[1] "2025-05-13 15:16:33 MDT" options [1,] "file" "170111b" [2,] "flight" "TF01" [3,] "project" "ATOM2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "2" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "TRUE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "2" [66,] "mmsrev" "TRUE" [67,] "usespline" "4pt" [68,] "updnave" "170111b" [1] "Reading in flight and plotting intervals" Read 18 records [1] "Reading in /scr/raf/stephens/AO2DAT/170111b.mr" Read 7617 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.42 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.48 seconds" [1] "New JOGEST = 2.48 seconds" [1] "New VALVE SKIP = 24 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/170111b.hr" Read 30473 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 7617 30472 [1] "Converting hrdata statout" [1] "Tue May 13 03:16:33 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 3141 records Read 536 records Read 2575 records [1] "No O2 data for JJ8856 fill 2" [1] "No O2 data for JJ8578 fill 2" [1] "No O2 data for JJ8578 fill 3" [1] "No O2 data for JJ8578 fill 4" [1] "No O2 data for JJ651 fill 2" [1] "No O2 data for JJ651 fill 3" [1] "No O2 data for JJ651 fill 4" [1] "No O2 data for JJ651 fill 5" [1] "No O2 data for JJ22398 fill 3" [1] "No O2 data for JJ22398 fill 5" [1] "No O2 data for JA02405 fill 1" [1] "No O2 data for JA02405 fill 2" [1] "No O2 data for JA02405 fill 3" [1] "No O2 data for JA02405 fill 4" [1] "No O2 data for JA02385 fill 2" [1] "No O2 data for JA02385 fill 3" [1] "No O2 data for JA02385 fill 4" [1] "No O2 data for JA02379 fill 2" [1] "No O2 data for JA02379 fill 3" [1] "No O2 data for JA02379 fill 4" [1] "No O2 data for JA02379 fill 5" [1] "No O2 data for JA02377 fill 2" [1] "No O2 data for JA02377 fill 3" [1] "No O2 data for JA02377 fill 4" [1] "No O2 data for JA02347 fill 1" [1] "No O2 data for JA02347 fill 3" [1] "No O2 data for JA02347 fill 4" [1] "No O2 data for JA02347 fill 5" [1] "No O2 data for FA02361 fill 4" [1] "No O2 data for FA02360 fill 3" [1] "No O2 data for CC328855 fill 1" [1] "No O2 data for CC328855 fill 2" Read 536 records [1] "position 1 cylinder OK30771 description: HS CO2 = 391.28 O2 = -449.7" [1] "position 2 cylinder OK30764 description: LS CO2 = 404.06 O2 = -711.5" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.42 O2 = -586.8" [1] "position 4 cylinder OK30769 description: WT CO2 = 398.34 O2 = -769.8" [1] "position 5 cylinder OK30770 description: LP CO2 = 398.3 O2 = -787.9" [1] 391.2824 404.0600 393.4162 398.3380 398.2994 [1] -449.7074 -711.5200 -586.7901 -769.7950 -787.8880 [1] "Nominal linear calibrations:" [1] "co2scl = 1.054 co2off = -2.75 o2scla = -0.051 o2offa = -23.1" [1] "(dV/V)/(dXO2/XO2) = -4.116" [1] "(dV/V)/d(O2/N2) = -3.254" [1] "Reading in very high resolution timeseries" Read 152340 records [1] 152340 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 03:16:37 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 03:16:38 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.254" [1] "o2scaleavenew_drelVdrelP = -4.116" [1] "median(o2scalenew) = -3.244" [1] "Empirical