[1] "2025-05-13 12:28:21 MDT" options [1,] "file" "110625y" [2,] "flight" "RF05" [3,] "project" "HIPPO4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "400" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "5" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "120sec" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "TRUE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "TRUE" [57,] "jogsdfact" "1" [58,] "use120sec" "TRUE" [59,] "lowerdec" "0.4" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "TRUE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "FALSE" [65,] "icarttrev" "0" [66,] "mmsrev" "0" [67,] "usespline" "TRUE" [68,] "updncorr" "adjacent" [69,] "updnave" "4pt" [1] "Reading in flight and plotting intervals" Read 9 records [1] "Reading in /scr/raf/stephens/AO2DAT/110625y.mr" Read 13177 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.22 seconds" [1] "New JOGEST = 2.22 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/110625y.hr" Read 52708 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 12:28:22 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30067 description: HS CO2 = 359 O2 = -354" [1] "position 2 cylinder OK30068 description: LS CO2 = 392.24 O2 = -933.6" [1] "position 3 cylinder OK30071 description: LT CO2 = 380.46 O2 = -460.5" [1] "position 4 cylinder OK30053 description: WT CO2 = 381.18 O2 = -812" [1] "position 5 cylinder OK30057 description: LP CO2 = 421.97 O2 = -1174.6" [1] 359.0019 392.2379 380.4640 381.1763 421.9671 [1] -354.0467 -933.6388 -460.5297 -811.9571 -1174.5777 [1] "Nominal linear calibrations:" [1] "co2scl = 0.981 co2off = 5.21 o2scla = -0.05 o2offa = -27.6" [1] "(dV/V)/(dXO2/XO2) = -4.15" [1] "(dV/V)/d(O2/N2) = -3.281" [1] "Reading in very high resolution timeseries" Read 263540 records [1] 263540 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 12:28:22 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 12:28:24 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.281" [1] "o2scaleavenew_drelVdrelP = -4.15" [1] "median(o2scalenew) = -3.279" [1] "Empirical dV/V vs dP/P relationship =-2.648, r^2 =0.005, damping =0.638" [1] "Tue May 13 12:28:24 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 2007 12853 $icochar [1] "0" "0" "177.1804" "22:07:00" "177.112339" [6] "177.009389" "177.047495" "176.957809" "176.994020" $ecochar [1] "367" "176.8958" "367" "22:08:00" "177.123076" [6] "177.011916" "177.048548" "176.962020" "176.999915" $flag [1] "all" "LP" "LP" "breath" "screensampo2" [6] "screeno2" "screeno2" "screensampo2" "screensampo2" $ico2 [1] 0.0000 0.0000 177.1804 176.9215 177.1123 177.0094 177.0475 176.9578 [9] 176.9940 $eco2 [1] 367.0000 176.8958 367.0000 176.9222 177.1231 177.0119 177.0485 176.9620 [9] 176.9999 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 2006 2006 176.8958 8.317721 0.00161880 0.00496560 0.00488400 2006 2007 2007 176.8958 8.288495 -0.00143135 0.00499315 0.00485175 2007 2008 2008 176.8958 8.305318 -0.00253540 0.00502425 0.00490150 2008 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 2006 10.5 6.00 16.00 11810.50 -1 8.318873 8.319245 2007 10.5 2.25 16.75 2961.75 1 8.290707 8.290379 2008 10.5 1.00 17.00 25.50 -1 8.307934 8.307351 vuvsigpdprcorr 2006 8.318104 2007 8.289236 2008 8.306199 [1] 0.8957741 0.8958031 0.8958328 [,1] [,2] [,3] [1,] 0.895786 -1 6 [2,] 0.895797 1 6 [3,] 0.895803 1 1 [4,] 0.895809 1 1 [5,] 0.895815 1 1 [6,] 0.895827 -1 1 [7,] 0.895833 -1 1 [8,] 0.895838 -1 1 [9,] 0.895845 -1 1 [10,] 0.895856 1 1 [11,] 0.895862 1 1 [12,] 0.895868 1 1 [13,] 0.895874 1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 12852 12852 177.1804 8.068326 -0.00103400 0.01102470 0.01097600 12852 12853 12853 177.1804 8.080204 -0.00100235 0.01103905 0.01102925 12853 12854 12854 177.1804 8.068429 -0.00109275 0.01103650 0.01105975 12854 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 12852 10.5 1.00 45.00 21350.50 1 8.072508 8.072273 12853 10.5 4.75 45.75 5346.75 -1 8.084407 8.084179 12854 10.5 6.00 46.00 25.50 1 8.072666 8.072417 vuvsigpdprcorr 12852 8.069769 12853 8.081667 12854 8.069911 [1] 1.180380 1.180405 1.180431 [,1] [,2] [,3] [1,] 1.180391 1 1 [2,] 1.180399 -1 1 [3,] 1.180405 -1 6 [4,] 1.180411 -1 6 [5,] 1.180416 -1 6 [6,] 1.180425 1 6 [7,] 1.180431 1 6 [8,] 1.180436 1 6 [9,] 1.180442 1 6 [10,] 1.180450 -1 6 [11,] 1.180456 -1 6 [12,] 1.180462 -1 6 [13,] 1.180467 -1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 2007 12853 $icochar [1] "0" "0" "177.1804" "22:07:00" "177.112339" [6] "177.009389" "177.047495" "176.957809" "176.994020" $ecochar [1] "367" "176.8958" "367" "22:08:00" "177.123076" [6] "177.011916" "177.048548" "176.962020" "176.999915" $flag [1] "all" "LP" "LP" "breath" "screensampo2" [6] "screeno2" "screeno2" "screensampo2" "screensampo2" $ico2 [1] 0.0000 0.0000 177.1804 176.9215 177.1123 177.0094 177.0475 176.9578 [9] 176.9940 $eco2 [1] 367.0000 176.8958 367.0000 176.9222 177.1231 177.0119 177.0485 176.9620 [9] 176.9999 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 2006 2006 176.8958 8.317721 0.00161880 0.00496560 0.00488400 2006 2007 2007 176.8958 8.288495 -0.00143135 0.00499315 0.00485175 2007 2008 2008 176.8958 8.305318 -0.00253540 0.00502425 0.00490150 2008 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 2006 10.5 6.00 16.00 11810.50 -1 8.318873 8.319245 2007 10.5 2.25 16.75 2961.75 1 8.290707 8.290379 2008 10.5 1.00 17.00 25.50 -1 8.307934 8.307351 vuvsigpdprcorr 2006 8.318104 2007 8.289236 2008 8.306199 [1] 0.8957741 0.8958031 0.8958328 [,1] [,2] [,3] [1,] 0.895786 -1 6 [2,] 0.895797 1 6 [3,] 0.895803 1 1 [4,] 0.895809 1 1 [5,] 0.895815 1 1 [6,] 0.895827 -1 1 [7,] 0.895833 -1 1 [8,] 0.895838 -1 1 [9,] 0.895845 -1 1 [10,] 0.895856 1 1 [11,] 0.895862 1 1 [12,] 0.895868 1 1 [13,] 0.895874 1 1 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 12852 12852 177.1804 8.068326 -0.00103400 0.01102470 0.01097600 12852 12853 12853 177.1804 8.080204 -0.00100235 0.01103905 0.01102925 12853 12854 12854 177.1804 8.068429 -0.00109275 0.01103650 0.01105975 12854 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 12852 10.5 1.00 45.00 21350.50 1 8.072508 8.072273 12853 10.5 4.75 45.75 5346.75 -1 8.084407 8.084179 12854 10.5 6.00 46.00 25.50 1 8.072666 8.072417 vuvsigpdprcorr 12852 8.069769 12853 8.081667 12854 8.069911 [1] 1.180380 1.180405 1.180431 [,1] [,2] [,3] [1,] 1.180391 1 1 [2,] 1.180399 -1 1 [3,] 1.180405 -1 6 [4,] 1.180411 -1 6 [5,] 1.180416 -1 6 [6,] 1.180425 1 6 [7,] 1.180431 1 6 [8,] 1.180436 1 6 [9,] 1.180442 1 6 [10,] 1.180450 -1 6 [11,] 1.180456 -1 6 [12,] 1.180462 -1 6 [13,] 1.180467 -1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 12:29:01 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 12:29:01 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 2 medium-rate record(s) with accumulation errors" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 121.023 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 95.236 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 95.432 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -27.863 PER MEG" [1] "Removed 3312 jogs for high vuv SD" [1] "Removing O2 and CO2 glitches" [1] 119 [1] 300 [1] 310 [1] 310 [1] 310 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 66 176.8413 2205.9577 1015401.1 -1 [2,] 67 176.8413 1872.0406 1013157.8 1 [3,] 68 176.8414 961.1147 1013243.0 1 [4,] 69 176.8414 716.2161 1013939.7 -1 [5,] 134 176.8435 604.6543 1013894.8 -1 [6,] 135 176.8435 943.1271 1013285.3 1 [7,] 136 176.8436 2072.7621 1013274.6 1 [8,] 137 176.8436 2474.7225 1015803.8 -1 [9,] 205 176.8458 2580.0746 1016220.5 -1 [10,] 206 176.8458 1924.7326 1013606.3 1 [11,] 207 176.8458 1191.9423 1014859.9 -1 [12,] 272 176.8479 1044.2348 1014987.9 -1 [13,] 273 176.8480 1314.7813 1013909.4 1 [14,] 274 176.8480 2222.6014 1013926.6 1 [15,] 275 176.8481 3190.6269 1013930.9 1 [16,] 276 176.8481 3462.0068 1017477.9 -1 [17,] 336 176.8500 3545.5466 1017722.2 -1 [18,] 337 176.8500 3390.6848 1014102.7 1 [19,] 338 176.8501 2876.0070 1014102.4 1 [20,] 339 176.8501 2689.3053 1016850.0 -1 [21,] 398 176.8518 2611.9449 1016722.6 -1 [22,] 399 176.8518 2231.0503 1014059.3 1 [23,] 400 176.8519 1096.1964 1014037.6 1 [24,] 401 176.8519 710.2983 1014761.7 -1 [25,] 459 176.8535 598.8242 1014587.4 -1 [26,] 460 176.8536 1113.5066 1013976.5 1 [27,] 461 176.8536 2657.9605 1013985.0 1 [28,] 462 176.8537 3218.0025 1017306.0 -1 [29,] 704 176.8604 3539.8883 1019012.3 -1 [30,] 705 176.8605 3025.2047 1015395.8 1 [31,] 706 176.8605 1466.5389 1015383.6 1 [32,] 707 176.8605 889.0813 1016299.8 -1 [33,] 783 176.8626 609.0074 1016728.5 -1 [34,] 784 176.8626 983.5729 1016114.8 1 [35,] 785 176.8626 2103.9336 1016158.3 1 [36,] 786 176.8627 2498.0411 1018738.6 -1 [37,] 932 176.8667 2141.2629 1020434.8 -1 [38,] 933 176.8667 2404.6587 1018243.8 1 [39,] 934 176.8668 3211.3151 1018256.4 1 [40,] 935 176.8668 3475.9954 1021830.6 -1 [41,] 1076 176.8710 3546.9488 1021842.6 -1 [42,] 1077 176.8710 3390.8926 1018186.0 1 [43,] 1078 176.8711 2878.4779 1018180.0 1 [44,] 1079 176.8711 2693.4027 1020943.0 -1 [45,] 1149 176.8732 2622.2256 1020504.1 -1 [46,] 1150 176.8733 2311.2908 1017792.5 1 [47,] 1151 176.8733 1128.6614 1017805.4 1 [48,] 1152 176.8734 