[1] "2025-05-13 15:34:28 MDT" options [1,] "file" "170205a" [2,] "flight" "RF05" [3,] "project" "ATOM2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "300" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "2" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "170205a" [1] "Reading in flight and plotting intervals" Read 24 records [1] "Reading in /scr/raf/stephens/AO2DAT/170205a.mr" Read 16183 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.36 seconds" [1] "New JOGEST = 2.36 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/170205a.hr" Read 64734 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 03:34:28 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 385.36 O2 = -508.2" [1] "position 2 cylinder OK30761 description: LS CO2 = 419.93 O2 = -735" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.41 O2 = -585.4" [1] "position 4 cylinder OK30766 description: WT CO2 = 398.98 O2 = -749.7" [1] "position 5 cylinder OK30770 description: LP CO2 = 398.31 O2 = -788.7" [1] 385.3576 419.9288 393.4148 398.9753 398.3147 [1] -508.1637 -735.0052 -585.3558 -749.7229 -788.6734 [1] "Nominal linear calibrations:" [1] "co2scl = 0.973 co2off = -11.75 o2scla = -0.048 o2offa = -33.1" [1] "(dV/V)/(dXO2/XO2) = -4.324" [1] "(dV/V)/d(O2/N2) = -3.418" [1] "Reading in very high resolution timeseries" Read 323660 records [1] 323660 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 03:34:29 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 03:34:31 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.418" [1] "o2scaleavenew_drelVdrelP = -4.324" [1] "median(o2scalenew) = -3.485" [1] "Empirical dV/V vs dP/P relationship =-2.292, r^2 =0.001, damping =0.53" [1] "Tue May 13 03:34:32 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "Plotting Jog Shapes" [1] "Tue May 13 03:35:21 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 794761.332192 SECONDS" [1] "Tue May 13 03:35:21 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 3.5107 3.9931 [1] -3.560547 -3.130418 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 478.458 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 534.118 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 534.655 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -13.228 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 10 [1] 166 [1] 200 [1] 200 [1] 204 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 80 36.79674 2099.38467 990291.0 -1 [2,] 81 36.79677 1865.73147 988188.2 1 [3,] 82 36.79680 1555.04810 989722.4 -1 [4,] 84 36.79685 1207.61144 989414.5 -1 [5,] 156 36.79882 1158.53230 990196.4 -1 [6,] 157 36.79885 1359.71853 989032.8 1 [7,] 158 36.79887 1610.76852 990715.4 -1 [8,] 160 36.79893 2017.31377 991118.5 -1 [9,] 310 36.80301 1791.77918 992518.0 -1 [10,] 312 36.80306 2114.79556 992830.2 -1 [11,] 462 36.80715 2073.96256 994352.8 -1 [12,] 463 36.80718 1859.15150 992257.1 1 [13,] 464 36.80721 1571.20472 993817.3 -1 [14,] 466 36.80726 1214.99714 993503.5 -1 [15,] 538 36.80921 1175.23706 994106.8 -1 [16,] 539 36.80924 1397.24256 992916.5 1 [17,] 540 36.80926 1694.66359 994677.7 -1 [18,] 542 36.80932 2128.28339 995114.6 -1 [19,] 768 36.81547 2233.84448 997356.6 -1 [20,] 769 36.81549 2018.98489 995103.9 1 [21,] 770 36.81552 1706.04721 996796.7 -1 [22,] 772 36.81558 1258.54310 996399.5 -1 [23,] 846 36.81759 1643.47577 997351.9 -1 [24,] 848 36.81764 2037.64174 997743.4 -1 [25,] 1108 36.82470 2183.35921 999030.3 -1 [26,] 1228 36.82799 2071.46113 999548.8 -1 [27,] 1229 36.82802 1695.10767 997456.7 1 [28,] 1230 36.82804 1312.93901 998793.4 -1 [29,] 1378 36.83206 1517.35722 999334.0 -1 [30,] 1379 36.83209 1376.77167 997784.2 1 [31,] 1380 36.83212 2074.75611 999979.2 -1 [32,] 1381 36.83214 4251.14171 997775.0 1 [33,] 1382 36.83217 5418.67371 1003081.5 -1 [34,] 1383 36.83220 3885.01003 997820.4 1 [35,] 1384 36.83223 1584.21412 999391.8 -1 [36,] 1386 36.83228 1502.95481 999278.2 -1 [37,] 1387 36.83231 1845.45572 997741.3 1 [38,] 1388 36.83233 2300.25825 1000105.1 -1 [39,] 1389 36.83236 3104.77709 997749.5 1 [40,] 1390 36.83239 3464.73840 1001317.1 -1 [41,] 1391 36.83241 2765.96283 997821.4 1 [42,] 1392 36.83244 1481.24717 999191.3 -1 [43,] 1393 36.83247 234.17743 997743.6 1 [44,] 1394 36.83250 -600.78230 997138.7 -1 [45,] 1395 36.83253 -483.80686 997744.0 1 [46,] 1396 36.83256 29.69062 997818.5 -1 [47,] 1397 36.83258 512.45094 997745.1 1 [48,] 1398 36.83261 925.51742 998716.9 -1 [49,] 1399 36.83264 1262.86637 997745.8 1 [50,] 1400 36.83266 1519.37309 999298.9 -1 [51,] 1402 36.83272 1828.95031 999602.8 -1 [52,] 1904 36.84685 