[1] "2025-05-13 12:13:18 MDT" options [1,] "file" "100416a" [2,] "flight" "RF11" [3,] "project" "HIPPO3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "100416a" [1] "Reading in flight and plotting intervals" Read 3 records [1] "Reading in /scr/raf/stephens/AO2DAT/100416a.mr" Read 8420 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.24 seconds" [1] "New JOGEST = 2.24 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/100416a.hr" Read 33682 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 12:13:18 PM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.11 O2 = -405.5" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.31 O2 = -1026.5" [1] "position 3 cylinder OK170199 description: LT CO2 = 384.92 O2 = -827.1" [1] "position 4 cylinder OK30054 description: WT CO2 = 374.81 O2 = -621.9" [1] "position 5 cylinder OK30055 description: LP CO2 = 343.66 O2 = -467.4" [1] 337.1114 410.3052 384.9172 374.8114 343.6581 [1] -405.5103 -1026.4586 -827.1269 -621.8517 -467.3897 [1] "Nominal linear calibrations:" [1] "co2scl = 0.961 co2off = 22.66 o2scla = -0.045 o2offa = -30.1" [1] "(dV/V)/(dXO2/XO2) = -4.606" [1] "(dV/V)/d(O2/N2) = -3.642" [1] "Reading in very high resolution timeseries" Read 168400 records [1] 168400 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 12:13:19 PM MDT 2025 done approxing mr variables" [1] "Tue May 13 12:13:20 PM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.642" [1] "o2scaleavenew_drelVdrelP = -4.606" [1] "median(o2scalenew) = -3.646" [1] "Empirical dV/V vs dP/P relationship =-3.495, r^2 =0.104, damping =0.759" [1] "Tue May 13 12:13:20 PM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 8418 $icochar [1] "0" "0" "106.959" $ecochar [1] "367" "106.74701" "367" $flag [1] "all" "LP" "LP" $ico2 [1] 0.000 0.000 106.959 $eco2 [1] 367.000 106.747 367.000 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 8417 8417 106.959 7.457834 0.00345385 0.00936760 0.00934850 8417 8418 8418 106.959 7.470616 0.00419375 0.00939475 0.00939675 8418 8419 8419 106.959 7.457129 0.00382915 0.00939030 0.00937550 8419 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 8417 10.5 1.00 27.00 8750.50 1 7.459752 7.460698 8418 10.5 4.75 27.75 2196.75 -1 7.472301 7.473451 8419 10.5 6.00 28.00 25.50 1 7.458932 7.459981 vuvsigpdprcorr 8417 7.458133 8418 7.470875 8419 7.457410 [1] 0.9589656 0.9590023 0.9590336 [,1] [,2] [,3] [1,] 0.958978 1 1 [2,] 0.958997 -1 1 [3,] 0.959003 -1 6 [4,] 0.959009 -1 6 [5,] 0.959015 -1 6 [6,] 0.959027 1 6 [7,] 0.959034 1 6 [8,] 0.959040 1 6 [9,] 0.959046 1 6 [10,] 0.959059 -1 6 [11,] 0.959066 -1 6 [12,] 0.959073 -1 6 [13,] 0.959078 -1 6 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 8418 $icochar [1] "0" "0" "106.959" $ecochar [1] "367" "106.74701" "367" $flag [1] "all" "LP" "LP" $ico2 [1] 0.000 0.000 106.959 $eco2 [1] 367.000 106.747 367.000 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 8417 8417 106.959 7.457834 0.00345385 0.00936760 0.00934850 8417 8418 8418 106.959 7.470616 0.00419375 