6.940624 11894 10.5 6.0 47.0 20.5 1 6.932452 6.932241 vuvsigpdprcorr 11892 6.929476 11893 6.938050 11894 6.929665 [1] 0.6780594 0.6780873 0.6781148 [,1] [,2] [,3] [1,] 0.678072 1 1 [2,] 0.678081 -1 1 [3,] 0.678087 -1 1 [4,] 0.678093 -1 6 [5,] 0.678099 -1 6 [6,] 0.678109 1 6 [7,] 0.678115 1 6 [8,] 0.678120 1 6 [9,] 0.678126 1 6 [10,] 0.678136 -1 6 [11,] 0.678142 -1 6 [12,] 0.678148 -1 6 [13,] 0.678153 -1 6 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 12326 12326 49.68997 6.925531 -0.00097565 0.01291670 0.01291670 12326 12327 12327 49.68999 6.936892 -0.00074570 0.01293525 0.01293525 12327 12328 12328 49.69002 6.925297 -0.00080410 0.01291505 0.01291505 12328 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 12326 10.5 6.00 47.00 8660.50 1 6.930934 6.930689 12327 10.5 2.25 47.75 2174.25 -1 6.942223 6.942035 12328 10.5 1.00 48.00 25.50 1 6.930674 6.930472 vuvsigpdprcorr 12326 6.927443 12327 6.938779 12328 6.927227 [1] 0.6899669 0.6899940 0.6900215 [,1] [,2] [,3] [1,] 0.689978 1 6 [2,] 0.689988 -1 6 [3,] 0.689994 -1 1 [4,] 0.690000 -1 1 [5,] 0.690005 -1 1 [6,] 0.690016 1 1 [7,] 0.690021 1 1 [8,] 0.690027 1 1 [9,] 0.690033 1 1 [10,] 0.690043 -1 1 [11,] 0.690049 -1 1 [12,] 0.690054 -1 1 [13,] 0.690060 -1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 12811 12811 49.70328 6.922564 -0.00084115 0.0140733 0.0140733 12811 12812 12812 49.70331 6.911740 -0.00086415 0.0140418 0.0140418 12812 12813 12813 49.70333 6.922336 -0.00108875 0.0140156 0.0140156 12813 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 12811 10.5 1.0 48.0 9685.5 -1 6.928382 6.928171 12812 10.5 3.5 48.5 4853.0 1 6.917541 6.917324 12813 10.5 6.0 49.0 20.5 -1 6.928242 6.927968 vuvsigpdprcorr 12811 6.924629 12812 6.913795 12813 6.924440 [1] 0.7032798 0.7033072 0.7033341 [,1] [,2] [,3] [1,] 0.703291 -1 1 [2,] 0.703301 1 1 [3,] 0.703307 1 1 [4,] 0.703313 1 6 [5,] 0.703319 1 6 [6,] 0.703328 -1 6 [7,] 0.703334 -1 6 [8,] 0.703340 -1 6 [9,] 0.703345 -1 6 [10,] 0.703356 1 6 [11,] 0.703362 1 6 [12,] 0.703368 1 6 [13,] 0.703373 1 6 [1] "JOGAVES DOES NOT MATCH" [1] "Plotting Jog Shapes" [1] "Tue May 13 03:46:55 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 03:46:55 PM MDT 2025 done recreating mr o2diffs" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -44964.042 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -15643.938 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -15631.123 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.147 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 32 [1] 97 [1] 121 [1] 121 [1] 155 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 83 49.35499 1881.5067 1065722.4 -1 [2,] 84 49.35501 1430.0348 1063713.5 1 [3,] 85 49.35504 966.7919 1064764.9 -1 [4,] 159 49.35706 848.6604 1064844.5 -1 [5,] 160 49.35709 1077.7332 1063925.9 1 [6,] 161 49.35711 1371.5010 1065445.9 -1 [7,] 163 49.35717 1685.5627 1065747.0 -1 [8,] 237 49.35920 1718.5225 1065931.6 -1 [9,] 238 49.35922 1473.4100 1064081.2 1 [10,] 239 49.35925 1235.6393 1065410.8 -1 [11,] 315 49.36131 1414.2997 1065690.4 -1 [12,] 465 49.36540 1724.2263 1065036.3 -1 [13,] 466 49.36542 1510.3393 1063158.2 1 [14,] 467 49.36545 1232.5100 1064429.1 -1 [15,] 469 49.36550 922.3832 1064088.0 -1 [16,] 541 49.36747 858.2605 1063726.1 -1 [17,] 542 49.36750 1127.3032 1062790.9 1 [18,] 543 49.36753 1440.8627 1064367.3 -1 [19,] 771 49.37376 1666.8762 1063861.3 -1 [20,] 772 49.37378 1319.6092 1062075.6 1 [21,] 773 49.37381 951.3164 1063095.1 -1 [22,] 847 49.37583 876.0287 1062724.5 -1 [23,] 848 49.37586 1244.4231 1061754.6 1 [24,] 849 49.37588 1617.8655 1063495.7 -1 [25,] 1229 49.38622 1694.7287 1056442.3 -1 [26,] 1230 49.38625 1321.5462 1054587.7 1 [27,] 1231 49.38627 942.8505 1055549.4 -1 [28,] 1381 49.39037 1212.6046 1050485.3 -1 [29,] 1382 49.39040 1693.1614 1049124.5 1 [30,] 1383 49.39043 2159.0068 1051400.0 -1 [31,] 1453 49.39235 2061.7460 1048995.4 -1 [32,] 1454 49.39238 1872.6947 1046684.1 1 [33,] 1455 49.39240 1846.0097 1048385.1 -1 [34,] 1456 49.39243 2014.8814 1046149.8 1 [35,] 2461 49.41997 1286.2499 1020360.5 -1 [36,] 2467 49.42014 852.8558 1019753.1 -1 [37,] 2541 49.42215 1000.5696 1018111.3 -1 [38,] 2542 49.42218 1329.7296 1017036.3 1 [39,] 2543 49.42221 1631.6794 1018714.7 -1 [40,] 3889 49.45904 1337.3491 1012824.2 -1 [41,] 3895 49.45920 1686.1551 1013166.7 -1 [42,] 3969 49.46122 1728.4990 1012936.6 -1 [43,] 3970 49.46125 1441.9930 1011147.2 1 [44,] 3971 49.46128 1102.8536 1012243.7 -1 [45,] 5121 49.49277 1370.1116 1005253.5 -1 [46,] 5127 49.49293 888.7101 1004725.1 -1 [47,] 5201 49.49495 930.2801 1004053.4 -1 [48,] 5202 49.49498 1300.6980 1003085.0 1 [49,] 5203 49.49501 1657.6289 1004765.9 -1 [50,] 5279 49.49708 1203.6010 1003430.1 -1 [51,] 6171 49.52152 1423.9928 1001958.7 -1 [52,] 6177 49.52169 899.1275 1001411.3 -1 [53,] 6251 49.52370 1016.8805 1001400.6 -1 [54,] 6252 49.52373 1342.6070 1000359.0 1 [55,] 6253 49.52376 1655.5499 1002038.9 -1 [56,] 7621 49.56117 1417.9620 1002150.6 -1 [57,] 7701 49.56336 1553.8470 1002477.3 -1 [58,] 7702 49.56339 1215.1713 1000917.3 1 [59,] 7703 49.56341 903.8340 1001834.1 -1 [60,] 8307 49.57994 1406.4647 993881.8 -1 [61,] 8313 49.58011 859.2733 993248.7 -1 [62,] 8387 49.58214 957.1806 992554.8 -1 [63,] 8388 49.58216 1303.9649 991575.0 1 [64,] 8389 49.58219 1622.5268 993212.4 -1 [65,] 8465 49.58427 1150.4217 992287.5 -1 [66,] 8541 49.58633 1738.6090 992716.9 -1 [67,] 9821 49.62138 1261.0188 998432.6 -1 [68,] 9827 49.62154 1662.7639 998814.2 -1 [69,] 9901 49.62356 1559.2862 998060.7 -1 [70,] 9902 49.62359 1211.8425 996497.1 1 [71,] 9903 49.62362 883.1715 997379.2 -1 [72,] 11379 49.66403 1312.6836 992749.5 -1 [73,] 11385 49.66420 855.3526 992369.8 -1 [74,] 11459 49.66622 983.2607 993739.6 -1 [75,] 11460 49.66625 1388.7942 992724.3 1 [76,] 11461 49.66628 1670.2282 994433.8 -1 [77,] 11895 49.67815 1217.9083 996548.8 -1 [78,] 11913 49.67863 1611.8888 996994.6 -1 [79,] 11914 49.67866 1918.6017 995369.3 1 [80,] 11915 49.67869 2287.1569 997684.7 -1 [81,] 11916 49.67871 2640.8038 995351.2 1 [82,] 11917 49.67874 2895.0059 998258.9 -1 [83,] 12794 49.70282 1651.8458 992648.6 1 [84,] 12795 49.70284 1596.5428 994479.3 -1 [85,] 12796 49.70287 1482.9954 993064.5 1 [86,] 12813 49.70334 1545.1130 994490.8 -1 [87,] 13259 49.71555 1696.5621 998205.1 -1 [88,] 13260 49.71558 1364.2929 996522.1 1 [89,] 13261 49.71561 923.7461 997486.9 -1 [90,] 13337 49.71769 1131.9628 999491.1 -1 [91,] 13411 49.71971 1187.5547 1000883.2 -1 [92,] 13412 49.71973 1458.3501 999680.2 1 [93,] 13413 49.71976 1737.1470 1001443.1 -1 [94,] 13480 49.72158 2890.4861 1000607.7 1 [95,] 13481 49.72161 1812.0174 1002462.4 -1 [96,] 13482 49.72164 -2106.3303 1000621.1 1 [97,] 13483 49.72166 1946.2319 1002527.3 -1 [98,] 13484 49.72169 26767.3128 1000685.8 1 [99,] 13485 49.72172 76017.1554 1090686.0 -1 [100,] 13486 49.72174 175428.8820 1001949.5 1 [101,] 13487 49.72177 219364.3780 1290821.9 -1 [102,] 13488 49.72180 369008.6181 1003496.3 1 [103,] 13489 49.72183 300648.9335 1440514.0 -1 [104,] 13490 49.72186 458092.3283 1003734.8 1 [105,] 13491 49.72189 312287.4738 1459064.0 -1 [106,] 13492 49.72191 439556.1857 1005004.2 1 [107,] 13493 49.72194 298925.6633 1420224.2 -1 [108,] 13494 49.72197 422758.7449 1006712.6 1 [109,] 13495 49.72200 297760.8270 1420248.0 -1 [110,] 13496 