[1] "2025-05-13 15:43:38 MDT" options [1,] "file" "170215a" [2,] "flight" "RF08" [3,] "project" "ATOM2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "300" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "2" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "170215a" [1] "Reading in flight and plotting intervals" Read 17 records [1] "Reading in /scr/raf/stephens/AO2DAT/170215a.mr" Read 15304 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.37 seconds" [1] "New JOGEST = 2.37 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/170215a.hr" Read 61219 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 03:43:38 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 385.36 O2 = -508.1" [1] "position 2 cylinder OK30761 description: LS CO2 = 419.93 O2 = -735.1" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -584.8" [1] "position 4 cylinder OK30770 description: WT CO2 = 398.32 O2 = -789" [1] "position 5 cylinder OK30766 description: LP CO2 = 398.98 O2 = -751.4" [1] 385.3577 419.9301 393.4142 398.3209 398.9804 [1] -508.1282 -735.0973 -584.7821 -788.9875 -751.4372 [1] "Nominal linear calibrations:" [1] "co2scl = 0.984 co2off = -10.5 o2scla = -0.046 o2offa = -51.1" [1] "(dV/V)/(dXO2/XO2) = -4.57" [1] "(dV/V)/d(O2/N2) = -3.613" [1] "Reading in very high resolution timeseries" Read 306080 records [1] 306080 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 03:43:39 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 03:43:41 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.613" [1] "o2scaleavenew_drelVdrelP = -4.57" [1] "median(o2scalenew) = -3.642" [1] "Empirical dV/V vs dP/P relationship =-2.423, r^2 =0.007, damping =0.53" [1] "Tue May 13 03:43:41 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1414 14614 $icochar [1] "0" "0" "17:30:04" "46.727963" "46.37" "46.37" [7] "46.4" "46.43" "46.48" "46.52" "46.5295" "46.57" [13] "46.62" "46.66" "46.70" "16:53:00" "46.706" $ecochar [1] "367" "08:49:38" "367" "46.73" "46.73" "46.4" [7] "46.43" "46.48" "46.52" "46.57" "46.532" "46.62" [13] "46.66" "46.70" "46.73" "17:10:00" "46.710" $flag [1] "all" "LP" "LP" "donotreporto2" [5] "flight" "a" "b" "c" [9] "d" "e" "layer" "f" [13] "g" "h" "i" "MMS" [17] "donotreporto2" $ico2 [1] 0.00000 0.00000 46.72921 46.72796 46.37000 46.37000 46.40000 46.43000 [9] 46.48000 46.52000 46.52950 46.57000 46.62000 46.66000 46.70000 46.70347 [17] 46.70600 $eco2 [1] 367.00000 46.36780 367.00000 46.73000 46.73000 46.40000 46.43000 [8] 46.48000 46.52000 46.57000 46.53200 46.62000 46.66000 46.70000 [15] 46.73000 46.71528 46.71000 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1413 1413 46.36776 5.993472 -0.00107950 -0.00470185 -0.00470185 1413 1414 1414 46.36779 5.982590 -0.00133805 -0.00468335 -0.00468335 1414 1415 1415 46.36782 5.993224 -0.00131590 -0.00473560 -0.00473560 1415 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1413 10.5 6.00 16.00 650.50 -1 5.992313 5.992081 1414 10.5 4.75 16.25 501.75 1 5.981522 5.981235 1415 10.5 1.00 17.00 15.50 -1 5.992128 5.991845 vuvsigpdprcorr 1413 5.993091 1414 5.982239 1415 5.992863 [1] 0.3677638 0.3677908 0.3678180 [,1] [,2] [,3] [1,] 0.367775 -1 6 [2,] 0.367785 1 6 [3,] 0.367791 1 6 [4,] 0.367796 1 6 [5,] 0.367802 1 1 [6,] 0.367812 -1 1 [7,] 0.367818 -1 1 [8,] 0.367824 -1 1 [9,] 0.367829 -1 1 [10,] 0.367839 1 1 [11,] 0.367845 1 1 [12,] 0.367851 1 1 [13,] 0.367857 1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 14613 14613 46.72919 6.056587 -0.00068985 0.01249045 0.01249045 14613 14614 14614 46.72922 6.048005 -0.00082830 0.01270750 0.01270750 14614 14615 14615 46.72924 6.056738 -0.00100320 0.01249865 0.01249865 14615 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 14613 10.5 1.00 51.00 20190.50 -1 6.061058 6.060901 14614 10.5 4.75 51.75 5056.75 1 6.052582 6.052394 14615 10.5 6.00 52.00 25.50 -1 6.061315 6.061087 vuvsigpdprcorr 14613 6.058061 14614 6.049508 14615 6.058244 [1] 0.7291896 0.7292163 0.7292435 [,1] [,2] [,3] [1,] 0.729201 -1 1 [2,] 0.729210 1 1 [3,] 0.729216 1 6 [4,] 0.729222 1 6 [5,] 0.729228 1 6 [6,] 0.729238 -1 6 [7,] 0.729243 -1 6 [8,] 0.729249 -1 6 [9,] 0.729255 -1 6 [10,] 0.729264 1 6 [11,] 0.729270 1 6 [12,] 0.729276 1 6 [13,] 0.729282 1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1414 14614 $icochar [1] "0" "0" "17:30:04" "46.727963" "46.37" "46.37" [7] "46.4" "46.43" "46.48" "46.52" "46.5295" "46.57" [13] "46.62" "46.66" "46.70" "16:53:00" "46.706" $ecochar [1] "367" "08:49:38" "367" "46.73" "46.73" "46.4" [7] "46.43" "46.48" "46.52" "46.57" "46.532" "46.62" [13] "46.66" "46.70" "46.73" "17:10:00" "46.710" $flag [1] "all" "LP" "LP" "donotreporto2" [5] "flight" "a" "b" "c" [9] "d" "e" "layer" "f" [13] "g" "h" "i" "MMS" [17] "donotreporto2" $ico2 [1] 0.00000 0.00000 46.72921 46.72796 46.37000 46.37000 46.40000 46.43000 [9] 46.48000 46.52000 46.52950 46.57000 46.62000 46.66000 46.70000 46.70347 [17] 46.70600 $eco2 [1] 367.00000 46.36780 367.00000 46.73000 46.73000 46.40000 46.43000 [8] 46.48000 46.52000 46.57000 46.53200 46.62000 46.66000 46.70000 [15] 46.73000 46.71528 46.71000 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1413 1413 46.36776 5.993472 -0.00107950 -0.00470185 -0.00470185 1413 1414 1414 46.36779 5.982590 -0.00133805 -0.00468335 -0.00468335 1414 1415 1415 46.36782 5.993224 -0.00131590 -0.00473560 -0.00473560 1415 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1413 10.5 6.00 16.00 650.50 -1 5.992313 5.992081 1414 10.5 4.75 16.25 501.75 1 5.981522 5.981235 1415 10.5 1.00 17.00 15.50 -1 5.992128 5.991845 vuvsigpdprcorr 1413 5.993091 1414 5.982239 1415 5.992863 [1] 0.3677638 0.3677908 0.3678180 [,1] [,2] [,3] [1,] 0.367775 -1 6 [2,] 0.367785 1 6 [3,] 0.367791 1 6 [4,] 0.367796 1 6 [5,] 0.367802 1 1 [6,] 0.367812 -1 1 [7,] 0.367818 -1 1 [8,] 0.367824 -1 1 [9,] 0.367829 -1 1 [10,] 0.367839 1 1 [11,] 0.367845 1 1 [12,] 0.367851 1 1 [13,] 0.367857 1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 14613 14613 46.72919 6.056587 -0.00068985 0.01249045 0.01249045 14613 14614 14614 46.72922 6.048005 -0.00082830 0.01270750 0.01270750 14614 14615 14615 46.72924 6.056738 -0.00100320 0.01249865 0.01249865 14615 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 14613 10.5 1.00 51.00 20190.50 -1 6.061058 6.060901 14614 10.5 4.75 51.75 5056.75 1 6.052582 6.052394 14615 10.5 6.00 52.00 25.50 -1 6.061315 6.061087 vuvsigpdprcorr 14613 6.058061 14614 6.049508 14615 6.058244 [1] 0.7291896 0.7292163 0.7292435 [,1] [,2] [,3] [1,] 0.729201 -1 1 [2,] 0.729210 1 1 [3,] 0.729216 1 6 [4,] 0.729222 1 6 [5,] 0.729228 1 6 [6,] 0.729238 -1 6 [7,] 0.729243 -1 6 [8,] 0.729249 -1 6 [9,] 0.729255 -1 6 [10,] 0.729264 1 6 [11,] 0.729270 1 6 [12,] 0.729276 1 6 [13,] 0.729282 1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 03:44:26 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 03:44:26 PM MDT 2025 done recreating mr o2diffs" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 3.7588 4.2777 [1] -3.784593 -3.325570 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 176.243 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 82.584 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 78.582 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 45.075 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 0 [1] 72 [1] 99 [1] 99 [1] 99 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 83 46.33150 1977.3006 1000902.3 -1 [2,] 84 46.33153 1591.4332 998887.6 1 [3,] 85 46.33156 1163.6043 1000029.8 -1 [4,] 161 46.33364 867.0812 1000197.3 -1 [5,] 162 46.33366 1130.3062 999320.8 1 [6,] 163 46.33369 1446.2030 1000839.9 -1 [7,] 165 46.33374 1751.7722 1001142.7 -1 [8,] 241 46.33582 1410.2507 1000956.1 -1 [9,] 319 46.33793 1514.7275 1001485.9 -1 [10,] 469 46.34202 1795.2392 1002959.4 -1 [11,] 470 46.34204 1539.2122 1001136.8 1 [12,] 471 46.34207 1233.9235 1002364.2 -1 [13,] 473 46.34213 902.9005 1002063.1 -1 [14,] 545 46.34409 870.6590 1002339.6 -1 [15,] 546 46.34411 1157.7887 1001463.9 1 [16,] 547 46.34414 1480.8611 1003009.6 -1 [17,] 775 46.35036 1809.1422 1005475.5 -1 [18,] 776 46.35039 1516.3828 1003655.4 1 [19,] 777 46.35042 1177.8564 1004855.9 -1 [20,] 851 46.35244 866.7638 1006056.7 -1 [21,] 852 46.35246 1128.4621 1005186.9 1 [22,] 853 46.35249 1444.8142 1006730.4 -1 [23,] 855 46.35254 1756.5393 1007062.1 -1 [24,] 1233 46.36285 1786.6060 1011473.6 -1 [25,] 1234 46.36288 1510.3595 1009625.3 1 [26,] 