0.00939475 0.00939675 8418 8419 8419 106.959 7.457129 0.00382915 0.00939030 0.00937550 8419 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 8417 10.5 1.00 27.00 8750.50 1 7.459752 7.460698 8418 10.5 4.75 27.75 2196.75 -1 7.472301 7.473451 8419 10.5 6.00 28.00 25.50 1 7.458932 7.459981 vuvsigpdprcorr 8417 7.458133 8418 7.470875 8419 7.457410 [1] 0.9589656 0.9590023 0.9590336 [,1] [,2] [,3] [1,] 0.958978 1 1 [2,] 0.958997 -1 1 [3,] 0.959003 -1 6 [4,] 0.959009 -1 6 [5,] 0.959015 -1 6 [6,] 0.959027 1 6 [7,] 0.959034 1 6 [8,] 0.959040 1 6 [9,] 0.959046 1 6 [10,] 0.959059 -1 6 [11,] 0.959066 -1 6 [12,] 0.959073 -1 6 [13,] 0.959078 -1 6 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 12:13:38 PM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 12:13:38 PM MDT 2025 done recreating mr o2diffs" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 400.275 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 156.422 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 159.198 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 24.019 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 29 [1] 104 [1] 117 [1] 117 [1] 117 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 64 106.7356 1582.7888 1001551.7 -1 [2,] 65 106.7356 1187.1779 999938.7 1 [3,] 66 106.7356 780.0777 1000689.9 -1 [4,] 124 106.7374 854.1736 999274.2 -1 [5,] 125 106.7374 1929.7170 998365.5 1 [6,] 126 106.7375 3024.7318 1001403.1 -1 [7,] 184 106.7392 3076.5704 1000066.5 -1 [8,] 185 106.7393 2762.2403 996986.3 1 [9,] 186 106.7393 2436.6405 999409.8 -1 [10,] 244 106.7411 2205.5884 997776.0 -1 [11,] 245 106.7411 1632.4108 995576.3 1 [12,] 246 106.7411 1058.1561 996599.0 -1 [13,] 456 106.7470 988.1566 994842.2 -1 [14,] 457 106.7470 1293.2893 993904.6 1 [15,] 458 106.7470 1680.3576 995537.3 -1 [16,] 461 106.7471 1821.6226 993822.6 1 [17,] 462 106.7471 1829.4193 995801.4 -1 [18,] 463 106.7472 1906.9372 994070.4 1 [19,] 465 106.7472 1672.6654 994234.4 1 [20,] 466 106.7472 1640.1929 995878.8 -1 [21,] 467 106.7473 1748.2497 993927.4 1 [22,] 475 106.7475 1914.3268 993691.7 1 [23,] 476 106.7475 2142.6312 995770.5 -1 [24,] 477 106.7475 2433.5086 993470.1 1 [25,] 478 106.7475 2409.9460 996049.4 -1 [26,] 479 106.7476 2217.3669 993702.9 1 [27,] 1208 106.7683 1329.5548 988884.5 -1 [28,] 1210 106.7683 1322.6519 988908.5 -1 [29,] 1211 106.7684 1906.8848 987586.9 1 [30,] 1212 106.7684 2624.8072 990275.3 -1 [31,] 1213 106.7684 3025.4332 987595.4 1 [32,] 1214 106.7685 3179.6926 990777.0 -1 [33,] 1266 106.7699 3221.8853 991379.9 -1 [34,] 1267 106.7700 3104.4280 988174.4 1 [35,] 1268 106.7700 2636.6745 990711.4 -1 [36,] 1269 106.7700 1706.6575 988187.6 1 [37,] 1270 106.7700 903.6052 989081.4 -1 [38,] 2099 106.7917 1236.1104 997544.8 1 [39,] 2100 106.7917 1249.2110 998543.8 -1 [40,] 2101 106.7917 1379.4022 997107.9 1 [41,] 2536 106.8030 1373.0046 1001157.0 -1 [42,] 2540 106.8031 1296.4622 1001064.9 -1 [43,] 2541 106.8031 1022.7275 999740.9 1 [44,] 2542 106.8031 766.7122 1000483.6 -1 [45,] 2606 