49.72202 423488.7271 1008102.9 1 [111,] 13497 49.72205 296591.9205 1420243.3 -1 [112,] 13498 49.72208 420610.0103 1009144.9 1 [113,] 13499 49.72210 296072.7530 1420119.3 -1 [114,] 13500 49.72213 420813.1970 1009818.3 1 [115,] 13501 49.72216 296166.5943 1420206.8 -1 [116,] 13502 49.72219 420461.8854 1009609.8 1 [117,] 13503 49.72221 295698.8204 1420227.5 -1 [118,] 13504 49.72224 419486.2537 1009210.5 1 [119,] 13505 49.72227 295698.2984 1420242.4 -1 [120,] 13506 49.72229 420228.9435 1008719.8 1 [121,] 13507 49.72232 295723.4296 1420395.4 -1 [122,] 13508 49.72235 419143.7183 1008591.9 1 [123,] 13509 49.72238 295017.1735 1420265.0 -1 [124,] 13510 49.72240 418275.2176 1008381.7 1 [125,] 13511 49.72243 295044.2070 1420386.6 -1 [126,] 13512 49.72246 417791.1458 1008446.7 1 [127,] 13513 49.72248 293475.3981 1420267.0 -1 [128,] 13514 49.72251 415084.3986 1008189.1 1 [129,] 13515 49.72254 295760.3094 1420222.3 -1 [130,] 13516 49.72257 425700.7471 1005738.0 1 [131,] 13517 49.72260 298055.6579 1420197.2 -1 [132,] 13518 49.72263 420922.1346 1008124.0 1 [133,] 13519 49.72265 295353.1768 1420456.2 -1 [134,] 13520 49.72268 419115.4071 1008121.5 1 [135,] 13521 49.72271 295629.7174 1420274.3 -1 [136,] 13522 49.72273 419747.8421 1008109.5 1 [137,] 13523 49.72276 295047.7792 1420113.4 -1 [138,] 13524 49.72279 417242.5141 1007996.8 1 [139,] 13525 49.72282 294336.6028 1420226.6 -1 [140,] 13526 49.72284 417897.6022 1007978.5 1 [141,] 13527 49.72287 295213.4635 1420057.7 -1 [142,] 13528 49.72290 418554.5564 1008054.5 1 [143,] 13529 49.72292 293806.9568 1420307.5 -1 [144,] 13530 49.72295 414340.3992 1007793.0 1 [145,] 13531 49.72298 293727.6801 1420257.8 -1 [146,] 13532 49.72301 418742.9715 1007958.6 1 [147,] 13533 49.72303 295933.8730 1420230.9 -1 [148,] 13534 49.72306 419954.3570 1007755.8 1 [149,] 13535 49.72309 294835.4015 1420089.0 -1 [150,] 13536 49.72311 417298.3289 1007982.5 1 [151,] 13537 49.72314 295514.9513 1420331.9 -1 [152,] 13538 49.72317 422592.0037 1007697.2 1 [153,] 13539 49.72320 297650.7289 1420343.1 -1 [154,] 13540 49.72322 421032.2814 1007832.4 1 [155,] 13541 49.72326 290631.6869 1420292.5 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 6459 49.52934 3.19571e+02 [2,] 7933 49.56970 3.20716e+02 [3,] 10301 49.63450 1.05310e+08 [4,] 10994 49.65348 3.22782e+02 [5,] 13485 49.72172 4.13429e+02 [6,] 13486 49.72174 3.89910e+02 [7,] 13487 49.72177 3.82339e+02 [8,] 13488 49.72180 3.78666e+02 [9,] 13489 49.72183 4.02545e+02 [10,] 13490 49.72186 4.86828e+02 [11,] 13491 49.72189 5.39690e+02 [12,] 13492 49.72191 5.50556e+02 [13,] 13493 49.72194 5.59940e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 210.891 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 93.546 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 101.079 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.147 PER MEG" [1] "Screened 57 O2 and CO2 values when pdsp not controlling" [1] "Screened 0 O2 values when pdo2 not controlling" [1] 385.3577 419.9305 393.4141 398.3227 398.9819 [1] -508.1175 -735.1249 -584.6100 -789.0817 -751.9515 [1] "Nominal linear calibrations:" [1] "co2scl = 0.979 co2off = -5.99 o2scla = -0.048 o2offa = -47.3" [1] "(dV/V)/(dXO2/XO2) = -4.332" [1] "(dV/V)/d(O2/N2) = -3.425" [1] "Finding cal and sample periods" [1] "Median Cal: 2.94 minutes" [1] "Average Cal: 2.91 minutes" [1] "Shortest Cal: 1.41 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 25" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-1HZ_DC8_20170218_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 482850 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-20Hz_DC8_20170218_R0.