2065.52015 997526.5 -1 [53,] 1905 36.84687 2415.85081 995387.2 1 [54,] 1906 36.84690 2836.20151 998248.2 -1 [55,] 1907 36.84693 3255.39567 995315.5 1 [56,] 1908 36.84696 3604.54648 998954.5 -1 [57,] 1932 36.84763 4076.19242 998862.9 -1 [58,] 1933 36.84765 3886.87533 994734.4 1 [59,] 1934 36.84768 3604.85823 998345.9 -1 [60,] 1935 36.84771 3328.24764 994690.8 1 [61,] 1936 36.84774 3037.27932 997726.0 -1 [62,] 2020 36.85005 2419.22925 995883.7 -1 [63,] 2021 36.85007 2691.43306 993400.4 1 [64,] 2022 36.85010 2941.00044 996385.2 -1 [65,] 2036 36.85047 2498.62662 995622.2 -1 [66,] 2040 36.85058 2080.43068 995181.9 -1 [67,] 2041 36.85061 1766.47235 993059.5 1 [68,] 2042 36.85063 1457.29035 994483.1 -1 [69,] 2114 36.85259 1236.76909 993268.6 -1 [70,] 2115 36.85261 1496.47128 992008.1 1 [71,] 2116 36.85264 1822.40679 993854.9 -1 [72,] 2174 36.85422 2123.69860 993264.7 -1 [73,] 2175 36.85425 2521.79108 991082.8 1 [74,] 2176 36.85428 2894.60034 994116.8 -1 [75,] 2178 36.85433 2701.61196 993638.6 -1 [76,] 2179 36.85436 1999.42285 991001.5 1 [77,] 2180 36.85439 1282.00750 992259.6 -1 [78,] 2182 36.85444 946.11885 991891.5 -1 [79,] 2183 36.85447 1286.43127 990902.3 1 [80,] 2184 36.85450 1879.84918 992837.6 -1 [81,] 2185 36.85452 2620.29563 990879.6 1 [82,] 2186 36.85455 3034.03651 993944.5 -1 [83,] 2187 36.85458 2755.72241 990853.3 1 [84,] 2188 36.85460 1980.64987 992797.1 -1 [85,] 2189 36.85463 1114.96341 990832.3 1 [86,] 2190 36.85466 481.45056 991274.8 -1 [87,] 3342 36.88622 1477.51547 969185.0 -1 [88,] 3418 36.88828 1101.59684 967412.1 -1 [89,] 3419 36.88831 1467.05417 966304.7 1 [90,] 3420 36.88833 1847.40969 968134.3 -1 [91,] 4880 36.92800 1437.69375 970563.3 -1 [92,] 4886 36.92816 1965.28321 971043.2 -1 [93,] 4960 36.93017 1964.23454 970249.4 -1 [94,] 4961 36.93019 1640.36283 968293.0 1 [95,] 4962 36.93022 1266.70328 969510.1 -1 [96,] 5118 36.93446 1209.94890 968516.4 -1 [97,] 5119 36.93448 573.48913 967340.1 1 [98,] 5120 36.93451 227.55074 967552.8 -1 [99,] 5121 36.93454 726.67957 967333.3 1 [100,] 5122 36.93456 1530.45451 968910.8 -1 [101,] 5123 36.93459 2014.28868 967367.9 1 [102,] 5124 36.93462 2101.63866 969435.2 -1 [103,] 6344 36.96791 1443.14004 984329.9 -1 [104,] 6350 36.96807 1143.43401 984039.3 -1 [105,] 6426 36.97012 1199.10220 983938.5 -1 [106,] 6427 36.97015 1569.30515 982705.1 1 [107,] 6428 36.97017 1924.09320 984635.8 -1 [108,] 7634 37.00294 1504.09330 1000015.9 -1 [109,] 7640 37.00311 1966.41511 1000559.0 -1 [110,] 7714 37.00513 1966.86676 1001471.0 -1 [111,] 7715 37.00516 1576.06331 999458.9 1 [112,] 7716 37.00518 1203.22288 1000678.0 -1 [113,] 8978 37.03977 1261.08200 1012158.7 -1 [114,] 9058 37.04193 1110.91893 1014517.3 -1 [115,] 9059 37.04196 1565.57897 1013383.5 1 [116,] 9060 37.04199 1898.59456 1015380.5 -1 [117,] 9136 37.04406 1492.12104 1017144.5 -1 [118,] 9210 37.04605 1435.36253 1019087.5 -1 [119,] 9211 37.04607 1706.37796 1017602.3 1 [120,] 9212 37.04610 1918.91617 1019589.7 -1 [121,] 9214 37.04617 1934.65727 1019620.6 -1 [122,] 9215 37.04619 2529.67186 1017675.9 1 [123,] 9216 37.04622 2853.69704 1020802.7 -1 [124,] 9217 37.04625 2236.51543 1017762.0 1 [125,] 9218 37.04627 1003.07778 1018645.6 -1 [126,] 9219 37.04630 -116.18689 1017814.8 1 [127,] 9220 37.04633 -730.41166 1017079.0 -1 [128,] 9221 37.04635 -538.24472 1017848.1 1 [129,] 9222 37.04638 449.34296 1018428.6 -1 [130,] 9223 37.04641 1894.98288 1017932.6 1 [131,] 9224 37.04644 3050.41833 1021196.3 -1 [132,] 9226 37.04649 2636.55277 1020734.5 -1 [133,] 9227 37.04652 1584.13726 1018087.6 1 [134,] 9228 37.04655 625.91043 1018723.0 -1 [135,] 10064 37.06938 1393.12551 1029063.7 -1 [136,] 10142 37.07148 1034.32612 1028860.3 -1 [137,] 10143 37.07151 1339.70430 1027782.1 1 [138,] 10144 37.07153 1691.80159 1029590.5 -1 [139,] 10292 37.07552 1913.75193 1031193.5 -1 [140,] 10293 37.07554 3642.26943 1029226.3 1 [141,] 10294 37.07557 4698.25038 1034268.1 -1 [142,] 10295 37.07559 3289.72814 1029351.6 1 [143,] 10296 37.07562 856.99624 1030195.1 -1 [144,] 10297 37.07565 -531.36213 1029334.1 1 [145,] 10298 37.07567 -711.51038 1028572.9 -1 [146,] 10299 37.07570 18.41848 1029344.0 1 [147,] 10300 37.07574 1582.21950 1031165.5 -1 [148,] 10301 37.07576 2681.50006 1029459.4 1 [149,] 10302 37.07579 3131.68170 1032769.2 -1 [150,] 10303 37.07582 2664.53779 1029521.0 1 [151,] 10304 37.07585 1835.54107 1031399.0 -1 [152,] 10305 37.07587 1312.97730 1029542.3 1 [153,] 10306 37.07590 1077.73554 1030685.3 -1 [154,] 11376 37.10491 1377.31129 1035745.2 -1 [155,] 11382 37.10507 1810.07457 1036196.2 -1 [156,] 11458 37.10716 