dV/V vs dP/P relationship =-2.58, r^2 =0.026, damping =0.627" [1] "Tue May 13 03:16:38 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 03:16:54 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 519184.81008 SECONDS" [1] "Tue May 13 03:16:54 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 4 medium-rate record(s) with accumulation errors" [1] "Screening 30 MR O2 values when lamp off" [1] "Screening 652 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -215263.095 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -215274.667 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -215276.955 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 15.713 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 53 [1] 116 [1] 146 [1] 146 [1] 151 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 81 11.92113 2226.2085 1035707.7 -1 [2,] 82 11.92116 1966.9432 1033411.6 1 [3,] 83 11.92118 1600.5040 1035031.1 -1 [4,] 85 11.92124 1170.0292 1034648.0 -1 [5,] 157 11.92321 1106.5172 1034841.5 -1 [6,] 158 11.92324 1320.4198 1033701.0 1 [7,] 159 11.92326 1593.1780 1035401.0 -1 [8,] 161 11.92332 1936.5978 1035739.4 -1 [9,] 235 11.92534 1736.5138 1035634.6 -1 [10,] 311 11.92740 1882.3228 1035657.3 -1 [11,] 313 11.92746 2114.8697 1035887.5 -1 [12,] 463 11.93159 1938.1847 1034004.4 -1 [13,] 464 11.93162 1535.3711 1031974.8 1 [14,] 465 11.93165 1176.2785 1033178.8 -1 [15,] 539 11.93372 1365.8525 1032569.2 -1 [16,] 540 11.93374 1749.7635 1031108.9 1 [17,] 541 11.93377 2087.5287 1033262.7 -1 [18,] 653 11.93691 2090.8203 1031866.3 -1 [19,] 759 11.93989 2220.9233 1030447.9 -1 [20,] 760 11.93991 1887.6181 1028118.2 1 [21,] 761 11.93994 1468.8068 1029560.8 -1 [22,] 763 11.94000 1146.1473 1029191.0 -1 [23,] 774 11.94031 978.1261 1027620.9 1 [24,] 775 11.94034 1001.4589 1028508.5 -1 [25,] 776 11.94037 1104.3482 1027349.8 1 [26,] 835 11.94201 1183.9856 1027572.1 -1 [27,] 836 11.94205 1568.6081 1026290.0 1 [28,] 837 11.94207 1861.9593 1028230.4 -1 [29,] 1013 11.94697 1883.6251 1027885.1 -1 [30,] 1015 11.94703 2226.4312 1028308.5 -1 [31,] 1026 11.94734 2267.0579 1026014.7 1 [32,] 1027 11.94736 2424.7944 1028291.4 -1 [33,] 1028 11.94739 2436.1858 1025577.0 1 [34,] 1029 11.94742 2269.5636 1027867.7 -1 [35,] 1103 11.94948 2212.7392 1028151.5 -1 [36,] 1104 11.94951 2239.4870 1025881.3 1 [37,] 1105 11.95375 -877.1382 1027015.3 -1 [38,] 1106 11.95377 -151.6805 1024637.1 1 [39,] 1107 11.95380 5028.5942 1026908.2 -1 [40,] 1108 11.95384 13749.2366 1024522.2 1 [41,] 1109 11.95388 -6239.3659 1026795.9 -1 [42,] 1110 11.95390 -29635.7273 1024457.4 1 [43,] 1111 11.95394 35059.9913 1026767.4 -1 [44,] 1112 11.95397 104749.8290 1024412.9 1 [45,] 1113 11.95400 -89587.1508 1026708.1 -1 [46,] 1114 11.95402 -478525.4800 996782.4 1 [47,] 1145 11.95497 437473.1121 412179.0 1 [48,] 1146 11.95501 222111.0074 1005996.6 -1 [49,] 1147 11.95504 63516.3265 1006154.2 1 [50,] 1148 11.95507 -42774.9458 1009757.4 -1 [51,] 1149 11.95510 -14288.1403 1008881.2 1 [52,] 1150 11.95512 13443.7896 1011765.0 -1 [53,] 1151 11.95515 6456.6029 1010459.9 1 [54,] 1152 11.95518 -1160.4966 1013074.0 -1 [55,] 1153 11.95521 773.1361 1011607.9 1 [56,] 1154 11.95524 2952.5865 1014099.5 -1 [57,] 1155 11.95527 2332.1376 1012593.2 1 [58,] 1156 11.95530 1769.6300 1015006.9 -1 [59,] 1157 11.95532 1904.5458 1013343.8 1 [60,] 1158 11.95535 2028.3642 1015691.8 -1 [61,] 1159 11.95538 1984.9529 1013971.9 1 [62,] 1160 11.95541 1949.3850 1016247.3 -1 [63,] 1161 11.95543 1983.6972 1014474.1 1 [64,] 1162 11.95546 2004.0457 1016744.1 -1 [65,] 1163 11.95549 2007.7247 1014921.1 1 [66,] 1164 11.95552 1995.9829 1017163.4 -1 [67,] 1165 11.95555 1993.8452 1015317.3 1 [68,] 1166 11.95557 1988.6361 1017522.1 -1 [69,] 1167 11.95560 1994.1799 1015648.0 1 [70,] 1168 11.95563 1989.7788 1017826.9 -1 [71,] 1169 11.95566 1989.7560 1015931.7 1 [72,] 1170 11.95568 1982.5225 1018083.7 -1 [73,] 1171 11.95571 1986.2450 1016170.8 1 [74,] 1172 11.95574 1982.6048 1018311.3 -1 [75,] 1173 11.95577 1987.0587 1016382.8 1 [76,] 1204 11.95663 1984.9770 1019362.1 -1 [77,] 1205 11.95666 1667.5089 1017313.5 1 [78,] 1206 11.95669 1346.3281 1018661.5 -1 [79,] 1208 11.95675 1126.4640 1018435.7 -1 [80,] 1280 11.95875 1425.7715 1016735.7 -1 [81,] 1343 11.96049 1485.9545 1013179.4 1 [82,] 1344 11.96052 1785.9945 1014517.7 -1 [83,] 1345 11.96055 1888.4035 1012108.6 1 [84,] 1346 11.96057 1638.5248 1013651.7 -1 [85,] 2026 11.97942 1938.7110 1005190.4 -1 [86,] 2310 11.98739 1874.0938 1005806.1 -1 [87,] 2642 11.99676 1803.6709 1007571.1 -1 [88,] 2646 11.99687 1751.9995 1007461.7 -1 [89,] 2647 11.99690 1441.9295 1005681.2 1 [90,] 2648 11.99692 1139.6804 1006816.3 -1 [91,] 2718 11.99887 1115.2760 1005259.6 -1 [92,] 2719 11.99890 1490.8721 1004089.7 1 [93,] 2720 11.99893 1854.9061 1005946.1 -1 [94,] 2984 12.00631 1794.1173 1001075.3 -1 [95,] 3308 12.01558 1896.3741 999931.8 -1 [96,] 3402 12.01835 1869.7951 999924.2 -1 [97,] 3403 12.01838 1552.3191 998053.8 1 [98,] 3404 12.01841 1185.9897 999244.8 -1 [99,] 3636 12.02511 1072.0172 996892.5 -1 [100,] 3637 12.02514 1388.2688 995801.6 1 [101,] 3638 12.02516 1636.2455 997452.4 -1 [102,] 3639 12.02519 1547.7187 995762.6 1 [103,] 3640 12.02522 1210.2813 996900.9 -1 [104,] 3641 12.02525 834.7187 995717.2 1 [105,] 3642 12.02528 601.2822 996293.3 -1 [106,] 3643 12.02530 667.4941 995680.3 1 [107,] 3644 12.02533 1124.0273 996829.5 -1 [108,] 3645 12.02536 1949.7565 995639.3 1 [109,] 3646 12.02539 2691.5846 998356.7 -1 [110,] 3648 12.02544 2718.5244 998286.4 -1 [111,] 3649 12.02547 2246.2460 995561.0 1 [112,] 3650 12.02550 1782.4448 997304.4 -1 [113,] 5127 12.06834 1833.8930 986523.9 1 [114,] 5128 12.06837 1830.5055 988455.3 -1 [115,] 5129 12.06840 1760.9590 986742.7 1 [116,] 5454 12.07799 1811.6306 991607.7 -1 [117,] 5526 12.08009 1987.6346 992559.3 -1 [118,] 5527 12.08012 1674.1493 990584.4 1 [119,] 5528 12.08015 1316.4082 991879.9 -1 [120,] 5596 12.08211 1263.3184 992896.4 -1 [121,] 5597 12.08214 1532.7449 991628.5 1 [122,] 5598 12.08217 1783.5161 993436.2 -1 [123,] 6260 12.10142 1641.1226 994747.8 -1 [124,] 6865 12.11917 2020.0460 998223.0 1 [125,] 6866 12.11920 1994.4621 1000394.0 -1 [126,] 6867 12.11923 1882.4671 998559.4 1 [127,] 6938 12.12131 2455.3667 