[1] "2025-05-13 14:33:20 MDT" options [1,] "file" "160712a" [2,] "flight" "TF01" [3,] "project" "ATOM1" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "1000" [7,] "spspco" "1000" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "7" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "aft" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "TRUE" [62,] "reavecals" "FALSE" [63,] "locate" "TRUE" [64,] "icartt" "lookup" [65,] "icarttrev" "1" [66,] "mmsrev" "TRUE" [67,] "usespline" "4pt" [68,] "updnave" "160712a" [1] "Reading in flight and plotting intervals" Read 14 records [1] "Reading in /scr/raf/stephens/AO2DAT/160712a.mr" Read 7693 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.42 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.43 seconds" [1] "New JOGEST = 2.43 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/160712a.hr" Read 30775 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 7693 30773 [1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH" [1] 7693 30773 [1] "Converting hrdata statout" [1] "Tue May 13 02:33:20 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 3141 records Read 536 records Read 2575 records [1] "No O2 data for JJ8856 fill 2" [1] "No O2 data for JJ8578 fill 2" [1] "No O2 data for JJ8578 fill 3" [1] "No O2 data for JJ8578 fill 4" [1] "No O2 data for JJ651 fill 2" [1] "No O2 data for JJ651 fill 3" [1] "No O2 data for JJ651 fill 4" [1] "No O2 data for JJ651 fill 5" [1] "No O2 data for JJ22398 fill 3" [1] "No O2 data for JJ22398 fill 5" [1] "No O2 data for JA02405 fill 1" [1] "No O2 data for JA02405 fill 2" [1] "No O2 data for JA02405 fill 3" [1] "No O2 data for JA02405 fill 4" [1] "No O2 data for JA02385 fill 2" [1] "No O2 data for JA02385 fill 3" [1] "No O2 data for JA02385 fill 4" [1] "No O2 data for JA02379 fill 2" [1] "No O2 data for JA02379 fill 3" [1] "No O2 data for JA02379 fill 4" [1] "No O2 data for JA02379 fill 5" [1] "No O2 data for JA02377 fill 2" [1] "No O2 data for JA02377 fill 3" [1] "No O2 data for JA02377 fill 4" [1] "No O2 data for JA02347 fill 1" [1] "No O2 data for JA02347 fill 3" [1] "No O2 data for JA02347 fill 4" [1] "No O2 data for JA02347 fill 5" [1] "No O2 data for FA02361 fill 4" [1] "No O2 data for FA02360 fill 3" [1] "No O2 data for CC328855 fill 1" [1] "No O2 data for CC328855 fill 2" Read 536 records [1] "position 1 cylinder OK30762 description: HS CO2 = 385.35 O2 = -515.1" [1] "position 2 cylinder OK30761 description: LS CO2 = 419.92 O2 = -740.6" [1] "position 3 cylinder OK30772 description: LT CO2 = 393.44 O2 = -587.8" [1] "position 4 cylinder OK30770 description: WT CO2 = 395.88 O2 = -752.3" [1] "position 5 cylinder OK30769 description: LP CO2 = 398.34 O2 = -830" [1] 385.3476 419.9187 393.4351 395.8754 398.3387 [1] -515.0530 -740.5818 -587.8193 -752.3179 -829.9759 [1] "Nominal linear calibrations:" [1] "co2scl = 1.031 co2off = 24.61 o2scla = -0.045 o2offa = -179" [1] "(dV/V)/(dXO2/XO2) = -4.692" [1] "(dV/V)/d(O2/N2) = -3.709" [1] "Reading in very high resolution timeseries" Read 153860 records [1] 153860 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 02:33:24 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 02:33:25 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.709" [1] "o2scaleavenew_drelVdrelP = -4.692" [1] "median(o2scalenew) = -3.722" [1] "Empirical dV/V vs dP/P relationship =-3.735, r^2 =0.729, damping =0.796" [1] "Tue May 13 02:33:26 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 405 1227 $icochar [1] "194.754" "0" "22:34:07" "194.775" "194.775" [6] "194.88" "194.793750" "194.811849" "194.845133" "194.860924" [11] "194.913158" "20:15:00" "194.862" "194.893" $ecochar [1] "367" "18:41:00" "367" "194.95" "194.88" [6] "194.95" "194.796301" "194.815250" "194.846712" "194.865419" [11] "194.925548" "20:30:00" "194.88" "194.91" $flag [1] "all" "LP" "LP" "a" [5] "b" "c" "donotreporto2" "donotreporto2" [9] "donotreporto2" "donotreporto2" "donotreporto2" "MMS" [13] "SPD1" "SPD2" $ico2 [1] 194.7540 0.0000 194.9404 194.7750 194.7750 194.8800 194.7937 194.8118 [9] 194.8451 194.8609 194.9132 194.8438 194.8620 194.8930 $eco2 [1] 367.0000 194.7785 367.0000 194.9500 194.8800 194.9500 194.7963 194.8152 [9] 194.8467 194.8654 194.9255 194.8542 194.8800 194.9100 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 404 404 194.7503 8.241269 0.00436875 0.00793850 0.00793850 404 405 405 194.7550 9.078369 -0.12827805 0.00690095 0.00690095 405 406 407 194.7576 8.807436 -0.00119305 0.00660945 0.00660945 407 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 404 10.5 3.0 6.00 470.50 1 8.242646 8.243849 405 10.5 4.5 6.75 126.75 -1 9.143390 9.099782 406 10.5 5.0 7.00 30.50 1 8.810716 8.810366 vuvsigpdprcorr 404 8.241662 405 9.097666 406 8.808423 [1] 0.7502827 0.7550442 0.7576241 [,1] [,2] [,3] [1,] 0.750294 1 3 [2,] 0.750302 -1 3 [3,] 0.757594 -1 5 [4,] 0.757600 -1 5 [5,] 0.757605 -1 5 [6,] 0.757610 -1 5 [7,] 0.757619 1 5 [8,] 0.757624 1 5 [9,] 0.757629 1 5 [10,] 0.757634 1 5 [11,] 0.757643 -1 5 [12,] 0.757648 -1 5 [13,] 0.757653 -1 5 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1226 1227 194.7784 9.248164 0.00065265 0.00183035 0.00183035 1227 1227 1228 194.7785 9.239134 0.00001110 0.00183765 0.00183765 1228 1228 1229 194.7785 9.248519 -0.00062715 0.00189620 0.00189620 1229 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1226 10.5 6.00 14.00 4370.50 1 9.248678 9.248877 1227 10.5 2.25 14.75 1101.75 -1 9.239926 9.239929 1228 10.5 1.00 15.00 25.50 1 9.249619 9.249428 vuvsigpdprcorr 1226 9.248320 1227 9.239370 1228 9.248851 [1] 0.7784490 0.7784762 0.7785042 [,1] [,2] [,3] [1,] 0.778455 1 6 [2,] 0.778460 1 6 [3,] 0.778470 -1 6 [4,] 0.778476 -1 1 [5,] 0.778482 -1 1 [6,] 0.778488 -1 1 [7,] 0.778498 1 1 [8,] 0.778504 1 1 [9,] 0.778510 1 1 [10,] 0.778516 1 1 [11,] 0.778527 -1 1 [12,] 0.778532 -1 1 [13,] 0.778538 -1 1 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 405 1227 $icochar [1] "194.754" "0" "22:34:07" "194.775" "194.775" [6] "194.88" "194.793750" "194.811849" "194.845133" "194.860924" [11] "194.913158" "20:15:00" "194.862" "194.893" $ecochar [1] "367" "18:41:00" "367" "194.95" "194.88" [6] "194.95" "194.796301" "194.815250" "194.846712" "194.865419" [11] "194.925548" "20:30:00" "194.88" "194.91" $flag [1] "all" "LP" "LP" "a" [5] "b" "c" "donotreporto2" "donotreporto2" [9] "donotreporto2" "donotreporto2" "donotreporto2" "MMS" [13] "SPD1" "SPD2" $ico2 [1] 194.7540 0.0000 194.9404 194.7750 194.7750 194.8800 194.7937 194.8118 [9] 194.8451 194.8609 194.9132 194.8438 194.8620 194.8930 $eco2 [1] 367.0000 194.7785 367.0000 194.9500 194.8800 194.9500 194.7963 194.8152 [9] 194.8467 194.8654 194.9255 194.8542 194.8800 194.9100 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 404 