772.1393 1018581.6 -1 [49,] 1224 176.8758 1000.8239 1018380.8 -1 [50,] 1296 176.8780 1009.7096 1017953.4 -1 [51,] 1297 176.8780 1263.6081 1016900.8 1 [52,] 1298 176.8781 2188.1565 1016893.6 1 [53,] 1299 176.8781 3166.4601 1016885.6 1 [54,] 1300 176.8782 3494.7713 1020487.1 -1 [55,] 1804 176.8955 3556.0573 1023000.4 -1 [56,] 1805 176.8956 3491.8509 1019316.7 1 [57,] 1806 176.8960 1854.5330 1020777.6 -1 [58,] 1807 176.8960 1886.6692 1018898.0 1 [59,] 2047 176.9056 1371.8332 1018333.4 -1 [60,] 2051 176.9057 1352.9025 1018223.1 -1 [61,] 2052 176.9058 1021.6187 1016814.9 1 [62,] 2053 176.9058 718.8443 1017519.1 -1 [63,] 2115 176.9076 626.9441 1016289.8 -1 [64,] 2116 176.9076 864.3311 1015638.3 1 [65,] 2117 176.9076 1589.1989 1015597.6 1 [66,] 2118 176.9077 2276.5819 1015578.0 1 [67,] 2119 176.9077 2490.6329 1018123.7 -1 [68,] 2183 176.9096 2604.4486 1016984.3 -1 [69,] 2184 176.9096 2385.7338 1014290.3 1 [70,] 2185 176.9097 1688.1399 1014236.5 1 [71,] 2186 176.9097 1446.5320 1015702.3 -1 [72,] 2968 176.9355 1354.5042 1004363.8 1 [73,] 2969 176.9356 1377.7709 1005683.8 -1 [74,] 2970 176.9357 1387.5863 1005654.6 -1 [75,] 2971 176.9357 1397.3010 1005627.8 -1 [76,] 2972 176.9358 1389.0097 1005553.2 -1 [77,] 2973 176.9359 1393.3124 1005535.6 -1 [78,] 2974 176.9360 1387.0619 1005497.8 -1 [79,] 2975 176.9360 1382.6716 1005460.2 -1 [80,] 2976 176.9362 1384.4203 1003963.6 1 [81,] 3063 176.9404 1324.6915 1002864.4 -1 [82,] 3065 176.9404 1320.3649 1002841.2 -1 [83,] 3066 176.9405 1551.8776 1001499.0 1 [84,] 3067 176.9405 2312.2619 1001435.2 1 [85,] 3068 176.9406 2559.0999 1004009.8 -1 [86,] 3122 176.9425 2596.6150 1003365.4 -1 [87,] 3123 176.9425 2233.1589 1000739.3 1 [88,] 3124 176.9426 1157.3938 1000729.0 1 [89,] 3125 176.9426 770.3557 1001476.4 -1 [90,] 3184 176.9444 598.0190 1000695.6 -1 [91,] 3185 176.9444 720.1300 1000091.2 1 [92,] 3186 176.9445 1080.7411 1000110.0 1 [93,] 3187 176.9445 1223.5701 1001361.5 -1 [94,] 3719 176.9639 1265.7893 992900.7 1 [95,] 3720 176.9639 1264.2839 994150.5 -1 [96,] 3721 176.9640 1258.8942 994112.4 -1 [97,] 3722 176.9640 1274.6037 994098.5 -1 [98,] 3723 176.9641 1270.9819 994062.9 -1 [99,] 3724 176.9641 1278.6211 994034.5 -1 [100,] 3725 176.9642 1281.3339 994004.6 -1 [101,] 3726 176.9642 1279.3745 993967.6 -1 [102,] 3727 176.9643 1279.8767 993936.9 -1 [103,] 3728 176.9643 1280.8221 993903.8 -1 [104,] 3729 176.9644 1279.9506 993869.2 -1 [105,] 3730 176.9644 1304.7105 993860.3 -1 [106,] 3731 176.9645 1291.4719 993811.7 -1 [107,] 3732 176.9645 1275.1967 993763.0 -1 [108,] 3733 176.9646 1263.3495 993719.9 -1 [109,] 3734 176.9646 1258.7159 993682.3 -1 [110,] 3735 176.9647 1250.7166 993641.2 -1 [111,] 3736 176.9648 1250.3008 993577.4 -1 [112,] 3737 176.9648 1243.8358 993536.8 -1 [113,] 3738 176.9649 1235.8714 993495.9 -1 [114,] 3739 176.9649 1227.3184 993450.5 -1 [115,] 3740 176.9650 1241.2634 993429.8 -1 [116,] 3741 176.9650 1234.7706 993390.5 -1 [117,] 3742 176.9651 1243.6234 993366.0 -1 [118,] 3743 176.9651 1228.2432 993313.6 -1 [119,] 3744 176.9652 1257.4058 993274.0 -1 [120,] 3745 176.9653 1252.8275 993202.1 -1 [121,] 3746 176.9654 1252.0916 993166.9 -1 [122,] 3747 176.9654 1231.4806 993114.3 -1 [123,] 3748 176.9655 1223.4195 993036.0 -1 [124,] 3749 176.9656 1226.9723 993012.4 -1 [125,] 3750 176.9656 1210.0756 992957.2 -1 [126,] 3751 176.9657 1210.8524 992934.8 -1 [127,] 3752 176.9658 1206.2859 992897.6 -1 [128,] 3753 176.9658 1242.5214 992895.6 -1 [129,] 3754 176.9659 1246.7862 992836.4 -1 [130,] 3755 176.9661 1284.3891 992775.9 -1 [131,] 3756 176.9661 1281.4165 991464.9 1 [132,] 3975 176.9752 1281.5356 990820.8 -1 [133,] 3976 176.9752 1112.6624 989558.4 1 [134,] 3977 176.9752 752.1596 989558.8 1 [135,] 3978 176.9753 640.1954 990184.5 -1 [136,] 4049 176.9773 571.2071 991581.2 -1 [137,] 4050 176.9773 927.5550 991046.7 1 [138,] 4051 176.9773 2003.8270 991105.0 1 [139,] 4052 176.9774 2405.2068 993544.3 -1 [140,] 4121 176.9793 2574.6243 995823.9 -1 [141,] 4122 176.9794 2318.1459 993264.9 1 [142,] 4123 176.9794 1532.2575 993320.5 1 [143,] 4124 176.9794 1252.8370 994581.5 -1 [144,] 4195 176.9815 993.8400 996041.5 -1 [145,] 4196 176.9815 1211.7270 995063.3 1 [146,] 4197 176.9816 1852.2760 995110.5 1 [147,] 4198 176.9816 2063.1634 997197.0 -1 [148,] 4268 176.9839 2047.4855 998652.0 -1 [149,] 4269 176.9839 1965.3444 996603.1 1 [150,] 4270 176.9840 1679.4748 996632.6 1 [151,] 4271 176.9840 1336.7040 996710.6 1 [152,] 4272 176.9840 1243.4713 997984.4 -1 [153,] 4700 176.9999 1283.8969 995935.2 1 [154,] 4701 177.0002 1257.7715 997098.4 -1 [155,] 4702 177.0002 1250.0788 997061.7 -1 [156,] 4703 177.0003 