1003321.1 -1 [128,] 6939 12.12134 2857.6339 1000848.1 1 [129,] 6940 12.12137 3295.4872 1004223.2 -1 [130,] 6941 12.12139 3754.0698 1000883.1 1 [131,] 6942 12.12142 4095.5154 1005021.2 -1 [132,] 6956 12.12187 2969.0716 1004242.2 -1 [133,] 6960 12.12199 2564.4001 1003942.9 -1 [134,] 6972 12.12234 2373.4984 1004256.4 -1 [135,] 6974 12.12241 2651.2430 1004589.8 -1 [136,] 6978 12.12253 1962.5017 1003968.0 -1 [137,] 6984 12.12271 2096.0102 1004341.6 -1 [138,] 6986 12.12277 2237.9862 1004555.8 -1 [139,] 7267 12.13090 2267.1069 1006907.9 1 [140,] 7268 12.13093 2267.0883 1009203.0 -1 [141,] 7269 12.13201 2235.1429 1007133.2 1 [142,] 7270 12.13204 2223.3586 1009429.8 -1 [143,] 7320 12.13349 1983.4559 1010013.6 -1 [144,] 7321 12.13352 1563.8771 1008076.9 1 [145,] 7322 12.13355 1196.6413 1009317.2 -1 [146,] 7392 12.13561 1276.8168 1011044.1 -1 [147,] 7393 12.13564 1620.0260 1009746.9 1 [148,] 7394 12.13567 1926.7414 1011731.9 -1 [149,] 7466 12.13776 1623.4292 1013302.4 -1 [150,] 7536 12.13977 1782.9107 1015035.1 -1 [151,] 7538 12.13983 2127.8559 1015381.3 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 1116 11.95408 347.799 [2,] 1117 11.95410 338.593 [3,] 1118 11.95413 354.216 [4,] 1128 11.95440 314.265 [5,] 1129 11.95442 432.467 [6,] 1409 11.96235 292.586 [7,] 4993 12.06434 295.341 [8,] 5238 12.07169 293.775 [9,] 6978 12.12253 988393.500 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -127.168 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 121.365 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 121.367 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 15.713 PER MEG" [1] "Screened 14 O2 and CO2 values when pdsp not controlling" [1] "Screened 13 O2 and CO2 values when pdwt not controlling" [1] "Screened 13 O2 values when pdo2 not controlling" [1] 391.2824 404.0600 393.4162 398.3380 398.2994 [1] -449.7074 -711.5200 -586.7901 -769.7950 -787.8880 [1] "Nominal linear calibrations:" [1] "co2scl = 1.054 co2off = -2.79 o2scla = -0.051 o2offa = -23.3" [1] "(dV/V)/(dXO2/XO2) = -4.103" [1] "(dV/V)/d(O2/N2) = -3.244" [1] "Finding cal and sample periods" [1] "Median Cal: 2.96 minutes" [1] "Average Cal: 3.14 minutes" [1] "Shortest Cal: 0.42 minutes" [1] "Longest Cal: 9.68 minutes" [1] "Removed 4 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 30" [1] "at: 34" [1] "at: 39" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-1HZ_DC8_20170111_R2.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 246762 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM2/MMS/MMS-20Hz_DC8_20170111_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 7145580 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.0163" [1] "HS CO2 vs. PACAB: m = -0.0239, r^2 = 0.78" [1] "LS CO2 vs. PACAB: m = -0.00858, r^2 = 0.25" [1] "HS+LS LIH2O vs. PACAB: m = 0.000151" [1] "HS LIH2O vs. PACAB: m = 0.000168, r^2 = 0.34" [1] "LS LIH2O vs. PACAB: m = 0.000133, r^2 = 0.49" [1] "HS+LS CO2 vs. LIH2O: m = 42" [1] "HS CO2 vs. LIH2O: m = 30.8, r^2 = 0.1" [1] "LS CO2 vs. LIH2O: m = 53.1, r^2 = 0.3" [1] "APCO2 vs. PACAB: m = -0.00779, r^2 = 0.01" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.532" [1] "HS