404 194.7503 8.241269 0.00436875 0.00793850 0.00793850 404 405 405 194.7550 9.078369 -0.12827805 0.00690095 0.00690095 405 406 407 194.7576 8.807436 -0.00119305 0.00660945 0.00660945 407 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 404 10.5 3.0 6.00 470.50 1 8.242646 8.243849 405 10.5 4.5 6.75 126.75 -1 9.143390 9.099782 406 10.5 5.0 7.00 30.50 1 8.810716 8.810366 vuvsigpdprcorr 404 8.241662 405 9.097666 406 8.808423 [1] 0.7502827 0.7550442 0.7576241 [,1] [,2] [,3] [1,] 0.750294 1 3 [2,] 0.750302 -1 3 [3,] 0.757594 -1 5 [4,] 0.757600 -1 5 [5,] 0.757605 -1 5 [6,] 0.757610 -1 5 [7,] 0.757619 1 5 [8,] 0.757624 1 5 [9,] 0.757629 1 5 [10,] 0.757634 1 5 [11,] 0.757643 -1 5 [12,] 0.757648 -1 5 [13,] 0.757653 -1 5 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1226 1227 194.7784 9.248164 0.00065265 0.00183035 0.00183035 1227 1227 1228 194.7785 9.239134 0.00001110 0.00183765 0.00183765 1228 1228 1229 194.7785 9.248519 -0.00062715 0.00189620 0.00189620 1229 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1226 10.5 6.00 14.00 4370.50 1 9.248678 9.248877 1227 10.5 2.25 14.75 1101.75 -1 9.239926 9.239929 1228 10.5 1.00 15.00 25.50 1 9.249619 9.249428 vuvsigpdprcorr 1226 9.248320 1227 9.239370 1228 9.248851 [1] 0.7784490 0.7784762 0.7785042 [,1] [,2] [,3] [1,] 0.778455 1 6 [2,] 0.778460 1 6 [3,] 0.778470 -1 6 [4,] 0.778476 -1 1 [5,] 0.778482 -1 1 [6,] 0.778488 -1 1 [7,] 0.778498 1 1 [8,] 0.778504 1 1 [9,] 0.778510 1 1 [10,] 0.778516 1 1 [11,] 0.778527 -1 1 [12,] 0.778532 -1 1 [13,] 0.778538 -1 1 [1] "JOGAVES DOES NOT MATCH" [1] "Plotting Jog Shapes" [1] "Tue May 13 02:33:43 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 12619085.504832 SECONDS" [1] "Tue May 13 02:33:43 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "Removed 403 medium-rate record(s) > eco or < ico" [1] "from: 1" [1] "to: 403" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -37920.907 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -33343.041 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -33331.638 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -11.758 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 3 [1] 4 [1] 8 [1] 9 [1] 10 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 194.7576 32128.239 972532.0 -1 [2,] 2 194.7576 13233.055 974047.0 1 [3,] 3 194.7577 -1196.446 973220.6 -1 [4,] 4 194.7577 -6001.790 974871.7 1 [5,] 5 194.7577 -1213.168 974290.9 -1 [6,] 6 194.7578 -416.085 975919.8 1 [7,] 1577 194.7995 -1619.176 1018676.4 -1 [8,] 2993 194.8392 -1888.183 995698.8 -1 [9,] 4253 194.8747 -1606.901 994208.9 -1 [10,] 6587 194.9404 -1637.062 999944.4 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 1087 194.7859 9.205928e+08 [2,] 2277 194.8191 3.690320e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 228.925 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 194.011 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 193.745 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -11.758 PER MEG" [1] 385.3476 419.9187 393.4351 395.8754 398.3387 [1] -515.0530 -740.5818 -587.8193 -752.3179 -829.9759 [1] "Nominal linear calibrations:" [1] "co2scl = 1.035 co2off = 22.68 o2scla = -0.045 o2offa = -179.7" [1] "(dV/V)/(dXO2/XO2) = -4.653" [1] "(dV/V)/d(O2/N2) = -3.679" [1] "Finding cal and sample periods" [1] "Median Cal: 2.93 minutes" [1] "Average Cal: 2.96 minutes" [1] "Shortest Cal: 2.91 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 22" [1] "at: 27" [1] "Reading in aircraft data" [1] "Reading /scr/raf/stephens/HUMERGE/ATOM1/MMS/MMS-1HZ_DC8_20160712_R1.