[1] "2025-05-13 15:07:17 MDT" options [1,] "file" "160823a" [2,] "flight" "RF11" [3,] "project" "ATOM1" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "1000" [7,] "spspco" "1000" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "7" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "aft" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "160823a" [1] "Reading in flight and plotting intervals" Read 19 records [1] "Reading in /scr/raf/stephens/AO2DAT/160823a.mr" Read 9962 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.42 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.42 seconds" [1] "New JOGEST = 2.42 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/160823a.hr" Read 39848 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 03:07:17 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 385.35 O2 = -511.3" [1] "position 2 cylinder OK30761 description: LS CO2 = 419.92 O2 = -737.5" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.43 O2 = -588.4" [1] "position 4 cylinder OK30764 description: WT CO2 = 404.04 O2 = -711.5" [1] "position 5 cylinder OK30769 description: LP CO2 = 398.34 O2 = -808.7" [1] 385.3541 419.9196 393.4294 404.0450 398.3395 [1] -511.2649 -737.5273 -588.3902 -711.4920 -808.6525 [1] "Nominal linear calibrations:" [1] "co2scl = 1.086 co2off = 8.8 o2scla = -0.047 o2offa = -182.9" [1] "(dV/V)/(dXO2/XO2) = -4.467" [1] "(dV/V)/d(O2/N2) = -3.532" [1] "Reading in very high resolution timeseries" Read 199240 records [1] 199240 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 03:07:18 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 03:07:19 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.532" [1] "o2scaleavenew_drelVdrelP = -4.467" [1] "median(o2scalenew) = -3.564" [1] "Empirical dV/V vs dP/P relationship =-2.593, r^2 =0.015, damping =0.581" [1] "Tue May 13 03:07:19 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1935 9272 $icochar [1] "0" "0" "20:01:25" "15:04:54" "17:35:00" [6] "17:51:00" "18:38:29" "18:52:58" "15:04:54" "236.645" [11] "236.68" "236.775" "236.814719" "236.771749" "236.815" [16] "236.819" "236.703278" "236.819568" "236.832076" $ecochar [1] "367" "15:04:54" "367" "20:01:25" "236.737508" [6] "236.754461" "236.781820" "236.797766" "236.645" "236.68" [11] "236.75" "20:01:25" "236.815894" "236.772924" "236.825" [16] "236.8205" "236.703649" "236.820435" "236.83281" $flag [1] "all" "LP" "LP" "flight" [5] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [9] "a" "b" "c" "d" [13] "donotreporto2" "donotreporto2" "MMS" "donotreporto2" [17] "donotreporto2" "donotreporto2" "donotreporto2" $ico2 [1] 0.0000 0.0000 236.8343 236.6284 236.7326 236.7438 236.7767 236.7868 [9] 236.6284 236.6450 236.6800 236.7750 236.8147 236.7717 236.8150 236.8190 [17] 236.7033 236.8196 236.8321 $eco2 [1] 367.0000 236.6284 367.0000 236.8343 236.7375 236.7545 236.7818 236.7978 [9] 236.6450 236.6800 236.7500 236.8343 236.8159 236.7729 236.8250 236.8205 [17] 236.7036 236.8204 236.8328 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1934 1934 236.6284 8.115891 0.00096190 0.00030995 0.00030995 1934 1935 1935 236.6284 8.108216 -0.00298025 0.00042385 0.00042385 1935 1936 1936 236.6284 8.115729 -0.00097940 0.00055955 0.00055955 1936 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1934 10.5 6.00 16.00 11970.50 1 8.115643 8.115872 1935 10.5 2.25 16.75 3001.75 -1 8.109514 8.108805 1936 10.5 1.00 17.00 25.50 1 8.116316 8.116082 vuvsigpdprcorr 1934 8.115798 1935 8.108704 1936 8.115949 [1] 0.6283786 0.6284079 0.6284379 [,1] [,2] [,3] [1,] 0.628391 1 6 [2,] 0.628402 -1 6 [3,] 0.628408 -1 1 [4,] 0.628414 -1 1 [5,] 0.628419 -1 1 [6,] 0.628432 1 1 [7,] 0.628438 1 1 [8,] 0.628444 1 1 [9,] 0.628450 1 1 [10,] 0.628461 -1 1 [11,] 0.628467 -1 1 [12,] 0.628473 -1 1 [13,] 0.628479 -1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 9271 9271 236.8343 7.940844 -0.00108220 0.01714195 0.01714195 9271 9272 9272 236.8343 7.954635 -0.00096895 0.01715910 0.01715910 9272 9273 9273 236.8343 7.941419 -0.00117340 0.01713060 0.01713060 9273 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 9271 10.5 1.00 29.00 44530.50 -1 7.947879 7.947618 9272 10.5 4.75 29.75 11141.75 1 7.961656 7.961422 9273 10.5 6.00 30.00 25.50 -1 7.948497 7.948214 vuvsigpdprcorr 9271 7.943487 9272 7.957279 9273 7.944086 [1] 0.8342937 0.8343212 0.8343483 [,1] [,2] [,3] [1,] 0.834305 -1 1 [2,] 0.834315 1 1 [3,] 0.834321 1 6 [4,] 0.834327 1 6 [5,] 0.834333 1 6 [6,] 0.834342 -1 6 [7,] 0.834348 -1 6 [8,] 0.834354 -1 6 [9,] 0.834360 -1 6 [10,] 0.834370 1 6 [11,] 0.834376 1 6 [12,] 0.834382 1 6 [13,] 0.834387 1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1935 9272 $icochar [1] "0" "0" "20:01:25" "15:04:54" "17:35:00" [6] "17:51:00" "18:38:29" "18:52:58" "15:04:54" "236.645" [11] "236.68" "236.775" "236.814719" "236.771749" "236.815" [16] "236.819" "236.703278" "236.819568" "236.832076" $ecochar [1] "367" "15:04:54" "367" "20:01:25" "236.737508" [6] "236.754461" "236.781820" "236.797766" "236.645" "236.68" [11] "236.75" "20:01:25" "236.815894" "236.772924" "236.825" [16] "236.8205" "236.703649" "236.820435" "236.83281" $flag [1] "all" "LP" "LP" "flight" [5] "donotreporto2" "donotreporto2" "donotreporto2" "donotreporto2" [9] "a" "b" "c" "d" [13] "donotreporto2" "donotreporto2" "MMS" "donotreporto2" [17] "donotreporto2" "donotreporto2" "donotreporto2" $ico2 [1] 0.0000 0.0000 236.8343 236.6284 236.7326 236.7438 236.7767 236.7868 [9] 236.6284 236.6450 236.6800 236.7750 236.8147 236.7717 236.8150 236.8190 [17] 236.7033 236.8196 236.8321 $eco2 [1] 367.0000 236.6284 367.0000 236.8343 236.7375 236.7545 236.7818 236.7978 [9] 236.6450 236.6800 236.7500 236.8343 236.8159 236.7729 236.8250 236.8205 [17] 236.7036 236.8204 236.8328 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1934 1934 236.6284 8.115891 0.00096190 0.00030995 0.00030995 1934 1935 1935 236.6284 8.108216 -0.00298025 0.00042385 0.00042385 1935 1936 1936 236.6284 8.115729 -0.00097940 0.00055955 0.00055955 1936 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1934 10.5 6.00 16.00 11970.50 1 8.115643 8.115872 1935 10.5 2.25 16.75 3001.75 -1 8.109514 8.108805 1936 10.5 1.00 17.00 25.50 1 8.116316 8.116082 vuvsigpdprcorr 1934 8.115798 1935 8.108704 1936 8.115949 [1] 0.6283786 0.6284079 0.6284379 [,1] [,2] [,3] [1,] 0.628391 1 6 [2,] 0.628402 -1 6 [3,] 0.628408 -1 1 [4,] 0.628414 -1 1 [5,] 0.628419 -1 1 [6,] 0.628432 1 1 [7,] 0.628438 1 1 [8,] 0.628444 1 1 [9,] 0.628450 1 1 [10,] 0.628461 -1 1 [11,] 0.628467 -1 1 [12,] 0.628473 -1 1 [13,] 0.628479 -1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 9271 9271 236.8343 7.940844 -0.00108220 0.01714195 0.01714195 9271 9272 9272 236.8343 7.954635 -0.00096895 0.01715910 0.01715910 9272 9273 9273 236.8343 7.941419 -0.00117340 0.01713060 0.01713060 9273 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 9271 10.5 1.00 29.00 44530.50 -1 7.947879 7.947618 9272 10.5 4.75 29.75 11141.75 1 7.961656 7.961422 9273 10.5 6.00 30.00 25.50 -1 7.948497 7.948214 vuvsigpdprcorr 9271 7.943487 9272 7.957279 9273 7.944086 [1] 0.8342937 0.8343212 0.8343483 [,1] [,2] [,3] [1,] 0.834305 -1 1 [2,] 0.834315 1 1 [3,] 0.834321 1 6 [4,] 0.834327 1 6 [5,] 0.834333 1 6 [6,] 0.834342 -1 6 [7,] 0.834348 -1 6 [8,] 0.834354 -1 6 [9,] 0.834360 -1 6 [10,] 0.834370 1 6 [11,] 0.834376 1 6 [12,] 0.834382 1 6 [13,] 0.834387 1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 03:07:42 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 10219983.047712 SECONDS" [1] "Tue May 13 03:07:42 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 4.0335 4.4712 [1] -3.676364 -3.316530 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -179.184 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 88.307 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 84.097 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.463 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 9 [1] 12 [1] 16 [1] 16 [1] 17 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1942 236.6286 -1034.3454 1042848.8 -1 [2,] 1943 236.6287 -1857.7089 1043619.5 1 [3,] 1944 236.6287 -1716.3922 1040527.8 -1 [4,] 1945 236.6287 -810.5566 1041218.7 1 [5,] 3111 236.6616 -1707.4352 993615.1 1 [6,] 3112 236.6616 -1471.0243 991378.2 -1 [7,] 3113 236.6616 -1373.1046 