1250.9409 997037.8 -1 [157,] 4704 177.0003 1257.5608 997021.6 -1 [158,] 4705 177.0004 1250.5611 996988.9 -1 [159,] 4706 177.0005 1272.2811 996949.4 -1 [160,] 4707 177.0005 1249.2385 996891.8 -1 [161,] 4708 177.0006 1292.5641 996889.8 -1 [162,] 4709 177.0006 1288.9874 996851.3 -1 [163,] 4710 177.0007 1286.1008 996806.8 -1 [164,] 4711 177.0007 1306.3246 995489.5 1 [165,] 4735 177.0018 1286.4249 994885.7 1 [166,] 4736 177.0018 1286.0436 996167.7 -1 [167,] 4737 177.0019 1275.2852 996105.5 -1 [168,] 4738 177.0020 1298.7547 996105.8 -1 [169,] 4739 177.0020 1284.3208 996067.4 -1 [170,] 4740 177.0021 1281.2552 996041.1 -1 [171,] 4741 177.0021 1277.9765 996013.2 -1 [172,] 4742 177.0022 1267.5737 995978.3 -1 [173,] 4743 177.0023 1287.0201 995947.0 -1 [174,] 4744 177.0024 1289.7512 995921.8 -1 [175,] 4745 177.0024 1297.9012 995907.6 -1 [176,] 4746 177.0026 1296.0668 995828.5 -1 [177,] 4747 177.0026 1297.6177 995808.5 -1 [178,] 4748 177.0027 1343.4499 995828.2 -1 [179,] 4749 177.0027 1319.3299 995780.7 -1 [180,] 4750 177.0028 1315.8157 995754.9 -1 [181,] 4751 177.0028 1314.4277 995734.5 -1 [182,] 4752 177.0029 1319.6087 995714.5 -1 [183,] 4753 177.0029 1302.0012 995673.0 -1 [184,] 4754 177.0030 1302.7075 995653.6 -1 [185,] 4755 177.0030 1310.9478 995635.5 -1 [186,] 4756 177.0031 1307.2660 995615.9 -1 [187,] 4757 177.0031 1289.8310 995577.6 -1 [188,] 4758 177.0032 1292.3177 995560.2 -1 [189,] 4759 177.0032 1289.5226 994248.2 1 [190,] 4955 177.0099 1244.3640 997232.2 -1 [191,] 4959 177.0100 1219.3931 997299.1 -1 [192,] 4960 177.0101 1467.1451 996093.8 1 [193,] 4961 177.0101 2193.6410 996101.9 1 [194,] 4962 177.0101 2444.2368 998567.6 -1 [195,] 5036 177.0122 2539.3254 1000237.5 -1 [196,] 5037 177.0122 2263.4557 997647.8 1 [197,] 5038 177.0123 1198.4650 997653.3 1 [198,] 5039 177.0123 795.1900 998449.3 -1 [199,] 5101 177.0144 605.6594 999255.0 -1 [200,] 5102 177.0144 748.5073 998657.9 1 [201,] 5103 177.0145 1172.9051 998715.5 1 [202,] 5104 177.0145 1282.2786 1000048.9 -1 [203,] 5917 177.0447 1316.3575 1002310.8 -1 [204,] 5918 177.0447 1321.4056 1002306.9 -1 [205,] 5919 177.0448 687.5061 1001643.0 -1 [206,] 5973 177.0468 585.6612 1001211.0 -1 [207,] 5974 177.0469 939.8679 1000627.8 1 [208,] 5975 177.0469 2022.6365 1000622.0 1 [209,] 5976 177.0469 2414.7052 1003060.9 -1 [210,] 6028 177.0489 2599.2359 1002656.4 -1 [211,] 6029 177.0489 2393.8709 1000039.8 1 [212,] 6030 177.0490 1709.5164 1000044.3 1 [213,] 6031 177.0490 1463.5867 1001516.4 -1 [214,] 6797 177.0794 1328.4746 1001285.1 -1 [215,] 6801 177.0795 1285.7075 1001263.1 -1 [216,] 6802 177.0795 1528.9956 999951.0 1 [217,] 6803 177.0796 2282.4858 999928.3 1 [218,] 6804 177.0796 2534.1037 1002481.4 -1 [219,] 6861 177.0816 2604.5582 1002658.7 -1 [220,] 6862 177.0816 2245.7325 1000041.2 1 [221,] 6863 177.0817 1100.0451 1000041.1 1 [222,] 6864 177.0817 721.0345 1000747.7 -1 [223,] 6925 177.0837 596.9581 1000931.0 -1 [224,] 6926 177.0837 675.6749 1000353.7 1 [225,] 6927 177.0837 984.1293 1000340.4 1 [226,] 6928 177.0838 1083.1448 1001435.1 -1 [227,] 7128 177.0915 1271.7846 999619.8 1 [228,] 7129 177.0915 1251.7005 1000887.6 -1 [229,] 7130 177.0915 1234.7883 1000863.5 -1 [230,] 7131 177.0916 1208.7621 1000832.4 -1 [231,] 7132 177.0916 1199.8421 1000805.8 -1 [232,] 7133 177.0917 1178.9229 1000772.4 -1 [233,] 7134 177.0917 1170.1454 1000746.1 -1 [234,] 7135 177.0918 1154.0726 1000703.8 -1 [235,] 7136 177.0918 1142.8586 1000661.9 -1 [236,] 7137 177.0919 1138.1050 1000623.8 -1 [237,] 7138 177.0920 1142.6398 1000602.4 -1 [238,] 7139 177.0920 1161.0060 1000579.1 -1 [239,] 7140 177.0921 1139.6008 1000518.7 -1 [240,] 7141 177.0921 1137.4034 1000479.2 -1 [241,] 7142 177.0922 1152.1757 1000453.0 -1 [242,] 7143 177.0922 1158.4586 1000418.0 -1 [243,] 7144 177.0923 1183.8900 1000395.5 -1 [244,] 7145 177.0923 1185.6726 1000346.8 -1 [245,] 7146 177.0924 1229.3896 1000341.6 -1 [246,] 7147 177.0924 1247.2552 1000312.2 -1 [247,] 7148 177.0925 1256.6688 1000271.3 -1 [248,] 7149 177.0925 1266.6248 1000231.5 -1 [249,] 7150 177.0927 1297.6299 1000125.9 -1 [250,] 7151 177.0927 1318.0641 1000099.8 -1 [251,] 7152 177.0928 1331.7759 1000025.8 -1 [252,] 7153 177.0929 1357.4494 1000008.6 -1 [253,] 7154 177.0929 1347.9247 999965.9 -1 [254,] 7155 177.0930 1348.3631 999927.7 -1 [255,] 7156 177.0930 1369.5041 999917.0 -1 [256,] 7157 177.0931 1354.9700 998487.0 1 [257,] 7678 177.1141 1301.5060 993785.9 -1 [258,] 7682 177.1142 1221.8226 993774.5 -1 [259,] 7683 177.1142 1085.4991 992541.3 1 [260,] 7684 177.1143 676.9826 992481.8 1 [261,] 7685 177.1143 526.0374 992968.0 -1 [262,] 7758 177.1163 474.1901 