[1] "2025-05-13 11:54:05 MDT" options [1,] "file" "100326a" [2,] "flight" "RF02" [3,] "project" "HIPPO3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "100326a" [1] "Reading in flight and plotting intervals" Read 16 records [1] "Reading in /scr/raf/stephens/AO2DAT/100326a.mr" Read 12328 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.51 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.53 seconds" [1] "New JOGEST = 2.53 seconds" [1] "New VALVE SKIP = 24 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/100326a.hr" Read 49314 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 11:54:05 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.1 O2 = -400.6" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.3 O2 = -1021.3" [1] "position 3 cylinder OK170199 description: LT CO2 = 384.92 O2 = -816.2" [1] "position 4 cylinder OK30053 description: WT CO2 = 374.85 O2 = -619.7" [1] "position 5 cylinder OK30055 description: LP CO2 = 343.66 O2 = -461" [1] 337.1015 410.3024 384.9182 374.8454 343.6587 [1] -400.5832 -1021.2740 -816.2247 -619.6580 -460.9883 [1] "Nominal linear calibrations:" [1] "co2scl = 0.968 co2off = 23.7 o2scla = -0.049 o2offa = -20.6" [1] "(dV/V)/(dXO2/XO2) = -4.284" [1] "(dV/V)/d(O2/N2) = -3.387" [1] "Reading in very high resolution timeseries" Read 246560 records [1] 246560 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:54:05 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:54:07 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.387" [1] "o2scaleavenew_drelVdrelP = -4.284" [1] "median(o2scalenew) = -3.396" [1] "Empirical dV/V vs dP/P relationship =-3.647, r^2 =0.275, damping =0.851" [1] "Tue May 13 11:54:07 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:54:40 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 9.88416000009238 SECONDS" [1] "Tue May 13 11:54:40 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 2 medium-rate record(s) with accumulation errors" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -348.028 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 127.246 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 127.03 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -28.115 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 9 [1] 117 [1] 135 [1] 135 [1] 136 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 64 85.74130 1667.8181 959044.7 -1 [2,] 65 85.74133 1283.2715 957432.0 1 [3,] 66 85.74137 898.8016 958282.8 -1 [4,] 124 85.74314 978.9152 957946.9 -1 [5,] 125 85.74317 1987.1385 956972.1 1 [6,] 126 85.74320 3023.3490 959902.6 -1 [7,] 184 85.74498 3093.6161 960091.7 -1 [8,] 185 85.74501 2771.2965 957133.4 1 [9,] 186 85.74504 2458.4700 959504.2 -1 [10,] 244 85.74680 2234.2639 959692.2 -1 [11,] 245 85.74683 1671.3832 957585.2 1 [12,] 246 85.74686 1122.4257 958675.8 -1 [13,] 336 85.74962 1029.8597 959361.2 -1 [14,] 337 85.74966 1498.7159 958398.0 1 [15,] 338 85.74968 1937.2942 960284.3 -1 [16,] 343 85.74984 1615.3618 958173.0 1 [17,] 344 85.74988 