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 13965900 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00154" [1] "HS CO2 vs. PACAB: m = -0.00167, r^2 = 0.08" [1] "LS CO2 vs. PACAB: m = -0.00141, r^2 = 0.06" [1] "HS+LS LIH2O vs. PACAB: m = -0.000118" [1] "HS LIH2O vs. PACAB: m = -0.000128, r^2 = 0.76" [1] "LS LIH2O vs. PACAB: m = -0.000108, r^2 = 0.69" [1] "HS+LS CO2 vs. LIH2O: m = 26.9" [1] "HS CO2 vs. LIH2O: m = 29.2, r^2 = 0.46" [1] "LS CO2 vs. LIH2O: m = 24.6, r^2 = 0.32" [1] "APCO2 vs. PACAB: m = -0.0382, r^2 = 0.24" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0131" [1] "HS O2 vs. PACAB: m = 0.0586, r^2 = 0.04" [1] "LS O2 vs. PACAB: m = -0.0324, r^2 = 0.01" [1] "HS+LS O2 vs. LIH2O: m = -1120" [1] "HS O2 vs. LIH2O: m = -1290, r^2 = 0.42" [1] "LS O2 vs. LIH2O: m = -956, r^2 = 0.24" [1] "HS+LS O2 vs. PAO2: m = -45.1" [1] "HS O2 vs. PAO2: m = -43.3, r^2 = 0.77" [1] "LS O2 vs. PAO2: m = -46.9, r^2 = 0.91" [1] "HS+LS O2 vs. TPBOX: m = 11.4" [1] "HS O2 vs. TPBOX: m = 12.9, r^2 = 0.78" [1] "LS O2 vs. TPBOX: m = 9.86, r^2 = 0.64" [1] "APO vs. PACAB: m = 0.672, r^2 = 0.24" [1] "APO vs. PAO2: m = -36.9, r^2 = 0.17" [1] "APO vs. TPBOX: m = 17.4, r^2 = 0.39" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.492, r^2 = 0.19" [1] "LS CO2 vs. LiCor Cell P: m = 0.461, r^2 = 0.18" [1] "HS CO2 vs. CO2 Vol P: m = 0.623, r^2 = 0.48" [1] "LS CO2 vs. CO2 Vol P: m = 0.398, r^2 = 0.32" [1] "HS CO2 vs. SLOPE: m = 0.566, r^2 = 0.14" [1] "LS CO2 vs. SLOPE: m = 0.0278, r^2 = 0" [1] "HS O2 vs. O2 Vol P: m = -39, r^2 = 0.62" [1] "LS O2 vs. O2 Vol P: m = -43.9, r^2 = 0.83" [1] "HS O2 vs. O2 Cell T: m = 11.8, r^2 = 0.22" [1] "LS O2 vs. O2 Cell T: m = 21, r^2 = 0.55" [1] "HS O2 vs. CO2 Vol P: m = -27.7, r^2 = 0.61" [1] "LS O2 vs. CO2 Vol P: m = -30.5, r^2 = 0.64" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 5.88, r^2 = 0.12" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 1.28, r^2 = 0.01" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -27.7, r^2 = 0.61" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -30.5, r^2 = 0.64" [1] "HS O2 vs. LIH2O: m = -1190, r^2 = 0.38" [1] "LS O2 vs. LIH2O: m = -952, r^2 = 0.2" [1] "HS O2 vs. SLOPE: m = -3.42, r^2 = 0.31" [1] "LS O2 vs. SLOPE: m = 0.522, r^2 = 0.03" [1] "HS CO2 vs. Time: m = 30.911, r^2 = 0.94" [1] "LS CO2 vs. Time: m = 32.126, r^2 = 0.93" [1] "HS CO2 vs. Cylinder T: m = 0.666, r^2 = 0.09" [1] "LS CO2 vs. Cylinder T: m = -0.105, r^2 = 0.003" [1] "HS CO2 vs. Regulator T: m = -0.389, r^2 = 0.17" [1] "LS CO2 vs. Regulator T: m = -0.278, r^2 = 0.146" [1] "HS CO2 vs. Ref. Volumes T: m = 0.274, r^2 = 0.07" [1] "LS CO2 vs. Ref. Volumes T: m = 0.225, r^2 = 0.051" [1] "HS CO2 vs. Manifold T: m = -0.151, r^2 = 0.07" [1] "LS CO2 vs. Manifold T: m = -0.148, r^2 = 0.125" [1] "HS CO2 vs. Pump Box T: m = -0.163, r^2 = 0.21" [1] "LS CO2 vs. Pump Box T: m = -0.087, r^2 = 0.142" [1] "HS O2 vs. Cylinder T: m = -35.667, r^2 = 0.17" [1] "LS O2 vs. Cylinder T: m = -24.637, r^2 = 0.059" [1] "HS O2 vs. Regulator T: m = 20.437, r^2 = 0.3" [1] "LS O2 vs. Regulator T: m = 30.317, r^2 = 0.6" [1] "HS O2 vs. Ref. Volumes T: m = -4.461, r^2 = 0.01" [1] "LS O2 vs. Ref. Volumes T: m = 1.396, r^2 = 0.001" [1] "HS O2 vs. Manifold T: m = 17.303, r^2 = 0.6" [1] "LS O2 vs. Manifold T: m = 20.768, r^2 = 0.842" [1] "HS O2 vs. Pump Box T: m = 12.105, r^2 = 0.72" [1] "LS O2 vs. Pump Box T: m = 9.954, r^2 = 0.64" [1] "HS CO2 vs. WT P: m = -0.004, r^2 = 0.32" [1] "LS CO2 vs. WT P: m = -0.001, r^2 = 0.022" [1] "HS CO2 vs. SP P: m = -0.00287, r^2 = 0.25" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.311, r^2 = 0.44" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.317, r^2 = 0.44" [1] "LS CO2 vs. SP P: m = -0.00076, r^2 = 0.03" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.351, r^2 = 0.16" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.356, r^2 = 0.16" [1] "HS CO2 vs. WT FL: m = -0.157, r^2 = 0.25" [1] "LS CO2 vs. WT FL: m = -0.101, r^2 = 0.161" [1] "HS CO2 vs. SP FL: m = 0.049, r^2 = 0.06" [1] "LS CO2 vs. SP FL: m = -0.001, r^2 = 0" [1] "HS O2 vs. SLPDIFF: m = -1.2, r^2 = 0.14" [1] "LS O2 vs. SLPDIFF: m = -1.257, r^2 = 0.082" [1] "HS O2 vs. WT P: m = 0.071, r^2 = 0.06" [1] "LS O2 vs. WT P: m = -0.004, r^2 = 0" [1] "HS O2 vs. SP P: m = 0.058, r^2 = 0.03" [1] "LS O2 vs. SP P: m = -0.045, r^2 = 0.018" [1] "HS O2 vs. WT FL: m = 7.753, r^2 = 0.39" [1] "LS O2 vs. WT FL: m = 10.455, r^2 = 0.591" [1] "HS O2 vs. SP FL: m = 0.312, r^2 = 0" [1] "LS O2 vs. SP FL: m = 3.024, r^2 = 0.132" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 24.77, 57.01, 53.89, 60.27" [1] "Empirical LP O2 lag flow(s): 94.4, 91.4, 95.7, 91.9" [1] "Empirical LP CO2 lag time(s): 71.94, 49.92, 51.56, 48" [1] "Empirical LP CO2 lag flow(s): 94.4, 91.4, 95.7, 91.9" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.87" [1] "Median all HS CO2 SD = 0.87" [1] "Median all LS CO2 SD = 0.91" [1] "Median all LT CO2 SD = 0.81" [1] "Median all WT CO2 SD = 0.86" [1] "Median all HS or LS CO2 SD = 0.89" [1] "Median all cal O2 SD = 2.55" [1] "Median all HS O2 SD = 2.12" [1] "Median all LS O2 SD = 2.44" [1] "Median all LT O2 SD = 2.09" [1] "Median all WT O2 SD = 2.26" [1] "Median all HS or LS O2 SD = 2.28" [1] "Median all cal CO2 Slope = 0.02" [1] "Median all HS CO2 Slope = 0.03" [1] "Median all LS CO2 Slope = 0.1" [1] "Median all LT CO2 Slope = 0.06" [1] "Median all WT CO2 Slope = 0.04" [1] "Median all HS or LS CO2 Slope = 0.03" [1] "Median all cal O2 Slope = -0.13" [1] "Median all HS O2 Slope = -0.54" [1] "Median all LS O2 Slope = -0.35" [1] "Median all LT O2 Slope = 0.04" [1] "Median all WT O2 Slope = -0.05" [1] "Median all HS or LS O2 Slope = -0.35" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 5.88 per meg" [1] "Initial O2 Calibration Offset = -6.28 per meg" [1] "SD of O2 Calibration (post-takeoff) = 3.93 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -10.34 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -8.02 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 30473.02 62489.32" [1] "Time lag adjustments = 2 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 50.1 at 94.6 sccm" [1] "Median O2 delay + tlagff = 50.9 at 94.6 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 48.1 at 94.6 sccm" [1] "Median O2 delay from 3-way + tlagff = 48.9 at 94.6 sccm" [1] "after calc and ff lag: 30418.32 62421.65" [1] "2025-05-13 15:47:36 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 22.79520934 22.79520934 15.17505266 15.17505266 7.29464545 [6] 5.57475253 6.11366847 8.49681842 9.75103688 10.36676292 [11] 11.86500449 15.34224289 17.38007996 17.38007996 5.07800703 [16] 3.20629798 3.20629798 2.93870593 2.82177004 8.39790528 [21] 8.39790528 8.35501871 7.14175035 7.86695932 10.60975973 [26] 13.65333216 13.65333216 0.50426878 -2.03862314 0.43442179 [31] 0.97320720 -4.98223637 -5.12959888 -1.00134199 -0.92847095 [36] -2.84607398 -6.33549822 -6.33549822 -6.45853689 -3.97841421 [41] 4.05033356 4.05033356 3.42651040 -3.90470325 -3.53532275 [46] -3.53532275 -3.53532275 -5.42294590 -11.08303659 -11.08303659 [51] -11.08303659 -10.50658514 -11.62546184 -11.61927101 -11.61927101 [56] -11.55269597 -4.45711140 0.97339588 0.97339588 0.97339588 [61] 0.97339588 -8.16609071 -10.33218204 -10.33218204 -10.33218204 [66] 12.30183178 16.79954909 