992119.3 -1 [263,] 7759 177.1163 860.2493 991647.1 1 [264,] 7760 177.1164 1994.5611 991651.8 1 [265,] 7761 177.1164 2381.3126 994012.1 -1 [266,] 7836 177.1185 2036.4168 992833.4 -1 [267,] 7910 177.1205 2114.9533 992251.6 -1 [268,] 7911 177.1205 1900.7053 990151.8 1 [269,] 7912 177.1206 1380.5655 990194.6 1 [270,] 7913 177.1206 1253.9851 991436.0 -1 [271,] 8590 177.1489 1276.2158 984615.9 -1 [272,] 8594 177.1490 1276.5875 984598.6 -1 [273,] 8595 177.1490 1516.5413 983321.8 1 [274,] 8596 177.1490 2243.2136 983282.6 1 [275,] 8597 177.1491 2484.4054 985721.1 -1 [276,] 8666 177.1511 2531.4739 985511.6 -1 [277,] 8667 177.1511 2146.4650 983014.2 1 [278,] 8668 177.1511 1023.7126 983005.0 1 [279,] 8669 177.1512 638.6103 983613.3 -1 [280,] 8728 177.1531 530.5892 983576.3 -1 [281,] 8729 177.1532 685.3027 983075.1 1 [282,] 8730 177.1532 1106.8825 983125.1 1 [283,] 8731 177.1532 1251.7216 984389.9 -1 [284,] 9530 177.1792 1450.6309 992480.5 -1 [285,] 9531 177.1793 1507.7122 991063.2 1 [286,] 9532 177.1793 1241.0040 991626.0 1 [287,] 9533 177.1793 1302.3527 993016.0 -1 [288,] 9571 177.1804 1463.5193 993328.8 -1 [289,] 9573 177.1805 1475.4624 993348.3 -1 [290,] 9574 177.1805 1618.6739 991863.9 1 [291,] 9575 177.1805 2163.9993 991872.7 1 [292,] 9576 177.1806 3442.7733 991826.0 1 [293,] 9577 177.1807 3702.6194 995529.4 -1 [294,] 9651 177.1831 3486.2268 996377.4 -1 [295,] 9652 177.1831 2927.0071 992910.4 1 [296,] 9653 177.1832 1245.6767 992894.5 1 [297,] 9654 177.1832 623.3976 993538.7 -1 [298,] 9717 177.1853 514.5237 994291.6 -1 [299,] 9718 177.1853 711.9050 993787.3 1 [300,] 9719 177.1854 1460.9055 993817.2 1 [301,] 9720 177.1855 2271.5137 993837.4 1 [302,] 9721 177.1855 2504.1112 996347.3 -1 [303,] 9786 177.1875 2542.0293 996817.2 -1 [304,] 9787 177.1876 2275.7115 994278.0 1 [305,] 9788 177.1876 1488.8211 994290.5 1 [306,] 9789 177.1876 1130.7392 995420.8 -1 [307,] 9854 177.1897 964.5982 995532.5 -1 [308,] 9855 177.1897 1323.6960 994575.7 1 [309,] 9856 177.1898 2195.0826 994597.3 1 [310,] 9857 177.1898 2474.4088 997083.7 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 5627 177.0342 9.780965e+09 [2,] 7025 177.0874 2.942480e+02 [3,] 9192 177.1690 2.958120e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 121.023 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 64.205 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 64.062 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -27.863 PER MEG" [1] 177.1123 177.1231 [1] "Screened 131 sample O2 values from screensampo2 period 177.112339 to 177.123076" [1] 177.0094 177.0119 [1] "Screened 88 O2 values from screeno2 period 177.009389 to 177.011916" [1] 177.0475 177.0485 [1] "Screened 22 O2 values from screeno2 period 177.047495 to 177.048548" [1] 176.9578 176.9620 [1] "Screened 126 sample O2 values from screensampo2 period 176.957809 to 176.96202" [1] 176.9940 176.9999 [1] "Screened 153 sample O2 values from screensampo2 period 176.99402 to 176.999915" [1] 359.0019 392.2379 380.4640 381.1763 421.9671 [1] -354.0467 -933.6388 -460.5297 -811.9571 -1174.5777 [1] "Nominal linear calibrations:" [1] "co2scl = 0.982 co2off = 4.97 o2scla = -0.051 o2offa = -27.6" [1] "(dV/V)/(dXO2/XO2) = -4.14" [1] "(dV/V)/d(O2/N2) = -3.273" [1] "Finding cal and sample periods" [1] "Median Cal: 2.98 minutes" [1] "Average Cal: 2.94 minutes" [1] "Shortest Cal: 0.57 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 3 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 23" [1] "at: 48" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00278" [1] "HS CO2 vs. PACAB: m = -0.00394, r^2 = 0.06" [1] "LS CO2 vs. PACAB: m = -0.00162, r^2 = 0.03" [1] "HS+LS LIH2O vs. PACAB: m = -3.46e-05" [1] "HS LIH2O vs. PACAB: m = -1.33e-05, r^2 = 0" [1] "LS LIH2O vs. PACAB: m = -5.59e-05, r^2 = 0.1" [1] "HS+LS CO2 vs. LIH2O: m = 12.8" [1] "HS CO2 vs. LIH2O: m = -3.22, r^2 = 0" [1] "LS CO2 vs. LIH2O: m = 28.9, r^2 = 0.35" [1] "APCO2 vs. PACAB: m = 0.00657, r^2 = 0.01" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.245" [1] "HS O2 vs. PACAB: m = -0.0526, r^2 = 0" [1] "LS O2 vs. PACAB: m = -0.438, r^2 = 0.1" [1] "HS+LS O2 vs. LIH2O: m = 384" [1] "HS O2 vs. LIH2O: m = 82.2, r^2 = 0" [1] "LS O2 vs. LIH2O: m = 685, r^2 = 0.01" [1] "HS+LS O2 vs. PAO2: m = -21.9" [1] "HS O2 vs. PAO2: m = -20.3, r^2 = 0.05" [1] "LS O2 vs. PAO2: m = -23.6, r^2 = 0.06" [1] "HS+LS O2 vs. TPBOX: m = -1.65" [1] "HS O2 vs. TPBOX: m = -2.02, r^2 = 0.03" [1] "LS O2 vs. TPBOX: m = -1.28, r^2 = 0.02" [1] "APO vs. PACAB: m = -0.111, r^2 = 0.01" [1] "APO vs. PAO2: m = -43.3, r^2 = 0.27" [1] "APO vs. TPBOX: m = 8.59, r^2 = 