1575.8702 959508.6 -1 [18,] 345 85.74991 1687.3312 957808.4 1 [19,] 1176 85.77402 1516.1924 963612.2 -1 [20,] 1180 85.77413 1537.7532 963689.1 -1 [21,] 1181 85.77416 2282.2336 962196.4 1 [22,] 1182 85.77419 3028.3681 965138.4 -1 [23,] 1238 85.77583 3190.4907 965925.7 -1 [24,] 1239 85.77586 2719.8099 962839.6 1 [25,] 1240 85.77589 2049.4185 964726.0 -1 [26,] 1241 85.77592 1406.0380 962855.3 1 [27,] 1242 85.77594 968.4067 963800.6 -1 [28,] 1295 85.77756 817.4400 964311.9 -1 [29,] 1296 85.77759 1047.7250 963539.5 1 [30,] 1297 85.77762 1304.9020 964861.5 -1 [31,] 2315 85.80876 1482.5401 969095.5 -1 [32,] 2319 85.80888 1032.3648 968755.0 -1 [33,] 2373 85.81054 815.0616 969529.9 -1 [34,] 2374 85.81057 1569.6767 968758.2 1 [35,] 2375 85.81060 2406.3090 971205.4 -1 [36,] 2376 85.81063 2907.1851 968837.0 1 [37,] 2377 85.81067 3093.4614 971873.2 -1 [38,] 2429 85.81225 3181.5415 972611.2 -1 [39,] 2430 85.81228 2709.9941 969512.1 1 [40,] 2431 85.81231 2135.7335 971567.0 -1 [41,] 3557 85.84344 1193.0996 977344.5 -1 [42,] 3561 85.84357 1327.1404 977519.0 -1 [43,] 3562 85.84360 2162.5125 976216.4 1 [44,] 3563 85.84363 3017.3492 979220.2 -1 [45,] 3617 85.84529 2798.4438 979802.2 -1 [46,] 3618 85.84532 1872.2040 977126.0 1 [47,] 3619 85.84535 958.6681 978088.6 -1 [48,] 3673 85.84700 1002.7160 979681.7 -1 [49,] 3674 85.84704 1668.8008 978687.2 1 [50,] 3675 85.84707 2269.7628 980967.1 -1 [51,] 3729 85.84872 2208.7094 982557.0 -1 [52,] 3730 85.84875 1871.2121 980450.3 1 [53,] 3731 85.84878 1535.3227 982005.4 -1 [54,] 4789 85.87827 1271.9058 986721.1 -1 [55,] 4795 85.87845 830.3551 986280.6 -1 [56,] 4853 85.88022 951.7545 987510.8 -1 [57,] 4854 85.88026 1976.1589 986572.4 1 [58,] 4855 85.88029 2987.6889 989568.7 -1 [59,] 4913 85.88204 3074.0863 991250.6 -1 [60,] 4914 85.88208 2399.5651 988237.3 1 [61,] 4915 85.88211 1805.5436 990067.7 -1 [62,] 5961 85.91300 1226.0574 996683.4 -1 [63,] 5965 85.91310 1208.9530 996732.9 -1 [64,] 5966 85.91312 1811.8438 995512.6 1 [65,] 5967 85.91315 2515.9700 998107.4 -1 [66,] 5969 85.91320 3044.8734 998584.8 -1 [67,] 6033 85.91483 3139.3731 999693.1 -1 [68,] 6034 85.91486 2252.8442 996570.5 1 [69,] 6035 85.91488 1324.6570 997847.0 -1 [70,] 6037 85.91493 926.9295 997521.3 -1 [71,] 6101 85.91655 815.1597 998726.8 -1 [72,] 6102 85.91658 1061.3674 997934.5 1 [73,] 6103 85.91660 1325.9804 999334.8 -1 [74,] 7317 85.95089 1335.0506 1008646.6 -1 [75,] 7321 85.95102 960.1266 1008290.6 -1 [76,] 7377 85.95264 823.2436 1008596.4 -1 [77,] 7378 85.95267 1472.6929 1007765.4 1 [78,] 7379 85.95270 2273.7056 1010200.3 -1 [79,] 7380 85.95273 2818.3309 1007788.0 1 [80,] 7381 85.95276 3072.9050 1010921.3 -1 [81,] 7437 85.95438 2725.1790 1010952.9 -1 [82,] 7439 85.95445 2405.8425 1010679.3 -1 [83,] 7493 85.95601 2376.4459 1010905.2 -1 [84,] 7494 85.95604 2088.2420 1008507.4 1 [85,] 7495 85.95606 1735.9389 1010246.3 -1 [86,] 8511 85.98549 1209.8859 1023896.5 -1 [87,] 8515 85.98559 1401.3391 1024243.4 -1 [88,] 8516 85.98562 2237.9610 1022776.8 