16.79954909 16.79954909 -4.34987040 [71] -6.63609137 -9.72116242 -12.02024488 -12.18081062 -12.18081062 [76] -10.64172439 -7.29076808 4.83980127 12.41325007 12.38417048 [81] 12.26539254 2.50619640 -8.54509972 -8.54509972 -7.62652493 [86] -1.90428022 -4.82457103 -4.82457103 -11.06760002 -15.02482010 [91] -7.92385243 -7.92385243 -6.85830360 -3.23986404 -3.47364020 [96] -3.47364020 -2.96633379 4.73711274 8.94856114 8.94856114 [101] 8.94856114 -6.20594598 -6.59613089 -6.65872373 -4.25575844 [106] 1.65279208 3.10651559 8.60773580 5.51462128 2.99403993 [111] 2.21168418 -5.49921583 -5.53153440 -7.70152822 -7.70152822 [116] -0.06171353 0.34579442 1.18827906 1.18827906 1.44904802 [121] 2.24142163 5.68243136 8.59953153 -0.03348032 -0.03348032 [126] -0.03348032 -0.03348032 3.10283325 4.97239336 1.51577735 [131] -1.72689622 -2.66524513 -6.41322028 -6.47896979 -6.47896979 [136] -6.47896979 -0.58746869 -0.58746869 -0.21293260 0.25312479 [141] 4.77958307 6.29929254 7.31875472 7.31875472 6.65721017 [146] 6.64979511 6.64979511 6.64979511 5.76707574 4.69522603 [151] 3.85435609 2.72024300 1.65351161 -5.47427895 -5.47427895 [156] -5.47427895 -5.47427895 -6.94192155 -6.94192155 -6.94192155 [161] -6.94192155 6.49740341 7.08646508 7.43999237 7.43999237 [166] 7.55605180 7.55968341 7.55968341 7.67755798 0.81755329 [171] -5.74687336 -4.65372059 -4.22249311 -4.22249311 1.12063126 [176] 1.12063126 1.12063126 1.12063126 8.92864193 6.45308235 [181] 5.31997296 5.31997296 -3.07302255 -6.09207671 -6.09207671 [186] -5.90515787 -1.06235565 4.59779543 4.59779543 4.59779543 [191] 5.08510364 6.63511827 10.75592739 11.74093765 11.74093765 [196] 12.88023507 12.88023507 13.09101607 13.30732255 13.91283299 [201] 13.91283299 13.91283299 13.91283299 14.39348839 9.36704740 [206] 9.36704740 9.36704740 3.37053315 -0.16844007 0.14200325 [211] 0.14200325 0.40492581 3.40315657 4.01510606 4.59306469 [216] 4.48582996 0.11274160 0.08579763 -1.12603071 -1.84947704 [221] 2.49150778 2.49150778 2.63526346 3.76133954 7.60724088 [226] 8.94139307 8.94139307 8.94139307 6.69191465 1.94079191 [231] 1.94079191 1.94079191 2.20333167 5.26541045 4.16046680 [236] 3.93971328 3.93971328 0.62613234 2.65939652 5.11304850 [241] 5.11304850 7.79354318 7.79354318 2.39646012 -1.41249608 [246] -8.80758777 -8.80758777 -8.80758777 -2.55155328 4.90526587 [251] 9.97120513 9.97120513 11.41673317 20.03755266 16.33113121 [256] 16.33113121 16.33113121 14.10340547 3.83640081 0.25976662 [261] 0.25976662 0.25976662 6.22194716 9.99466301 12.08328600 [266] 12.08328600 11.88881817 11.84474604 9.91135862 9.88175327 [271] 10.94665643 12.54451143 11.51077561 10.04213452 10.04213452 [276] 9.41595226 9.41595226 7.72467025 6.36812834 -6.43396747 [281] -6.43396747 -6.43396747 -6.43396747 4.85350304 6.22269474 [286] 6.22269474 6.22269474 5.72131021 5.18028032 5.18028032 [291] 5.18028032 8.17181131 12.25387936 13.12844863 13.44801838 [296] 13.44801838 10.80349060 10.50712880 9.82907430 8.26165539 [301] 3.50496336 3.50496336 3.50496336 3.50496336 1.13237855 [306] -0.51510492 -4.83824108 -7.47415865 -6.78618722 -4.92266096 [311] -4.92266096 -4.92266096 -4.92266096 1.11049910 4.45963997 [316] 4.45963997 4.45963997 1.06727347 1.06727347 1.06727347 [321] 1.02577287 7.80475770 7.27788598 7.21158155 7.15828101 [326] 4.23730341 3.44956811 3.44956811 3.44956811 3.89248323 [331] 4.01245693 5.98031049 8.72343162 10.25753681 12.89948115 [336] 12.89948115 12.89948115 12.89948115 14.39180069 14.39180069 [341] 12.41078985 10.20215905 -1.33039842 -1.33039842 -1.33039842 [346] -1.33039842 3.52578260 6.06135626 6.26495332 6.62121715 [351] 6.66768274 5.12165078 5.12165078 