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 17 items Read 17 items Read 1 item Read 1 item Read 18 items Read 250812 items [1] "Reading /scr/raf/stephens/HUMERGE/ATOM1/MMS/MMS-20Hz_DC8_20160712_R0.ict" Read 2 items Read 4 items Read 2 items Read 3 items Read 1 item Read 1 item Read 25 items Read 25 items Read 1 item Read 1 item Read 26 items Read 7262476 items [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00127" [1] "HS CO2 vs. PACAB: m = 0.00114, r^2 = 0.46" [1] "LS CO2 vs. PACAB: m = -0.00369, r^2 = 0.46" [1] "HS+LS LIH2O vs. PACAB: m = -0.000226" [1] "HS LIH2O vs. PACAB: m = -0.000229, r^2 = 0.96" [1] "LS LIH2O vs. PACAB: m = -0.000224, r^2 = 0.99" [1] "HS+LS CO2 vs. LIH2O: m = 5.32" [1] "HS CO2 vs. LIH2O: m = -4.83, r^2 = 0.85" [1] "LS CO2 vs. LIH2O: m = 15.5, r^2 = 0.41" [1] "APCO2 vs. PACAB: m = 0.0911, r^2 = 0.56" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.269" [1] "HS O2 vs. PACAB: m = 0.359, r^2 = 0.62" [1] "LS O2 vs. PACAB: m = 0.18, r^2 = 0.18" [1] "HS+LS O2 vs. LIH2O: m = -964" [1] "HS O2 vs. LIH2O: m = -1320, r^2 = 0.53" [1] "LS O2 vs. LIH2O: m = -611, r^2 = 0.1" [1] "HS+LS O2 vs. PAO2: m = -24.5" [1] "HS O2 vs. PAO2: m = -18, r^2 = 0.08" [1] "LS O2 vs. PAO2: m = -31.1, r^2 = 0.24" [1] "HS+LS O2 vs. TPBOX: m = 14.5" [1] "HS O2 vs. TPBOX: m = 15, r^2 = 0.82" [1] "LS O2 vs. TPBOX: m = 14, r^2 = 0.68" [1] "APO vs. PACAB: m = -1.82, r^2 = 0.56" [1] "APO vs. PAO2: m = -21, r^2 = 0.02" [1] "APO vs. TPBOX: m = 3.32, r^2 = 0" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.979, r^2 = 0.03" [1] "LS CO2 vs. LiCor Cell P: m = -0.774, r^2 = 0.03" [1] "HS CO2 vs. CO2 Vol P: m = -0.35, r^2 = 0.23" [1] "LS CO2 vs. CO2 Vol P: m = -0.138, r^2 = 0.05" [1] "HS CO2 vs. SLOPE: m = -2.61, r^2 = 0.64" [1] "LS CO2 vs. SLOPE: m = -1, r^2 = 0.2" [1] "HS O2 vs. O2 Vol P: m = -14.8, r^2 = 0.07" [1] "LS O2 vs. O2 Vol P: m = -32.4, r^2 = 0.21" [1] "HS O2 vs. O2 Cell T: m = -0.743, r^2 = 0" [1] "LS O2 vs. O2 Cell T: m = 6.15, r^2 = 0.07" [1] "HS O2 vs. CO2 Vol P: m = -34.7, r^2 = 0.58" [1] "LS O2 vs. CO2 Vol P: m = -27.2, r^2 = 0.27" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -8.39, r^2 = 0.5" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 19.9, r^2 = 0.49" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -34.7, r^2 = 0.58" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -27.2, r^2 = 0.27" [1] "HS O2 vs. LIH2O: m = -1330, r^2 = 0.47" [1] "LS O2 vs. LIH2O: m = -830, r^2 = 0.13" [1] "HS O2 vs. SLOPE: m = -1.92, r^2 = 0.9" [1] "LS O2 vs. SLOPE: m = -1.08, r^2 = 0.42" [1] "HS CO2 vs. Time: m = 23.01, r^2 = 0.91" [1] "LS CO2 vs. Time: m = 22.485, r^2 = 0.91" [1] "HS CO2 vs. Cylinder T: m = -0.857, r^2 = 0.14" [1] "LS CO2 vs. Cylinder T: m = -0.35, r^2 = 0.037" [1] "HS CO2 vs. Regulator T: m = 0.203, r^2 = 0.04" [1] "LS CO2 vs. Regulator T: m = -0.063, r^2 = 0.006" [1] "HS CO2 vs. Ref. Volumes T: m = 0.049, r^2 = 0.01" [1] "LS CO2 vs. Ref. Volumes T: m = 0.035, r^2 = 0.005" [1] "HS CO2 vs. Manifold T: m = 0.248, r^2 = 0.45" [1] "LS CO2 vs. Manifold T: m = 0.16, r^2 = 0.176" [1] "HS CO2 vs. Pump Box T: m = 0.165, r^2 = 0.45" [1] "LS CO2 vs. Pump Box T: m = 0.027, r^2 = 0.014" [1] "HS