[1] "2025-05-13 12:17:35 MDT" options [1,] "file" "110614a" [2,] "flight" "RF01" [3,] "project" "HIPPO4" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "5" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "110614a" [1] "Reading in flight and plotting intervals" Read 8 records [1] "Reading in /scr/raf/stephens/AO2DAT/110614a.mr" Read 9150 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.59 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.56 seconds" [1] "New JOGEST = 2.56 seconds" [1] "New VALVE SKIP = 23 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/110614a.hr" Read 36602 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 12:17:35 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30067 description: HS CO2 = 359 O2 = -353.8" [1] "position 2 cylinder OK30068 description: LS CO2 = 392.23 O2 = -932.7" [1] "position 3 cylinder OK30071 description: LT CO2 = 380.46 O2 = -460.4" [1] "position 4 cylinder OK30053 description: WT CO2 = 381.15 O2 = -811.2" [1] "position 5 cylinder OK30057 description: LP CO2 = 421.97 O2 = -1171.7" [1] 359.0005 392.2341 380.4630 381.1535 421.9681 [1] -353.7533 -932.7071 -460.3903 -811.2431 -1171.6592 [1] "Nominal linear calibrations:" [1] "co2scl = 0.988 co2off = 2.72 o2scla = -0.049 o2offa = -33.8" [1] "(dV/V)/(dXO2/XO2) = -4.252" [1] "(dV/V)/d(O2/N2) = -3.361" [1] "Reading in very high resolution timeseries" Read 183000 records [1] 183000 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 12:17:36 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 12:17:37 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.361" [1] "o2scaleavenew_drelVdrelP = -4.252" [1] "median(o2scalenew) = -3.41" [1] "Empirical dV/V vs dP/P relationship =-2.924, r^2 =0.007, damping =0.688" [1] "Tue May 13 12:17:37 PM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 12:17:59 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 12:17:59 PM MDT 2025 done recreating mr o2diffs" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 485.965 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 483.201 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 485.739 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 19.604 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 12 [1] 123 [1] 136 [1] 136 [1] 137 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 62 165.6524 1977.8040 1020682.9 -1 [2,] 63 165.6524 1438.8462 1018688.0 1 [3,] 64 165.6525 942.3538 1019672.7 -1 [4,] 120 165.6542 755.3885 1019416.8 -1 [5,] 121 165.6542 1711.4095 1018596.7 1 [6,] 122 165.6542 2649.6265 1021328.8 -1 [7,] 178 165.6560 2500.6505 1020640.7 -1 [8,] 179 165.6560 1915.3648 1018078.7 1 [9,] 180 165.6560 1338.4351 1019437.4 -1 [10,] 236 165.6577 1317.9405 1018650.8 -1 [11,] 237 165.6578 2348.7529 1017220.9 1 [12,] 238 165.6578 3335.3313 1020643.6 -1 [13,] 342 165.6610 3591.6901 1018610.2 -1 [14,] 343 165.6610 3304.4272 1014906.5 1 [15,] 344 