1790.88405 1036088.2 -1 [157,] 11459 37.10719 1432.58543 1034235.5 1 [158,] 11460 37.10722 1097.17301 1035384.9 -1 [159,] 11540 37.10939 417.66643 1035004.4 -1 [160,] 11541 37.10943 1258.99426 1034562.2 1 [161,] 11542 37.10945 2002.34522 1036725.2 -1 [162,] 12796 37.14379 1375.95026 1043610.8 -1 [163,] 12802 37.14395 1081.64044 1043294.2 -1 [164,] 12876 37.14597 1017.82796 1043331.1 -1 [165,] 12877 37.14600 1369.93077 1042258.8 1 [166,] 12878 37.14603 1737.81627 1044121.4 -1 [167,] 12954 37.14810 1459.08937 1044284.2 -1 [168,] 13030 37.15017 1736.42887 1045535.1 -1 [169,] 14128 37.18024 1465.33709 1059212.0 -1 [170,] 14134 37.18040 1922.88105 1059737.9 -1 [171,] 14208 37.18241 1762.77418 1059869.2 -1 [172,] 14209 37.18244 1423.38233 1057999.3 1 [173,] 14210 37.18246 1109.19396 1059166.9 -1 [174,] 15344 37.21348 1271.65670 1065859.4 -1 [175,] 15345 37.21351 1478.16046 1064587.0 1 [176,] 15346 37.21354 1545.95649 1066489.7 -1 [177,] 15347 37.21356 1409.84915 1065028.0 1 [178,] 15426 37.21572 1685.66714 1067310.9 -1 [179,] 15432 37.21589 1914.93301 1067593.0 -1 [180,] 15433 37.21592 2245.23282 1065513.4 1 [181,] 15434 37.21594 2542.02049 1068271.9 -1 [182,] 15435 37.21597 2839.29992 1065525.6 1 [183,] 15436 37.21600 3012.87338 1068804.1 -1 [184,] 15874 37.22793 2053.84812 1079082.8 -1 [185,] 15875 37.22796 1722.75060 1076883.7 1 [186,] 15876 37.22798 1337.03238 1078366.8 -1 [187,] 15950 37.23000 1128.53906 1080448.2 -1 [188,] 15951 37.23003 1350.45577 1079247.6 1 [189,] 15952 37.23006 1631.05108 1081104.6 -1 [190,] 15954 37.23011 1965.32962 1081500.5 -1 [191,] 16028 37.23213 1699.12018 1083059.0 -1 [192,] 16104 37.23419 1772.36208 1084645.6 -1 [193,] 16171 37.23600 1002.31329 1083912.8 1 [194,] 16172 37.23603 2027.32521 1086129.4 -1 [195,] 16173 37.23606 6546.45867 1083930.1 1 [196,] 16174 37.23609 2038.77233 1086188.6 -1 [197,] 16175 37.23612 -12274.47025 1083969.6 1 [198,] 16176 37.23614 2997.82676 1087424.4 -1 [199,] 16177 37.23617 78916.50017 1084413.8 1 [200,] 16178 37.23620 128878.18847 1246449.2 -1 [201,] 16179 37.23622 162231.38829 1086447.2 1 [202,] 16180 37.23625 127269.16908 1246397.1 -1 [203,] 16181 37.23628 140406.92082 1087652.5 1 [204,] 16182 37.23631 127619.40965 1246330.4 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 1381 36.83214 6.809400e+02 [2,] 1382 36.83217 6.221920e+02 [3,] 1930 36.84757 1.300597e+12 [4,] 2177 36.85431 5.991990e+02 [5,] 9216 37.04622 4.857190e+02 [6,] 9217 37.04625 6.052630e+02 [7,] 9218 37.04627 4.954070e+02 [8,] 9521 37.05456 1.102388e+04 [9,] 10294 37.07557 5.716060e+02 [10,] 10295 37.07559 5.050820e+02 [11,] 12287 37.12987 1.395740e+03 [12,] 16177 37.23617 4.201620e+02 [13,] 16178 37.23620 3.967260e+02 [14,] 16179 37.23622 3.922080e+02 [15,] 16180 37.23625 3.878840e+02 [16,] 16181 37.23628 4.194930e+02 [17,] 16182 37.23631 5.631600e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 167.501 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 86.379 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 87.375 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -13.228 PER MEG" [1] "Screened 6 O2 and CO2 values when pdsp not controlling" [1] 385.3576 419.9288 393.4148 398.9753 398.3147 [1] -508.1637 -735.0052 -585.3558 -749.7229 -788.6734 [1] "Nominal linear calibrations:" [1] "co2scl = 0.973 co2off = -11.75 o2scla = -0.048 o2offa = -35.4" [1] "(dV/V)/(dXO2/XO2) = -4.365" [1] "(dV/V)/d(O2/N2) = -3.451" [1] "Finding cal and sample periods" [1] "Median Cal: 2.93 minutes" [1] "Average Cal: 2.85 minutes" [1] "Shortest Cal: 0.23 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 4 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 21" [1] "at: 38" [1] "at: 58" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-1HZ_DC8_20170205_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 556470 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-20Hz_DC8_20170205_R0.