992033.4 1 [8,] 3114 236.6617 -1573.8444 990042.9 -1 [9,] 3117 236.6617 -1663.8738 991337.7 1 [10,] 3118 236.6618 -2067.7139 989918.2 -1 [11,] 3119 236.6618 -1929.3966 992696.6 1 [12,] 3120 236.6618 -1508.5374 991572.6 -1 [13,] 3750 236.6794 -1876.3737 979797.7 -1 [14,] 5220 236.7206 -1792.3878 990294.2 -1 [15,] 6748 236.7635 -1893.8721 989408.3 -1 [16,] 9272 236.8344 -1690.9844 1021560.3 -1 [17,] 9961 236.8537 -2382.7506 1054524.9 1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 3025 236.6592 8.980935e+11 [2,] 4560 236.7021 9.308718e+05 [3,] 7931 236.7967 9.105922e+11 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -179.184 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 88.307 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 84.097 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.463 PER MEG" [1] 385.3541 419.9196 393.4294 404.0450 398.3395 [1] -511.2649 -737.5273 -588.3902 -711.4920 -808.6525 [1] "Nominal linear calibrations:" [1] "co2scl = 1.086 co2off = 8.8 o2scla = -0.047 o2offa = -182.8" [1] "(dV/V)/(dXO2/XO2) = -4.464" [1] "(dV/V)/d(O2/N2) = -3.529" [1] "Finding cal and sample periods" [1] "Median Cal: 2.94 minutes" [1] "Average Cal: 2.83 minutes" [1] "Shortest Cal: 0.28 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 3 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 35" [1] "at: 40" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM1/MMS/MMS-1HZ_DC8_20160823_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 318654 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM1/MMS/MMS-20Hz_DC8_20160823_R0.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 9222642 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00457" [1] "HS CO2 vs. PACAB: m = -0.00627, r^2 = 0.4" [1] "LS CO2 vs. PACAB: m = -0.00287, r^2 = 0.07" [1] "HS+LS LIH2O vs. PACAB: m = -0.000241" [1] "HS LIH2O vs. PACAB: m = -0.000256, r^2 = 0.9" [1] "LS LIH2O vs. PACAB: m = -0.000226, r^2 = 0.84" [1] "HS+LS CO2 vs. LIH2O: m = 29.7" [1] "HS CO2 vs. LIH2O: m = 31, r^2 = 0.72" [1] "LS CO2 vs. LIH2O: m = 28.3, r^2 = 0.41" [1] "APCO2 vs. PACAB: m = -0.0321, r^2 = 0.13" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.214" [1] "HS O2 vs. PACAB: m = 0.345, r^2 = 0.4" [1] "LS O2 vs. PACAB: m = 0.083, r^2 = 0.06" [1] "HS+LS O2 vs. LIH2O: m = -1290" [1] "HS O2 vs. LIH2O: m = -1730, r^2 = 0.72" [1] "LS O2 vs. LIH2O: m = -842, r^2 = 0.35" [1] "HS+LS O2 vs. PAO2: m = -19.8" [1] "HS O2 vs. PAO2: m = -23.9, r^2 = 0.99" [1] "LS O2 vs. PAO2: m = -15.8, r^2 = 0.85" [1] "HS+LS O2 vs. TPBOX: m = 7.23" [1] "HS O2 vs. TPBOX: m = 9.22, r^2 = 0.95" [1] "LS O2 vs. TPBOX: m = 5.25, r^2 = 0.72" [1] "APO vs. PACAB: m = 0.646, r^2 = 0.13" [1] "APO vs. PAO2: m = -37.6, r^2 = 0.12" [1] "APO vs. TPBOX: m = 15.4, r^2 = 0.15" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 2.09, r^2 = 0.43" [1] "LS CO2 vs. LiCor Cell P: m = 2.25, r^2 = 0.32" [1] "HS CO2 vs. CO2 Vol P: m = 0.248, r^2 = 0.68" [1] "LS CO2 vs. CO2 Vol P: m = 0.3, r^2 = 0.62" [1] "HS CO2 vs. SLOPE: m = 1.15, r^2 = 0.45" [1] "LS CO2 vs. SLOPE: m = 1.59, r^2 = 0.67" [1] "HS O2 vs. O2 Vol P: m = -23.9, r^2 = 0.98" [1] "LS O2 vs. O2 Vol P: m = -14.5, r^2 = 0.72" [1] "HS O2 vs. O2 Cell T: m = 15.6, r^2 = 0.79" [1] "LS O2 vs. O2 Cell T: m = 11.9, r^2 = 0.78" [1] "HS O2 vs. CO2 Vol P: m = -14.8, r^2 = 0.78" [1] "LS O2 vs. CO2 Vol P: m = -7.11, r^2 = 0.44" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -15.1, r^2 = 0.2" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -1.59, r^2 = 0.02" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -14.8, r^2 = 0.78" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -7.11, r^2 = 0.44" [1] "HS O2 vs. LIH2O: m = -1770, r^2 = 0.69" [1] "LS O2 vs. LIH2O: m = -715, r^2 = 0.27" [1] "HS O2 vs. SLOPE: m = 2.56, r^2 = 0.78" [1] "LS O2 vs. SLOPE: m = 0.309, r^2 = 0.07" [1] "HS CO2 vs. Time: m = 22.169, r^2 = 0.85" [1] "LS CO2 vs. Time: m = 22.468, r^2 = 0.85" [1] "HS CO2 vs. Cylinder T: m = 0.537, r^2 = 0.37" [1] "LS CO2 vs. Cylinder T: m = 0.511, r^2 = 0.227" [1] "HS CO2 vs. Regulator T: m = -0.343, r^2 = 0.35" [1] "LS CO2 vs. Regulator T: m = -0.579, r^2 = 0.575" [1] "HS CO2 vs. Ref. Volumes T: m = 0.206, r^2 = 0.14" [1] "LS CO2 vs. Ref. Volumes T: m = 0.189, r^2 = 0.071" [1] "HS CO2 vs. Manifold T: m = -0.182, r^2 = 0.59" [1] "LS CO2 vs. Manifold T: m = -0.306, r^2 = 0.81" [1] "HS CO2 vs. Pump Box T: m = -0.134, r^2 = 0.63" [1] "LS CO2 vs. Pump Box T: m = -0.188, r^2 = 0.756" [1] "HS O2 vs. Cylinder T: m = -31.161, r^2 = 0.4" [1] "LS O2 vs. Cylinder T: m = -10.668, r^2 = 0.125" [1] "HS O2 vs. Regulator T: m = 26.154, r^2 = 0.65" [1] "LS O2 vs. Regulator T: m = 15.902, r^2 = 0.546" [1] "HS O2 vs. Ref. Volumes T: m = -5.932, r^2 = 0.04" [1] "LS O2 vs. Ref. Volumes T: m = -1.535, r^2 = 0.006" [1] "HS O2 vs. Manifold T: m = 12.917, r^2 = 0.95" [1] "LS O2 vs. Manifold T: m = 8.301, r^2 = 0.751" [1] "HS O2 vs. Pump Box T: m = 9.251, r^2 = 0.95" [1] "LS O2 vs. Pump Box T: m = 4.74, r^2 = 0.609" [1] "HS CO2 vs. WT P: m = -0.005, r^2 = 0.2" [1] "LS CO2 vs. WT P: m = -0.003, r^2 = 0.043" [1] "HS CO2 vs. SP P: m = -0.00506, r^2 = 0.31" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.148, r^2 = 0.32" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.143, r^2 = 0.32" [1] "LS CO2 vs. SP P: m = -0.00225, r^2 = 0.04" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.03, r^2 = 0.15" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.029, r^2 = 0.15" [1] "HS CO2 vs. WT FL: m = -0.137, r^2 = 0.46" [1] "LS CO2 vs. WT FL: m = -0.242, r^2 = 0.711" [1] "HS CO2 vs. SP FL: m = 0.006, r^2 = 0" [1] "LS CO2 vs. SP FL: m = -0.072, r^2 = 0.067" [1] "HS O2 vs. SLPDIFF: m = 6.021, r^2 = 0.4" [1] "LS O2 vs. SLPDIFF: m = -0.571, r^2 = 0.018" [1] "HS O2 vs. WT P: m = 0.328, r^2 = 0.32" [1] "LS O2 vs. WT P: m = 0.049, r^2 = 0.02" [1] "HS O2 vs. SP P: m = 0.333, r^2 = 0.32" [1] "LS O2 vs. SP P: m = 0.016, r^2 = 0.002" [1] "HS O2 vs. WT FL: m = 10.462, r^2 = 0.86" [1] "LS O2 vs. WT FL: m = 6.761, r^2 = 0.697" [1] "HS O2 vs. SP FL: m = 1.13, r^2 = 0.01" [1] "LS O2 vs. SP FL: m = 3.141, r^2 = 0.162" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 33.89, 49.06" [1] "Empirical LP O2 lag flow(s): 110.8, 99.8" [1] "Empirical LP CO2 lag time(s): 67.15, 53.82" [1] "Empirical LP CO2 lag flow(s): 110.8, 99.8" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.82" [1] "Median all HS CO2 SD = 0.76" [1] "Median all LS CO2 SD = 0.85" [1] "Median all LT CO2 SD = 0.74" [1] "Median all WT CO2 SD = 0.85" [1] "Median all HS or LS CO2 SD = 0.81" [1] "Median all cal O2 SD = 3.54" [1] "Median all HS O2 SD = 1.96" [1] "Median all LS O2 SD = 2.05" [1] "Median all LT O2 SD = 3.6" [1] "Median all WT O2 SD = 1.97" [1] "Median all HS or LS O2 SD = 2.03" [1] "Median all cal CO2 Slope = -0.04" [1] "Median all HS CO2 Slope = -0.08" [1] "Median all LS CO2 Slope = 0.02" [1] "Median all LT CO2 Slope = -0.03" [1] "Median all WT CO2 Slope = 0.16" [1] "Median all HS or LS CO2 Slope = -0.05" [1] "Median all cal O2 Slope = 0.46" [1] "Median all HS O2 Slope = 0.66" [1] "Median all LS O2 Slope = 0.56" [1] "Median all LT O2 Slope = 5.39" [1] "Median all WT O2 Slope = 0.13" [1] "Median all HS or LS O2 Slope = 0.66" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 13.77 per meg" [1] "Initial O2 Calibration Offset = -5.99 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.99 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -18.14 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -30.42 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom1 RF04-RF11 outer 1/8\" inlet volumes" [1] "before any lag: 49572.52 73755.96" [1] "Time lag adjustments = 7 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 50.4 at 105.9 sccm" [1] "Median O2 delay + tlagff = 51.1 at 105.9 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 48.7 at 105.9 sccm" [1] "Median O2 delay from 3-way + tlagff = 49.4 at 105.9 sccm" [1] "after calc and ff lag: 49520.18 73704.96" [1] "2025-05-13 15:08:12 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] NA NA NA NA NA [6] NA NA NA 10.83775400 14.82853933 [11] -7.04787305 -7.04787305 -7.04787305 -7.04787305 -2.77692919 [16] -2.77692919 -2.77692919 -1.50864860 -9.60929452 -9.60929452 [21] -9.60929452 -9.60929452 -10.96470430 -11.70206503 -11.70206503 [26] -11.70206503 -0.93098948 -0.09982466 -0.02413135 1.48153934 [31] 1.43323669 1.29469246 -1.47902710 -2.19526018 4.83830188 [36] 5.67553068 4.53946856 -4.28682496 -8.99363153 -10.54850455 [41] -10.54850455 -7.60749545 -7.20053634 -6.28553282 -9.15410826 [46] -10.87314918 -10.87314918 -17.38424919 -13.83129032 -13.83129032 [51] -16.74901242 -20.69173906 -20.23096428 -11.77297122 -11.82849962 [56] -15.95491352 -17.86679686 -18.48231116 -23.11403693 -30.90304949 [61] -30.90304949 -25.82335136 -23.95169635 -41.86863617 -41.86863617 [66] -39.23961553 -38.84433231 -3.52747371 -3.52747371 -4.11369258 [71] -4.76884341 -19.71178715 -27.65839845 -28.38009728 -28.92744528 [76] -25.93087473 -17.02962703 -16.83565175 -16.63199464 -18.23098186 [81] -19.94325441 -19.85893042 -20.14125513 -20.52170084 -20.36103634 [86] -20.52620396 -20.75076315 -21.33320020 -18.31084534 -19.13104770 [91] -19.46415313 -19.46415313 -23.74649987 -21.06853029 -21.06853029 [96] -19.69024542 -8.95232148 -8.95232148 -15.60498980 -19.62989682 [101] -16.60743718 -4.91151155 -4.91151155 -6.91481024 -13.74589035 [106] -13.74589035 -13.79640706 -13.89219607 -12.15406372 -12.85578254 [111] -12.85578254 -12.85578254 -17.24677952 -22.50185337 -21.79816071 [116] -11.55928193 -11.90450774 -16.02726911 -18.54283824 -18.54283824 [121] -18.54283824 -26.56505482 -26.58384636 -26.58384636 -25.14682388 [126] -20.98637348 -20.98637348 -20.98637348 -20.98637348 -11.58174393 [131] -11.64685434 -11.64685434 -13.07025396 -12.13732647 0.81732450 [136] -9.80004098 -11.49639776 -5.50978158 -5.50978158 1.67203621 [141] -8.97474730 -11.33480880 -19.33843882 -19.33843882 -19.28467440 [146] -21.06876441 -22.52216781 -22.07700747 -21.92320992 -21.86400419 [151] -15.51936176 -15.51936176 -15.55782641 -20.49602226 -24.27227067 [156] -24.29200508 -24.29200508 -24.29200508 -15.18671419 -12.07546584 [161] -7.53986573 -0.72189497 2.62945791 2.62945791 2.62945791 [166] 2.62945791 -13.52985928 -20.55787911 -20.55787911 -20.55787911 [171] -24.11795370 -25.06015812 -25.90154378 -25.90154378 -21.54038103 [176] -15.91508311 -5.04853621 -5.04853621 -3.75581665 -3.30196734 [181] -2.43764039 -2.43764039 -4.37955849 -8.45593082 -12.04900670 [186] -11.87034817 -7.31571143 -6.40366943 -6.80563886 -12.76074810 [191] -4.28083357 2.91026391 2.91026391 7.29970908 6.98581299 [196] 2.38264571 4.72835017 4.72835017 2.31353689 -6.63937884 [201] -6.82375541 -6.05414116 -5.59945481 -12.49214266 -7.62715960 [206] -4.72926951 -4.73259373 -3.65233909 -14.99262716 -14.99262716 [211] -14.99262716 -13.80227086 -12.27247857 -12.27247857 -12.27247857 [216] -8.39622399 -10.74188079 -10.74188079 -10.74188079 -13.04459458 [221] -10.67469515 -9.16094492 -9.16094492 -9.16094492 -13.72029833 [226] -11.98926410 -10.54790961 -5.89058742 -2.61289455 -2.61289455 [231] -2.61289455 -3.23015313 -4.83725214 -6.05134944 -6.45598559 [236] -6.45598559 -9.72772431 -9.52203058 -8.84937724 -8.21522297 [241] -19.24668236 -19.24668236 -19.24668236 -19.24668236 -16.06168434 [246] -13.24784793 -10.59271748 -10.59271748 -7.20331000 -7.20331000 [251] -7.30980228 -9.43335264 -10.05542677 -10.05542677 -10.05542677 [256] -10.05542677 -8.28049878 -9.28336771 -9.79918481 -9.79918481 [261] -13.53425847 -16.99913066 -17.47049996 -19.02281065 -20.77407067 [266] -24.71846798 -24.71846798 -24.71846798 -24.78977412 -19.28272605 [271] -20.11286385 -20.11286385 -20.11286385 -17.97746651 -17.81541190 [276] -13.50523873 -10.23613555 -5.31018173 -5.31018173 -5.31018173 [281] -5.29532766 -16.65693361 -13.76404214 -12.29298316 -12.29298316 [286] -0.86108699 -0.86108699 -0.86108699 -7.43577264 -8.43551148 [291] -7.79124799 -7.79124799 -7.79124799 -6.40666002 5.09068293 [296] 10.37947588 10.37947588 8.73326949 -3.27730448 -9.56456201 [301] -16.54140313 -17.86598695 -19.65504315 -19.65504315 -19.65504315 [306] -18.37176662 -16.19850447 -16.19850447 -16.19850447 -16.19850447 [311] -7.12403968 -8.05993835 -9.52892731 -10.54247754 -8.97227280 [316] -8.97227280 -8.97227280 -9.09641749 -15.51483458 -15.70699920 [321] -15.70699920 -15.70699920 [1] 84.78714 