106.8048 720.8227 1000101.4 -1 [46,] 2607 106.8048 1615.2286 999395.1 1 [47,] 2608 106.8049 2627.7160 1002101.9 -1 [48,] 2610 106.8049 3117.8338 1002453.8 -1 [49,] 2672 106.8065 3249.9982 1002245.1 -1 [50,] 2673 106.8065 3109.0583 998976.3 1 [51,] 2674 106.8065 2679.4200 1001638.8 -1 [52,] 2675 106.8066 2042.2956 998995.8 1 [53,] 2676 106.8066 1554.3126 1000514.4 -1 [54,] 2743 106.8083 1378.2873 998405.6 1 [55,] 2744 106.8084 1428.4838 999717.4 -1 [56,] 2745 106.8084 1526.2285 998180.8 1 [57,] 2913 106.8128 1437.0817 996341.6 1 [58,] 2914 106.8128 1464.1975 997714.9 -1 [59,] 2915 106.8128 1469.1029 996131.6 1 [60,] 3838 106.8377 1136.0232 996002.9 -1 [61,] 3842 106.8378 1156.6901 996124.1 -1 [62,] 3843 106.8378 2105.8495 994972.9 1 [63,] 3844 106.8379 3021.5151 998029.4 -1 [64,] 3900 106.8396 2889.7677 999246.4 -1 [65,] 3901 106.8396 1814.9642 996435.4 1 [66,] 3902 106.8396 856.7845 997314.6 -1 [67,] 3958 106.8413 969.8494 998896.3 -1 [68,] 3959 106.8413 1650.1191 997909.5 1 [69,] 3960 106.8413 2284.6192 1000232.7 -1 [70,] 4014 106.8429 2386.2227 1001571.3 -1 [71,] 4015 106.8430 2287.4521 999124.1 1 [72,] 4016 106.8430 2052.9761 1001066.3 -1 [73,] 4017 106.8430 1637.7352 998962.5 1 [74,] 4018 106.8431 1249.6214 1000255.8 -1 [75,] 5118 106.8724 1164.5442 1009410.2 -1 [76,] 5124 106.8726 840.8079 1009075.1 -1 [77,] 5188 106.8742 729.9514 1009050.6 -1 [78,] 5189 106.8742 1281.5098 1008298.1 1 [79,] 5190 106.8743 2010.0435 1010467.0 -1 [80,] 5191 106.8743 2671.0051 1008322.3 1 [81,] 5192 106.8743 3070.8724 1011464.0 -1 [82,] 5256 106.8760 3220.7793 1011690.2 -1 [83,] 5257 106.8760 2590.3361 1008417.1 1 [84,] 5258 106.8760 1901.5019 1010323.8 -1 [85,] 6442 106.9071 1152.3323 1005252.1 -1 [86,] 6446 106.9072 1133.1394 1005200.3 -1 [87,] 6447 106.9073 1847.6029 1004027.8 1 [88,] 6448 106.9073 2624.7749 1006740.3 -1 [89,] 6450 106.9073 3136.6153 1007159.8 -1 [90,] 6512 106.9089 3213.6314 1006916.5 -1 [91,] 6513 106.9090 2658.1056 1003674.8 1 [92,] 6514 106.9090 1927.4056 1005483.1 -1 [93,] 6515 106.9090 1264.5158 1003650.4 1 [94,] 6516 106.9090 854.5051 1004498.9 -1 [95,] 7565 106.9363 1105.8787 1001679.7 1 [96,] 7566 106.9363 1093.3626 1002672.7 -1 [97,] 7567 106.9364 1152.7035 1001441.7 1 [98,] 7780 106.9419 1303.5662 1001445.0 -1 [99,] 7784 106.9420 1225.3497 1001337.0 -1 [100,] 7785 106.9420 968.3215 1000083.9 1 [101,] 7786 106.9420 748.7435 1000802.0 -1 [102,] 7850 106.9437 764.4304 1000253.3 -1 [103,] 7851 106.9437 1859.3024 999462.1 1 [104,] 7852 106.9437 2953.8343 1002451.1 -1 [105,] 7918 106.9454 2936.8284 1001301.6 -1 [106,] 7920 106.9455 2437.3621 1000814.0 -1 [107,] 7984 106.9471 2386.5706 999563.7 -1 [108,] 7985 106.9472 1855.3658 997146.6 1 [109,] 7986 106.9472 1413.9374 998567.4 -1 [110,] 8057 106.9490 1315.3429 995440.9 1 [111,] 8058 106.9491 1327.3520 996658.1 -1 [112,] 8059 106.9491 1359.7996 995207.2 1 [113,] 8379 106.9578 1542.9341 985646.1 1 [114,] 8380 106.9578 1722.0494 987199.0 -1 [115,] 8381 106.9579 1822.9147 985266.5 1 [116,] 8418 