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 16093012 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00513" [1] "HS CO2 vs. PACAB: m = -0.00379, r^2 = 0.45" [1] "LS CO2 vs. PACAB: m = -0.00648, r^2 = 0.7" [1] "HS+LS LIH2O vs. PACAB: m = -0.000232" [1] "HS LIH2O vs. PACAB: m = -0.000218, r^2 = 0.89" [1] "LS LIH2O vs. PACAB: m = -0.000246, r^2 = 0.95" [1] "HS+LS CO2 vs. LIH2O: m = 24.1" [1] "HS CO2 vs. LIH2O: m = 18.9, r^2 = 0.6" [1] "LS CO2 vs. LIH2O: m = 29.4, r^2 = 0.88" [1] "APCO2 vs. PACAB: m = 0.00255, r^2 = 0" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.425" [1] "HS O2 vs. PACAB: m = 0.34, r^2 = 0.49" [1] "LS O2 vs. PACAB: m = 0.51, r^2 = 0.75" [1] "HS+LS O2 vs. LIH2O: m = -1980" [1] "HS O2 vs. LIH2O: m = -1770, r^2 = 0.75" [1] "LS O2 vs. LIH2O: m = -2190, r^2 = 0.93" [1] "HS+LS O2 vs. PAO2: m = -63.2" [1] "HS O2 vs. PAO2: m = -64.9, r^2 = 0.9" [1] "LS O2 vs. PAO2: m = -61.4, r^2 = 0.9" [1] "HS+LS O2 vs. TPBOX: m = 14.1" [1] "HS O2 vs. TPBOX: m = 12.7, r^2 = 0.84" [1] "LS O2 vs. TPBOX: m = 15.5, r^2 = 0.92" [1] "APO vs. PACAB: m = -0.0451, r^2 = 0" [1] "APO vs. PAO2: m = -62.3, r^2 = 0.71" [1] "APO vs. TPBOX: m = 19.1, r^2 = 0.62" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.0774, r^2 = 0" [1] "LS CO2 vs. LiCor Cell P: m = -0.264, r^2 = 0.04" [1] "HS CO2 vs. CO2 Vol P: m = 0.593, r^2 = 0.54" [1] "LS CO2 vs. CO2 Vol P: m = 0.773, r^2 = 0.76" [1] "HS CO2 vs. SLOPE: m = 0.903, r^2 = 0.14" [1] "LS CO2 vs. SLOPE: m = -0.666, r^2 = 0.12" [1] "HS O2 vs. O2 Vol P: m = -58, r^2 = 0.79" [1] "LS O2 vs. O2 Vol P: m = -60.3, r^2 = 0.85" [1] "HS O2 vs. O2 Cell T: m = 27.2, r^2 = 0.53" [1] "LS O2 vs. O2 Cell T: m = 30, r^2 = 0.62" [1] "HS O2 vs. CO2 Vol P: m = -54.6, r^2 = 0.79" [1] "LS O2 vs. CO2 Vol P: m = -56.2, r^2 = 0.8" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -30.4, r^2 = 0.18" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -1.35, r^2 = 0.2" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -54.6, r^2 = 0.79" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -56.2, r^2 = 0.8" [1] "HS O2 vs. LIH2O: m = -1800, r^2 = 0.75" [1] "LS O2 vs. LIH2O: m = -2140, r^2 = 0.91" [1] "HS O2 vs. SLOPE: m = 1.11, r^2 = 0.07" [1] "LS O2 vs. SLOPE: m = 1.14, r^2 = 0.01" [1] "HS CO2 vs. Time: m = 20.741, r^2 = 0.9" [1] "LS CO2 vs. Time: m = 21.773, r^2 = 0.89" [1] "HS CO2 vs. Cylinder T: m = 1.077, r^2 = 0.25" [1] "LS CO2 vs. Cylinder T: m = 1.499, r^2 = 0.426" [1] "HS CO2 vs. Regulator T: m = -0.381, r^2 = 0.26" [1] "LS CO2 vs. Regulator T: m = -0.662, r^2 = 0.678" [1] "HS CO2 vs. Ref. Volumes T: m = -0.016, r^2 = 0" [1] "LS CO2 vs. Ref. Volumes T: m = -0.417, r^2 = 0.132" [1] "HS CO2 vs. Manifold T: m = -0.217, r^2 = 0.34" [1] "LS CO2 vs. Manifold T: m = -0.35, r^2 = 0.815" [1] "HS CO2 vs. Pump Box T: m = -0.114, r^2 = 0.38" [1] "LS CO2 vs. Pump Box T: m = -0.215, r^2 = 0.838" [1] "HS O2 vs. Cylinder T: m = -115.268, r^2 = 0.5" [1] "LS O2 vs. Cylinder T: m = -114.209, r^2 = 0.492" [1] "HS O2 vs. Regulator T: m = 43.894, r^2 = 0.6" [1] "LS O2 vs. Regulator T: m = 48.706, r^2 = 0.73" [1] "HS O2 vs. Ref. Volumes T: m = 19.712, r^2 = 0.07" [1] "LS O2 vs. Ref. Volumes T: m = 32.125, r^2 = 0.157" [1] "HS O2 vs. Manifold T: m = 25.358, r^2 = 0.81" [1] "LS O2 vs. Manifold T: m = 25.587, r^2 = 0.866" [1] "HS O2 vs. Pump Box T: m = 12.689, r^2 = 0.82" [1] "LS O2 vs. Pump Box T: m = 15.845, r^2 = 0.905" [1] "HS CO2 vs. WT P: m = -0.003, r^2 = 0.26" [1] "LS CO2 vs. WT P: m = -0.006, r^2 = 0.558" [1] "HS CO2 vs. SP P: m = -0.00355, r^2 = 0.43" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.006, r^2 = 0.37" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.002, r^2 = 0.37" [1] "LS CO2 vs. SP P: m = -0.00678, r^2 = 0.76" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.018, r^2 = 0.82" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.011, r^2 = 0.82" [1] "HS CO2 vs. WT FL: m = -0.143, r^2 = 0.42" [1] "LS CO2 vs. WT FL: m = -0.212, r^2 = 0.833" [1] "HS CO2 vs. SP FL: m = 0.064, r^2 = 0.09" [1] "LS CO2 vs. SP FL: m = 0.093, r^2 = 0.095" [1] "HS O2 vs. SLPDIFF: m = -4.752, r^2 = 0.39" [1] "LS O2 vs. SLPDIFF: m = -2.908, r^2 = 0.171" [1] "HS O2 vs. WT P: m = 0.279, r^2 = 0.38" [1] "LS O2 vs. WT P: m = 0.391, r^2 = 0.518" [1] "HS O2 vs. SP P: m = 0.309, r^2 = 0.43" [1] "LS O2 vs. SP P: m = 0.454, r^2 = 0.591" [1] "HS O2 vs. WT FL: m = 15.074, r^2 = 0.81" [1] "LS O2 vs. WT FL: m = 15.513, r^2 = 0.89" [1] "HS O2 vs. SP FL: m = -3.863, r^2 = 0.06" [1] "LS O2 vs. SP FL: m = -5.291, r^2 = 0.06" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 42.55, 23.98" [1] "Empirical LP O2 lag flow(s): 107.7, 91.3" [1] "Empirical LP CO2 lag time(s): 23.19, 16.46" [1] "Empirical LP CO2 lag flow(s): 107.7, 91.3" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.86" [1] "Median all HS CO2 SD = 0.8" [1] "Median all LS CO2 SD = 0.88" [1] "Median all LT CO2 SD = 0.84" [1] "Median all WT CO2 SD = 0.85" [1] "Median all HS or LS CO2 SD = 0.85" [1] "Median all cal O2 SD = 3.01" [1] "Median all HS O2 SD = 2.9" [1] "Median all LS O2 SD = 2.95" [1] "Median all LT O2 SD = 2.74" [1] "Median all WT O2 SD = 3.07" [1] "Median all HS or LS O2 SD = 2.94" [1] "Median all cal CO2 Slope = 0.03" [1] "Median all HS CO2 