1 [89,] 8517 85.98565 3013.2056 1025911.0 -1 [90,] 8577 85.98720 3175.4733 1027760.4 -1 [91,] 8578 85.98723 2179.4182 1024500.6 1 [92,] 8579 85.98725 1170.1214 1025701.2 -1 [93,] 9849 86.02020 1188.3278 1036307.4 -1 [94,] 9855 86.02036 959.7105 1036067.7 -1 [95,] 9872 86.02088 852.6777 1035103.5 1 [96,] 9873 86.02091 897.6693 1035916.8 -1 [97,] 9874 86.02094 931.3171 1034899.0 1 [98,] 9919 86.02232 861.6177 1036000.5 -1 [99,] 9920 86.02235 1806.3838 1035111.3 1 [100,] 9921 86.02238 2740.7416 1038033.1 -1 [101,] 9923 86.02244 3128.8415 1038417.4 -1 [102,] 9987 86.02438 2951.4125 1038466.1 -1 [103,] 9988 86.02441 2399.7096 1035437.9 1 [104,] 9989 86.02444 1834.5497 1037357.0 -1 [105,] 10320 86.03560 1245.8374 1035948.5 1 [106,] 10321 86.03563 1316.4343 1037212.0 -1 [107,] 10322 86.03566 1293.4122 1035692.1 1 [108,] 10971 86.05491 1439.4090 1037698.0 -1 [109,] 10972 86.05494 2247.4480 1036149.1 1 [110,] 10973 86.05496 3049.2144 1039368.9 -1 [111,] 11031 86.05646 3209.4660 1039953.5 -1 [112,] 11032 86.05648 3126.7263 1036581.5 1 [113,] 11033 86.05651 2698.7427 1039332.8 -1 [114,] 11034 86.05654 1827.8229 1036589.0 1 [115,] 11035 86.05656 1060.7016 1037700.5 -1 [116,] 11093 86.05807 885.5488 1037889.8 -1 [117,] 11094 86.05809 1055.5661 1036963.7 1 [118,] 11095 86.05812 1409.1305 1038515.7 -1 [119,] 11096 86.05814 1898.4502 1036984.8 1 [120,] 11097 86.05817 2308.9799 1039416.5 -1 [121,] 11157 86.05985 2180.8497 1039373.9 -1 [122,] 11158 86.05988 1824.7226 1037151.0 1 [123,] 11159 86.05991 1504.4501 1038708.5 -1 [124,] 12203 86.09066 1555.2650 1025732.9 -1 [125,] 12207 86.09079 1472.4732 1025653.4 -1 [126,] 12208 86.09082 1203.2684 1024162.3 1 [127,] 12209 86.09085 912.6967 1025091.4 -1 [128,] 12263 86.09248 822.2450 1024973.2 -1 [129,] 12264 86.09251 1493.2213 1024109.9 1 [130,] 12265 86.09254 2321.1421 1026597.6 -1 [131,] 12266 86.09257 2837.9209 1024107.3 1 [132,] 12267 86.09260 3040.9265 1027270.8 -1 [133,] 12321 86.09420 2999.8049 1027253.6 -1 [134,] 12322 86.09424 2117.9862 1024191.9 1 [135,] 12323 86.09427 1278.5698 1025491.5 -1 [136,] 12326 86.09436 2619.8446 1024170.5 1 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -348.028 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 77.195 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 69.772 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -28.115 PER MEG" [1] 86.02 367.00 [1] "Screened 2485 O2 values from screenboth period 86.02 to 367" [1] "Screened 2485 CO2 values from screenboth period 86.02 to 367" [1] 337.1015 410.3024 384.9182 374.8454 343.6587 [1] -400.5832 -1021.2740 -816.2247 -619.6580 -460.9883 [1] "Nominal linear calibrations:" [1] "co2scl = 0.967 co2off = 24.66 o2scla = -0.049 o2offa = -21.6" [1] "(dV/V)/(dXO2/XO2) = -4.292" [1] "(dV/V)/d(O2/N2) = -3.393" [1] "Finding cal and sample periods" [1] "Median Cal: 2.44 minutes" [1] "Average Cal: 2.49 minutes" [1] "Shortest Cal: 2.27 minutes" [1] "Longest Cal: 4.2 minutes" [1] "Removed 8 calibration period(s) with