106.9590 1766.8889 985113.9 -1 [117,] 8420 106.9591 1338.0619 984632.8 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 4993 106.8692 9.50597e+11 [2,] 7051 106.9229 9.50597e+11 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 400.275 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 109.771 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 126.446 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 24.019 PER MEG" [1] 337.1114 410.3052 384.9172 374.8114 343.6581 [1] -405.5103 -1026.4586 -827.1269 -621.8517 -467.3897 [1] "Nominal linear calibrations:" [1] "co2scl = 0.961 co2off = 22.66 o2scla = -0.046 o2offa = -30" [1] "(dV/V)/(dXO2/XO2) = -4.587" [1] "(dV/V)/d(O2/N2) = -3.626" [1] "Finding cal and sample periods" [1] "Median Cal: 2.45 minutes" [1] "Average Cal: 2.45 minutes" [1] "Shortest Cal: 2.03 minutes" [1] "Longest Cal: 4.96 minutes" [1] "Removed 1 calibration period(s) with less than 30 seconds of data" [1] "at: 22" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00912" [1] "HS CO2 vs. PACAB: m = -0.0124, r^2 = 0.65" [1] "LS CO2 vs. PACAB: m = -0.00584, r^2 = 0.24" [1] "HS+LS LIH2O vs. PACAB: m = -0.000209" [1] "HS LIH2O vs. PACAB: m = -0.000226, r^2 = 0.96" [1] "LS LIH2O vs. PACAB: m = -0.000191, r^2 = 0.95" [1] "HS+LS CO2 vs. LIH2O: m = 37.9" [1] "HS CO2 vs. LIH2O: m = 52.6, r^2 = 0.64" [1] "LS CO2 vs. LIH2O: m = 23.2, r^2 = 0.12" [1] "APCO2 vs. PACAB: m = -0.0661, r^2 = 0.44" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.087" [1] "HS O2 vs. PACAB: m = -0.0482, r^2 = 0.02" [1] "LS O2 vs. PACAB: m = -0.126, r^2 = 0.34" [1] "HS+LS O2 vs. LIH2O: m = 342" [1] "HS O2 vs. LIH2O: m = 147, r^2 = 0.01" [1] "LS O2 vs. LIH2O: m = 537, r^2 = 0.24" [1] "HS+LS O2 vs. PAO2: m = 0.123" [1] "HS O2 vs. PAO2: m = -14.1, r^2 = 0.18" [1] "LS O2 vs. PAO2: m = 14.4, r^2 = 0.4" [1] "HS+LS O2 vs. TPBOX: m = -0.553" [1] "HS O2 vs. TPBOX: m = -1.25, r^2 = 0.03" [1] "LS O2 vs. TPBOX: m = 0.14, r^2 = 0" [1] "APO vs. PACAB: m = 1.21, r^2 = 0.44" [1] "APO vs. PAO2: m = 58.9, r^2 = 0.26" [1] "APO vs. TPBOX: m = -24.4, r^2 = 0.35" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -5.3, r^2 = 0.09" [1] "LS CO2 vs. LiCor Cell P: m = -0.698, r^2 = 0" [1] "HS CO2 vs. CO2 Vol P: m = 1.9, r^2 = 0.23" [1] "LS CO2 vs. CO2 Vol P: m = 1.33, r^2 = 0.21" [1] "HS CO2 vs. SLOPE: m = -1.82, r^2 = 0.18" [1] "LS CO2 vs. SLOPE: m = -1.19, r^2 = 0.35" [1] "HS O2 vs. O2 Vol P: m = 7.95, r^2 = 0.05" [1] "LS O2 vs. O2 Vol P: m = 6.83, r^2 = 0.13" [1] "HS O2 vs. O2 Cell T: m = -1.58, r^2 = 0.01" [1] "LS O2 vs. O2 Cell T: m = -1.68, r^2 = 0.03" [1] "HS O2 vs. CO2 Vol P: m = 17.4, r^2 = 0.11" [1] "LS O2 vs. CO2 Vol P: m = 17.2, r^2 = 0.46" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 6.26, r^2 = 0.01" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 28.3, r^2 = 0.65" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = 17.4, r^2 = 0.11" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 17.2, r^2 = 0.46" [1] "HS O2 vs. LIH2O: m = 593, r^2 = 0.22" [1] "LS