0.17" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -1.02, r^2 = 0.05" [1] "LS CO2 vs. LiCor Cell P: m = 0.154, r^2 = 0" [1] "HS CO2 vs. CO2 Vol P: m = 0.0251, r^2 = 0" [1] "LS CO2 vs. CO2 Vol P: m = 0.0738, r^2 = 0.05" [1] "HS CO2 vs. SLOPE: m = -0.193, r^2 = 0.13" [1] "LS CO2 vs. SLOPE: m = 0.000853, r^2 = 0" [1] "HS O2 vs. O2 Vol P: m = -21.2, r^2 = 0.03" [1] "LS O2 vs. O2 Vol P: m = -15, r^2 = 0.01" [1] "HS O2 vs. O2 Cell T: m = 14.6, r^2 = 0.04" [1] "LS O2 vs. O2 Cell T: m = 1.75, r^2 = 0" [1] "HS O2 vs. CO2 Vol P: m = -16.6, r^2 = 0.03" [1] "LS O2 vs. CO2 Vol P: m = -15, r^2 = 0.02" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -3.4, r^2 = 0.02" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -0.279, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -16.6, r^2 = 0.03" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -15, r^2 = 0.02" [1] "HS O2 vs. LIH2O: m = 861, r^2 = 0.01" [1] "LS O2 vs. LIH2O: m = 1770, r^2 = 0.02" [1] "HS O2 vs. SLOPE: m = -0.24, r^2 = 0.01" [1] "LS O2 vs. SLOPE: m = -2.28, r^2 = 0.22" [1] "HS CO2 vs. Time: m = 16.743, r^2 = 0.93" [1] "LS CO2 vs. Time: m = 17.069, r^2 = 0.93" [1] "HS CO2 vs. Cylinder T: m = -0.486, r^2 = 0.27" [1] "LS CO2 vs. Cylinder T: m = -0.051, r^2 = 0.009" [1] "HS CO2 vs. Regulator T: m = -0.161, r^2 = 0.13" [1] "LS CO2 vs. Regulator T: m = -0.066, r^2 = 0.056" [1] "HS CO2 vs. Ref. Volumes T: m = -0.228, r^2 = 0.12" [1] "LS CO2 vs. Ref. Volumes T: m = -0.028, r^2 = 0.006" [1] "HS CO2 vs. Manifold T: m = -0.155, r^2 = 0.2" [1] "LS CO2 vs. Manifold T: m = -0.065, r^2 = 0.094" [1] "HS CO2 vs. Pump Box T: m = -0.008, r^2 = 0.01" [1] "LS CO2 vs. Pump Box T: m = -0.003, r^2 = 0.003" [1] "HS O2 vs. Cylinder T: m = 13.316, r^2 = 0.01" [1] "LS O2 vs. Cylinder T: m = -10, r^2 = 0.004" [1] "HS O2 vs. Regulator T: m = 0.4, r^2 = 0" [1] "LS O2 vs. Regulator T: m = -4.004, r^2 = 0.002" [1] "HS O2 vs. Ref. Volumes T: m = -6.08, r^2 = 0" [1] "LS O2 vs. Ref. Volumes T: m = -14.826, r^2 = 0.017" [1] "HS O2 vs. Manifold T: m = 12.484, r^2 = 0.04" [1] "LS O2 vs. Manifold T: m = 3.15, r^2 = 0.002" [1] "HS O2 vs. Pump Box T: m = -2.244, r^2 = 0.02" [1] "LS O2 vs. Pump Box T: m = -1.438, r^2 = 0.008" [1] "HS CO2 vs. WT P: m = -0.001, r^2 = 0.01" [1] "LS CO2 vs. WT P: m = -0.003, r^2 = 0.124" [1] "HS CO2 vs. SP P: m = -0.00111, r^2 = 0.01" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.047, r^2 = 0.39" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.052, r^2 = 0.39" [1] "LS CO2 vs. SP P: m = -0.00269, r^2 = 0.14" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.004, r^2 = 0.13" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.007, r^2 = 0.13" [1] "HS CO2 vs. WT FL: m = -0.09, r^2 = 0.15" [1] "LS CO2 vs. WT FL: m = -0.044, r^2 = 0.088" [1] "HS CO2 vs. SP FL: m = -0.012, r^2 = 0" [1] "LS CO2 vs. SP FL: m = 0.011, r^2 = 0.006" [1] "HS O2 vs. SLPDIFF: m = 0.216, r^2 = 0.01" [1] "LS O2 vs. SLPDIFF: m = -1.642, r^2 = 0.159" [1] "HS O2 vs. WT P: m = 0.686, r^2 = 0.09" [1] "LS O2 vs. WT P: m = 0.166, r^2 = 0.006" [1] "HS O2 vs. SP P: m = 0.614, r^2 = 0.05" [1] "LS O2 vs. SP P: m = 0.066, r^2 = 0.001" [1] "HS O2 vs. WT FL: m = -1.125, r^2 = 0" [1] "LS O2 vs. WT FL: m = -4.831, r^2 = 0.012" [1] "HS O2 vs. SP FL: m = -16.13, r^2 = 0.12" [1] "LS O2 vs. SP FL: m = -5.109, r^2 = 0.015" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): -22.2, 22.12" [1] "Empirical LP O2 lag flow(s): 103.8, 98" [1] "Empirical LP CO2 lag time(s): 18.14, 22.12" [1] "Empirical LP CO2 lag flow(s): 103.8, 98" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.71" [1] "Median all HS CO2 SD = 0.7" [1] "Median all LS CO2 SD = 0.71" [1] "Median all LT CO2 SD = 0.69" [1] "Median all WT CO2 SD = 0.68" [1] "Median all HS or LS CO2 SD = 0.71" [1] "Median all cal O2 SD = 4.21" [1] "Median all HS O2 SD = 3.71" [1] "Median all LS O2 SD = 3.38" [1] "Median all LT O2 SD = 4.21" [1] "Median all WT O2 SD = 9.34" [1] "Median all HS or LS O2 SD = 3.52" [1] "Median all cal CO2 Slope = 0.03" [1] "Median all HS CO2 Slope = 0.01" [1] "Median all LS CO2 Slope = 0.04" [1] "Median all LT CO2 Slope = 0.15" [1] "Median all WT CO2 Slope = -0.09" [1] "Median all HS or LS CO2 Slope = 0.01" [1] "Median all cal O2 Slope = 0.97" [1] "Median all HS O2 Slope = 0.54" [1] "Median all LS O2 Slope = 1.43" [1] "Median all LT O2 Slope = 1.72" [1] "Median all WT O2 Slope = -3.57" [1] "Median all HS or LS O2 Slope = 1" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 13.43 per meg" [1] "Initial O2 Calibration Offset = -7.47 per meg" [1] "SD of O2 Calibration (post-takeoff) = 14.95 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -8.92 