less than 30 seconds of data" [1] "from: 23" [1] "to: 30" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.0101" [1] "HS CO2 vs. PACAB: m = -0.00813, r^2 = 0.74" [1] "LS CO2 vs. PACAB: m = -0.0121, r^2 = 0.91" [1] "HS+LS LIH2O vs. PACAB: m = -0.000118" [1] "HS LIH2O vs. PACAB: m = -0.000101, r^2 = 0.82" [1] "LS LIH2O vs. PACAB: m = -0.000134, r^2 = 0.73" [1] "HS+LS CO2 vs. LIH2O: m = 68.1" [1] "HS CO2 vs. LIH2O: m = 77.5, r^2 = 0.79" [1] "LS CO2 vs. LIH2O: m = 58.8, r^2 = 0.44" [1] "APCO2 vs. PACAB: m = -0.0702, r^2 = 0.64" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.195" [1] "HS O2 vs. PACAB: m = -0.351, r^2 = 0.73" [1] "LS O2 vs. PACAB: m = -0.0396, r^2 = 0.06" [1] "HS+LS O2 vs. LIH2O: m = 1170" [1] "HS O2 vs. LIH2O: m = 2200, r^2 = 0.36" [1] "LS O2 vs. LIH2O: m = 135, r^2 = 0.01" [1] "HS+LS O2 vs. PAO2: m = -23.4" [1] "HS O2 vs. PAO2: m = -44.1, r^2 = 0.9" [1] "LS O2 vs. PAO2: m = -2.59, r^2 = 0.01" [1] "HS+LS O2 vs. TPBOX: m = 5.19" [1] "HS O2 vs. TPBOX: m = 8.04, r^2 = 0.27" [1] "LS O2 vs. TPBOX: m = 2.34, r^2 = 0.06" [1] "APO vs. PACAB: m = 1.21, r^2 = 0.64" [1] "APO vs. PAO2: m = 48.9, r^2 = 0.07" [1] "APO vs. TPBOX: m = -19.9, r^2 = 0.08" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -19.3, r^2 = 0.78" [1] "LS CO2 vs. LiCor Cell P: m = -17.9, r^2 = 0.69" [1] "HS CO2 vs. CO2 Vol P: m = -2.82, r^2 = 0.64" [1] "LS CO2 vs. CO2 Vol P: m = -2.85, r^2 = 0.55" [1] "HS CO2 vs. SLOPE: m = 1.49, r^2 = 0.47" [1] "LS CO2 vs. SLOPE: m = -1.38, r^2 = 0.75" [1] "HS O2 vs. O2 Vol P: m = -42, r^2 = 0.93" [1] "LS O2 vs. O2 Vol P: m = -16.3, r^2 = 0.12" [1] "HS O2 vs. O2 Cell T: m = 16.4, r^2 = 0.91" [1] "LS O2 vs. O2 Cell T: m = 5.69, r^2 = 0.09" [1] "HS O2 vs. CO2 Vol P: m = -26.3, r^2 = 0.2" [1] "LS O2 vs. CO2 Vol P: m = 14.9, r^2 = 0.05" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.587, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -31.2, r^2 = 0.18" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -26.3, r^2 = 0.2" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 14.9, r^2 = 0.05" [1] "HS O2 vs. LIH2O: m = 2430, r^2 = 0.49" [1] "LS O2 vs. LIH2O: m = 344, r^2 = 0.03" [1] "HS O2 vs. SLOPE: m = 0.47, r^2 = 0.23" [1] "LS O2 vs. SLOPE: m = 0.326, r^2 = 0.03" [1] "HS CO2 vs. Time: m = 18.29, r^2 = 0.94" [1] "LS CO2 vs. Time: m = 19.77, r^2 = 0.96" [1] "HS CO2 vs. Cylinder T: m = -1.388, r^2 = 0.86" [1] "LS CO2 vs. Cylinder T: m = -1.356, r^2 = 0.784" [1] "HS CO2 vs. Regulator T: m = -0.534, r^2 = 0.72" [1] "LS CO2 vs. Regulator T: m = -0.432, r^2 = 0.487" [1] "HS CO2 vs. Ref. Volumes T: m = -1.187, r^2 = 0.19" [1] "LS CO2 vs. Ref. Volumes T: m = -1.67, r^2 = 0.379" [1] "HS CO2 vs. Manifold T: m = 0.345, r^2 = 0.14" [1] "LS CO2 vs. Manifold T: m = 0.077, r^2 = 0.006" [1] "HS CO2 vs. Pump Box T: m = -0.291, r^2 = 0.2" [1] "LS CO2 vs. Pump Box T: m = -0.322, r^2 = 0.272" [1] "HS O2 vs. Cylinder T: m = 2.443, r^2 = 0.01" [1] "LS O2 vs. Cylinder T: m = 14.647, r^2 = 0.292" [1] "HS O2 vs. Regulator T: m = 