Slope = 0.04" [1] "Median all LS CO2 Slope = 0.11" [1] "Median all LT CO2 Slope = 0.02" [1] "Median all WT CO2 Slope = -0.03" [1] "Median all HS or LS CO2 Slope = 0.06" [1] "Median all cal O2 Slope = -0.24" [1] "Median all HS O2 Slope = -0.1" [1] "Median all LS O2 Slope = -0.26" [1] "Median all LT O2 Slope = -0.11" [1] "Median all WT O2 Slope = -0.83" [1] "Median all HS or LS O2 Slope = -0.24" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 20.43 per meg" [1] "Initial O2 Calibration Offset = -30.41 per meg" [1] "SD of O2 Calibration (post-takeoff) = 9.39 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -33.7 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -49.17 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 68651.28 106817.01" [1] "Time lag adjustments = 2 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 41.6 at 98 sccm" [1] "Median O2 delay + tlagff = 42.3 at 98 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 40.5 at 98 sccm" [1] "Median O2 delay from 3-way + tlagff = 41.3 at 98 sccm" [1] "after calc and ff lag: 68599.8 106775.87" [1] "2025-05-13 15:36:20 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] -24.66947136 -25.90489630 -25.47686875 -25.74520812 -25.74520812 [6] -8.40739241 -11.10739822 -18.67173061 -24.89922131 -24.51884465 [11] -18.90616078 -18.24593043 -18.45907230 -21.30545975 -17.88495834 [16] -0.36877109 -0.55372840 -1.10296024 -1.10296024 -21.32794727 [21] -21.20384954 -20.73082951 -20.70516878 1.08236288 1.08236288 [26] 6.75407827 9.77865229 -3.15060416 -7.75119075 -7.75119075 [31] -7.75119075 -12.35131225 -16.66906239 -18.81586858 -19.37455778 [36] -9.35479344 3.95647497 1.68080693 0.88516914 0.88516914 [41] -7.45110949 -6.42055464 -6.30629665 -6.30629665 -1.03019476 [46] 0.62742438 3.00152616 3.87945309 -9.66534128 -9.66534128 [51] -9.66534128 -9.66534128 -0.58561240 7.20752354 7.20752354 [56] 7.20752354 7.20752354 -3.72476431 -7.37481766 -7.37481766 [61] -7.37481766 -14.03750876 -15.80305910 -16.08578385 -16.08578385 [66] -10.10863212 -7.65516114 -7.65516114 -7.65516114 1.44367231 [71] 1.44367231 1.44367231 -0.11355441 -4.69784547 -8.92534353 [76] -8.92534353 -8.92534353 -8.92534353 -14.28112070 -12.48867736 [81] -12.48867736 -12.48867736 -13.19194506 -13.19194506 -12.97992750 [86] -12.81249466 6.88791938 6.88791938 6.88791938 2.78428386 [91] 8.64382747 8.64382747 8.64382747 8.84595591 -13.16843373 [96] -20.92932490 -20.92932490 -20.92932490 -24.61230283 -14.51889440 [101] -14.51889440 -14.51889440 -13.57916036 -5.70985367 -5.70985367 [106] -5.70985367 -5.07088911 5.13340936 6.22266956 6.22266956 [111] 6.22266956 -11.52092594 -12.41260079 -12.77761038 -12.77761038 [116] -11.37516238 -10.26750456 -10.88048007 -10.88048007 -10.88048007 [121] 2.24339983 4.31929529 5.34003242 5.34003242 -14.19335942 [126] -14.19335942 -14.52831550 -15.16206608 1.17346245 5.29318972 [131] 5.29318972 5.29318972 -6.05748128 -13.90900093 -13.90900093 [136] -13.90900093 -4.38228047 4.15327658 4.15327658 3.40215665 [141] 2.62614013 -11.82564994 -12.57877033 -12.95267154 -12.95267154 [146] -7.08481868 -7.08481868 -7.08481868 -7.08481868 -11.48370830 [151] -11.48370830 -11.48370830 -11.14758880 -8.68480841 -6.76411084 [156] -6.45346242 -6.42313327 -6.39271186 -5.57166465 -5.56721242 [161] -5.56721242 -5.56721242 -3.64059064 -2.75397180 -1.82392697 [166] -1.15365345 8.97070640 8.97070640 8.97070640 8.97070640 [171] -9.43459457 -10.39059850 -8.78289955 -6.68371528 -12.51950476 [176] -22.27971051 -22.27971051 -22.65091859 -24.08037791 -3.05946119 [181] -3.05946119 -3.05946119 -1.97746263 -4.34096245 -4.31137690 [186] -4.29978315 -4.29978315 -0.34231488 -1.09829499 -2.15052685 [191] -5.08999811 -4.83048886 -4.79497317 -4.79497317 -4.79497317 [196] -5.21955750 -9.16335873 -10.22286330 -10.22286330 -10.22286330 [201] -15.18019952 -12.80077189 -12.80077189 -12.80077189 -13.22410506 [206] -13.23193249 -13.24634989 -13.25341532 -11.82180051 -11.82180051 [211] -11.82180051 -11.64291334 -7.53365765 -7.53365765 -7.53365765 [216] -7.53365765 -7.01167883 -4.18963607 -0.83659728 -0.28876869 [221] -0.26090515 -3.27139529 -3.25678977 -3.25395300 -3.25395300 [226] 2.55399576 2.55399576 2.55399576 2.55399576 -1.84512897 [231] -2.40830163 -2.48973572 -4.98135169 -3.57578835 -4.38460706 [236] -4.38460706 -4.38460706 -0.86678500 -3.39867900 -5.07345243 [241] -5.07345243 7.06983050 7.06983050 8.81639302 10.98621679 [246] -22.85370726 -23.51963337 -23.51963337 -20.08964320 -12.58226620 [251] 0.46024979 0.46024979 0.38969326 -0.07491032 25.54672178 [256] 