86.31293 89.15469 92.07231 94.80497 97.30523 99.23958 [8] 101.03459 102.76838 104.58974 106.18650 107.58817 108.47540 108.93803 [15] 108.95892 108.94880 109.34392 110.43381 111.66976 113.43575 114.58086 [22] 116.25449 117.54333 118.91367 120.51990 122.60778 125.75567 128.10969 [29] 130.62238 132.96423 135.42915 138.01966 140.71971 143.53554 146.71320 [36] 149.78190 152.64001 155.44164 157.74668 159.11983 160.78698 162.60082 [43] 164.64167 166.73328 168.76865 171.07044 173.10926 175.42565 177.71207 [50] 180.25529 183.06458 186.60289 189.03641 191.79059 195.13064 198.03069 [57] 200.79800 203.70202 205.92741 207.93031 209.23957 211.27859 212.92849 [64] 214.56859 216.23927 217.87231 219.57643 221.07655 222.72309 224.29757 [71] 225.65730 227.08728 228.46824 229.96609 231.10207 231.69496 231.74063 [78] 231.33804 230.91537 230.74024 230.62927 230.45426 231.04021 231.83010 [85] 232.38578 232.72857 233.19463 234.40344 236.09496 237.79724 239.97387 [92] 241.97163 243.93541 246.65114 248.92102 251.10315 253.58414 255.83202 [99] 258.25672 260.65571 263.00470 265.72890 268.04404 270.56940 272.71494 [106] 274.95788 276.96324 279.49913 281.84228 284.01490 286.23348 288.40277 [113] 290.11090 292.75718 295.02946 297.33308 299.48480 301.64068 303.80287 [120] 306.06362 308.03716 309.69101 311.50957 313.24548 315.04751 317.15435 [127] 318.59250 319.50140 320.36678 321.43867 322.46465 323.39691 324.31285 [134] 325.23843 326.20561 326.99444 327.90502 328.73019 329.56157 330.46620 [141] 331.30245 332.13758 333.00094 333.84087 334.68859 335.44386 336.41740 [148] 337.34483 338.55133 339.59775 341.54564 342.95072 344.44806 345.85106 [155] 347.31677 348.71032 350.19281 351.39809 353.08979 354.48361 355.79082 [162] 357.44317 359.14799 360.40803 362.25977 363.85958 365.43158 367.03409 [169] 368.61175 370.22832 371.94818 373.70339 375.56439 377.61026 379.46361 [176] 381.72769 384.04130 386.21223 388.42701 390.51604 392.72414 395.05973 [183] 397.47694 400.54737 403.95235 407.49455 411.02177 414.59516 417.63643 [190] 421.41895 425.42705 429.06470 432.40344 435.77406 438.83939 441.89567 [197] 444.90926 447.88518 451.02545 453.81470 457.38640 460.18087 463.01760 [204] 465.58680 468.14700 470.49810 473.05143 475.28896 477.44221 479.47755 [211] 481.61985 483.67846 485.79857 487.62012 489.19428 490.83973 492.40039 [218] 493.91508 495.44010 496.94422 498.53181 499.92180 501.46898 502.66762 [225] 504.28390 505.71841 506.85251 508.04759 509.16672 510.35620 511.50540 [232] 512.63863 513.89053 515.00847 516.26871 517.45312 518.61663 519.89687 [239] 521.05853 522.09334 523.47360 524.60225 525.77851 526.98700 528.19537 [246] 529.11733 530.43657 531.63116 532.71862 533.88874 535.20611 536.18621 [253] 537.57733 538.65159 539.81742 540.91723 542.05681 543.26317 544.40384 [260] 545.54764 546.76419 547.93981 549.10816 550.21068 551.35913 552.48216 [267] 553.61487 554.78136 555.88661 556.90402 558.17948 559.27255 560.41888 [274] 561.49690 562.49081 563.67720 564.90924 566.03265 567.11879 568.34321 [281] 569.38988 570.51239 571.51478 572.60215 573.64158 574.74694 575.77937 [288] 576.76345 577.78048 579.00251 579.92233 581.12351 582.12383 583.06562 [295] 584.18062 585.39629 586.43804 587.50665 588.52298 589.88077 590.96230 [302] 592.04144 593.08839 594.12801 595.13875 596.22116 597.17914 598.14537 [309] 599.21475 600.26661 601.34025 602.38617 603.41441 604.28036 605.49597 [316] 606.53419 607.58514 608.57024 609.64940 610.68511 611.70278 612.77111 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 173 O2 values from manual exclude period 236.732638888889 to 236.737508" [1] "Not reporting 173 APO values from manual exclude period 236.732638888889 to 236.737508" [1] "Not reporting 381 O2 values from manual exclude period 236.74375 to 236.754461" [1] "Not reporting 381 APO values from manual exclude period 236.74375 to 236.754461" [1] "Not reporting 180 O2 values from manual exclude period 236.776724537037 to 236.78182" [1] "Not reporting 180 APO values from manual exclude period 236.776724537037 to 236.78182" [1] "Not reporting 390 O2 values from manual exclude period 236.786782407407 to 