1235 46.36291 1178.1143 1010784.9 -1 [27,] 1237 46.36296 893.7898 1010483.5 -1 [28,] 1387 46.36705 1598.5168 1007949.1 -1 [29,] 2105 46.38672 1188.4641 980535.0 -1 [30,] 2111 46.38688 927.6676 980012.0 -1 [31,] 2185 46.38890 775.1700 976770.3 -1 [32,] 2186 46.38892 1107.6559 975949.2 1 [33,] 2187 46.38895 1473.2798 977402.5 -1 [34,] 2337 46.39303 1887.8902 972173.6 -1 [35,] 2338 46.39306 1583.1193 970278.9 1 [36,] 2339 46.39308 1253.2452 971472.6 -1 [37,] 3683 46.42993 1263.5802 962650.0 -1 [38,] 3689 46.43009 1500.5972 962925.3 -1 [39,] 3763 46.43211 1708.3642 963096.1 -1 [40,] 3764 46.43214 1354.1565 961413.5 1 [41,] 3765 46.43217 973.4581 962338.8 -1 [42,] 5249 46.47279 1260.3138 976015.4 -1 [43,] 5255 46.47295 809.6038 975595.3 -1 [44,] 5329 46.47498 898.3643 976194.6 -1 [45,] 5330 46.47500 1275.8196 975290.4 1 [46,] 5331 46.47503 1645.3454 976939.0 -1 [47,] 5407 46.47711 1139.7681 976769.8 -1 [48,] 5481 46.47912 1201.0863 976870.1 -1 [49,] 5482 46.47915 1491.7792 975643.6 1 [50,] 5483 46.47918 1790.6750 977416.2 -1 [51,] 6705 46.51273 1240.3553 990826.0 -1 [52,] 6711 46.51289 810.9810 990433.2 -1 [53,] 6785 46.51492 924.9931 990979.5 -1 [54,] 6786 46.51494 1288.4972 990029.6 1 [55,] 6787 46.51497 1641.7765 991697.2 -1 [56,] 7747 46.54121 1376.7124 994067.5 -1 [57,] 7753 46.54138 1666.7192 994448.9 -1 [58,] 7827 46.54340 1626.3351 995535.4 -1 [59,] 7828 46.54343 1243.6629 993918.7 1 [60,] 7829 46.54345 865.6730 994809.4 -1 [61,] 7903 46.54547 934.7272 995996.0 -1 [62,] 7904 46.54549 1338.8083 995038.0 1 [63,] 7905 46.54552 1734.5733 996791.9 -1 [64,] 8813 46.57029 1276.0765 999807.7 -1 [65,] 8819 46.57045 959.0954 999404.6 -1 [66,] 8893 46.57247 765.6714 998632.1 -1 [67,] 8894 46.57250 1121.8059 997850.0 1 [68,] 8895 46.57253 1494.2736 999389.3 -1 [69,] 8969 46.57455 1697.5382 998995.7 -1 [70,] 8970 46.57458 1471.1857 997266.0 1 [71,] 8971 46.57461 1226.8280 998486.2 -1 [72,] 10385 46.61335 1270.3979 1012467.3 -1 [73,] 10465 46.61553 1699.9675 1012975.6 -1 [74,] 10466 46.61556 1341.8260 1011221.6 1 [75,] 10467 46.61558 944.7184 1012174.3 -1 [76,] 10541 46.61760 745.6068 1011830.9 -1 [77,] 10542 46.61763 1130.5062 1011047.8 1 [78,] 10543 46.61765 1543.0686 1012653.6 -1 [79,] 10617 46.61967 1813.0459 1012556.9 -1 [80,] 10618 46.61969 1547.4584 1010701.9 1 [81,] 10619 46.61972 1287.1084 1012008.6 -1 [82,] 11945 46.65605 1255.3891 1013952.7 -1 [83,] 11951 46.65622 799.1968 1013432.7 -1 [84,] 12025 46.65824 918.8792 1013097.8 -1 [85,] 12026 46.65827 1277.0156 1012124.4 1 [86,] 12027 46.65830 1625.9838 1013789.5 -1 [87,] 13425 46.69660 1327.4132 1014971.2 -1 [88,] 13431 46.69677 1647.3705 1015291.4 -1 [89,] 13503 46.69874 1661.5709 1015090.4 -1 [90,] 13504 46.69876 1280.2364 1013365.8 1 [91,] 13505 46.69879 870.5292 1014247.0 -1 [92,] 14615 46.72925 1440.1945 1018078.8 -1 [93,] 15079 46.74196 1679.3366 1025319.4 -1 [94,] 15080 46.74198 1300.2409 1023598.7 1 [95,] 15081 46.74201 893.8669 1024532.2 -1 [96,] 15157 46.74408 1029.9035 1027105.0 -1 [97,] 15231 46.74607 1169.0257 1030491.8 -1 [98,] 15232 46.74610 1453.3937 1029291.0 1 [99,] 15233 46.74613 1728.4624 1031142.3 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 6619 46.51039 319.067 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 176.243 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 82.584 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 78.582 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 45.075 PER MEG" [1] 385.3577 419.9301 393.4142 398.3209 398.9804 [1] -508.1282 -735.0973 -584.7821 -788.9875 -751.4372 [1] "Nominal linear calibrations:" [1] "co2scl = 0.984 co2off = -10.5 o2scla = -0.046 o2offa = -52" [1] "(dV/V)/(dXO2/XO2) = -4.551" [1] "(dV/V)/d(O2/N2) = -3.598" [1] "Finding cal and sample periods" [1] "Median Cal: 2.94 minutes" [1] "Average Cal: 2.84 minutes" [1] "Shortest Cal: 0.28 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 6 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 18" [1] "at: 27" [1] "at: 43" [1] "at: 47" [1] "at: 52" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-1HZ_DC8_20170215_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 559620 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-20Hz_DC8_20170215_R0.