O2 vs. Cylinder T: m = -104.371, r^2 = 0.54" [1] "LS O2 vs. Cylinder T: m = -70.567, r^2 = 0.203" [1] "HS O2 vs. Regulator T: m = 1.214, r^2 = 0" [1] "LS O2 vs. Regulator T: m = 29.605, r^2 = 0.167" [1] "HS O2 vs. Ref. Volumes T: m = -17.593, r^2 = 0.22" [1] "LS O2 vs. Ref. Volumes T: m = -1.561, r^2 = 0.001" [1] "HS O2 vs. Manifold T: m = 5.622, r^2 = 0.06" [1] "LS O2 vs. Manifold T: m = 15.32, r^2 = 0.221" [1] "HS O2 vs. Pump Box T: m = 12.43, r^2 = 0.67" [1] "LS O2 vs. Pump Box T: m = 14.276, r^2 = 0.557" [1] "HS CO2 vs. WT P: m = 0.001, r^2 = 0.01" [1] "LS CO2 vs. WT P: m = -0.002, r^2 = 0.117" [1] "HS CO2 vs. SP P: m = 0.000511, r^2 = 0.05" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.312, r^2 = 0.59" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.313, r^2 = 0.59" [1] "LS CO2 vs. SP P: m = -0.00174, r^2 = 0.34" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.053, r^2 = 0.67" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.047, r^2 = 0.67" [1] "HS CO2 vs. WT FL: m = 0.181, r^2 = 0.27" [1] "LS CO2 vs. WT FL: m = 0.021, r^2 = 0.005" [1] "HS CO2 vs. SP FL: m = 0.002, r^2 = 0" [1] "LS CO2 vs. SP FL: m = 0.055, r^2 = 0.142" [1] "HS O2 vs. SLPDIFF: m = 0.95, r^2 = 0.02" [1] "LS O2 vs. SLPDIFF: m = -3.762, r^2 = 0.093" [1] "HS O2 vs. WT P: m = 0.353, r^2 = 0.6" [1] "LS O2 vs. WT P: m = 0.221, r^2 = 0.204" [1] "HS O2 vs. SP P: m = 0.373, r^2 = 0.6" [1] "LS O2 vs. SP P: m = 0.2, r^2 = 0.203" [1] "HS O2 vs. WT FL: m = 8.933, r^2 = 0.17" [1] "LS O2 vs. WT FL: m = 16.026, r^2 = 0.39" [1] "HS O2 vs. SP FL: m = -7.718, r^2 = 0.41" [1] "LS O2 vs. SP FL: m = -2.311, r^2 = 0.034" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 17.43, 72.59" [1] "Empirical LP O2 lag flow(s): 111.5, 105.7" [1] "Empirical LP CO2 lag time(s): 19.85, 50.65" [1] "Empirical LP CO2 lag flow(s): 111.5, 105.7" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.78" [1] "Median all HS CO2 SD = 0.73" [1] "Median all LS CO2 SD = 0.83" [1] "Median all LT CO2 SD = 0.76" [1] "Median all WT CO2 SD = 0.84" [1] "Median all HS or LS CO2 SD = 0.78" [1] "Median all cal O2 SD = 3.84" [1] "Median all HS O2 SD = 2.64" [1] "Median all LS O2 SD = 7.05" [1] "Median all LT O2 SD = 9.16" [1] "Median all WT O2 SD = 2.19" [1] "Median all HS or LS O2 SD = 3.66" [1] "Median all cal CO2 Slope = 0" [1] "Median all HS CO2 Slope = 0.01" [1] "Median all LS CO2 Slope = 0.14" [1] "Median all LT CO2 Slope = -0.22" [1] "Median all WT CO2 Slope = -0.16" [1] "Median all HS or LS CO2 Slope = 0.07" [1] "Median all cal O2 Slope = 1.33" [1] "Median all HS O2 Slope = 3.8" [1] "Median all LS O2 Slope = 11.83" [1] "Median all LT O2 Slope = 15.66" [1] "Median all WT O2 Slope = -1.12" [1] "Median all HS or LS O2 Slope = 5.66" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 8.53 per meg" [1] "Initial O2 Calibration Offset = -11.64 per meg" [1] "SD of O2 Calibration (post-takeoff) = 5.29 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -14.2 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -13.41 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ATom1 TF01-TF02 outer 5/16\" inlet volumes" [1] "before any lag: 65456.81 82958.26" [1] "Time lag adjustments = 7 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 52.7 at 108.2 sccm" [1] "Median O2 delay + tlagff = 53.4 at 108.2 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 47.9 