236.797766" [1] "Not reporting 390 APO values from manual exclude period 236.786782407407 to 236.797766" [1] "Not reporting 41 O2 values from manual exclude period 236.814719 to 236.815894" [1] "Not reporting 41 APO values from manual exclude period 236.814719 to 236.815894" [1] "Not reporting 42 O2 values from manual exclude period 236.771749 to 236.772924" [1] "Not reporting 42 APO values from manual exclude period 236.771749 to 236.772924" [1] "Not reporting 53 O2 values from manual exclude period 236.819 to 236.8205" [1] "Not reporting 53 APO values from manual exclude period 236.819 to 236.8205" [1] "Not reporting 13 O2 values from manual exclude period 236.703278 to 236.703649" [1] "Not reporting 13 APO values from manual exclude period 236.703278 to 236.703649" [1] "Not reporting 30 O2 values from manual exclude period 236.819568 to 236.820435" [1] "Not reporting 30 APO values from manual exclude period 236.819568 to 236.820435" [1] "Not reporting 26 O2 values from manual exclude period 236.832076 to 236.83281" [1] "Not reporting 26 APO values from manual exclude period 236.832076 to 236.83281" [1] "Not reporting 421 smoothed O2 values from manual exclude period 236.732089758379 to 236.736957222318" [1] "Not reporting 421 smoothed APO values from manual exclude period 236.732089758379 to 236.736957222318" [1] "Not reporting 926 smoothed O2 values from manual exclude period 236.74319443733 to 236.753904127903" [1] "Not reporting 926 smoothed APO values from manual exclude period 236.74319443733 to 236.753904127903" [1] "Not reporting 440 smoothed O2 values from manual exclude period 236.776166944766 to 236.781259235563" [1] "Not reporting 440 smoothed APO values from manual exclude period 236.776166944766 to 236.781259235563" [1] "Not reporting 947 smoothed O2 values from manual exclude period 236.786220667941 to 236.797179915083" [1] "Not reporting 947 smoothed APO values from manual exclude period 236.786220667941 to 236.797179915083" [1] "Not reporting 102 smoothed O2 values from manual exclude period 236.814075161967 to 236.815255709684" [1] "Not reporting 102 smoothed APO values from manual exclude period 236.814075161967 to 236.815255709684" [1] "Not reporting 103 smoothed O2 values from manual exclude period 236.771178287439 to 236.77236296872" [1] "Not reporting 103 smoothed APO values from manual exclude period 236.771178287439 to 236.77236296872" [1] "Not reporting 131 smoothed O2 values from manual exclude period 236.818367856588 to 236.819878923543" [1] "Not reporting 131 smoothed APO values from manual exclude period 236.818367856588 to 236.819878923543" [1] "Not reporting 33 smoothed O2 values from manual exclude period 236.702643165353 to 236.70302372416" [1] "Not reporting 33 smoothed APO values from manual exclude period 236.702643165353 to 236.70302372416" [1] "Not reporting 75 smoothed O2 values from manual exclude period 236.818936237815 to 236.819813853446" [1] "Not reporting 75 smoothed APO values from manual exclude period 236.818936237815 to 236.819813853446" [1] "Not reporting 64 smoothed O2 values from manual exclude period 236.831437006656 to 236.832176079135" [1] "Not reporting 64 smoothed APO values from manual exclude period 236.831437006656 to 236.832176079135" [1] "Not reporting 421 smoothed O2 values from manual exclude period 236.732089758379 to 236.736957222318" [1] "Not reporting 421 smoothed APO values from manual exclude period 236.732089758379 to 236.736957222318" [1] "Not reporting 926 smoothed O2 values from manual exclude period 236.74319443733 to 236.753904127903" [1] "Not reporting 926 smoothed APO values from manual exclude period 236.74319443733 to 236.753904127903" [1] "Not reporting 440 smoothed O2 values from manual exclude period 236.776166944766 to 236.781259235563" [1] "Not reporting 440 smoothed APO values from manual exclude period 236.776166944766 to 236.781259235563" [1] "Not reporting 947 smoothed O2 values from manual exclude period 236.786220667941 to 236.797179915083" [1] "Not reporting 947 smoothed APO values from manual exclude period 236.786220667941 to 236.797179915083" [1] "Not