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 16183882 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00327" [1] "HS CO2 vs. PACAB: m = -0.00404, r^2 = 0.45" [1] "LS CO2 vs. PACAB: m = -0.0025, r^2 = 0.25" [1] "HS+LS LIH2O vs. PACAB: m = -0.000191" [1] "HS LIH2O vs. PACAB: m = -2e-04, r^2 = 0.91" [1] "LS LIH2O vs. PACAB: m = -0.000183, r^2 = 0.91" [1] "HS+LS CO2 vs. LIH2O: m = 20.7" [1] "HS CO2 vs. LIH2O: m = 23.2, r^2 = 0.73" [1] "LS CO2 vs. LIH2O: m = 18.2, r^2 = 0.49" [1] "APCO2 vs. PACAB: m = -0.00692, r^2 = 0.02" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.221" [1] "HS O2 vs. PACAB: m = 0.26, r^2 = 0.78" [1] "LS O2 vs. PACAB: m = 0.182, r^2 = 0.48" [1] "HS+LS O2 vs. LIH2O: m = -1240" [1] "HS O2 vs. LIH2O: m = -1340, r^2 = 0.9" [1] "LS O2 vs. LIH2O: m = -1140, r^2 = 0.6" [1] "HS+LS O2 vs. PAO2: m = -10.7" [1] "HS O2 vs. PAO2: m = -14.8, r^2 = 0.18" [1] "LS O2 vs. PAO2: m = -6.54, r^2 = 0.02" [1] "HS+LS O2 vs. TPBOX: m = 7.88" [1] "HS O2 vs. TPBOX: m = 7.56, r^2 = 0.96" [1] "LS O2 vs. TPBOX: m = 8.21, r^2 = 0.82" [1] "APO vs. PACAB: m = 0.129, r^2 = 0.02" [1] "APO vs. PAO2: m = -26.2, r^2 = 0.34" [1] "APO vs. TPBOX: m = 10.4, r^2 = 0.49" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.404, r^2 = 0.18" [1] "LS CO2 vs. LiCor Cell P: m = 0.316, r^2 = 0.19" [1] "HS CO2 vs. CO2 Vol P: m = 0.472, r^2 = 0.65" [1] "LS CO2 vs. CO2 Vol P: m = 0.36, r^2 = 0.59" [1] "HS CO2 vs. SLOPE: m = -0.0769, r^2 = 0" [1] "LS CO2 vs. SLOPE: m = -0.473, r^2 = 0.15" [1] "HS O2 vs. O2 Vol P: m = -16.2, r^2 = 0.15" [1] "LS O2 vs. O2 Vol P: m = -8.29, r^2 = 0.02" [1] "HS O2 vs. O2 Cell T: m = 1.09, r^2 = 0" [1] "LS O2 vs. O2 Cell T: m = -7.49, r^2 = 0.07" [1] "HS O2 vs. CO2 Vol P: m = -24.1, r^2 = 0.76" [1] "LS O2 vs. CO2 Vol P: m = -24.3, r^2 = 0.63" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 5.45, r^2 = 0.02" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -6.01, r^2 = 0.12" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -24.1, r^2 = 0.76" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -24.3, r^2 = 0.63" [1] "HS O2 vs. LIH2O: m = -1300, r^2 = 0.87" [1] "LS O2 vs. LIH2O: m = -1280, r^2 = 0.58" [1] "HS O2 vs. SLOPE: m = -0.0399, r^2 = 0" [1] "LS O2 vs. SLOPE: m = -0.728, r^2 = 0.03" [1] "HS CO2 vs. Time: m = 20.596, r^2 = 0.92" [1] "LS CO2 vs. Time: m = 21.059, r^2 = 0.92" [1] "HS CO2 vs. Cylinder T: m = 0.535, r^2 = 0.13" [1] "LS CO2 vs. Cylinder T: m = 0.362, r^2 = 0.101" [1] "HS CO2 vs. Regulator T: m = -0.499, r^2 = 0.33" [1] "LS CO2 vs. Regulator T: m = -0.303, r^2 = 0.211" [1] "HS CO2 vs. Ref. Volumes T: m = 0.141, r^2 = 0.03" [1] "LS CO2 vs. Ref. Volumes T: m = 0.161, r^2 = 0.07" [1] "HS CO2 vs. Manifold T: m = -0.323, r^2 = 0.56" [1] "LS CO2 vs. Manifold T: m = -0.278, r^2 = 0.519" [1] "HS CO2 vs. Pump Box T: m = -0.109, r^2 = 0.37" [1] "LS CO2 vs. Pump Box T: m = -0.112, r^2 = 0.477" [1] "HS O2 vs. Cylinder T: m = -50.663, r^2 = 0.54" [1] "LS O2 vs. Cylinder T: m = -42.926, r^2 = 0.331" [1] "HS O2 vs. Regulator T: m = 9.682, r^2 = 0.06" [1] "LS O2 vs. Regulator T: m = -0.634, r^2 = 0" [1] "HS O2 vs. Ref. Volumes T: m = -24.428, r^2 = 0.41" [1] "LS O2 vs. Ref. Volumes T: m = -29.27, r^2 = 0.545" [1] "HS O2 vs. Manifold T: m = 11.509, r^2 = 0.32" [1] "LS O2 vs. Manifold T: m = 7.866, r^2 = 0.097" [1] "HS O2 vs. Pump Box T: m = 7.737, r^2 = 0.85" [1] "LS O2 vs. Pump Box T: m = 8.889, r^2 = 0.701" [1] "HS CO2 vs. WT P: m = -0.003, r^2 = 0.31" [1] "LS CO2 vs. WT P: m = -0.002, r^2 = 0.26" [1] "HS CO2 vs. SP P: m = -0.00331, r^2 = 0.3" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.035, r^2 = 0.28" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.038, r^2 = 0.28" [1] "LS CO2 vs. SP P: m = -0.00187, r^2 = 0.19" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.032, r^2 = 0.18" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.033, r^2 = 0.18" [1] "HS CO2 vs. WT FL: m = -0.215, r^2 = 0.56" [1] "LS CO2 vs. WT FL: m = -0.197, r^2 = 0.564" [1] "HS CO2 vs. SP FL: m = 0.04, r^2 = 0.06" [1] "LS CO2 vs. SP FL: m = 0.024, r^2 = 0.037" [1] "HS O2 vs. SLPDIFF: m = -1.31, r^2 = 0.16" [1] "LS O2 vs. SLPDIFF: m = -1.504, r^2 = 0.324" [1] "HS O2 vs. WT P: m = 0.255, r^2 = 0.77" [1] "LS O2 vs. WT P: m = 0.221, r^2 = 0.504" [1] "HS O2 vs. SP P: m = 0.272, r^2 = 0.78" [1] "LS O2 vs. SP P: m = 0.216, r^2 = 0.44" [1] "HS O2 vs. WT FL: m = 6.064, r^2 = 0.2" [1] "LS O2 vs. WT FL: m = 5.681, r^2 = 0.11" [1] "HS O2 vs. SP FL: m = -6.251, r^2 = 0.63" [1] "LS O2 vs. SP FL: m = -5.073, r^2 = 0.38" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 49.43, 64.46" [1] "Empirical LP O2 lag flow(s): 107.2, 91.3" [1] "Empirical LP CO2 lag time(s): 70.6, 50.29" [1] "Empirical LP CO2 lag flow(s): 107.2, 91.3" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.83" [1] "Median all HS CO2 SD = 0.84" [1] "Median all LS CO2 SD = 0.82" [1] "Median all LT CO2 SD = 0.78" [1] "Median all WT CO2 SD = 0.83" [1] "Median all HS or LS CO2 SD = 0.84" [1] "Median all cal O2 SD = 2.57" [1] "Median all HS O2 SD = 2.23" [1] "Median all LS O2 SD = 2.9" [1] "Median all LT O2 SD = 2.26" [1] "Median all WT O2 SD = 2.56" [1] "Median all HS or LS O2 SD = 2.45" [1] "Median all cal CO2 Slope = 0.05" [1] "Median all HS CO2 Slope = 0.02" [1] "Median all LS CO2 Slope = 0.06" [1] "Median all LT CO2 Slope = 0.04" [1] "Median all WT CO2 Slope = 0.13" [1] "Median all HS or LS CO2 Slope = 0.05" [1] "Median all cal O2 Slope = 0.12" [1] "Median all HS O2 Slope = -0.15" [1] "Median all LS O2 Slope = 0.48" [1] "Median all LT O2 Slope = 0.93" [1] "Median all WT O2 Slope = -0.03" [1] "Median all HS or LS O2 Slope = 0.01" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 12.19 per meg" [1] "Initial O2 Calibration Offset = -22.96 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -26.27 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -21.28 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 28442.45 64631.69" [1] "Time lag adjustments = 2 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 47.6 at 99.9 sccm" [1] "Median O2 delay + tlagff = 48.3 at 99.9 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 46 at 99.9 sccm" [1] "Median O2 delay from 3-way + tlagff = 46.8 at 99.9 sccm" [1] "after calc and ff lag: 28393.56 64587.18" [1] "2025-05-13 15:45:14 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 11.26111884 12.63530919 -0.86250512 0.37930763 1.13161780 [6] 2.11677934 3.72398792 3.72398792 3.72398792 3.72398792 [11] 4.63079290 4.88747389 4.79062112 2.93560274 2.06975079 [16] 0.48160524 -0.20560882 -0.69495497 -0.69495497 8.54133663 [21] 12.40367648 17.05592927 21.80035617 13.84607676 13.84607676 [26] 13.84607676 13.84607676 -6.33447517 -13.19984693 -17.48248945 [31] -17.48248945 -10.65269520 7.42926086 13.17683254 13.17683254 [36] 12.38435974 -12.13794479 -12.13794479 -12.13794479 -11.99694291 [41] -7.42173847 -6.52852183 -6.52852183 -6.52852183 9.91665028 [46] 9.91665028 9.91354793 9.55007747 -5.95912956 -5.95912956 [51] -5.95912956 -5.82255377 -8.72975960 -9.84108774 -9.49708697 [56] -11.65472304 -10.30408560 -9.85805854 -10.70274572 -10.70274572 [61] -0.46192157 -5.50421667 -11.00115990 -13.10657850 -13.10657850 [66] 6.48777748 6.48777748 5.90288831 2.69170758 -3.71674038 [71] -3.71674038 -1.48568783 2.40600955 6.65735261 5.12492011 [76] -2.28109633 -2.28109633 -1.99532291 -1.04270867 1.67078616 [81] 2.32701092 2.56161058 4.09058497 5.06249053 6.49923133 [86] 9.53118142 16.13896434 16.13896434 16.13896434 16.07986132 [91] 3.59266094 2.92290952 2.74942310 2.74942310 0.63777710 [96] 0.63777710 -0.53481089 -7.11643023 -6.72772678 -6.26348676 [101] -6.26348676 -6.26348676 -5.25392751 -2.45052851 -2.45052851 [106] -2.45052851 -2.45052851 -0.05865734 0.04821430 0.25495748 [111] 0.38782401 -11.14391668 -11.14391668 -11.14391668 -11.43090271 [116] -21.66915410 -26.53620872 -26.53620872 -26.53620872 -18.20017966 [121] -5.19727944 4.06736434 7.31155000 7.31155000 3.13734947 [126] 3.13734947 3.13734947 2.91783735 -6.83604827 -8.31011698 [131] -8.31011698 -8.31011698 -6.28165770 -6.28165770 -6.28165770 [136] -6.89548783 -11.66709220 -13.12713320 -15.19268196 -16.28847408 [141] -13.72117776 -10.10109984 -10.10109984 -10.10109984 -10.10109984 [146] -6.18165141 -2.75708143 -1.14752273 -1.14752273 -1.37678855 [151] -1.37678855 -1.37678855 -1.37678855 -9.18588624 -12.55541996 [156] -17.43932485 -20.52289119 -9.71542407 -7.86940040 -7.86940040 [161] -7.86940040 -9.51768826 -11.98089418 -9.33731065 -5.33783044 [166] -2.48549898 5.59762622 6.55482967 6.55482967 6.55482967 [171] 7.62092938 7.62092938 7.62092938 7.62092938 -0.37523450 [176] -5.64765731 -6.23723125 -6.23723125 -6.16958717 -6.11288525 [181] -6.11288525 -11.06343879 -16.12861443 -14.62571257 -14.62571257 [186] -14.62571257 -14.62571257 -8.23033810 -1.14109001 -0.77265631 [191] -0.77265631 -6.25608283 -6.25608283 -6.53388661 -8.26758468 [196] -2.49969072 -1.73610974 -1.87432540 -1.87432540 -1.88919396 [201] -12.64631127 -12.73856893 -13.99672291 -15.72244453 -3.61816438 [206] -3.61816438 -3.61816438 -3.61816438 -11.52249106 -5.75046842 [211] -5.05368378 -5.05368378 -5.59117016 -5.70697714 -6.58800642 [216] -10.46308220 -7.01044453 -6.01656832 -6.01656832 -6.01656832 [221] -6.38805251 -12.97124402 -12.97124402 -12.97124402 -12.97124402 [226] -18.36657511 -19.04788686 -19.41610504 -19.53093945 -3.36431118 [231] -3.36431118 -3.36431118 -5.73720564 -20.52503725 -20.52503725 [236] -20.52503725 -20.52503725 -9.44769127 -11.98382303 -14.04115496 [241] -14.04115496 -16.12087596 -20.18269402 -20.12171022 -19.58476934 [246] -19.37359400 -19.42430909 -19.42430909 -19.42430909 -19.42430909 [251] -17.04796236 -11.69740347 -8.61764182 -8.61764182 -14.07322917 [256] -16.90136635 -18.99744809 -23.59288776 -18.50172830 -8.76445424 [261] -8.76445424 -8.76445424 -11.79481863 -18.28220101 -18.28220101 [266] -18.28220101 -18.28220101 -24.72288363 -20.84909761 -20.27868777 [271] -20.23682815 -15.19284362 -15.19284362 -14.99681477 -14.42205163 [276] -12.94042181 -12.94042181 -12.94042181 -12.94042181 -11.03080171 [281] -8.95462843 -10.45442882 -10.45442882 -14.69761821 -19.28814365 [286] -17.50192386 -13.05423984 -12.98448379 -3.03695025 -3.03695025 [291] -3.03695025 -2.60467973 -10.93012175 -10.66506548 -10.66506548 [296] -10.66506548 -11.30018536 -11.60172699 -13.53857162 -17.16075054 [301] -19.92008797 -17.05014991 -17.05014991 -17.05014991 -17.05014991 [306] -17.29747536 -14.99277434 -11.51556268 -11.03800421 -20.03094068 [311] -20.03094068 -20.03094068 -20.03094068 0.36384160 2.92036311 [316] 5.56136979 6.94474447 -4.45891971 -11.66375336 -11.66375336 [321] -11.66375336 -11.47517303 -4.51849449 -4.51849449 -4.51849449 [326] -6.38455180 -13.23128268 -15.85860954 -17.22120511 -17.75792990 [331] -8.29105916 -8.76507748 -8.76507748 -8.76507748 -11.01272940 [336] -11.01272940 -11.01272940 -11.01272940 -15.52325938 -19.65205768 [341] -19.36199257 -19.02539124 -17.52851094 -15.41902796 -14.06937673 [346] -12.63255788 -12.15108226 -3.73349419 -3.73349419 -3.73349419 [351] -3.73349419 -3.82328609 -3.82328609 -3.82328609 -3.82328609 [356] -5.81197709 -8.18950600 -9.11614198 -9.11614198 -10.25432641 [361] -16.07843847 -16.07843847 -16.07843847 -16.07843847 -9.71053279 [366] -9.60156288 -8.94417661 -8.33729559 3.75620280 3.75620280 [371] 3.75620280 3.75620280 -4.65483725 -12.48701102 -12.48701102 [376] -12.48701102 -12.69412157 -12.06549439 -12.77043074 -12.96390683 [381] -12.96390683 -4.62490716 -4.62490716 -4.62490716 -4.62490716 [386] -11.91563665 -11.91563665 -11.67705551 -11.20371473 -12.41213513 [391] -11.90254523 -11.33721421 -10.72935306 -8.55981510 -5.30921519 [396] -5.30921519 -5.30921519 -5.30921519 -13.51603507 -13.51603507 [401] -14.09733960 -16.16610957 1.77263275 1.77263275 1.77263275 [406] 1.77263275 -13.97917161 -13.97917161 -13.79588399 -12.60523721 [411] -3.63620355 -3.11058006 -3.11058006 -3.11058006 -7.29676811 [416] -12.70161523 -12.70161523 -13.50929163 -18.65062667 -17.95299045 [421] -17.95299045 -17.95299045 -17.95299045 -19.23489881 -18.79952337 [426] -16.09579270 -13.76281621 -8.82186938 -8.21847356 -8.21847356 [431] -8.21847356 -9.63639032 -10.82467018 -10.60059081 -9.45421695 [436] -9.16645186 -10.16509582 -10.16509582 -10.16509582 -10.18582719 [441] -13.10502589 -11.56463306 -9.18514054 -9.18514054 0.49202757 [446] 0.49202757 0.49202757 0.49202757 -2.51630477 -11.61582072 [451] -15.20716020 -15.62487561 -19.97787136 -24.00137511 -24.00137511 [456] -24.00137511 -22.03423381 -16.20910527 -10.03813020 -4.25845247 [461] -1.76919294 0.55678409 0.55678409 0.48435963 -0.76585751 [466] -3.28607999 -11.15770657 -18.37888293 -18.37888293 -20.83696487 [471] -20.83696487 [1] 47.01427 47.85888 48.69943 49.46765 49.95242 50.58724 51.41244 [8] 52.33746 53.42581 54.41987 55.82821 57.21029 59.69451 62.65136 [15] 65.64515 68.56274 71.43338 74.15247 76.33987 78.41805 79.75330 [22] 81.03676 82.46231 83.59911 84.82198 86.50562 88.28561 90.10506 [29] 91.80172 94.57356 96.13357 98.70597 100.91599 103.30990 105.59831 [36] 107.49238 109.74976 111.82702 113.49113 115.36839 117.40395 119.39581 [43] 121.59604 124.04926 126.96550 129.68742 131.78430 134.40340 136.21264 [50] 137.78029 139.29567 141.01486 144.33380 147.04997 151.26272 155.33142 [57] 159.76543 163.70334 167.97796 172.43146 176.85192 180.85577 184.84970 [64] 188.75470 192.35580 195.72331 199.08545 202.65723 205.66214 208.88827 [71] 211.80144 214.54404 217.43808 220.51875 223.03732 225.62378 227.88386 [78] 230.38469 232.04805 234.56972 237.00451 238.76578 240.41099 242.07242 [85] 243.49152 245.07073 246.45371 248.19008 249.70771 251.27928 252.84999 [92] 254.35206 255.98619 257.41725 258.93046 260.51063 261.63264 263.37446 [99] 264.98799 266.49966 267.97572 269.39617 270.74333 272.24302 273.68731 [106] 275.44413 276.89718 278.38001 279.83131 281.35452 282.78942 284.13520 [113] 285.65288 287.08963 288.44906 289.75919 291.33419 292.66200 294.12628 [120] 295.50056 296.95400 298.34943 299.85194 301.23637 302.50328 303.57188 [127] 304.51755 305.53479 306.45416 307.65431 308.90577 309.70582 310.96921 [134] 311.86541 313.09657 314.10310 315.09776 316.08037 317.11202 318.21096 [141] 319.20257 320.22152 321.26009 322.21167 323.28318 324.24124 325.32868 [148] 326.35699 327.29087 328.08363 329.03001 329.89496 330.89746 331.63021 [155] 332.53284 333.38002 334.59818 335.42602 336.35227 337.06562 338.12349 [162] 339.02365 340.02614 340.71101 341.75289 342.57990 343.47021 344.17773 [169] 345.21682 346.06521 346.98062 347.81499 348.67986 349.38454 350.27260 [176] 351.34458 352.30145 353.51387 354.69288 356.01878 357.31534 358.94580 [183] 360.23146 361.32755 362.83699 364.08788 365.34284 366.54541 367.75421 [190] 368.99292 370.17326 371.32149 372.46762 373.76640 374.93830 376.08490 [197] 377.15905 378.23144 379.40771 380.42073 381.67328 382.84808 383.95981 [204] 385.17021 386.28734 387.33217 388.62505 389.99465 391.20251 392.42350 [211] 393.63104 394.84637 395.85073 397.23043 398.57205 400.06903 401.40982 [218] 402.75597 404.07134 405.45611 406.68477 408.22080 409.58916 410.84353 [225] 412.22955 413.60911 415.04079 416.34179 417.48958 419.08598 420.42499 [232] 421.77244 423.44795 424.58643 425.87055 427.21768 428.41945 429.64906 [239] 430.84602 432.09361 433.31407 434.57286 435.84503 436.81859 438.33153 [246] 439.51350 440.73196 441.91852 443.05776 444.26464 445.47413 446.61030 [253] 447.95155 449.17875 450.36564 451.64972 452.87030 454.42048 455.42540 [260] 456.83586 458.04053 459.26753 460.55538 461.68853 462.91422 464.15483 [267] 465.32492 466.40412 467.69881 468.90251 470.05273 471.19202 472.43943 [274] 473.61853 474.85711 476.18763 477.27039 478.45383 479.40824 480.74825 [281] 481.93781 483.06360 484.18123 485.63096 486.76270 487.76534 488.88383 [288] 490.04761 491.10420 492.22216 493.34198 494.47311 495.46680 496.71646 [295] 497.70636 498.59694 499.72596 500.69190 501.58478 502.79510 503.83735 [302] 504.88846 505.82002 506.70025 507.69153 508.35757 509.38382 510.32682 [309] 511.30381 512.16947 513.04355 513.80292 514.55731 515.23171 515.90797 [316] 516.60657 517.18460 517.74321 518.26532 518.74304 519.26071 519.73501 [323] 520.22748 520.76373 521.24081 521.69899 522.09903 522.65126 523.13067 [330] 523.49725 524.04024 524.47368 524.92572 525.40785 525.94797 526.34481 [337] 526.76486 527.22872 527.69699 528.13386 528.53539 529.00133 529.51453 [344] 529.96414 530.36929 530.80060 531.26135 531.75223 532.30090 532.88181 [351] 533.40649 534.02469 534.54923 535.09350 535.55954 536.25355 536.81715 [358] 537.42271 538.00047 538.64760 539.20267 539.75755 540.31565 540.94591 [365] 541.52158 542.13367 542.72325 543.26753 543.92179 544.43334 544.98664 [372] 545.48432 546.02981 