165.6610 2935.5996 1017876.8 -1 [16,] 346 165.6611 2713.4122 1017620.2 -1 [17,] 400 165.6627 2563.9122 1016466.4 -1 [18,] 401 165.6628 1588.6915 1013813.5 1 [19,] 402 165.6628 756.7003 1014612.7 -1 [20,] 456 165.6645 594.1762 1013748.9 -1 [21,] 457 165.6645 1549.6668 1013110.8 1 [22,] 458 165.6645 2670.1445 1015958.4 -1 [23,] 459 165.6646 3258.0560 1013138.1 1 [24,] 460 165.6646 3430.7284 1016647.3 -1 [25,] 593 165.6688 2457.5005 1011736.7 1 [26,] 594 165.6688 3883.5165 1015747.5 -1 [27,] 595 165.6688 10484.9030 1011700.9 1 [28,] 596 165.6688 16294.7316 1028904.0 -1 [29,] 597 165.6689 16416.0114 1011562.3 1 [30,] 598 165.6689 12108.5907 1023630.0 -1 [31,] 599 165.6689 7760.8612 1011498.9 1 [32,] 600 165.6690 4391.4866 1015973.2 -1 [33,] 601 165.6690 2838.5992 1011637.4 1 [34,] 602 165.6690 2425.2579 1014054.5 -1 [35,] 603 165.6691 2189.7324 1011614.6 1 [36,] 604 165.6691 1840.5280 1013550.0 -1 [37,] 608 165.6692 1623.2163 1013129.1 -1 [38,] 609 165.6693 1445.5273 1011377.9 1 [39,] 610 165.6693 1434.0847 1012455.4 -1 [40,] 611 165.6693 1542.9428 1010760.3 1 [41,] 676 165.6713 1414.7616 1010648.1 -1 [42,] 678 165.6714 1423.3307 1010608.1 -1 [43,] 679 165.6714 1175.9968 1009166.1 1 [44,] 680 165.6714 873.5789 1009998.2 -1 [45,] 682 165.6715 684.7930 1009729.9 -1 [46,] 734 165.6731 617.6222 1007833.5 -1 [47,] 735 165.6731 1080.2255 1007180.7 1 [48,] 736 165.6732 1706.3078 1008982.0 -1 [49,] 737 165.6732 2250.7239 1007123.0 1 [50,] 738 165.6732 2595.4617 1009740.4 -1 [51,] 792 165.6748 2441.6448 1007843.7 -1 [52,] 794 165.6749 2275.9224 1007637.1 -1 [53,] 806 165.6752 2106.9431 1007130.4 -1 [54,] 846 165.6764 2078.7951 1005968.0 -1 [55,] 847 165.6764 1867.8145 1003816.2 1 [56,] 848 165.6765 1556.4606 1005372.0 -1 [57,] 1824 165.7060 1203.4927 983625.4 -1 [58,] 1828 165.7061 1300.8352 983668.0 -1 [59,] 1829 165.7062 1927.0910 982326.9 1 [60,] 1830 165.7062 2516.4066 984805.0 -1 [61,] 1886 165.7079 2510.9943 983666.5 -1 [62,] 1887 165.7079 1657.8004 981157.4 1 [63,] 1888 165.7079 778.8914 981896.4 -1 [64,] 1944 165.7096 450.2211 980486.2 -1 [65,] 1945 165.7096 752.5425 980007.3 1 [66,] 1946 165.7097 1071.0225 981055.7 -1 [67,] 2976 165.7407 1152.0417 971334.3 -1 [68,] 2980 165.7409 1088.6386 971279.6 -1 [69,] 2981 165.7409 817.5524 970199.6 1 [70,] 2982 165.7409 568.6132 970748.4 -1 [71,] 3036 165.7426 511.7247 970876.1 -1 [72,] 3037 165.7426 1476.6034 970375.6 1 [73,] 3038 165.7426 2398.5241 972755.8 -1 [74,] 3092 165.7443 2274.1854 973203.4 -1 [75,] 3093 165.7443 1736.9240 971018.5 1 [76,] 3094 165.7444 1252.8008 972280.0 -1 [77,] 3583 165.7596 1385.1775 974454.8 1 [78,] 3584 165.7596 1307.4952 975867.3 -1 [79,] 3585 165.7596 1200.9211 974669.7 1 [80,] 4132 165.7754 1202.2428 978703.2 -1 [81,] 4136 165.7755 1230.0510 978750.4 -1 [82,] 4137 165.7756 1796.5295 977509.2 1 [83,] 4138 165.7756 2256.0983 979771.5 -1 [84,] 4140 165.7756 2483.5196 979979.8 -1 [85,] 4204 