O2 vs. PACAB: m = -0.53, r^2 = 0.22" [1] "LS O2 vs. PACAB: m = -0.534, r^2 = 0.7" [1] "HS+LS O2 vs. LIH2O: m = -1560" [1] "HS O2 vs. LIH2O: m = -3160, r^2 = 0.65" [1] "LS O2 vs. LIH2O: m = 42.5, r^2 = 0" [1] "HS+LS O2 vs. PAO2: m = -21.9" [1] "HS O2 vs. PAO2: m = -26.6, r^2 = 0.26" [1] "LS O2 vs. PAO2: m = -17.1, r^2 = 0.27" [1] "HS+LS O2 vs. TPBOX: m = 8.06" [1] "HS O2 vs. TPBOX: m = 10.4, r^2 = 0.68" [1] "LS O2 vs. TPBOX: m = 5.72, r^2 = 0.76" [1] "APO vs. PACAB: m = 0.14, r^2 = 0.01" [1] "APO vs. PAO2: m = -24, r^2 = 0.15" [1] "APO vs. TPBOX: m = 11.3, r^2 = 0.19" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.807, r^2 = 0.02" [1] "LS CO2 vs. LiCor Cell P: m = -1.83, r^2 = 0.17" [1] "HS CO2 vs. CO2 Vol P: m = -0.11, r^2 = 0.02" [1] "LS CO2 vs. CO2 Vol P: m = -0.179, r^2 = 0.09" [1] "HS CO2 vs. SLOPE: m = -0.365, r^2 = 0.04" [1] "LS CO2 vs. SLOPE: m = -0.441, r^2 = 0.07" [1] "HS O2 vs. O2 Vol P: m = -24.8, r^2 = 0.19" [1] "LS O2 vs. O2 Vol P: m = -16.7, r^2 = 0.28" [1] "HS O2 vs. O2 Cell T: m = -6.33, r^2 = 0.08" [1] "LS O2 vs. O2 Cell T: m = 0.402, r^2 = 0" [1] "HS O2 vs. CO2 Vol P: m = -12.7, r^2 = 0.34" [1] "LS O2 vs. CO2 Vol P: m = -9.57, r^2 = 0.44" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -6.7, r^2 = 0.06" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 7.82, r^2 = 0.18" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -12.7, r^2 = 0.34" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -9.57, r^2 = 0.44" [1] "HS O2 vs. LIH2O: m = -774, r^2 = 0.05" [1] "LS O2 vs. LIH2O: m = -154, r^2 = 0" [1] "HS O2 vs. SLOPE: m = -0.4, r^2 = 0.06" [1] "LS O2 vs. SLOPE: m = 0.769, r^2 = 0.1" [1] "HS CO2 vs. Time: m = 22.178, r^2 = 0.96" [1] "LS CO2 vs. Time: m = 22.528, r^2 = 0.96" [1] "HS CO2 vs. Cylinder T: m = -0.593, r^2 = 0.04" [1] "LS CO2 vs. Cylinder T: m = -1.092, r^2 = 0.186" [1] "HS CO2 vs. Regulator T: m = 0.134, r^2 = 0.04" [1] "LS CO2 vs. Regulator T: m = -0.127, r^2 = 0.044" [1] "HS CO2 vs. Ref. Volumes T: m = -0.074, r^2 = 0.01" [1] "LS CO2 vs. Ref. Volumes T: m = -0.299, r^2 = 0.211" [1] "HS CO2 vs. Manifold T: m = -0.273, r^2 = 0.07" [1] "LS CO2 vs. Manifold T: m = -0.295, r^2 = 0.183" [1] "HS CO2 vs. Pump Box T: m = 0.034, r^2 = 0" [1] "LS CO2 vs. Pump Box T: m = -0.065, r^2 = 0.049" [1] "HS O2 vs. Cylinder T: m = -39.002, r^2 = 0.24" [1] "LS O2 vs. Cylinder T: m = -29.997, r^2 = 0.234" [1] "HS O2 vs. Regulator T: m = 8.68, r^2 = 0.24" [1] "LS O2 vs. Regulator T: m = 7.47, r^2 = 0.256" [1] "HS O2 vs. Ref. Volumes T: m = -8.021, r^2 = 0.17" [1] "LS O2 vs. Ref. Volumes T: m = -7.193, r^2 = 0.205" [1] "HS O2 vs. Manifold T: m = -4.547, r^2 = 0.03" [1] "LS O2 vs. Manifold T: m = 5.4, r^2 = 0.102" [1] "HS O2 vs. Pump Box T: m = 7.384, r^2 = 0.3" [1] "LS O2 vs. Pump Box T: m = 4.761, r^2 = 0.436" [1] "HS CO2 vs. WT P: m = -0.027, r^2 = 0.42" [1] "LS CO2 vs. WT P: m = -0.028, r^2 = 0.598" [1] "HS CO2 vs. SP P: m = -0.0254, r^2 = 0.84" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.283, r^2 = 0.69" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.301, r^2 = 0.69" [1] "LS