[1] "2025-05-13 12:19:01 MDT" options [1,] "file" "110616a" [2,] "flight" "RF02" [3,] "project" "HIPPO4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "5" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "110616a" [1] "Reading in flight and plotting intervals" Read 13 records [1] "Reading in /scr/raf/stephens/AO2DAT/110616a.mr" Read 14044 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.59 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.56 seconds" [1] "New JOGEST = 2.56 seconds" [1] "New VALVE SKIP = 23 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/110616a.hr" Read 56178 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 14044 56178 [1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH" [1] 14044 56178 [1] "Converting hrdata statout" [1] "Tue May 13 12:19:01 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30067 description: HS CO2 = 359 O2 = -353.8" [1] "position 2 cylinder OK30068 description: LS CO2 = 392.23 O2 = -932.9" [1] "position 3 cylinder OK30071 description: LT CO2 = 380.46 O2 = -460.4" [1] "position 4 cylinder OK30053 description: WT CO2 = 381.16 O2 = -811.4" [1] "position 5 cylinder OK30057 description: LP CO2 = 421.97 O2 = -1172.2" [1] 359.0007 392.2348 380.4632 381.1577 421.9679 [1] -353.8067 -932.8765 -460.4156 -811.3729 -1172.1899 [1] "Nominal linear calibrations:" [1] "co2scl = 0.983 co2off = 5 o2scla = -0.049 o2offa = -38.7" [1] "(dV/V)/(dXO2/XO2) = -4.306" [1] "(dV/V)/d(O2/N2) = -3.404" [1] "Reading in very high resolution timeseries" Read 280880 records [1] 280880 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 12:19:02 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 12:19:04 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.404" [1] "o2scaleavenew_drelVdrelP = -4.306" [1] "median(o2scalenew) = -3.403" [1] "Empirical dV/V vs dP/P relationship =-2.907, r^2 =0.003, damping =0.675" [1] "Tue May 13 12:19:04 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 12:19:45 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 3624044.74272 SECONDS" [1] "Tue May 13 12:19:45 PM MDT 2025 done recreating mr o2diffs" [1] "Removed 2 medium-rate record(s) with accumulation errors" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 2988.957 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 3008.604 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 3003.813 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -15.118 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 14 [1] 174 [1] 197 [1] 197 [1] 197 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 1 167.7232 2350.0567 1028280.5 1 [2,] 2 167.7232 2083.9502 1030657.9 -1 [3,] 3 167.7232 1987.2325 1028566.9 1 [4,] 72 167.7253 1969.8848 1030487.8 -1 [5,] 73 167.7253 1412.9419 1028438.8 1 [6,] 74 167.7254 686.0787 1029156.0 -1 [7,] 140 167.7273 422.0688 1029025.2 -1 [8,] 141 167.7274 1317.3886 1028570.3 1 [9,] 142 167.7274 2271.0998 1030957.3 -1 [10,] 208 167.7293 2413.6911 1030956.2 -1 [11,] 209 167.7294 1776.5879 1028450.5 1 [12,] 210 167.7294 1115.5265 1029592.1 -1 [13,] 276 167.7313 965.8334 