reporting 102 smoothed O2 values from manual exclude period 236.814075161967 to 236.815255709684" [1] "Not reporting 102 smoothed APO values from manual exclude period 236.814075161967 to 236.815255709684" [1] "Not reporting 103 smoothed O2 values from manual exclude period 236.771178287439 to 236.77236296872" [1] "Not reporting 103 smoothed APO values from manual exclude period 236.771178287439 to 236.77236296872" [1] "Not reporting 131 smoothed O2 values from manual exclude period 236.818367856588 to 236.819878923543" [1] "Not reporting 131 smoothed APO values from manual exclude period 236.818367856588 to 236.819878923543" [1] "Not reporting 33 smoothed O2 values from manual exclude period 236.702643165353 to 236.70302372416" [1] "Not reporting 33 smoothed APO values from manual exclude period 236.702643165353 to 236.70302372416" [1] "Not reporting 75 smoothed O2 values from manual exclude period 236.818936237815 to 236.819813853446" [1] "Not reporting 75 smoothed APO values from manual exclude period 236.818936237815 to 236.819813853446" [1] "Not reporting 64 smoothed O2 values from manual exclude period 236.831437006656 to 236.832176079135" [1] "Not reporting 64 smoothed APO values from manual exclude period 236.831437006656 to 236.832176079135" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1608/AO2_DC8_20160823_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 70812 items [1] 11 1772 17703 [1] "done reading AO2" [1] 2016 2016 2016 2016 2016 2016 [1] 211 211 211 211 211 211 [1] 52390 52400 52410 52420 52430 52440 [1] "2016-07-29 14:33:10 UTC" "2016-07-29 14:33:20 UTC" [3] "2016-07-29 14:33:30 UTC" "2016-07-29 14:33:40 UTC" [5] "2016-07-29 14:33:50 UTC" "2016-07-29 14:34:00 UTC" [1] -331.855 -323.667 -327.769 -312.971 -306.666 -308.221 [1] 17572 [1] "Average Date / Time for slice RF11 = 2016-08-23 17:25:17.2140431404114" [1] "sum(lsel) = 883" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 132.280 812.412 [1] 132.280 812.412 [1] 187.588 867.720 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 698.222" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM1 RF11 APO_AO2 range = -321.85,-265.9" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1608/AO2_DC8_20160823_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 70812 items [1] 11 1772 17703 [1] "done reading AO2" [1] 2016 2016 2016 2016 2016 2016 [1] 211 211 211 211 211 211 [1] 52390 52400 52410 52420 52430 52440 [1] "2016-07-29 14:33:10 UTC" "2016-07-29 14:33:20 UTC" [3] "2016-07-29 14:33:30 UTC" "2016-07-29 14:33:40 UTC" [5] "2016-07-29 14:33:50 UTC" "2016-07-29 14:34:00 UTC" [1] -686.170 -664.361 -645.644 -620.863 -609.519 -607.167 [1] 17574 [1] "Average Date / Time for slice RF11 = 2016-08-23 17:25:13.280543088913" [1] "sum(lsel) = 884" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 132.280 812.412 [1] 132.280 812.412 [1] 187.588 867.720 [1] 8.571429e-03 9.999990e+05 [1] "highestmid = 698.222" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM1 RF11 O2_AO2 range = -609.38,-546.17" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item [1] "Reading /h/eol/stephens/NCAR/VUV2/AO2/DATA/1608/AO2_DC8_20160823_R5.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 3 items Read 3 items Read 1 item Read 1 item Read 4 items Read 70812 items [1] 11 1772 17703 [1] "done reading AO2" [1] 2016 2016 2016 2016 2016 2016 [1] 211 211 211 211 211 211 [1] 52390 52400 52410 52420 52430 52440 [1] "2016-07-29 14:33:10 UTC" "2016-07-29 14:33:20 UTC" [3] "2016-07-29 14:33:30 UTC" "2016-07-29 14:33:40 UTC" [5] "2016-07-29 14:33:50 UTC" "2016-07-29 14:34:00 UTC" [1] 417.4485 414.8557 410.5120 408.6122 407.6516 406.9080 [1] 26682 [1] "Average Date / Time for slice RF11 = 2016-08-23 17:39:12.278589963913" [1] "sum(lsel) = 1163" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 132.280 812.412 [1] 132.280 812.412 [1] 187.588 867.720 [1] 0 999999 [1] "highestmid = 698.222" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ATOM1 RF11 CO2_AO2 range = 401.26,405.94" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 3 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"