CO2 vs. SP P: m = -0.0128, r^2 = 0.31" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.055, r^2 = 0.34" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.073, r^2 = 0.34" [1] "HS CO2 vs. WT FL: m = 0.068, r^2 = 0.02" [1] "LS CO2 vs. WT FL: m = -0.012, r^2 = 0.003" [1] "HS CO2 vs. SP FL: m = 0.21, r^2 = 0.12" [1] "LS CO2 vs. SP FL: m = 0.022, r^2 = 0.012" [1] "HS O2 vs. SLPDIFF: m = -0.117, r^2 = 0" [1] "LS O2 vs. SLPDIFF: m = 0.85, r^2 = 0.042" [1] "HS O2 vs. WT P: m = -0.075, r^2 = 0" [1] "LS O2 vs. WT P: m = -0.648, r^2 = 0.519" [1] "HS O2 vs. SP P: m = -0.468, r^2 = 0.19" [1] "LS O2 vs. SP P: m = -0.598, r^2 = 0.792" [1] "HS O2 vs. WT FL: m = 2.576, r^2 = 0.05" [1] "LS O2 vs. WT FL: m = 1.505, r^2 = 0.083" [1] "HS O2 vs. SP FL: m = 3.472, r^2 = 0.04" [1] "LS O2 vs. SP FL: m = 1.855, r^2 = 0.149" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 84.61, 21.91, 68.62, 45.7, 40.59, 50.67, 69.85, 46.57, 49.44, 53.72" [1] "Empirical LP O2 lag flow(s): 104.3, 104, 104.1, 104.2, 104.1, 101.1, 101.9, 102.9, 101, 98" [1] "Empirical LP CO2 lag time(s): 82.1, 31.5, 78.81, 45.7, 53.12, 81.77, 60.09, 49.07, -11.21, 67.45" [1] "Empirical LP CO2 lag flow(s): 104.3, 104, 104.1, 104.2, 104.1, 101.1, 101.9, 102.9, 101, 98" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.85" [1] "Median all HS CO2 SD = 0.85" [1] "Median all LS CO2 SD = 0.82" [1] "Median all LT CO2 SD = 0.95" [1] "Median all WT CO2 SD = 0.9" [1] "Median all HS or LS CO2 SD = 0.83" [1] "Median all cal O2 SD = 3.12" [1] "Median all HS O2 SD = 2.23" [1] "Median all LS O2 SD = 2.4" [1] "Median all LT O2 SD = 2.99" [1] "Median all WT O2 SD = 2.81" [1] "Median all HS or LS O2 SD = 2.31" [1] "Median all cal CO2 Slope = 0" [1] "Median all HS CO2 Slope = 0.12" [1] "Median all LS CO2 Slope = 0.11" [1] "Median all LT CO2 Slope = 0.03" [1] "Median all WT CO2 Slope = -0.15" [1] "Median all HS or LS CO2 Slope = 0.11" [1] "Median all cal O2 Slope = -0.47" [1] "Median all HS O2 Slope = -0.36" [1] "Median all LS O2 Slope = -0.35" [1] "Median all LT O2 Slope = -0.08" [1] "Median all WT O2 Slope = -1.72" [1] "Median all HS or LS O2 Slope = -0.35" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 4.28 per meg" [1] "Initial O2 Calibration Offset = -1.38 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.36 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -7.12 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -6.29 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom2 inlet volumes" [1] "before any lag: 79395.64 98668.2" [1] "Time lag adjustments = 2 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 47.9 at 102.2 sccm" [1] "Median O2 delay + tlagff = 48.6 at 102.2 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 44.9 at 102.2 sccm" [1] "Median O2 delay from 3-way + tlagff = 45.7 at 102.2 sccm" [1] "after calc and ff lag: 79346.88 98619.19" [1] "2025-05-13 15:17:15 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 20 1-Hz values because of data gaps at:" [1] 12.02943 12.02944 12.02946 12.02947 12.02948 12.02949 12.02950 12.02951 [9] 12.02953 12.02954 12.02955 12.02956 