3.087, r^2 = 0.09" [1] "LS O2 vs. Regulator T: m = 7.753, r^2 = 0.502" [1] "HS O2 vs. Ref. Volumes T: m = 34.069, r^2 = 0.58" [1] "LS O2 vs. Ref. Volumes T: m = 29.071, r^2 = 0.367" [1] "HS O2 vs. Manifold T: m = 14.447, r^2 = 0.85" [1] "LS O2 vs. Manifold T: m = 4.559, r^2 = 0.071" [1] "HS O2 vs. Pump Box T: m = 6.428, r^2 = 0.35" [1] "LS O2 vs. Pump Box T: m = 6.311, r^2 = 0.334" [1] "HS CO2 vs. WT P: m = -0.011, r^2 = 0.25" [1] "LS CO2 vs. WT P: m = -0.009, r^2 = 0.258" [1] "HS CO2 vs. SP P: m = -0.0108, r^2 = 0.79" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.072, r^2 = 0.23" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.081, r^2 = 0.23" [1] "LS CO2 vs. SP P: m = -0.0085, r^2 = 0.84" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.022, r^2 = 0.21" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.03, r^2 = 0.21" [1] "HS CO2 vs. WT FL: m = -0.578, r^2 = 0.35" [1] "LS CO2 vs. WT FL: m = -0.686, r^2 = 0.341" [1] "HS CO2 vs. SP FL: m = 0.092, r^2 = 0.03" [1] "LS CO2 vs. SP FL: m = 0.113, r^2 = 0.062" [1] "HS O2 vs. SLPDIFF: m = -0.25, r^2 = 0.21" [1] "LS O2 vs. SLPDIFF: m = 0.228, r^2 = 0.025" [1] "HS O2 vs. WT P: m = -0.307, r^2 = 0.67" [1] "LS O2 vs. WT P: m = -0.03, r^2 = 0.009" [1] "HS O2 vs. SP P: m = -0.333, r^2 = 0.72" [1] "LS O2 vs. SP P: m = -0.038, r^2 = 0.013" [1] "HS O2 vs. WT FL: m = 10.801, r^2 = 0.44" [1] "LS O2 vs. WT FL: m = 13.103, r^2 = 0.398" [1] "HS O2 vs. SP FL: m = 8.118, r^2 = 0.91" [1] "LS O2 vs. SP FL: m = 1.956, r^2 = 0.059" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 3.89" [1] "Empirical LP O2 lag flow(s): 103.1" [1] "Empirical LP CO2 lag time(s): 9.16" [1] "Empirical LP CO2 lag flow(s): 103.1" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.68" [1] "Median all HS CO2 SD = 0.68" [1] "Median all LS CO2 SD = 0.67" [1] "Median all LT CO2 SD = 0.71" [1] "Median all WT CO2 SD = 0.76" [1] "Median all HS or LS CO2 SD = 0.68" [1] "Median all cal O2 SD = 2.88" [1] "Median all HS O2 SD = 2.98" [1] "Median all LS O2 SD = 2.79" [1] "Median all LT O2 SD = 3" [1] "Median all WT O2 SD = 2.09" [1] "Median all HS or LS O2 SD = 2.82" [1] "Median all cal CO2 Slope = -0.01" [1] "Median all HS CO2 Slope = 0.06" [1] "Median all LS CO2 Slope = 0.03" [1] "Median all LT CO2 Slope = -0.08" [1] "Median all WT CO2 Slope = 0.16" [1] "Median all HS or LS CO2 Slope = 0.03" [1] "Median all cal O2 Slope = 0.56" [1] "Median all HS O2 Slope = 0.53" [1] "Median all LS O2 Slope = 0.56" [1] "Median all LT O2 Slope = 1.32" [1] "Median all WT O2 Slope = 1.17" [1] "Median all HS or LS O2 Slope = 0.55" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 4.75 per meg" [1] "Initial O2 Calibration Offset = -8.38 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.18 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -9.23 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -9.23 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO3 inlet volumes" [1] "before any lag: 63880.19 