5.12165078 5.12165078 [356] -0.90829441 -1.30107472 -2.08293175 -2.66143599 5.46394068 [361] 5.46394068 5.46394068 5.46394068 7.12759302 9.54823104 [366] 9.13652067 8.54724208 6.03518753 0.73133423 0.70169381 [371] 0.70169381 0.70169381 -1.08105140 -0.93042989 -0.78155736 [376] 0.37729247 [1] 44.05212 46.19631 48.28001 50.25787 51.94615 53.48709 54.43200 [8] 55.87640 56.53280 57.49431 59.42217 61.59768 64.34607 66.86485 [15] 69.04946 70.86815 72.44788 74.11355 75.19933 75.87889 77.12027 [22] 79.32070 82.08798 84.63702 87.43935 89.98978 92.38224 95.41131 [29] 98.28153 102.02664 105.33902 109.22797 112.58223 116.31180 119.67778 [36] 122.94374 126.06583 128.86457 132.20520 134.88211 137.48542 139.74557 [43] 142.76810 145.40895 148.20528 150.84866 153.64295 156.31356 159.33321 [50] 161.89977 164.12591 166.45818 169.06079 171.49486 173.54650 175.57079 [57] 178.05045 180.15724 182.25111 184.49297 186.58286 188.73346 190.65687 [64] 193.55336 195.68994 197.79937 199.75042 202.01710 204.27022 206.39178 [71] 208.53878 210.73687 212.87117 215.02723 217.14815 219.27760 221.32028 [78] 223.34285 225.76144 227.89352 230.10279 232.49821 235.04001 237.43437 [85] 239.86929 242.44739 244.92806 247.21722 250.40820 252.97405 255.42628 [92] 257.80347 260.27687 262.67916 265.09814 267.52241 270.00370 272.45947 [99] 274.74787 276.95311 279.34443 282.11049 284.44314 286.68519 289.09662 [106] 291.24412 293.73111 296.21832 298.51551 300.47190 302.87206 305.42431 [113] 307.79178 310.13290 312.94522 315.22993 317.46085 319.80562 322.13199 [120] 324.20278 325.65773 326.75786 327.69048 328.97364 330.17760 331.27170 [127] 332.36014 333.46478 334.49571 335.44491 336.33536 337.26235 338.19389 [134] 339.16980 340.08721 340.98789 341.80822 342.87751 343.78577 344.82678 [141] 345.76861 346.55239 347.47513 348.44799 349.34568 350.16198 350.98963 [148] 351.77503 352.55903 353.25373 354.03032 354.78770 355.50008 356.18381 [155] 356.96459 357.74180 358.46544 359.14789 359.97332 360.74553 361.45532 [162] 362.35852 363.30894 364.35386 365.68528 366.76604 367.90938 368.91195 [169] 370.26564 371.37744 372.50548 373.68204 374.78789 375.87196 376.90165 [176] 378.04964 379.08900 380.27366 381.35583 382.34485 383.47154 384.52964 [183] 385.46360 386.63324 387.70709 388.92511 390.05470 391.22367 392.60211 [190] 393.99891 395.71167 397.30525 398.81464 400.30662 401.78313 403.36795 [197] 404.81891 406.51586 407.86600 409.59944 411.14957 412.47275 414.31564 [204] 415.72416 417.50907 419.07698 420.62625 422.18473 423.72404 425.28190 [211] 426.79338 428.33079 429.88746 431.41601 432.81711 434.96508 436.41847 [218] 437.96137 439.39783 440.94471 442.42305 443.99506 445.50434 447.06015 [225] 448.62538 450.31671 451.79656 453.42672 454.97178 456.59185 458.14435 [232] 459.76626 461.38771 462.92332 464.53234 466.12254 467.62231 469.17087 [239] 470.73032 472.26128 473.94630 475.41697 476.96617 478.50225 479.96152 [246] 481.52329 483.00387 484.48086 485.97737 487.49743 488.95766 490.40488 [253] 491.92293 493.41179 494.71669 496.29674 497.73735 499.24817 500.53652 [260] 502.16360 503.60901 505.02264 506.29235 507.83560 509.34319 510.78568 [267] 512.45545 513.96091 515.45485 516.86697 518.31195 519.68986 521.16223 [274] 522.57867 523.95493 525.35880 526.74859 528.10643 529.53672 530.87999 [281] 532.31110 533.58951 535.00095 536.37556 537.71265 539.09948 540.48384 [288] 541.82509 543.23996 544.52136 545.78724 547.35849 548.56583 549.83685 [295] 551.04674 552.25416 553.45694 554.61313 555.82559 556.88970 557.92212 [302] 558.95511 559.90381 560.83607 561.73714 562.55052 563.37156 564.16958 [309] 564.98089 565.78978 566.53469 