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -1.99 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO4-5 inlet volumes" [1] "before any lag: 72487.79 102816.43" [1] "Time lag adjustments = 5 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 40.5 at 101.7 sccm" [1] "Median O2 delay + tlagff = 41.3 at 101.7 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 37.8 at 101.7 sccm" [1] "Median O2 delay from 3-way + tlagff = 38.6 at 101.7 sccm" [1] "after calc and ff lag: 72446.73 102773.33" [1] "2025-05-13 12:29:33 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 142 1-Hz values because of data gaps at:" [1] 176.8983 176.9007 176.9013 176.9016 176.9016 176.9016 176.9016 176.9016 [9] 176.9130 176.9130 176.9130 176.9130 176.9130 176.9233 176.9357 176.9357 [17] 176.9357 176.9363 176.9465 176.9465 176.9466 176.9494 176.9512 176.9512 [25] 176.9512 176.9565 176.9655 176.9655 176.9655 176.9655 176.9678 176.9690 [33] 176.9690 176.9690 176.9690 176.9690 176.9690 176.9690 176.9690 176.9691 [41] 176.9691 176.9691 176.9691 176.9867 176.9867 176.9867 176.9867 176.9867 [49] 176.9868 176.9868 176.9913 176.9952 176.9953 176.9995 176.9996 176.9996 [57] 176.9996 176.9996 176.9996 176.9996 176.9996 176.9996 176.9997 177.0009 [65] 177.0009 177.0009 177.0009 177.0020 177.0020 177.0020 177.0248 177.0248 [73] 177.0248 177.0248 177.0259 177.0260 177.0260 177.0271 177.0399 177.0399 [81] 177.0453 177.0453 177.0453 177.0477 177.0477 177.0477 177.0495 177.0585 [89] 177.0586 177.0586 177.0586 177.0650 177.0666 177.0667 177.0667 177.0742 [97] 177.0743 177.0743 177.0743 177.0743 177.0743 177.0743 177.0754 177.0921 [105] 177.0921 177.0921 177.0934 177.0934 177.0934 177.1109 177.1109 177.1109 [113] 177.1209 177.1209 177.1209 177.1266 177.1266 177.1298 177.1298 177.1298 [121] 177.1306 177.1306 177.1306 177.1306 177.1307 177.1321 177.1321 177.1321 [129] 177.1324 177.1347 177.1394 177.1394 177.1414 177.1463 177.1463 177.1463 [137] 177.1464 177.1518 177.1519 177.1519 177.1544 177.1729 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] NA NA NA -11.84631316 -4.24744181 [6] -9.94029653 -32.61566581 -47.26832621 -21.93605706 -18.72069520 [11] -3.13400160 3.10657311 2.03270934 10.09097689 17.52471353 [16] -2.25157455 -15.20568778 -16.40871421 -4.24165093 7.45108909 [21] 12.73030787 12.73030787 21.01001776 18.16907316 18.16907316 [26] 10.77151785 6.88140901 5.72354241 5.18459165 8.48496229 [31] 11.92597722 12.63250492 -24.97599505 -27.60332748 -15.60758101 [36] -9.75790703 -8.03583420 -6.17844322 -3.83007244 -2.86057929 [41] 0.99601708 -10.52327797 -21.71010551 -21.28720592 1.74310253 [46] 1.77424359 -1.75114628 -21.45522138 -34.00503919 -33.03633439 [51] -37.00680560 -37.00680560 -31.81383571 -9.81354321 -9.90172969 [56] -9.90172969 -26.09751750 -20.65298380 -20.65298380 -20.65298380 [61] 3.96480696 19.89777906 6.65006383 0.37959457 -5.65898262 [66] -5.81525593 -7.48340958 -11.88548147 -12.60678492 -13.18590318 [71] -30.87195965 -21.46154435 -24.00336098 -8.70660482 0.80659173 [76] 0.80659173 1.65886488 0.09822187 -2.65546539 -32.10951162 [81] -32.10951162 -26.47696941 -10.26145287 -10.26145287 -16.51587001 [86] -21.96034127 -25.44449168 -27.76179447 -25.39568679 -26.56350676 [91] -28.16585920 -28.72982522 -23.98522878 -12.92191863 -10.20221870 [96] -13.09545573 -12.03339852 -8.16430723 -10.79922387 -13.88223517 [101] -13.88223517 -11.63970359 -11.63970359 -12.09820210 -13.80487571 [106] -23.85839251 -23.85839251 -23.85839251 -2.23215167 13.69284098 [111] 20.57516036 20.56314866 21.28475604 21.28349479 -23.30479210 [116] -22.62808551 -18.55143633 3.61753287 3.87088370 5.97566468 [121] 5.97566468 5.97566468 0.62055389 -1.60630901 -1.60630901 [126] -1.01892043 -0.92615454 -8.00262179 -9.30135320 -35.55753173 [131] -26.98018867 -25.93556957 -0.04958567 15.14659877 9.28360992 [136] 8.48540770 -8.60260788 -8.60260788 0.77401250 -3.58200267 [141] -3.58200267 -1.90090010 13.51961784 15.56588623 15.44078665 [146] 6.79061291 5.88909969 6.21937855 9.16202291 9.16202291 [151] -7.76071771 -6.88461885 12.68787728 12.64789985 0.51783230 [156] -14.50723792 -16.59692792 -4.38825631 4.49617643 4.49617643 [161] 3.70192347 2.47431019 8.50790443 7.78584897 23.91016343 [166] 23.91016343 23.91016343 -16.18261944 -16.18261944 -14.06107645 [171] -7.23764523 5.00031227 5.00031227 5.00031227 6.12981685 [176] -3.96993260 -7.77635799 -8.28281109 1.72507761 -8.23099873 [181] -9.61723513 -9.61723513 -5.61935815 -7.86139226 0.62832611 [186] 0.62832611 -23.90618739 -23.90618739 -23.70162175 -5.00366769 [191] -5.00366769 -6.41756435 -6.41756435 -7.40792619 -16.56260399 [196] -19.70463224 -15.05937565 -9.59682022 -9.59682022 -9.36418929 [201] -5.09536864 -0.23528449 1.33691003 1.76737418 1.24098076 [206] -1.29817214 -1.29817214 -1.93013111 3.95904059 3.69949602 [211] 3.40755801 3.25253757 3.07700780 1.81460180 -3.73660908 [216] -5.95856959 -5.95856959 -6.16548949 -12.68168423 NA [221] NA NA NA NA NA [226] NA NA NA NA NA [231] NA NA NA NA NA [236] NA NA [1] 25.66363 32.01762 35.70224 38.35295 41.29234 43.69672 46.59615 [8] 49.33331 51.91620 54.94907 58.17434 61.64212 66.64724 70.88945 [15] 75.47171 80.34750 88.77660 93.16264 98.09063 101.38733 104.09395 [22] 107.62438 109.97787 111.54484 113.64518 115.23679 116.58573 117.94371 [29] 119.35373 121.21237 123.15023 125.75925 141.34819 144.96506 148.73874 [36] 152.21410 156.23831 159.76772 163.51200 167.34172 171.10452 174.75189 [43] 178.73400 187.48983 191.27636 194.82135 198.60091 202.08502 209.63751 [50] 212.39227 214.10576 215.68493 217.68900 219.77255 222.10413 223.96977 [57] 225.78978 227.45730 229.32091 231.28039 233.66969 237.35256 239.42724 [64] 247.74278 250.99504 253.41360 255.48656 258.97484 261.37148 263.47092 [71] 267.36682 270.81229 277.89848 283.89744 285.73532 289.37113 293.18894 [78] 295.27867 297.29576 300.82915 302.86437 304.76361 306.65161 308.80278 [85] 310.67504 315.75372 317.67401 319.25308 321.12768 322.73843 324.61911 [92] 326.38533 328.17853 331.42349 333.17147 334.83053 336.48237 338.13244 [99] 340.01998 341.61042 343.60393 346.90992 348.58680 349.98214 351.51075 [106] 353.23792 354.85958 356.31447 359.61000 362.91365 365.98354 369.24784 [113] 372.09485 375.48364 378.50480 385.37445 388.19687 391.41521 394.51441 [120] 397.65899 399.17704 400.63082 402.31044 403.69587 405.28914 406.93249 [127] 408.62556 409.94336 412.86626 419.41207 422.35819 425.19433 434.31419 [134] 437.25053 440.31129 443.11643 444.63135 446.07829 449.05113 451.78758 [141] 453.52020 454.96819 456.50425 458.01516 460.72287 462.13633 463.51082 [148] 466.40513 467.75637 469.01538 471.94549 473.27826 477.49264 479.07979 [155] 481.74787 483.27321 485.93227 487.55105 488.94616 490.41701 491.81100 [162] 493.02774 494.36606 497.12410 499.65646 500.96986 502.16644 504.98695 [169] 506.28204 507.66745 508.90352 510.14284 511.50867 512.74850 514.26898 [176] 515.63734 519.70862 524.86129 528.53935 531.13744 532.40716 533.73648 [183] 534.85987 538.62071 541.04406 543.48082 546.00935 547.10742 548.61002 [190] 551.19920 553.57194 555.93546 557.14156 558.38245 561.83452 562.99514 [197] 564.21376 565.56833 566.77303 567.90115 569.10564 570.25358 571.49732 [204] 572.74179 573.80147 574.92005 576.16040 577.60061 579.93690 581.01641 [211] 582.23066 583.36941 584.42842 586.80445 587.95255 589.18844 590.32008 [218] 591.49793 592.60097 593.79614 594.87011 596.12795 597.31366 598.32353 [225] 599.27280 600.43819 601.63167 602.72373 603.90823 605.20066 606.35009 [232] 607.30662 608.47040 609.67330 610.72856 611.66741 612.66246 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 24556 records [1] 5 2453 24556 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 26648 [1] "Average Date / Time for slice RF05 = 2011-06-26 00:54:27.8859858512878" [1] "sum(lsel) = 1263" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 4.643433 812.307053 [1] 4.643433 812.307053 [1] 187.6929 995.3566 [1] 4.440892e-16 9.999990e+05 [1] "highestmid = 670.725891" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF05 APO_AO2 range = -369.64,-317.39" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 24556 records [1] 5 2453 24556 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 26661 [1] "Average Date / Time for slice RF05 = 2011-06-26 00:54:18.2041139602661" [1] "sum(lsel) = 1264" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 4.643433 812.307053 [1] 4.643433 812.307053 [1] 187.6929 995.3566 [1] 4.440892e-16 9.999990e+05 [1] "highestmid = 670.725891" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF05 O2_AO2 range = -571.05,-529.21" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 24556 records [1] 5 2453 24556 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27570 [1] "Average Date / Time for slice RF05 = 2011-06-26 00:55:42.1683168411255" [1] "sum(lsel) = 2020" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 2.147278 812.307053 [1] 2.147278 812.307053 [1] 187.6929 997.8527 [1] 4.440892e-16 9.999990e+05 [1] "highestmid = 670.725891" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF05 CO2_AO2 range = 387.67,393.66" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "making html" [1] "making index html"