[1] "2025-05-13 14:11:35 MDT" options [1,] "file" "160125a" [2,] "flight" "RF05" [3,] "project" "ORCAS" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "300" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "11" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "FALSE" [26,] "vxavail" "FALSE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "aft" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "full" [48,] "o2caltype" "full" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "4pt" [68,] "updnave" "160125a" [1] "Reading in flight and plotting intervals" Read 8 records [1] "Reading in /scr/raf/stephens/AO2DAT/160125a.mr" Read 3905 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.28 seconds" [1] "New JOGEST = 2.28 seconds" [1] "New VALVE SKIP = 26 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/160125a.hr" Read 15621 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 02:11:35 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30771 description: HS CO2 = 391.3 O2 = -452.6" [1] "position 2 cylinder OK30764 description: LS CO2 = 404.02 O2 = -715.2" [1] "position 3 cylinder OK30772 description: LT CO2 = 392.41 O2 = -581.9" [1] "position 4 cylinder OK30762 description: WT CO2 = 410.62 O2 = -688.7" [1] "position 5 cylinder OK30761 description: LP CO2 = 369.44 O2 = -819.5" [1] 391.3025 404.0230 392.4100 410.6170 369.4436 [1] -452.6143 -715.2115 -581.9304 -688.7000 -819.5255 [1] "Nominal linear calibrations:" [1] "co2scl = 1.078 co2off = -13.67 o2scla = -0.047 o2offa = -176.6" [1] "(dV/V)/(dXO2/XO2) = -4.49" [1] "(dV/V)/d(O2/N2) = -3.55" [1] "Reading in very high resolution timeseries" Read 78100 records [1] 78100 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 02:11:36 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 02:11:36 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.55" [1] "o2scaleavenew_drelVdrelP = -4.49" [1] "median(o2scalenew) = -3.533" [1] "Empirical dV/V vs dP/P relationship =-2.459, r^2 =0.026, damping =0.548" [1] "Tue May 13 02:11:36 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "Plotting Jog Shapes" [1] "Tue May 13 02:11:43 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 1101264.420672 SECONDS" [1] "Tue May 13 02:11:43 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "Removed 696 medium-rate record(s) from screenall period" [1] "from: 3209" [1] "to: 3904" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 669.041 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 281.637 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 262.59 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -29.958 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 9 [1] 28 [1] 38 [1] 38 [1] 38 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 25.49230 -791.966 960771.3 1 [2,] 2 25.49233 -1094.860 960089.2 -1 [3,] 3 25.49235 -1240.466 961393.9 1 [4,] 82 25.49441 -1248.270 965727.4 -1 [5,] 83 25.49443 -1581.300 966969.9 1 [6,] 84 25.49446 -1931.867 965115.6 -1 [7,] 158 25.49645 -2111.553 969266.2 -1 [8,] 159 25.49648 -1852.872 971387.6 1 [9,] 160 25.49650 -1523.390 970016.4 -1 [10,] 162 25.49656 -1187.340 970427.9 -1 [11,] 210 25.49785 -1110.139 972889.0 -1 [12,] 238 25.49861 -1630.680 975103.7 -1 [13,] 240 25.49866 -1501.704 975498.2 -1 [14,] 749 25.51240 -1683.088 998737.1 1 [15,] 750 25.51243 -1726.158 997170.3 -1 [16,] 751 25.51245 -1727.628 999038.4 1 [17,] 996 25.51912 -1656.820 1013507.8 -1 [18,] 1002 25.51928 -1305.238 1014103.8 -1 [19,] 1076 25.52122 -1096.790 1015820.1 -1 [20,] 1077 25.52125 -1431.321 1016949.8 1 [21,] 1078 25.52127 -1784.406 1015111.7 -1 [22,] 1154 25.52322 -1794.287 1015511.7 -1 [23,] 1217 25.52483 -1542.428 1017266.5 1 [24,] 1218 25.52486 -1442.836 1015612.8 -1 [25,] 1219 25.52488 -1592.969 1016723.3 1 [26,] 1220 25.52491 -1770.753 1014775.3 -1 [27,] 1310 25.52715 -1274.936 1014776.3 -1 [28,] 1311 25.52718 -1635.781 1016074.1 1 [29,] 1312 25.52720 -1986.579 1014031.9 -1 [30,] 1390 25.52920 -2071.367 1013115.4 -1 [31,] 1391 25.52923 -1790.686 1015214.9 1 [32,] 1392 25.52925 -1471.697 1013765.1 -1 [33,] 1474 25.53142 -1593.465 1012322.9 -1 [34,] 2258 25.55230 -1665.728 1000310.7 -1 [35,] 2264 25.55247 -1295.224 1000630.9 -1 [36,] 2344 25.55458 -1236.647 999648.2 -1 [37,] 2345 25.55460 -1632.601 1000902.0 1 [38,] 2346 25.55463 -2000.187 998879.0 -1 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 669.041 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 281.637 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 262.59 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -29.958 PER MEG" [1] "MAX ORIG-PDPRCORR DIFFERENCE > 200" [1] 391.3025 404.0230 392.4100 410.6170 369.4436 [1] -452.6143 -715.2115 -581.9304 -688.7000 -819.5255 [1] "Nominal linear calibrations:" [1] "co2scl = 1.027 co2off = 6.79 o2scla = -0.047 o2offa = -177.2" [1] "(dV/V)/(dXO2/XO2) = -4.461" [1] "(dV/V)/d(O2/N2) = -3.527" [1] "Finding cal and sample periods" [1] "Median Cal: 2.95 minutes" [1] "Average Cal: 2.94 minutes" [1] "Shortest Cal: 2.76 minutes" [1] "Longest Cal: 3.11 minutes" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = 0.0414" [1] "HS CO2 vs. PACAB: m = 0.0544, r^2 = 0.39" [1] "LS CO2 vs. PACAB: m = 0.0283, r^2 = 0.43" [1] "HS+LS LIH2O vs. PACAB: m = 1.62e-05" [1] "HS LIH2O vs. PACAB: m = 7.85e-05, r^2 = 0.24" [1] "LS LIH2O vs. PACAB: m = -4.61e-05, r^2 = 0.33" [1] "HS+LS CO2 vs. LIH2O: m = -370" [1] "HS CO2 vs. LIH2O: m = -206, r^2 = 0.14" [1] "LS CO2 vs. LIH2O: m = -534, r^2 = 0.99" [1] "APCO2 vs. PACAB: m = 0.0778, r^2 = 0.72" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.423" [1] "HS O2 vs. PACAB: m = -0.394, r^2 = 0.41" [1] "LS O2 vs. PACAB: m = -0.452, r^2 = 0.69" [1] "HS+LS O2 vs. LIH2O: m = 752" [1] "HS O2 vs. LIH2O: m = 1350, r^2 = 0.12" [1] "LS O2 vs. LIH2O: m = 154, r^2 = 0" [1] "HS+LS O2 vs. PAO2: m = -10.3" [1] "HS O2 vs. PAO2: m = -13.1, r^2 = 0.94" [1] "LS O2 vs. PAO2: m = -7.54, r^2 = 0.14" [1] "HS+LS O2 vs. TPBOX: m = 2.06" [1] "HS O2 vs. TPBOX: m = 1.42, r^2 = 0.2" [1] "LS O2 vs. TPBOX: m = 2.7, r^2 = 0.96" [1] "APO vs. PACAB: m = -1.48, r^2 = 0.72" [1] "APO vs. PAO2: m = -90.8, r^2 = 0.31" [1] "APO vs. TPBOX: m = 6.27, r^2 = 0.06" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 7.42, r^2 = 0.98" [1] "LS CO2 vs. LiCor Cell P: m = 8.1, r^2 = 0.98" [1] "HS CO2 vs. CO2 Vol P: m = 1.09, r^2 = 0.75" [1] "LS CO2 vs. CO2 Vol P: m = 1.07, r^2 = 0.69" [1] "HS CO2 vs. SLOPE: m = 2.93, r^2 = 0.16" [1] "LS CO2 vs. SLOPE: m = 2.32, r^2 = 0.12" [1] "HS O2 vs. O2 Vol P: m = -18.6, r^2 = 0.96" [1] "LS O2 vs. O2 Vol P: m = -16.1, r^2 = 0.74" [1] "HS O2 vs. O2 Cell T: m = 5.55, r^2 = 0.95" [1] "LS O2 vs. O2 Cell T: m = 5.35, r^2 = 0.83" [1] "HS O2 vs. CO2 Vol P: m = 3.4, r^2 = 0.04" [1] "LS O2 vs. CO2 Vol P: m = 2.76, r^2 = 0.02" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.576, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 2.17, r^2 = 0.06" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = 3.4, r^2 = 0.04" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 2.76, r^2 = 0.02" [1] "HS O2 vs. LIH2O: m = 2610, r^2 = 0.93" [1] "LS O2 vs. LIH2O: m = 1810, r^2 = 0.71" [1] "HS O2 vs. SLOPE: m = 1.35, r^2 = 0.17" [1] "LS O2 vs. SLOPE: m = -6.96, r^2 = 0.6" [1] "HS CO2 vs. Time: m = 59.375, r^2 = 1" [1] "LS CO2 vs. Time: m = 62.914, r^2 = 1" [1] "HS CO2 vs. Cylinder T: m = 14.013, r^2 = 0.32" [1] "LS CO2 vs. Cylinder T: m = 7.282, r^2 = 0.145" [1] "HS CO2 vs. Regulator T: m = 0.25, r^2 = 0.05" [1] "LS CO2 vs. Regulator T: m = 0.151, r^2 = 0.023" [1] "HS CO2 vs. Ref. Volumes T: m = 0.811, r^2 = 0.95" [1] "LS CO2 vs. Ref. Volumes T: m = 0.823, r^2 = 0.898" [1] "HS CO2 vs. Manifold T: m = 0.352, r^2 = 0.56" [1] "LS CO2 vs. Manifold T: m = 0.28, r^2 = 0.43" [1] "HS CO2 vs. Pump Box T: m = 0.226, r^2 = 0.24" [1] "LS CO2 vs. Pump Box T: m = 0.116, r^2 = 0.218" [1] "HS O2 vs. Cylinder T: m = -38.506, r^2 = 0.01" [1] "LS O2 vs. Cylinder T: m = -142.84, r^2 = 0.241" [1] "HS O2 vs. Regulator T: m = 14.266, r^2 = 0.77" [1] "LS O2 vs. Regulator T: m = 10.228, r^2 = 0.447" [1] "HS O2 vs. Ref. Volumes T: m = 9.322, r^2 = 0.64" [1] "LS O2 vs. Ref. Volumes T: m = 9.808, r^2 = 0.55" [1] "HS O2 vs. Manifold T: m = 6.467, r^2 = 0.96" [1] "LS O2 vs. Manifold T: m = 6.088, r^2 = 0.874" [1] "HS O2 vs. Pump Box T: m = 5.365, r^2 = 0.68" [1] "LS O2 vs. Pump Box T: m = 3.724, r^2 = 0.965" [1] "HS CO2 vs. WT P: m = -0.016, r^2 = 0.58" [1] "LS CO2 vs. WT P: m = -0.012, r^2 = 0.45" [1] "HS CO2 vs. SP P: m = 0.0407, r^2 = 0.35" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.162, r^2 = 0.63" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.166, r^2 = 0.63" [1] "LS CO2 vs. SP P: m = 0.028, r^2 = 0.42" [1] "LS CO2 vs. PACAB comb with SP P: m = -2.143, r^2 = 0.79" [1] "LS CO2 vs. SP P comb with PACAB: m = 2.111, r^2 = 0.79" [1] "HS CO2 vs. WT FL: m = 0.377, r^2 = 0.63" [1] "LS CO2 vs. WT FL: m = 0.341, r^2 = 0.529" [1] "HS CO2 vs. SP FL: m = 0.263, r^2 = 0.68" [1] "LS CO2 vs. SP FL: m = 0.215, r^2 = 0.539" [1] "HS O2 vs. SLPDIFF: m = -3.665, r^2 = 0.7" [1] "LS O2 vs. SLPDIFF: m = 3.325, r^2 = 0.791" [1] "HS O2 vs. WT P: m = -0.292, r^2 = 0.95" [1] "LS O2 vs. WT P: m = -0.249, r^2 = 0.878" [1] "HS O2 vs. SP P: m = -0.286, r^2 = 0.94" [1] "LS O2 vs. SP P: m = -0.256, r^2 = 0.872" [1] "HS O2 vs. WT FL: m = 6.538, r^2 = 0.96" [1] "LS O2 vs. WT FL: m = 6.238, r^2 = 0.764" [1] "HS O2 vs. SP FL: m = 4.299, r^2 = 0.93" [1] "LS O2 vs. SP FL: m = 3.975, r^2 = 0.794" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 42.48" [1] "Empirical LP O2 lag flow(s): 96.7" [1] "Empirical LP CO2 lag time(s): 40.15" [1] "Empirical LP CO2 lag flow(s): 96.7" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.8" [1] "Median all HS CO2 SD = 0.8" [1] "Median all LS CO2 SD = 0.75" [1] "Median all LT CO2 SD = 0.81" [1] "Median all WT CO2 SD = 0.76" [1] "Median all HS or LS CO2 SD = 0.8" [1] "Median all cal O2 SD = 1.97" [1] "Median all HS O2 SD = 1.86" [1] "Median all LS O2 SD = 1.7" [1] "Median all LT O2 SD = 2.48" [1] "Median all WT O2 SD = 2.05" [1] "Median all HS or LS O2 SD = 1.77" [1] "Median all cal CO2 Slope = 0" [1] "Median all HS CO2 Slope = 0" [1] "Median all LS CO2 Slope = -0.06" [1] "Median all LT CO2 Slope = -0.07" [1] "Median all WT CO2 Slope = 0.02" [1] "Median all HS or LS CO2 Slope = 0" [1] "Median all cal O2 Slope = 1" [1] "Median all HS O2 Slope = 0.62" [1] "Median all LS O2 Slope = 1" [1] "Median all LT O2 Slope = 1.41" [1] "Median all WT O2 Slope = 0.26" [1] "Median all HS or LS O2 Slope = 1" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 5.03 per meg" [1] "Initial O2 Calibration Offset = 9.44 per meg" [1] "SD of O2 Calibration (post-takeoff) = 1.03 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 10.02 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 10.02 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ORCAS inlet volumes" [1] "before any lag: 42534.89 49851.85" [1] "Time lag adjustments = 11 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 54.4 at 103.2 sccm" [1] "Median O2 delay + tlagff = 55.2 at 103.2 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 54.2 at 103.2 sccm" [1] "Median O2 delay from 3-way + tlagff = 54.9 at 103.2 sccm" [1] "after calc and ff lag: 42465.33 49786.3" [1] "2025-05-13 14:11:51 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 9 1-Hz values because of data gaps at:" [1] 25.57630 25.57631 25.57632 25.57633 25.57634 25.57635 25.57637 25.57638 [9] 25.57639 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Outputting data files" [1] "Not reporting 17 O2 values from manual exclude period 25.561085 to 25.561517" [1] "Not reporting 17 APO values from manual exclude period 25.561085 to 25.561517" [1] "Not reporting 30 O2 values from manual exclude period 25.558911 to 25.559672" [1] "Not reporting 30 APO values from manual exclude period 25.558911 to 25.559672" [1] "Not reporting 38 smoothed O2 values from manual exclude period 25.5604471911947 to 25.5608847193306" [1] "Not reporting 38 smoothed APO values from manual exclude period 25.5604471911947 to 25.5608847193306" [1] "Not reporting 66 smoothed O2 values from manual exclude period 25.5582812687322 