at 108.2 sccm" [1] "Median O2 delay from 3-way + tlagff = 48.6 at 108.2 sccm" [1] "after calc and ff lag: 65382.68 82902.43" [1] "2025-05-13 14:34:05 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Outputting data files" [1] "Not reporting 92 O2 values from manual exclude period 194.79375 to 194.796301" [1] "Not reporting 92 APO values from manual exclude period 194.79375 to 194.796301" [1] "Not reporting 122 O2 values from manual exclude period 194.811849 to 194.81525" [1] "Not reporting 122 APO values from manual exclude period 194.811849 to 194.81525" [1] "Not reporting 56 O2 values from manual exclude period 194.845133 to 194.846712" [1] "Not reporting 56 APO values from manual exclude period 194.845133 to 194.846712" [1] "Not reporting 160 O2 values from manual exclude period 194.860924 to 194.865419" [1] "Not reporting 160 APO values from manual exclude period 194.860924 to 194.865419" [1] "Not reporting 437 O2 values from manual exclude period 194.913158 to 194.925548" [1] "Not reporting 437 APO values from manual exclude period 194.913158 to 194.925548" [1] "Not reporting 221 smoothed O2 values from manual exclude period 194.79319113709 to 194.795752139574" [1] "Not reporting 221 smoothed APO values from manual exclude period 194.79319113709 to 194.795752139574" [1] "Not reporting 293 smoothed O2 values from manual exclude period 194.811284577719 to 194.814671876881" [1] "Not reporting 293 smoothed APO values from manual exclude period 194.811284577719 to 194.814671876881" [1] "Not reporting 137 smoothed O2 values from manual exclude period 194.844513985409 to 194.846106646731" [1] "Not reporting 137 smoothed APO values from manual exclude period 194.844513985409 to 194.846106646731" [1] "Not reporting 389 smoothed O2 values from manual exclude period 194.86035198776 to 194.86485190976" [1] "Not reporting 389 smoothed APO values from manual exclude period 194.86035198776 to 194.86485190976" [1] "Not reporting 1070 smoothed O2 values from manual exclude period 194.91259492115 to 194.924987793551" [1] "Not reporting 1070 smoothed APO values from manual exclude period 194.91259492115 to 194.924987793551" [1] "Not reporting 221 smoothed O2 values from manual exclude period 194.79319113709 to 194.795752139574" [1] "Not reporting 221 smoothed APO values from manual exclude period 194.79319113709 to 194.795752139574" [1] "Not reporting 293 smoothed O2 values from manual exclude period 194.811284577719 to 194.814671876881" [1] "Not reporting 293 smoothed APO values from manual exclude period 194.811284577719 to 194.814671876881" [1] "Not reporting 137 smoothed O2 values from manual exclude period 194.844513985409 to 194.846106646731" [1] "Not reporting 137 smoothed APO values from manual exclude period 194.844513985409 to 194.846106646731" [1] "Not reporting 389 smoothed O2 values from manual exclude period 194.86035198776 to 194.86485190976" [1] "Not reporting 389 smoothed APO values from manual exclude period 194.86035198776 to 194.86485190976" [1] "Not reporting 1070 smoothed O2 values from manual exclude period 194.91259492115 to 194.924987793551" [1] "Not reporting 1070 smoothed APO values from manual exclude period 194.91259492115 to 194.924987793551" [1] "Plotting intervals" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 5 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"