O2 vs. LIH2O: m = 118, r^2 = 0.03" [1] "HS O2 vs. SLOPE: m = -1.89, r^2 = 0.65" [1] "LS O2 vs. SLOPE: m = 0.058, r^2 = 0.02" [1] "HS CO2 vs. Time: m = 20.197, r^2 = 0.85" [1] "LS CO2 vs. Time: m = 21.775, r^2 = 0.88" [1] "HS CO2 vs. Cylinder T: m = -2.577, r^2 = 0.75" [1] "LS CO2 vs. Cylinder T: m = -2.144, r^2 = 0.723" [1] "HS CO2 vs. Regulator T: m = -0.864, r^2 = 0.7" [1] "LS CO2 vs. Regulator T: m = -0.696, r^2 = 0.589" [1] "HS CO2 vs. Ref. Volumes T: m = -0.897, r^2 = 0.2" [1] "LS CO2 vs. Ref. Volumes T: m = -0.318, r^2 = 0.042" [1] "HS CO2 vs. Manifold T: m = -0.819, r^2 = 0.28" [1] "LS CO2 vs. Manifold T: m = -0.366, r^2 = 0.085" [1] "HS CO2 vs. Pump Box T: m = 0.414, r^2 = 0.37" [1] "LS CO2 vs. Pump Box T: m = 0.026, r^2 = 0.003" [1] "HS O2 vs. Cylinder T: m = -27.556, r^2 = 0.48" [1] "LS O2 vs. Cylinder T: m = 0.417, r^2 = 0" [1] "HS O2 vs. Regulator T: m = -11.657, r^2 = 0.71" [1] "LS O2 vs. Regulator T: m = 2.092, r^2 = 0.069" [1] "HS O2 vs. Ref. Volumes T: m = -1.521, r^2 = 0" [1] "LS O2 vs. Ref. Volumes T: m = 0.874, r^2 = 0.004" [1] "HS O2 vs. Manifold T: m = -1.442, r^2 = 0" [1] "LS O2 vs. Manifold T: m = -1.99, r^2 = 0.033" [1] "HS O2 vs. Pump Box T: m = 1.369, r^2 = 0.02" [1] "LS O2 vs. Pump Box T: m = -0.433, r^2 = 0.009" [1] "HS CO2 vs. WT P: m = -0.019, r^2 = 0.73" [1] "LS CO2 vs. WT P: m = -0.012, r^2 = 0.456" [1] "HS CO2 vs. SP P: m = -0.012, r^2 = 0.79" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.084, r^2 = 0.75" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.101, r^2 = 0.75" [1] "LS CO2 vs. SP P: m = -0.00537, r^2 = 0.25" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.436, r^2 = 0.61" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.45, r^2 = 0.61" [1] "HS CO2 vs. WT FL: m = -0.517, r^2 = 0.44" [1] "LS CO2 vs. WT FL: m = -0.299, r^2 = 0.199" [1] "HS CO2 vs. SP FL: m = 0.922, r^2 = 0.78" [1] "LS CO2 vs. SP FL: m = 0.788, r^2 = 0.743" [1] "HS O2 vs. SLPDIFF: m = -0.944, r^2 = 0.73" [1] "LS O2 vs. SLPDIFF: m = -0.513, r^2 = 0.57" [1] "HS O2 vs. WT P: m = -0.135, r^2 = 0.2" [1] "LS O2 vs. WT P: m = -0.047, r^2 = 0.097" [1] "HS O2 vs. SP P: m = -0.142, r^2 = 0.22" [1] "LS O2 vs. SP P: m = -0.046, r^2 = 0.085" [1] "HS O2 vs. WT FL: m = -2.086, r^2 = 0.04" [1] "LS O2 vs. WT FL: m = -1.214, r^2 = 0.043" [1] "HS O2 vs. SP FL: m = 8.897, r^2 = 0.4" [1] "LS O2 vs. SP FL: m = 3.027, r^2 = 0.143" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 1.38, -2.68" [1] "Empirical LP O2 lag flow(s): 101.5, 108.1" [1] "Empirical LP CO2 lag time(s): 3.63, 0.52" [1] "Empirical LP CO2 lag flow(s): 101.5, 108.1" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.69" [1] "Median all HS CO2 SD = 0.69" [1] "Median all LS CO2 SD = 0.67" [1] "Median all LT CO2 SD = 0.72" [1] "Median all WT CO2 SD = 0.72" [1] "Median all HS or LS CO2 SD = 0.68" [1] "Median all cal O2 SD = 2.39" [1] "Median all HS O2 SD = 2.15" [1] "Median all LS O2 SD = 2.95" [1] "Median all LT O2 SD = 1.72" [1] "Median all WT O2 SD = 2.01" [1] "Median all