to 25.5590486166152" [1] "Not reporting 66 smoothed APO values from manual exclude period 25.5582812687322 to 25.5590486166152" [1] "Not reporting 38 smoothed O2 values from manual exclude period 25.5604471911947 to 25.5608847193306" [1] "Not reporting 38 smoothed APO values from manual exclude period 25.5604471911947 to 25.5608847193306" [1] "Not reporting 66 smoothed O2 values from manual exclude period 25.5582812687322 to 25.5590486166152" [1] "Not reporting 66 smoothed APO values from manual exclude period 25.5582812687322 to 25.5590486166152" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 6721 records [1] 5 670 6721 [1] "done reading AO2" [1] 2016 2016 2016 2016 2016 2016 [1] 5 5 5 5 5 5 [1] 69158 69164 69174 69184 69194 69204 [1] "2016-01-05 19:12:38 UTC" "2016-01-05 19:12:44 UTC" [3] "2016-01-05 19:12:54 UTC" "2016-01-05 19:13:04 UTC" [5] "2016-01-05 19:13:14 UTC" "2016-01-05 19:13:24 UTC" [1] -301.49 -307.23 -306.56 -310.03 -312.49 -304.86 [1] 28420 [1] "Average Date / Time for slice RF05 = 2016-01-25 12:51:18.9360613822937" [1] "sum(lsel) = 391" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 140.8341 821.8078 [1] 140.8341 821.8078 [1] 178.1922 859.1659 [1] 2.921289e-02 9.999990e+05 [1] "no level flight between 275 and 375 hPa" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ORCAS RF05 APO_AO2 range = -321.3,-247.2" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 6721 records [1] 5 670 6721 [1] "done reading AO2" [1] 2016 2016 2016 2016 2016 2016 [1] 5 5 5 5 5 5 [1] 69158 69164 69174 69184 69194 69204 [1] "2016-01-05 19:12:38 UTC" "2016-01-05 19:12:44 UTC" [3] "2016-01-05 19:12:54 UTC" "2016-01-05 19:13:04 UTC" [5] "2016-01-05 19:13:14 UTC" "2016-01-05 19:13:24 UTC" [1] -616.74 -615.88 -612.65 -613.33 -605.02 -591.01 [1] 28428 [1] "Average Date / Time for slice RF05 = 2016-01-25 12:51:18.9360613822937" [1] "sum(lsel) = 391" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 140.8341 821.8078 [1] 140.8341 821.8078 [1] 178.1922 859.1659 [1] 2.921289e-02 9.999990e+05 [1] "no level flight between 275 and 375 hPa" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ORCAS RF05 O2_AO2 range = -592.8,-522.09" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 6721 records [1] 5 670 6721 [1] "done reading AO2" [1] 2016 2016 2016 2016 2016 2016 [1] 5 5 5 5 5 5 [1] 69158 69164 69174 69184 69194 69204 [1] "2016-01-05 19:12:38 UTC" "2016-01-05 19:12:44 UTC" [3] "2016-01-05 19:12:54 UTC" "2016-01-05 19:13:04 UTC" [5] "2016-01-05 19:13:14 UTC" "2016-01-05 19:13:24 UTC" [1] 410.011 408.755 408.268 407.738 405.688 404.472 [1] 32785 [1] "Average Date / Time for slice RF05 = 2016-01-25 12:52:14.6650245189667" [1] "sum(lsel) = 406" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 140.8341 821.8078 [1] 140.8341 821.8078 [1] 178.1922 859.1659 [1] 2.921289e-02 9.999990e+05 [1] "no level flight between 275 and 375 hPa" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "ORCAS RF05 CO2_AO2 range = 398.4,403.47" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"