165.7773 2475.5584 980608.4 -1 [86,] 4205 165.7773 2052.5073 978179.5 1 [87,] 4206 165.7773 1476.1567 979562.3 -1 [88,] 4207 165.7774 962.8358 978193.8 1 [89,] 4208 165.7774 629.8980 978800.6 -1 [90,] 4272 165.7790 373.8088 979229.5 -1 [91,] 4273 165.7790 628.9282 978873.4 1 [92,] 4274 165.7791 885.6670 979802.9 -1 [93,] 5468 165.8104 1175.8056 998980.0 -1 [94,] 5472 165.8105 1140.5498 998972.0 -1 [95,] 5473 165.8106 834.2439 997815.6 1 [96,] 5474 165.8106 529.1310 998343.9 -1 [97,] 5536 165.8125 561.9787 999083.8 -1 [98,] 5537 165.8125 1481.8767 998494.9 1 [99,] 5538 165.8126 2355.0410 1000883.7 -1 [100,] 5600 165.8145 2439.4158 1002226.2 -1 [101,] 5601 165.8145 1762.6692 999803.0 1 [102,] 5602 165.8146 1213.5065 1001039.8 -1 [103,] 5664 165.8165 920.0040 1002201.3 -1 [104,] 5665 165.8165 1394.9448 1001277.9 1 [105,] 5666 165.8165 1896.1847 1003210.5 -1 [106,] 5728 165.8184 1984.3337 1003955.6 -1 [107,] 5729 165.8185 1711.2983 1001968.4 1 [108,] 5730 165.8185 1407.1362 1003420.1 -1 [109,] 6634 165.8451 1328.1063 1007546.1 -1 [110,] 6638 165.8453 1575.4764 1007887.1 -1 [111,] 6639 165.8453 2017.6554 1006248.6 1 [112,] 6640 165.8453 2444.7261 1008714.0 -1 [113,] 6694 165.8470 2483.1103 1009064.6 -1 [114,] 6695 165.8470 2038.7449 1006548.2 1 [115,] 6696 165.8471 1399.2357 1007888.8 -1 [116,] 6697 165.8471 883.9925 1006560.5 1 [117,] 6698 165.8471 569.2151 1007135.0 -1 [118,] 6752 165.8488 402.3958 1006980.4 -1 [119,] 6753 165.8488 823.6134 1006578.2 1 [120,] 6754 165.8488 1234.5574 1007870.5 -1 [121,] 7880 165.8798 1198.9499 1025432.8 -1 [122,] 7884 165.8799 1210.2434 1025484.2 -1 [123,] 7885 165.8800 937.4871 1024224.3 1 [124,] 7886 165.8800 658.7529 1024862.0 -1 [125,] 7942 165.8815 548.7318 1024992.1 -1 [126,] 7943 165.8815 1409.3760 1024422.0 1 [127,] 7944 165.8815 2299.2215 1026815.0 -1 [128,] 7998 165.8829 2482.2897 1027221.1 -1 [129,] 7999 165.8829 2152.1438 1024675.1 1 [130,] 8000 165.8829 1704.4149 1026428.7 -1 [131,] 9114 165.9119 1304.5510 1028958.5 -1 [132,] 9115 165.9120 1571.8114 1027716.2 1 [133,] 9116 165.9120 1601.2180 1029587.4 -1 [134,] 9117 165.9120 1343.5083 1028196.7 1 [135,] 9119 165.9121 1303.2475 1028255.2 1 [136,] 9120 165.9121 1296.9893 1029804.4 -1 [137,] 9121 165.9121 1183.2644 1028672.7 1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 2571 165.7281 97559960.000 [2,] 6908 165.8534 295.404 [3,] 6922 165.8538 10058.420 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 92.818 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 64.208 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 64.878 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 19.604 PER MEG" [1] 359.0005 392.2341 380.4630 381.1535 421.9681 [1] -353.7533 -932.7071 -460.3903 -811.2431 -1171.6592 [1] "Nominal linear calibrations:" [1] "co2scl = 0.988 co2off = 2.72 o2scla = -0.049 o2offa = -35.3" [1] "(dV/V)/(dXO2/XO2) = -4.285" [1] "(dV/V)/d(O2/N2) = -3.388" [1] "Finding