546.57491 547.09340 547.62408 548.14365 548.70929 [379] 549.28296 549.79750 550.36690 550.95923 551.48586 552.04462 552.69727 [386] 553.23594 553.75723 554.29565 554.87614 555.40175 555.92732 556.42244 [393] 557.04384 557.59007 558.14291 558.70333 559.22954 559.77515 560.37908 [400] 560.97369 561.65640 562.32970 563.06034 563.77566 564.47585 565.25658 [407] 565.95043 566.49827 567.34239 568.01905 568.81076 569.42976 570.05204 [414] 570.72892 571.43785 572.14754 572.92033 573.49820 574.38016 575.15712 [421] 575.76053 576.66200 577.44476 578.27508 579.03187 579.78467 580.55435 [428] 581.32484 582.09348 582.86098 583.62722 584.33954 584.94651 585.81968 [435] 586.53720 587.40754 588.09337 588.85829 589.59737 590.36204 591.02213 [442] 591.84897 592.57442 593.21351 593.97433 594.61346 595.47229 596.22972 [449] 596.91861 597.65990 598.40241 599.06803 599.79096 600.42965 601.19708 [456] 601.92035 602.56703 603.33262 604.05919 604.73969 605.57603 606.28415 [463] 606.96648 607.63132 608.32030 609.02846 609.75451 610.43131 611.14741 [470] 611.86096 612.54793 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 74 O2 values from manual exclude period 46.727963 to 46.73" [1] "Not reporting 74 APO values from manual exclude period 46.727963 to 46.73" [1] "Not reporting 145 O2 values from manual exclude period 46.706 to 46.71" [1] "Not reporting 145 APO values from manual exclude period 46.706 to 46.71" [1] "Not reporting 136 smoothed O2 values from manual exclude period 46.7273247090424 to 46.7293707049057" [1] "Not reporting 136 smoothed APO values from manual exclude period 46.7273247090424 to 46.7293707049057" [1] "Not reporting 346 smoothed O2 values from manual exclude period 46.7054391804304 to 46.7094376189974" [1] "Not reporting 346 smoothed APO values from manual exclude period 46.7054391804304 to 46.7094376189974" [1] "Not reporting 136 smoothed O2 values from manual exclude period 46.7273247090424 to 46.7293707049057" [1] "Not reporting 136 smoothed APO values from manual exclude period 46.7273247090424 to 46.7293707049057" [1] "Not reporting 346 smoothed O2 values from manual exclude period 46.7054391804304 to 46.7094376189974" [1] "Not reporting 346 smoothed APO values from manual exclude period 46.7054391804304 to 46.7094376189974" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170215_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 124360 items [1] 8 3110 31090 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] -382.3889 -387.0900 -364.9280 -347.1720 -349.8190 -364.4600 [1] 27488 [1] "Average Date / Time for slice RF08 = 2017-02-15 13:12:09.15086889266968" [1] "sum(lsel) = 2532" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -3.494 793.411 [1] -3.494 793.411 [1] 206.589 1003.494 [1] 0 999999 [1] "highestmid = 724.833" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF08 APO_AO2 range = -362.75,-309.08" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170215_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 124360 items [1] 8 3110 31090 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] -770.4522 -755.1640 -715.8090 -685.0810 -683.6090 -687.0920 [1] 27497 [1] "Average Date / Time for slice RF08 = 2017-02-15 13:12:09.15086889266968" [1] "sum(lsel) = 2532" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -3.494 793.411 [1] -3.494 793.411 [1] 206.589 1003.494 [1] 0 999999 [1] "highestmid = 724.833" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF08 O2_AO2 range = -674.8,-593.5" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170215_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 124360 items [1] 8 3110 31090 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] 423.8729 420.0680 416.7962 414.3267 413.5424 411.4184 [1] 27706 [1] "Average Date / Time for slice RF08 = 2017-02-15 13:16:24.5542635917664" [1] "sum(lsel) = 2580" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -12.069 793.860 [1] -12.069 793.860 [1] 206.140 1012.069 [1] 0 999999 [1] "highestmid = 724.833" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF08 CO2_AO2 range = 403.25,413.24" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "making html" [1] "making index html"