567.49159 568.33699 569.10292 569.95779 [316] 570.59668 571.52821 572.26276 572.99857 573.74880 574.47986 575.23546 [323] 575.88670 576.73917 577.43355 578.17628 578.87422 579.48722 580.25456 [330] 580.94807 581.63262 582.32188 583.03654 583.72061 584.32526 585.12373 [337] 585.75292 586.48097 587.17294 587.87965 588.57786 589.29470 590.12412 [344] 590.89235 591.56102 592.28175 593.08709 593.72572 594.37952 595.11746 [351] 595.79540 596.47415 597.19263 597.85304 598.49460 599.25857 599.89696 [358] 600.62187 601.31572 601.99798 602.63739 603.23630 603.87521 604.61035 [365] 605.33218 606.00994 606.58463 607.49895 608.19784 608.93235 609.64792 [372] 610.35507 611.06319 611.71002 612.34933 612.96637 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 46 O2 values from manual exclude period 49.689662 to 49.690948" [1] "Not reporting 46 APO values from manual exclude period 49.689662 to 49.690948" [1] "Not reporting 46 CO2 values from manual exclude period 49.689662 to 49.690948" [1] "Not reporting 46 APO values from manual exclude period 49.689662 to 49.690948" [1] "Not reporting 111 smoothed O2 values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed APO values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed CO2 values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed APO values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed O2 values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed APO values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed CO2 values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Not reporting 111 smoothed APO values from manual exclude period 49.6890581423431 to 49.6903417988468" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170218_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 107300 items [1] 9 2683 26825 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] -382.3889 -387.0900 -364.9280 -347.1720 -349.8190 -364.4600 [1] 27483 [1] "Average Date / Time for slice RF09 = 2017-02-18 12:59:45.5397727489471" [1] "sum(lsel) = 2112" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -7.196 738.132 [1] -7.196 738.132 [1] 261.868 1007.196 [1] 3.469447e-17 9.999990e+05 [1] "highestmid = 655.669" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF09 APO_AO2 range = -377.14,-315.19" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170218_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 107300 items [1] 9 2683 26825 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] -770.4522 -755.1640 -715.8090 -685.0810 -683.6090 -687.0920 [1] 27491 [1] "Average Date / Time for slice RF09 = 2017-02-18 12:59:45.5397727489471" [1] "sum(lsel) = 2112" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -7.196 738.132 [1] -7.196 738.132 [1] 261.868 1007.196 [1] 3.469447e-17 9.999990e+05 [1] "highestmid = 655.669" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF09 O2_AO2 range = -706.49,-606.83" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170218_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 107300 items [1] 9 2683 26825 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] 423.8729 420.0680 416.7962 414.3267 413.5424 411.4184 [1] 27699 [1] "Average Date / Time for slice RF09 = 2017-02-18 12:59:55.3453168869019" [1] "sum(lsel) = 2114" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -7.196 738.132 [1] -7.196 738.132 [1] 261.868 1007.196 [1] 3.469447e-17 9.999990e+05 [1] "highestmid = 655.669" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF09 CO2_AO2 range = 402.6,413.75" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 64 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"