12.02957 12.02958 12.02959 12.02961 [17] 12.02962 12.02963 12.02964 12.02965 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Outputting data files" [1] "Not reporting 45 O2 values from manual exclude period 12.081658 to 12.082967" [1] "Not reporting 45 APO values from manual exclude period 12.081658 to 12.082967" [1] "Not reporting 22 O2 values from manual exclude period 12.1211458333333 to 12.1218402777778" [1] "Not reporting 22 APO values from manual exclude period 12.1211458333333 to 12.1218402777778" [1] "Not reporting 22 CO2 values from manual exclude period 12.1211458333333 to 12.1218402777778" [1] "Not reporting 22 APO values from manual exclude period 12.1211458333333 to 12.1218402777778" [1] "Not reporting 4123 O2 values from manual exclude period 0 to 12.0392361111111" [1] "Not reporting 4123 APO values from manual exclude period 0 to 12.0392361111111" [1] "Not reporting 4123 CO2 values from manual exclude period 0 to 12.0392361111111" [1] "Not reporting 4123 APO values from manual exclude period 0 to 12.0392361111111" [1] "Not reporting 114 smoothed O2 values from manual exclude period 12.08107887538 to 12.0824020922996" [1] "Not reporting 114 smoothed APO values from manual exclude period 12.08107887538 to 12.0824020922996" [1] "Not reporting 0 smoothed O2 values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 0 smoothed APO values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 0 smoothed CO2 values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 0 smoothed APO values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 6739 smoothed O2 values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 6739 smoothed APO values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 6739 smoothed CO2 values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 6739 smoothed APO values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 114 smoothed O2 values from manual exclude period 12.08107887538 to 12.0824020922996" [1] "Not reporting 114 smoothed APO values from manual exclude period 12.08107887538 to 12.0824020922996" [1] "Not reporting 0 smoothed O2 values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 0 smoothed APO values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 0 smoothed CO2 values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 0 smoothed APO values from manual exclude period 12.1205496856758 to 12.1212544434784" [1] "Not reporting 6739 smoothed O2 values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 6739 smoothed APO values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 6739 smoothed CO2 values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Not reporting 6739 smoothed APO values from manual exclude period -0.000572853476613233 to 12.0387253017812" [1] "Plotting intervals" [1] "Excluding 81 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 81 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 81 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 81 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 81 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"