23.46012565 23.46012565 23.46012565 4.76025336 4.76025336 [261] 4.76025336 4.76025336 -5.69790853 -5.69790853 -5.69790853 [266] -5.21459287 -4.21932817 -3.44667266 -3.44667266 -3.44667266 [271] -2.01424620 5.37061654 5.86397941 6.19977744 6.26701476 [276] -3.62410367 -3.62410367 -3.66306342 -11.42968601 -8.48152049 [281] -8.48152049 -8.48152049 -8.48152049 -13.88594312 -18.09229683 [286] -18.67483013 -18.67483013 -15.31197382 -13.51709859 -13.51709859 [291] -13.51709859 -13.14852226 -10.25577380 -7.93403825 -5.84931860 [296] -4.88121458 -7.53817311 -7.53817311 -7.53817311 -7.53817311 [301] -1.13663415 -1.13663415 -1.13663415 -1.13663415 -0.16992002 [306] 1.05629047 1.05629047 1.05629047 -0.36642314 -7.28405950 [311] -9.34729556 -11.21942891 -11.21942891 -18.94138143 -18.94138143 [316] -18.94138143 -11.03210874 6.44963680 6.44963680 6.44963680 [321] 6.44963680 5.56068846 2.78387544 1.33946386 1.33946386 [326] 0.03316161 -1.58903791 -0.53719242 0.89099923 1.99079736 [331] 0.90500974 0.90500974 0.90500974 0.74416336 9.74898342 [336] 8.15644761 6.54235146 5.50421485 -11.97353956 -11.97353956 [341] -11.97353956 -11.97353956 -5.06837576 -4.51923872 -4.51923872 [346] -4.51923872 -4.42126417 -5.23551880 -7.24815796 -7.24815796 [351] -7.24815796 -16.25058467 -16.25058467 -16.25058467 -16.25058467 [356] -12.62296229 -13.25482354 -13.61800443 -13.66715318 -15.61281224 [361] -15.85600351 -15.85600351 -15.85600351 -18.98454451 -20.20153191 [366] -20.26694828 -20.30662564 -16.10489391 -15.65494140 -15.70448604 [371] -15.86800826 -15.16284417 -13.32432135 -13.35160866 -13.35160866 [376] -13.35160866 -18.42318203 -18.42318203 -18.42318203 -19.71209403 [381] -27.52566394 -29.58980221 -29.58980221 -29.58980221 -36.59738774 [386] -39.51756190 -39.51756190 -39.51756190 -20.84262425 -4.93492234 [391] -4.06941364 -3.86785483 -3.78342820 -6.73131701 -6.73131701 [396] -6.73131701 -6.08988104 -9.01880860 -7.28644356 -5.59503579 [401] -5.48824839 -10.07708216 -10.07708216 -10.07708216 -9.80809166 [406] -3.22352606 2.07734285 2.33924110 2.54423846 2.84292719 [411] 3.74503534 4.01217142 4.24699021 4.50132395 5.86602180 [416] 6.37651634 6.72105103 6.72105103 0.66895648 0.66895648 [421] 0.66895648 0.66895648 0.54192886 0.54192886 0.54192886 [426] 0.54192886 1.88752039 -2.62002392 -9.43815718 -9.43815718 [431] -9.43815718 -14.74577772 -14.74577772 -14.56614700 -12.35056566 [436] -8.31225066 -7.55062318 -6.97296032 -6.97296032 0.08176162 [441] 0.08176162 0.08176162 0.08176162 -10.83982630 -13.31237607 [446] -13.54545973 -13.70853438 -15.02293698 -15.77355427 -16.91216668 [451] -18.29707761 -18.33768287 -15.66331356 -15.66331356 -15.66331356 [456] -15.66331356 -7.00430112 -7.00430112 -7.00430112 -7.00430112 [461] -14.77861116 -17.08433593 -15.81117717 -14.74601878 -15.65593035 [466] -18.71347833 -18.71347833 -18.71347833 -18.60357996 -15.30422073 [471] -15.30422073 -15.30422073 -15.30422073 -8.89031377 -9.09409366 [476] -9.24215674 -9.24215674 -5.39099295 -4.84814787 -4.84814787 [481] -4.84814787 -4.81789696 -5.09414666 -5.72132187 -5.83051529 [486] -5.91578011 -16.55737772 -16.55737772 -16.55737772 -16.55737772 [491] -14.52724823 -14.52724823 [1] 63.27856 66.04089 68.40223 71.19781 73.70902 76.90402 79.41521 [8] 83.08983 86.86072 89.74850 92.13193 95.10436 97.64411 99.92614 [15] 101.85276 104.27886 106.20596 107.97195 109.68761 111.53741 113.48197 [22] 115.26717 117.19078 118.96441 120.75782 123.11102 124.67129 125.95056 [29] 127.56138 129.01405 130.27217 131.74276 133.42478 135.96539 138.06019 [36] 140.42805 143.02290 145.38749 147.91163 150.66674 153.26444 155.97514 [43] 158.49867 160.78459 163.10036 165.09366 166.92756 168.71263 170.38142 [50] 171.84909 173.44918 174.78053 176.43217 178.06671 179.79446 181.63260 [57] 183.19782 185.54887 187.63340 190.12910 192.48134 194.85943 197.34823 [64] 200.08017 202.76211 205.64359 208.46480 211.28214 213.99745 216.83150 [71] 219.50030 221.93268 224.34940 226.52263 228.47027 230.29846 232.20758 [78] 233.85334 235.33103 236.78190 238.10367 239.53288 240.95982 242.33049 [85] 244.57324 246.25421 248.15196 250.09072 251.93101 254.04015 256.03721 [92] 258.11816 260.26626 262.52446 264.84340 267.00204 269.16179 271.25592 [99] 273.67654 275.90235 278.05310 279.90976 282.33788 284.31024 286.28917 [106] 288.10600 289.80636 291.48267 293.12602 294.71867 296.75211 298.31762 [113] 300.05344 301.67568 303.49583 305.28832 307.10881 308.99135 311.04244 [120] 312.64662 314.79785 316.72425 318.65213 320.55124 322.02485 323.80691 [127] 325.05757 325.99231 326.55038 327.27245 