cal and sample periods" [1] "Median Cal: 2.47 minutes" [1] "Average Cal: 2.48 minutes" [1] "Shortest Cal: 2.08 minutes" [1] "Longest Cal: 4.97 minutes" [1] "Removed 1 calibration period(s) with less than 30 seconds of data" [1] "at: 9" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00277" [1] "HS CO2 vs. PACAB: m = -0.00427, r^2 = 0.31" [1] "LS CO2 vs. PACAB: m = -0.00128, r^2 = 0.04" [1] "HS+LS LIH2O vs. PACAB: m = -1.66e-05" [1] "HS LIH2O vs. PACAB: m = -1.72e-05, r^2 = 0.07" [1] "LS LIH2O vs. PACAB: m = -1.6e-05, r^2 = 0.09" [1] "HS+LS CO2 vs. LIH2O: m = 87.4" [1] "HS CO2 vs. LIH2O: m = 79.1, r^2 = 0.36" [1] "LS CO2 vs. LIH2O: m = 95.8, r^2 = 0.36" [1] "APCO2 vs. PACAB: m = -0.0063, r^2 = 0.01" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.157" [1] "HS O2 vs. PACAB: m = -0.287, r^2 = 0.09" [1] "LS O2 vs. PACAB: m = -0.027, r^2 = 0" [1] "HS+LS O2 vs. LIH2O: m = -8140" [1] "HS O2 vs. LIH2O: m = -4320, r^2 = 0.09" [1] "LS O2 vs. LIH2O: m = -12000, r^2 = 0.32" [1] "HS+LS O2 vs. PAO2: m = -30.4" [1] "HS O2 vs. PAO2: m = -49.7, r^2 = 0.26" [1] "LS O2 vs. PAO2: m = -11, r^2 = 0.05" [1] "HS+LS O2 vs. TPBOX: m = -4.51" [1] "HS O2 vs. TPBOX: m = 1.5, r^2 = 0" [1] "LS O2 vs. TPBOX: m = -10.5, r^2 = 0.12" [1] "APO vs. PACAB: m = 0.111, r^2 = 0.01" [1] "APO vs. PAO2: m = -12.4, r^2 = 0.09" [1] "APO vs. TPBOX: m = 4.21, r^2 = 0.09" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.309, r^2 = 0" [1] "LS CO2 vs. LiCor Cell P: m = -0.228, r^2 = 0" [1] "HS CO2 vs. CO2 Vol P: m = -0.00813, r^2 = 0" [1] "LS CO2 vs. CO2 Vol P: m = 0.0939, r^2 = 0.01" [1] "HS CO2 vs. SLOPE: m = 0.968, r^2 = 0.34" [1] "LS CO2 vs. SLOPE: m = 0.719, r^2 = 0.21" [1] "HS O2 vs. O2 Vol P: m = -66.2, r^2 = 0.25" [1] "LS O2 vs. O2 Vol P: m = -41, r^2 = 0.07" [1] "HS O2 vs. O2 Cell T: m = 13.8, r^2 = 0.03" [1] "LS O2 vs. O2 Cell T: m = 10.2, r^2 = 0.01" [1] "HS O2 vs. CO2 Vol P: m = -48.3, r^2 = 0.36" [1] "LS O2 vs. CO2 Vol P: m = -21.5, r^2 = 0.06" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 14.1, r^2 = 0.13" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 0.581, r^2 = 0.08" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -48.3, r^2 = 0.36" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -21.5, r^2 = 0.06" [1] "HS O2 vs. LIH2O: m = -609, r^2 = 0" [1] "LS O2 vs. LIH2O: m = -12900, r^2 = 0.31" [1] "HS O2 vs. SLOPE: m = -0.828, r^2 = 0.29" [1] "LS O2 vs. SLOPE: m = -0.468, r^2 = 0.06" [1] "HS CO2 vs. Time: m = 24.465, r^2 = 0.96" [1] "LS CO2 vs. Time: m = 23.38, r^2 = 0.92" [1] "HS CO2 vs. Cylinder T: m = -0.54, r^2 = 0.23" [1] "LS CO2 vs. Cylinder T: m = -0.332, r^2 = 0.065" [1] "HS CO2 vs. Regulator T: m = -0.336, r^2 = 0.24" [1] "LS CO2 vs. Regulator T: m = -0.563, r^2 = 0.269" [1] "HS CO2 vs. Ref. Volumes T: m = 0.063, r^2 = 0" [1] "LS CO2 vs. Ref. Volumes T: m = 0.022, r^2 = 0" [1] "HS CO2 vs. Manifold T: m = 0.058, r^2 = 0.01" [1] "LS CO2 