1029269.9 -1 [14,] 277 167.7314 1987.7464 1028234.4 1 [15,] 278 167.7314 3042.9383 1031420.5 -1 [16,] 280 167.7315 3243.5003 1031625.8 -1 [17,] 354 167.7336 3362.5622 1031552.1 -1 [18,] 355 167.7337 3030.5317 1028058.3 1 [19,] 356 167.7337 2588.2076 1030746.1 -1 [20,] 424 167.7357 2432.9228 1030509.1 -1 [21,] 425 167.7358 1638.7373 1027984.7 1 [22,] 426 167.7358 634.8778 1028638.0 -1 [23,] 494 167.7378 464.6285 1028227.0 -1 [24,] 495 167.7378 1699.1683 1027713.8 1 [25,] 496 167.7379 2983.5881 1030818.8 -1 [26,] 498 167.7379 3256.1614 1031073.1 -1 [27,] 702 167.7441 3375.7475 1029966.7 -1 [28,] 703 167.7441 2472.0412 1026463.5 1 [29,] 704 167.7442 1148.9254 1027579.6 -1 [30,] 705 167.7442 642.4405 1026452.1 1 [31,] 706 167.7442 513.3138 1026981.6 -1 [32,] 772 167.7463 533.3688 1026840.9 -1 [33,] 773 167.7463 1373.5179 1026260.2 1 [34,] 774 167.7463 2265.1579 1028625.7 -1 [35,] 842 167.7484 2116.5085 1028829.6 -1 [36,] 908 167.7504 1987.4782 1029423.7 -1 [37,] 909 167.7504 2076.1385 1027397.0 1 [38,] 910 167.7505 2409.5835 1030019.0 -1 [39,] 911 167.7505 2911.7664 1027484.2 1 [40,] 912 167.7505 3285.2276 1030900.8 -1 [41,] 1040 167.7544 3407.3158 1032839.8 -1 [42,] 1041 167.7544 3222.5400 1029295.1 1 [43,] 1042 167.7544 2931.7343 1032306.6 -1 [44,] 1044 167.7545 2516.8980 1031931.4 -1 [45,] 1108 167.7564 2384.5328 1032198.3 -1 [46,] 1109 167.7564 1617.0566 1029718.9 1 [47,] 1110 167.7565 796.5826 1030359.9 -1 [48,] 1112 167.7565 376.0999 1029966.0 -1 [49,] 1113 167.7565 121.6187 1029630.5 1 [50,] 1114 167.7566 108.7122 1029424.8 -1 [51,] 1115 167.7566 331.1476 1029046.0 1 [52,] 1176 167.7585 745.1495 1029992.2 -1 [53,] 2202 167.7890 1137.5877 1033305.6 -1 [54,] 2206 167.7892 1261.7982 1033395.9 -1 [55,] 2207 167.7892 1821.7537 1032056.7 1 [56,] 2208 167.7892 2391.8771 1034548.7 -1 [57,] 2274 167.7910 2259.8190 1034015.3 -1 [58,] 2275 167.7910 1466.2026 1031680.0 1 [59,] 2276 167.7910 640.1193 1032323.4 -1 [60,] 2340 167.7927 392.0246 1031384.7 -1 [61,] 2341 167.7927 659.1458 1030975.6 1 [62,] 2342 167.7927 954.9913 1032000.6 -1 [63,] 3410 167.8238 1294.4369 1026354.2 -1 [64,] 3414 167.8239 1227.5936 1026262.1 -1 [65,] 3415 167.8239 848.8792 1024975.1 1 [66,] 3416 167.8240 492.5697 1025455.7 -1 [67,] 3480 167.8259 372.4687 1024425.6 -1 [68,] 3481 167.8260 970.4647 1024032.0 1 [69,] 3482 167.8260 1686.4889 1025842.5 -1 [70,] 3483 167.8260 2165.0083 1023999.8 1 [71,] 3484 167.8261 2384.2128 1026464.0 -1 [72,] 3548 167.8280 2347.5997 1025268.2 -1 [73,] 3549 167.8280 1868.7304 1022849.4 1 [74,] 3550 167.8281 1396.4768 1024293.7 -1 [75,] 4534 167.8585 1143.3216 1019310.0 -1 [76,] 4538 167.8586 1199.5695 1019393.5 -1 [77,] 4539 167.8586 1789.6570 1018144.2 1 [78,] 4540 167.8587 2368.0527 1020566.2 -1 [79,] 4606 167.8607 2380.8741 1020794.1 -1 [80,] 4607 167.8607 1472.5374 1018377.1 1 [81,] 4608 167.8607 596.1281 1018977.0 -1 [82,] 4676 167.8626 815.4428 1019419.4 -1 [83,] 4742 167.8643 869.8035 1019427.2 -1 [84,] 4743 167.8643 1214.2123 1018545.4 1 [85,] 4744 167.8643 1601.7245 1020219.7 -1 [86,] 4746 167.8644 1941.5285 1020552.9 -1 [87,] 4810 167.8660 1999.2726 1020453.8 -1 [88,] 4811 167.8661 1740.5422 1018407.0 1 [89,] 4812 167.8661 1449.4879 1019891.8 -1 [90,] 5684 167.8932 1358.3077 1015724.5 -1 [91,] 5688 167.8933 1322.6640 1015686.7 -1 [92,] 5689 167.8933 930.6047 1014320.8 1 [93,] 5690 167.8934 508.8421 1014816.7 -1 [94,] 5754 167.8954 391.9501 1014174.3 -1 [95,] 5755 167.8954 1063.8902 1013765.7 1 [96,] 5756 167.8954 1817.0797 1015681.6 -1 [97,] 5757 167.8954 2254.6816 1013751.9 1 [98,] 5758 167.8955 2402.1609 1016197.7 -1 [99,] 5822 167.8975 2335.3230 1015396.0 -1 [100,] 5823 167.8975 1888.3386 1013032.0 1 [101,] 5824 167.8975 1455.3563 1014536.8 -1 [102,] 6856 167.9271 1354.5368 1001477.5 -1 [103,] 6858 167.9272 1348.3677 1001470.6 -1 [104,] 6859 167.9272 1734.0814 1000099.1 1 [105,] 6860 167.9272 2235.5520 1002350.6 -1 [106,] 6936 167.9296 2395.6341 1001848.2 -1 [107,] 6937 167.9296 1484.4230 999437.5 1 [108,] 6938 167.9296 593.1982 1000005.0 -1 [109,] 7012 167.9319 388.8904 999380.3 -1 [110,] 7013 167.9319 648.3897 998987.3 1 [111,] 7014 167.9319 952.4815 999995.4 -1 [112,] 8022 167.9608 1341.1242 1000426.8 -1 [113,] 8026 167.9609 1310.9085 1000408.5 -1 [114,] 8027 167.9609 907.5403 999076.5 1 [115,] 8028 167.9610 494.8926 999547.9 -1 [116,] 8102 167.9632 437.6674 999434.9 -1 [117,] 8103 167.9633 1376.8423 998982.1 1 [118,] 8104 167.9633 2287.9134 1001295.0 -1 [119,] 8178 167.9653 2465.8156 1001193.2 -1 [120,] 8179 167.9653 1980.3441 998710.2 1 [121,] 8180 167.9653 1407.1241 1000067.0 -1 [122,] 8182 167.9654 983.7336 999667.2 -1 [123,] 8256 167.9673 841.5102 999195.9 -1 [124,] 8257 167.9673 1341.5060 998357.2 1 [125,] 8258 167.9674 1945.7537 1000349.4 -1 [126,] 8260 167.9674 2374.5640 1000741.4 -1 [127,] 8334 167.9693 2456.9210 1000338.7 -1 [128,] 8335 167.9694 1788.3317 997873.0 1 [129,] 8336 167.9694 1040.8366 998852.5 -1 [130,] 8338 167.9694 515.0341 998355.7 -1 [131,] 8412 167.9716 463.8922 997440.4 -1 [132,] 8413 167.9716 1161.2001 996956.4 1 [133,] 8414 167.9717 1839.3418 998815.2 -1 [134,] 8490 167.9740 1921.7814 997957.8 -1 [135,] 8491 167.9740 1652.3333 996019.3 1 [136,] 8492 167.9741 1383.5410 997439.4 -1 [137,] 9416 168.0020 1345.6424 995370.2 -1 [138,] 9418 168.0020 1320.6147 995355.3 -1 [139,] 9419 168.0020 1099.9589 994032.0 1 [140,] 9420 168.0021 827.1241 994811.5 -1 [141,] 9422 168.0021 442.4616 994415.0 -1 [142,] 9488 168.0041 503.4524 994260.6 -1 [143,] 9489 168.0042 1442.8305 993734.9 1 [144,] 9490 168.0042 2302.6972 996037.6 -1 [145,] 9556 168.0062 2464.4824 995723.9 -1 [146,] 9557 168.0062 2117.8144 993257.3 1 [147,] 9558 168.0062 1714.6531 994957.5 -1 [148,] 10696 168.0366 1319.9260 986985.7 -1 [149,] 10700 168.0367 1301.6373 986938.4 -1 [150,] 10701 168.0368 1682.6783 985614.4 1 [151,] 10702 168.0368 2135.6080 987748.8 -1 [152,] 10722 168.0374 2403.7711 987629.4 -1 [153,] 10723 168.0374 1934.1456 985260.0 1 [154,] 10724 168.0374 1461.2500 986722.2 -1 [155,] 11094 168.0486 1295.2162 986892.0 -1 [156,] 11098 168.0487 1424.5778 987107.5 -1 [157,] 11099 168.0487 1881.0435 985672.7 1 [158,] 11100 168.0488 2354.6152 