HS or LS O2 SD = 2.38" [1] "Median all cal CO2 Slope = 0.02" [1] "Median all HS CO2 Slope = -0.06" [1] "Median all LS CO2 Slope = 0.02" [1] "Median all LT CO2 Slope = 0.21" [1] "Median all WT CO2 Slope = 0.03" [1] "Median all HS or LS CO2 Slope = 0.02" [1] "Median all cal O2 Slope = 0.87" [1] "Median all HS O2 Slope = -0.02" [1] "Median all LS O2 Slope = 1.1" [1] "Median all LT O2 Slope = 1.1" [1] "Median all WT O2 Slope = 0.26" [1] "Median all HS or LS O2 Slope = 0.73" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 2.65 per meg" [1] "Initial O2 Calibration Offset = 4.84 per meg" [1] "SD of O2 Calibration (post-takeoff) = 2.28 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 4.97 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 4.97 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO3 inlet volumes" [1] "before any lag: 63382.26 82863.56" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 47.5 at 106 sccm" [1] "Median O2 delay + tlagff = 48.4 at 106 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 47.5 at 106 sccm" [1] "Median O2 delay from 3-way + tlagff = 48.4 at 106 sccm" [1] "after calc and ff lag: 63328.87 82814.33" [1] "2025-05-13 12:14:04 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 18241 records [1] 11 1823 18241 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] NA -269.21 -258.26 -240.31 -223.89 -222.66 [1] 22965 [1] "Average Date / Time for slice RF11 = 2010-04-16 20:25:19.1984486579895" [1] "sum(lsel) = 1547" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 32.79742 853.21852 [1] 32.79742 853.21852 [1] 146.7815 967.2026 [1] 6.69600e-03 9.99999e+05 [1] "no level flight between 275 and 375 hPa" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF11 APO_AO2 range = -377.6,-280.67" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 18241 records [1] 11 1823 18241 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] -528.60 -530.63 -517.65 -489.41 -459.65 -452.92 [1] 22974 [1] "Average Date / Time for slice RF11 = 2010-04-16 20:25:24.5736434459686" [1] "sum(lsel) = 1548" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 32.79742 853.21852 [1] 32.79742 853.21852 [1] 146.7815 967.2026 [1] 6.69600e-03 9.99999e+05 [1] "no level flight between 275 and 375 hPa" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF11 O2_AO2 range = -617.64,-471.33" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 18241 records [1] 11 1823 18241 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] NA 399.703 399.111 397.419 394.779 393.928 [1] 24157 [1] "Average Date / Time for slice RF11 = 2010-04-16 20:25:34.6658098697662" [1] "sum(lsel) = 1556" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 32.79742 853.21852 [1] 32.79742 853.21852 [1] 146.7815 967.2026 [1] 6.69600e-03 9.99999e+05 [1] "no level flight between 275 and 375 hPa" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF11 CO2_AO2 range = 385.25,398.69" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "making html" [1] "making index html"