vs. Manifold T: m = -0.073, r^2 = 0.01" [1] "HS CO2 vs. Pump Box T: m = 0.143, r^2 = 0.1" [1] "LS CO2 vs. Pump Box T: m = 0.233, r^2 = 0.455" [1] "HS O2 vs. Cylinder T: m = -33.859, r^2 = 0.06" [1] "LS O2 vs. Cylinder T: m = 2.347, r^2 = 0" [1] "HS O2 vs. Regulator T: m = 59.577, r^2 = 0.47" [1] "LS O2 vs. Regulator T: m = 39.241, r^2 = 0.113" [1] "HS O2 vs. Ref. Volumes T: m = -51.075, r^2 = 0.17" [1] "LS O2 vs. Ref. Volumes T: m = -5.921, r^2 = 0.002" [1] "HS O2 vs. Manifold T: m = 19.946, r^2 = 0.08" [1] "LS O2 vs. Manifold T: m = 12.883, r^2 = 0.026" [1] "HS O2 vs. Pump Box T: m = 7.854, r^2 = 0.02" [1] "LS O2 vs. Pump Box T: m = -18.018, r^2 = 0.235" [1] "HS CO2 vs. WT P: m = -0.004, r^2 = 0.22" [1] "LS CO2 vs. WT P: m = -0.004, r^2 = 0.151" [1] "HS CO2 vs. SP P: m = -0.00453, r^2 = 0.6" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.016, r^2 = 0.23" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.011, r^2 = 0.23" [1] "LS CO2 vs. SP P: m = -0.00346, r^2 = 0.35" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.026, r^2 = 0.18" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.02, r^2 = 0.18" [1] "HS CO2 vs. WT FL: m = -0.079, r^2 = 0.03" [1] "LS CO2 vs. WT FL: m = -0.193, r^2 = 0.109" [1] "HS CO2 vs. SP FL: m = 0.085, r^2 = 0.13" [1] "LS CO2 vs. SP FL: m = 0.092, r^2 = 0.076" [1] "HS O2 vs. SLPDIFF: m = -0.653, r^2 = 0.48" [1] "LS O2 vs. SLPDIFF: m = -1.034, r^2 = 0.204" [1] "HS O2 vs. WT P: m = -0.172, r^2 = 0.02" [1] "LS O2 vs. WT P: m = 0.254, r^2 = 0.045" [1] "HS O2 vs. SP P: m = -0.177, r^2 = 0.02" [1] "LS O2 vs. SP P: m = 0.27, r^2 = 0.046" [1] "HS O2 vs. WT FL: m = 20.258, r^2 = 0.12" [1] "LS O2 vs. WT FL: m = 22.72, r^2 = 0.13" [1] "HS O2 vs. SP FL: m = 5.244, r^2 = 0.03" [1] "LS O2 vs. SP FL: m = -3.693, r^2 = 0.011" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 14.6" [1] "Empirical LP O2 lag flow(s): 115.5" [1] "Empirical LP CO2 lag time(s): 6.57" [1] "Empirical LP CO2 lag flow(s): 115.5" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.7" [1] "Median all HS CO2 SD = 0.69" [1] "Median all LS CO2 SD = 0.72" [1] "Median all LT CO2 SD = 0.71" [1] "Median all WT CO2 SD = 0.64" [1] "Median all HS or LS CO2 SD = 0.71" [1] "Median all cal O2 SD = 3.96" [1] "Median all HS O2 SD = 3.96" [1] "Median all LS O2 SD = 3.41" [1] "Median all LT O2 SD = 10.66" [1] "Median all WT O2 SD = 1.75" [1] "Median all HS or LS O2 SD = 3.91" [1] "Median all cal CO2 Slope = -0.07" [1] "Median all HS CO2 Slope = -0.04" [1] "Median all LS CO2 Slope = -0.13" [1] "Median all LT CO2 Slope = -0.14" [1] "Median all WT CO2 Slope = -0.08" [1] "Median all HS or LS CO2 Slope = -0.1" [1] "Median all cal O2 Slope = 6.54" [1] "Median all HS O2 Slope = 9.07" [1] "Median all LS O2 Slope = 5.45" [1] "Median all LT O2 Slope = 20.03" [1] "Median all WT O2 Slope = 0.84" [1] "Median all HS or LS O2 Slope = 6.92" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 