327.79143 328.56681 329.31916 [134] 330.13578 330.77740 331.33613 331.88494 332.37267 332.85354 333.35484 [141] 333.85203 334.42946 334.91197 335.44268 336.05465 336.81391 337.46894 [148] 338.14579 338.72500 339.39438 339.95485 340.70756 341.24998 341.84976 [155] 342.39131 342.91559 343.42245 343.93085 344.52998 345.21146 346.24357 [162] 347.20104 348.39558 349.61714 350.83769 351.98247 353.05454 354.00137 [169] 355.05985 356.16995 357.27729 358.34757 359.46685 360.53379 362.16097 [176] 363.70301 365.35442 366.92128 368.60186 370.26149 371.75155 373.25214 [183] 374.54511 376.00515 377.15603 378.29672 379.55934 380.80888 381.93582 [190] 383.03323 384.10833 385.20521 386.42066 387.69997 389.11405 390.33913 [197] 392.07823 393.79792 395.49787 397.04142 398.87017 400.66779 402.21531 [204] 403.87791 405.50148 407.01934 408.68202 410.12700 411.62309 412.88994 [211] 414.29716 415.98050 417.29471 418.70530 420.03163 421.13623 422.33633 [218] 423.05868 423.98484 424.59348 425.17794 425.55941 425.86578 426.00687 [225] 426.18614 426.29529 426.38595 426.53626 426.84615 427.41844 428.29957 [232] 429.53967 431.47411 432.52591 433.74475 435.11696 436.54117 437.72754 [239] 438.98311 439.99064 441.45491 442.75194 444.07351 445.51305 447.01569 [246] 448.33803 449.95325 451.27153 452.98076 454.47186 455.79786 457.39081 [253] 458.54060 459.75958 460.75742 461.66048 462.42074 463.16676 463.72651 [260] 464.25250 464.68912 465.13777 465.54428 466.01416 466.50282 467.15082 [267] 467.77848 468.65369 469.59075 470.61114 471.65798 472.64033 474.11980 [274] 475.41408 476.71723 478.12377 479.53838 481.01675 482.39327 483.73472 [281] 484.91590 486.12867 487.16100 488.22680 489.15967 490.11892 490.89585 [288] 491.78256 492.43604 493.05520 493.67670 494.26999 494.78365 495.25220 [295] 495.67291 496.02293 496.39500 496.70149 497.09611 497.42675 497.78750 [302] 498.14186 498.54349 498.89315 499.25053 499.51746 500.11661 500.70406 [309] 501.46933 502.12813 503.07207 503.97319 505.02159 506.33459 507.43094 [316] 508.58108 509.71977 510.72588 511.97476 513.10883 514.17852 515.15555 [323] 516.16715 517.43023 518.62226 519.82857 521.00598 522.20653 523.43068 [330] 524.53607 525.55300 526.55952 527.37047 528.28538 529.06463 529.68645 [337] 530.31668 530.78600 531.23228 531.68274 532.09852 532.47645 532.89453 [344] 533.41777 533.99529 534.62956 535.27678 535.92281 536.55823 537.20903 [351] 537.89191 538.54871 539.17191 539.94736 540.66003 541.40524 542.11227 [358] 542.85687 543.59690 544.32616 544.91933 545.47079 546.09914 546.66399 [365] 547.04002 547.43769 547.66082 547.93273 548.17159 548.45021 548.94020 [372] 549.36723 549.94936 550.53623 551.17972 551.87231 552.51574 553.23564 [379] 553.90482 554.59566 555.29262 555.92537 556.65063 557.30232 557.90235 [386] 558.52440 559.19439 559.87958 560.66270 561.30978 561.88235 562.53942 [393] 563.07919 563.76807 564.40623 565.04501 565.83713 566.74122 567.62698 [400] 568.58907 569.45947 570.12145 570.82815 571.39229 571.84566 572.19191 [407] 572.44874 572.78045 573.04009 573.26097 573.40470 573.52829 573.63693 [414] 573.75460 573.94706 574.18324 574.40410 574.68191 574.93355 575.26503 [421] 575.66915 576.11269 576.60568 577.14067 577.58034 578.22351 578.91283 [428] 579.59340 580.28242 581.15744 581.92450 582.73461 583.50336 584.34580 [435] 585.07402 585.76525 586.46638 587.02071 587.52980 588.09885 588.53198 [442] 588.97472 589.38056 589.87727 590.25583 590.64908 590.92422 591.45531 [449] 591.90081 592.19063 592.54314 592.90682 593.26531 593.63972 594.10280 [456] 594.49082 594.90051 595.32697 595.81806 596.24177 596.60797 596.97794 [463] 597.31713 597.69203 598.05899 598.46039 598.73795 599.27985 599.64484 [470] 600.08997 600.39561 600.75122 601.47382 602.16832 602.72567 603.39612 [477] 604.02207 604.60664 605.18742 605.98434 606.62417 607.30453 607.94956 [484] 608.51076 609.11225 609.65000 610.20766 610.76023 611.21039 611.87799 [491] 612.42955 612.89550 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 28 O2 values from manual exclude period 36.854427 to 36.855193" [1] "Not reporting 28 APO values from manual exclude period 36.854427 to 36.855193" [1] "Not reporting 112 O2 values from manual exclude period 37.005404 to 37.00847" [1] "Not reporting 112 APO values from manual exclude period 37.005404 to 37.00847" [1] "Not reporting 56 O2 values from manual exclude period 37.045639 to 37.047172" [1] "Not reporting 56 APO values from manual exclude period 37.045639 to 37.047172" [1] "Not reporting 56 O2 values from manual exclude period 37.074762 to 