988007.2 -1 [159,] 11162 168.0504 2461.8679 989083.6 -1 [160,] 11163 168.0504 2315.3251 986652.2 1 [161,] 11164 168.0504 1898.6425 988471.1 -1 [162,] 11165 168.0504 1182.6841 986694.9 1 [163,] 11166 168.0505 565.1910 987245.7 -1 [164,] 11232 168.0522 853.1360 988525.0 -1 [165,] 12422 168.0836 1205.6824 991665.6 -1 [166,] 12426 168.0837 1173.6628 991713.4 -1 [167,] 12427 168.0837 828.1256 990537.4 1 [168,] 12428 168.0838 482.3541 991007.1 -1 [169,] 12502 168.0861 719.7620 992716.8 -1 [170,] 12503 168.0861 1575.5560 991957.4 1 [171,] 12504 168.0861 2342.3142 994328.6 -1 [172,] 12578 168.0884 2098.5961 995472.8 -1 [173,] 12579 168.0884 1677.8676 993457.2 1 [174,] 12580 168.0885 1318.7542 994817.5 -1 [175,] 13714 168.1183 1339.8814 993790.1 -1 [176,] 13718 168.1184 1404.8665 993864.3 -1 [177,] 13719 168.1185 1898.9717 992404.4 1 [178,] 13720 168.1185 2397.5367 994781.9 -1 [179,] 13786 168.1206 2283.7461 994309.0 -1 [180,] 13787 168.1206 1414.0111 992058.9 1 [181,] 13788 168.1206 582.9873 992633.0 -1 [182,] 13854 168.1227 553.0176 992216.3 -1 [183,] 13855 168.1227 1251.9352 991604.7 1 [184,] 13856 168.1227 1891.5462 993484.7 -1 [185,] 13922 168.1248 1916.2660 992539.9 -1 [186,] 13923 168.1248 1677.5493 990629.5 1 [187,] 13924 168.1248 1340.4666 991997.1 -1 [188,] 14019 168.1278 1339.5813 988794.6 1 [189,] 14020 168.1279 1228.5465 990146.1 -1 [190,] 14021 168.1279 1186.0167 989158.5 1 [191,] 14022 168.1279 1279.3737 990352.9 -1 [192,] 14023 168.1279 1381.0652 988921.5 1 [193,] 14038 168.1284 1279.6511 989889.4 -1 [194,] 14039 168.1285 2522.3818 988559.6 1 [195,] 14040 168.1285 16938.2725 1007970.5 -1 [196,] 14041 168.1285 59531.5779 988767.9 1 [197,] 14042 168.1286 102331.0652 1104995.1 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 3149 167.8157 388.225 [2,] 5271 167.8803 297.691 [3,] 8852 167.9849 10250.110 [4,] 11072 168.0480 99059960.000 [5,] 11505 168.0593 298.493 [6,] 11625 168.0624 1287.684 [7,] 13100 168.1018 98353.900 [8,] 13652 168.1164 295.965 [9,] 14041 168.1285 386.479 [10,] 14042 168.1286 382.270 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -207.867 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -213.418 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -215.249 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -15.118 PER MEG" [1] "Screened 3 O2 and CO2 values when pdsp not controlling" [1] 359.0007 392.2348 380.4632 381.1577 421.9679 [1] -353.8067 -932.8765 -460.4156 -811.3729 -1172.1899 [1] "Nominal linear calibrations:" [1] "co2scl = 0.983 co2off = 5 o2scla = -0.049 o2offa = -38.8" [1] "(dV/V)/(dXO2/XO2) = -4.295" [1] "(dV/V)/d(O2/N2) = -3.396" [1] "Finding cal and sample periods" [1] "Median Cal: 2.93 minutes" [1] "Average Cal: 2.83 minutes" [1] "Shortest Cal: 0.88 minutes" [1] "Longest Cal: 4.99 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 14" [1] "at: 38" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00508" [1] "HS CO2 vs. PACAB: m = -0.00812, r^2 = 0.85" [1] "LS CO2 vs. PACAB: m = -0.00203, r^2 = 0.18" [1] "HS+LS LIH2O vs. PACAB: m = -8.14e-05" [1] "HS LIH2O vs. PACAB: m = -9.4e-05, r^2 = 0.59" [1] "LS LIH2O vs. PACAB: m = -6.88e-05, r^2 = 0.39" [1] "HS+LS CO2 vs. LIH2O: m = 22.4" [1] "HS CO2 vs. LIH2O: m = 34, r^2 = 0.64" [1] "LS CO2 vs. LIH2O: m = 10.8, r^2 = 0.1" [1] "APCO2 vs. PACAB: m = 0.000689, r^2 = 0" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0359" [1] "HS O2 vs. PACAB: m = 0.00114, r^2 = 0" [1] "LS O2 vs. PACAB: m = 0.0707, r^2 = 0.11" [1] "HS+LS O2 vs. LIH2O: m = -509" [1] "HS O2 vs. LIH2O: m = -649, r^2 = 0.11" [1] "LS O2 vs. LIH2O: m = -370, r^2 = 0.06" [1] "HS+LS O2 vs. PAO2: m = -20" [1] "HS O2 vs. PAO2: m = -32, r^2 = 0.27" [1] "LS O2 vs. PAO2: m = -7.97, r^2 = 0.05" [1] "HS+LS O2 vs. TPBOX: m = 3.07" [1] "HS O2 vs. TPBOX: m = 6.14, r^2 = 0.18" [1] "LS O2 vs. TPBOX: m = -0.0102, r^2 = 0" [1] "APO vs. PACAB: m = -0.0121, r^2 = 0" [1] "APO vs. PAO2: m = 21.8, r^2 = 0.02" [1] "APO vs. TPBOX: m = 9.53, r^2 = 0.04" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -4.67, r^2 = 0.1" [1] "LS CO2 vs. LiCor Cell P: m = 0.354, r^2 = 0" [1] "HS CO2 vs. CO2 Vol P: m = -0.471, r^2 = 0.03" [1] "LS CO2 vs. CO2 Vol P: m = 0.254, r^2 = 0.02" [1] "HS CO2 vs. SLOPE: m = 0.0342, r^2 = 0" [1] "LS CO2 vs. SLOPE: m = 0.102, r^2 = 0" [1] "HS O2 vs. O2 Vol P: m = -37.4, r^2 = 0.1" [1] "LS O2 vs. O2 Vol P: m = -8.98, r^2 = 0.06" [1] "HS O2 vs. O2 Cell T: m = 4.64, r^2 = 0.01" [1] "LS O2 vs. O2 Cell T: m = 3.92, r^2 = 0.05" [1] "HS O2 vs. CO2 Vol P: m = -70, r^2 = 0.29" [1] "LS O2 vs. CO2 Vol P: m = 3.88, r^2 = 0.01" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.829, r^2 = 0.01" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -0.243, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -70, r^2 = 0.29" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 3.88, r^2 = 0.01" [1] "HS O2 vs. LIH2O: m = -56.9, r^2 = 0" [1] "LS O2 vs. LIH2O: m = -370, r^2 = 0.06" [1] "HS O2 vs. SLOPE: m = -1.65, r^2 = 0.53" [1] "LS O2 vs. SLOPE: m = 0.00402, r^2 = 0" [1] "HS CO2 vs. Time: m = 18.31, r^2 = 0.93" [1] "LS CO2 vs. Time: m = 19.072, r^2 = 0.94" [1] "HS CO2 vs. Cylinder T: m = 0.298, r^2 = 0" [1] "LS CO2 vs. Cylinder T: m = 0.096, r^2 = 0.001" [1] "HS CO2 vs. Regulator T: m = 0.403, r^2 = 0.34" [1] "LS CO2 vs. Regulator T: m = 0.118, r^2 = 0.059" [1] "HS CO2 vs. Ref. Volumes T: m = 0.112, r^2 = 0" [1] "LS CO2 vs. Ref. Volumes T: m = 0.304, r^2 = 0.062" [1] "HS CO2 vs. Manifold T: m = 0.238, r^2 = 0.06" [1] "LS CO2 vs. Manifold T: m = 0.111, r^2 = 0.036" [1] "HS CO2 vs. Pump Box T: m = 0.217, r^2 = 0.14" [1] "LS CO2 vs. Pump Box T: m = 0.017, r^2 = 0.002" [1] "HS O2 vs. Cylinder T: m = 136.015, r^2 = 0.42" [1] "LS O2 vs. Cylinder T: m = -14.099, r^2 = 0.02" [1] "HS O2 vs. Regulator T: m = 9.477, r^2 = 0.08" [1] "LS O2 vs. Regulator T: m = -2.486, r^2 = 0.032" [1] "HS O2 vs. Ref. Volumes T: m = -4.418, r^2 = 0" [1] "LS O2 vs. Ref. Volumes T: m = 10.763, r^2 = 0.096" [1] "HS O2 vs. Manifold T: m = 12.658, r^2 = 0.07" [1] "LS O2 vs. Manifold T: m = 4.109, r^2 = 0.061" [1] "HS O2 vs. Pump Box T: m = 8.824, r^2 = 0.1" [1] "LS O2 vs. Pump Box T: m = 0.965, r^2 = 0.009" [1] "HS CO2 vs. WT P: m = -0.007, r^2 = 0.62" [1] "LS CO2 vs. WT P: m = -0.004, r^2 = 0.245" [1] "HS CO2 vs. SP P: m = -0.00767, r^2 = 0.77" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.08, r^2 = 0.64" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.075, r^2 = 0.64" [1] "LS CO2 vs. SP P: m = -0.00362, r^2 = 0.33" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.065, r^2 = 0.29" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.072, r^2 = 0.29" [1] "HS CO2 vs. WT FL: m = 0.017, r^2 = 0" [1] "LS CO2 vs. WT FL: m = 0.071, r^2 = 0.048" [1] "HS CO2 vs. SP FL: m = 0.206, r^2 = 0.55" [1] "LS CO2 vs. SP FL: m = 0.097, r^2 = 0.226" [1] "HS O2 vs. SLPDIFF: m = -0.005, r^2 = 0" [1] "LS O2 vs. SLPDIFF: m = 0.273, r^2 = 0.064" [1] "HS O2 vs. WT P: m = -0.025, r^2 = 0" [1] "LS O2 vs. WT P: m = 0.06, r^2 = 0.08" [1] "HS O2 vs. SP P: m = -0.026, r^2 = 0" [1] "LS O2 vs. SP P: m = 0.062, r^2 = 0.078" [1] "HS O2 vs. WT FL: m = 3.972, r^2 = 0.02" [1] "LS O2 vs. WT FL: m = 1.391, r^2 = 0.023" [1] "HS O2 vs. SP FL: m = 1.276, r^2 = 0.01" [1] "LS O2 vs. SP FL: m = -1.012, r^2 = 0.031" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 73.61" [1] "Empirical LP O2 lag flow(s): 96.1" [1] "Empirical LP CO2 lag time(s): 39.57" [1] "Empirical LP CO2 lag flow(s): 96.1" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.75" [1] "Median all HS CO2 SD = 0.71" [1] "Median all LS CO2 SD = 0.76" [1] "Median all LT CO2 SD = 0.77" [1] "Median all WT CO2 SD = 0.76" [1] "Median all HS or LS CO2 SD = 0.73" [1] "Median all cal O2 SD = 2.82" [1] "Median all HS O2 SD = 2.5" [1] "Median all LS O2 SD = 2.32" [1] "Median all LT O2 SD = 4.77" [1] "Median all WT O2 SD = 3.19" [1] "Median all HS or LS O2 SD = 2.48" [1] "Median all cal CO2 Slope = 0.02" [1] "Median all HS CO2 Slope = 0.09" [1] "Median all LS CO2 Slope = 0.02" [1] "Median all LT CO2 Slope = -0.15" [1] "Median all WT CO2 Slope = -0.03" [1] "Median all HS or LS CO2 Slope = 0.03" [1] "Median all cal O2 Slope = 1.58" [1] "Median all HS O2 Slope = 2.38" [1] "Median all LS O2 Slope = 1.13" [1] "Median all LT O2 Slope = 5.64" [1] "Median all WT O2 Slope = 0.87" [1] "Median all HS or LS O2 Slope = 1.83" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 4.85 per meg" [1] "Initial O2 Calibration Offset = -13.44 per meg" [1] "SD of O2 Calibration (post-takeoff) = 3.14 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -13.21 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 6.27 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO4-5 inlet volumes" [1] "before any lag: 62480.16 97507.15" [1] "Time lag adjustments = 5 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 40.7 at 99.4 sccm" [1] "Median O2 delay + tlagff = 41.5 at 99.4 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 38.4 at 99.4 sccm" [1] "Median O2 delay from 3-way + tlagff = 39.2 at 99.4 sccm" [1] "after calc and ff lag: 62436.02 97480.01" [1] "2025-05-13 12:20:31 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 30 1-Hz values because of data gaps at:" [1] 168.1283 168.1283 168.1283 168.1283 168.1284 168.1284 168.1284 168.1284 [9] 168.1284 168.1284 168.1284 168.1284 168.1284 168.1285 168.1285 168.1285 [17] 168.1285 168.1285 168.1285 168.1285 168.1285 168.1286 168.1286 168.1286 [25] 168.1286 168.1286 168.1286 168.1286 168.1286 168.1286 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 30 O2 values from manual exclude period 168.127605 to 168.128821" [1] "Not reporting 30 APO values from manual exclude period 168.127605 to 168.128821" [1] "Not reporting 25 O2 values from manual exclude period 167.779178 to 167.779908" [1] "Not reporting 25 APO values from manual exclude period 167.779178 to 167.779908" [1] "Not reporting 120 smoothed O2 values from manual exclude period 168.127108253823 to 168.128506840523" [1] "Not reporting 120 smoothed APO values from manual exclude period 168.127108253823 to 168.128506840523" [1] "Not reporting 64 smoothed O2 values from manual exclude period 167.77867998805 to 167.779419066554" [1] "Not reporting 64 smoothed APO values from manual exclude period 167.77867998805 to 167.779419066554" [1] "Not reporting 120 smoothed O2 values from manual exclude period 168.127108253823 to 168.128506840523" [1] "Not reporting 120 smoothed APO values from manual exclude period 168.127108253823 to 168.128506840523" [1] "Not reporting 64 smoothed O2 values from manual exclude period 167.77867998805 to 167.779419066554" [1] "Not reporting 64 smoothed APO values from manual exclude period 167.77867998805 to 167.779419066554" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 32161 records [1] 2 3216 32161 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27380 [1] "Average Date / Time for slice RF02 = 2011-06-16 22:32:46.5384614467621" [1] "sum(lsel) = 2574" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.081726 821.198257 [1] 0.081726 821.198257 [1] 178.8017 999.9183 [1] 1.110223e-16 9.999990e+05 [1] "highestmid = 670.794312" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF02 APO_AO2 range = -376.92,-303.62" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 32161 records [1] 2 3216 32161 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27390 [1] "Average Date / Time for slice RF02 = 2011-06-16 22:32:46.5384614467621" [1] "sum(lsel) = 2574" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.081726 821.198257 [1] 0.081726 821.198257 [1] 178.8017 999.9183 [1] 1.110223e-16 9.999990e+05 [1] "highestmid = 670.794312" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF02 O2_AO2 range = -610.21,-533.73" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 32161 records [1] 2 3216 32161 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27564 [1] "Average Date / Time for slice RF02 = 2011-06-16 22:32:08.0038685798645" [1] "sum(lsel) = 2585" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.081726 821.198257 [1] 0.081726 821.198257 [1] 178.8017 999.9183 [1] 1.110223e-16 9.999990e+05 [1] "highestmid = 670.794312" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF02 CO2_AO2 range = 387.08,395.63" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 21 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"