31.82 per meg" [1] "Initial O2 Calibration Offset = -71.73 per meg" [1] "SD of O2 Calibration (post-takeoff) = 22.84 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -73.03 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -52.37 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO4-5 inlet volumes" [1] "before any lag: 56203.98 78874.39" [1] "Time lag adjustments = 5 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 37.5 at 103.8 sccm" [1] "Median O2 delay + tlagff = 38.3 at 103.8 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 37.1 at 103.8 sccm" [1] "Median O2 delay from 3-way + tlagff = 37.9 at 103.8 sccm" [1] "after calc and ff lag: 56167.54 78831.65" [1] "2025-05-13 12:18:25 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 4 1-Hz values because of data gaps at:" [1] 165.9125 165.9125 165.9125 165.9125 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 21046 records [1] 1 2102 21046 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27411 [1] "Average Date / Time for slice RF01 = 2011-06-14 18:54:47.8061830997467" [1] "sum(lsel) = 1682" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 77.6944 812.3799 [1] 77.6944 812.3799 [1] 187.6201 922.3056 [1] 6.696857e-03 9.999990e+05 [1] "highestmid = 670.441803" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF01 APO_AO2 range = -367.63,-290.61" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 21046 records [1] 1 2102 21046 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27425 [1] "Average Date / Time for slice RF01 = 2011-06-14 18:54:50.9328579902649" [1] "sum(lsel) = 1683" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 77.6944 812.3799 [1] 77.6944 812.3799 [1] 187.6201 922.3056 [1] 6.696857e-03 9.999990e+05 [1] "highestmid = 670.441803" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF01 O2_AO2 range = -594.75,-496.71" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 21046 records [1] 1 2102 21046 [1] "done reading AO2" [1] 2011 2011 2011 2011 2011 2011 [1] 158 158 158 158 158 158 [1] 61512 61520 61530 61540 61550 61560 [1] "2011-06-07 17:05:12 UTC" "2011-06-07 17:05:20 UTC" [3] "2011-06-07 17:05:30 UTC" "2011-06-07 17:05:40 UTC" [5] "2011-06-07 17:05:50 UTC" "2011-06-07 17:06:00 UTC" [1] NA NA NA NA NA NA [1] 27581 [1] "Average Date / Time for slice RF01 = 2011-06-14 18:54:49.6496436595917" [1] "sum(lsel) = 1684" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 77.6944 812.3799 [1] 77.6944 812.3799 [1] 187.6201 922.3056 [1] 6.696857e-03 9.999990e+05 [1] "highestmid = 670.441803" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO4 RF01 CO2_AO2 range = 387.69,394.45" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 20 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 20 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 20 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 20 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"