37.076295" [1] "Not reporting 56 APO values from manual exclude period 37.074762 to 37.076295" [1] "Not reporting 183 O2 values from manual exclude period 37.134 to 37.139" [1] "Not reporting 183 APO values from manual exclude period 37.134 to 37.139" [1] "Not reporting 0 smoothed O2 values from manual exclude period 36.8539185957395 to 36.8546922608299" [1] "Not reporting 0 smoothed APO values from manual exclude period 36.8539185957395 to 36.8546922608299" [1] "Not reporting 267 smoothed O2 values from manual exclude period 37.0049247493098 to 37.0080134472232" [1] "Not reporting 267 smoothed APO values from manual exclude period 37.0049247493098 to 37.0080134472232" [1] "Not reporting 139 smoothed O2 values from manual exclude period 37.0450786664108 to 37.0466797180459" [1] "Not reporting 139 smoothed APO values from manual exclude period 37.0450786664108 to 37.0466797180459" [1] "Not reporting 136 smoothed O2 values from manual exclude period 37.0742194882208 to 37.0757903467536" [1] "Not reporting 136 smoothed APO values from manual exclude period 37.0742194882208 to 37.0757903467536" [1] "Not reporting 433 smoothed O2 values from manual exclude period 37.1335072494082 to 37.1385221755781" [1] "Not reporting 433 smoothed APO values from manual exclude period 37.1335072494082 to 37.1385221755781" [1] "Not reporting 0 smoothed O2 values from manual exclude period 36.8539185957395 to 36.8546922608299" [1] "Not reporting 0 smoothed APO values from manual exclude period 36.8539185957395 to 36.8546922608299" [1] "Not reporting 267 smoothed O2 values from manual exclude period 37.0049247493098 to 37.0080134472232" [1] "Not reporting 267 smoothed APO values from manual exclude period 37.0049247493098 to 37.0080134472232" [1] "Not reporting 139 smoothed O2 values from manual exclude period 37.0450786664108 to 37.0466797180459" [1] "Not reporting 139 smoothed APO values from manual exclude period 37.0450786664108 to 37.0466797180459" [1] "Not reporting 136 smoothed O2 values from manual exclude period 37.0742194882208 to 37.0757903467536" [1] "Not reporting 136 smoothed APO values from manual exclude period 37.0742194882208 to 37.0757903467536" [1] "Not reporting 433 smoothed O2 values from manual exclude period 37.1335072494082 to 37.1385221755781" [1] "Not reporting 433 smoothed APO values from manual exclude period 37.1335072494082 to 37.1385221755781" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170205_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 123660 items [1] 5 3092 30915 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] -382.3889 -387.0900 -364.9280 -347.1720 -349.8190 -364.4600 [1] 27487 [1] "Average Date / Time for slice RF05 = 2017-02-06 00:43:38.5470085144043" [1] "sum(lsel) = 2457" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -0.448 803.349 [1] -0.448 803.349 [1] 196.651 1000.448 [1] 0 999999 [1] "highestmid = 713.24" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF05 APO_AO2 range = -339.2,-284.03" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170205_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 123660 items [1] 5 3092 30915 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] -770.4522 -755.1640 -715.8090 -685.0810 -683.6090 -687.0920 [1] 27497 [1] "Average Date / Time for slice RF05 = 2017-02-06 00:43:38.5470085144043" [1] "sum(lsel) = 2457" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -0.448 803.349 [1] -0.448 803.349 [1] 196.651 1000.448 [1] 0 999999 [1] "highestmid = 713.24" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF05 O2_AO2 range = -618.48,-555.74" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1702/AO2_DC8_20170205_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 123660 items [1] 5 3092 30915 [1] "done reading AO2" [1] 2017 2017 2017 2017 2017 2017 [1] 26 26 26 26 26 26 [1] 61910 61920 61930 61940 61950 61960 [1] "2017-01-26 17:11:50 UTC" "2017-01-26 17:12:00 UTC" [3] "2017-01-26 17:12:10 UTC" "2017-01-26 17:12:20 UTC" [5] "2017-01-26 17:12:30 UTC" "2017-01-26 17:12:40 UTC" [1] 423.8729 420.0680 416.7962 414.3267 413.5424 411.4184 [1] 27705 [1] "Average Date / Time for slice RF05 = 2017-02-06 00:46:18.7141718864441" [1] "sum(lsel) = 2512" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -0.448 803.349 [1] -0.448 803.349 [1] 196.651 1000.448 [1] 0 999999 [1] "highestmid = 713.24" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM2 RF05 CO2_AO2 range = 399.83,406.25" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 66 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"