94552.36" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 50.8 at 101.4 sccm" [1] "Median O2 delay + tlagff = 51.7 at 101.4 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 49.6 at 101.4 sccm" [1] "Median O2 delay from 3-way + tlagff = 50.5 at 101.4 sccm" [1] "after calc and ff lag: 63827.64 94498.79" [1] "2025-05-13 11:55:23 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 81 1-Hz values because of data gaps at:" [1] 86.02666 86.02667 86.02668 86.02669 86.02670 86.02671 86.02672 86.02674 [9] 86.02675 86.02676 86.02677 86.02678 86.02679 86.02681 86.02682 86.02683 [17] 86.02684 86.02685 86.02686 86.02688 86.02689 86.02690 86.02691 86.02692 [25] 86.02693 86.02694 86.02696 86.02697 86.02698 86.02699 86.02700 86.02701 [33] 86.02703 86.02704 86.02705 86.02706 86.02707 86.02708 86.02709 86.02711 [41] 86.02712 86.02713 86.02714 86.02715 86.02716 86.02718 86.02719 86.02720 [49] 86.02721 86.02722 86.02723 86.02725 86.02726 86.02727 86.02728 86.02729 [57] 86.02730 86.02731 86.02733 86.02734 86.02735 86.02736 86.02737 86.02738 [65] 86.02751 86.02752 86.02753 86.02755 86.02756 86.02757 86.02758 86.02759 [73] 86.02760 86.02762 86.02763 86.02764 86.02765 86.02766 86.02767 86.02769 [81] 86.02770 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] NA NA NA NA 4.8295294 4.8295294 [7] 4.3234382 -0.8923856 -5.0573982 -4.6767816 -2.5825386 -2.3797061 [13] -1.7297630 -1.7376936 -1.7464263 -0.5515585 -0.5619779 -0.5715201 [19] -1.9582143 -5.8573171 -5.8664136 -5.8757757 -12.4662701 -13.8876415 [25] -13.8913462 -13.8962197 -7.7741881 -7.7792946 -7.7839289 -7.7879345 [31] 4.6287428 4.6242447 4.6190282 4.6147735 2.6799450 2.6750239 [37] 2.6699312 2.6671431 -2.8813758 -2.8858843 -2.8895023 -2.8955261 [43] 4.6377850 4.6316759 4.6266765 4.6212518 2.9574078 2.9530507 [49] 2.9487062 2.9409228 2.5541412 2.5489739 2.5447810 2.5405903 [55] -1.6703050 -1.6753483 -1.6802156 -1.6852129 -0.5616619 -0.5665134 [61] -0.5710961 -0.5755719 -2.8308065 -2.8363497 -2.8399833 -1.5993397 [67] 6.0754913 6.0708514 6.0661566 4.1220066 -3.2833042 -3.2882109 [73] -2.3669496 -1.2211644 0.9986781 -1.3589148 -2.2906939 -3.1491105 [79] -4.0724908 -3.1630324 -3.1630324 -3.0783240 -2.2771654 -2.0462692 [85] -2.0462692 4.9263139 9.6884025 9.5726715 9.5726715 1.1390614 [91] -2.9403115 -3.4540982 -3.4540982 2.3350756 4.1569786 4.7031182 [97] 4.7031182 5.0282274 4.0558787 3.9072423 3.9072423 2.3854357 [103] 0.3210445 0.3210445 0.2996037 7.8243796 5.8309043 5.6866568 [109] 5.6866568 1.9142739 1.1108301 0.9826972 0.9826972 2.4254474 [115] 4.8796052 7.5803497 17.4941477 12.3181029 8.4137419 3.5470895 [121] 3.5470895 3.9461282 3.8208040 3.4669265 3.4669265 5.0042654 [127] 4.8830495 4.7198503 4.7198503 8.2928797 8.2928797 2.6820676 [133] 2.6820676 1.8230281 -0.5778852 -3.9455852 -3.9455852 -13.0263449 [139] -10.7757833 -3.0633844 -3.0633844 -4.6667735 -7.3712701 -11.2164480 [145] -11.7365543 -10.1541038 -9.4737260 -7.5854594 -6.7513148 -10.9117141 [151] -11.3985859 -12.4016250 -13.0497304 -8.4229708 -7.9569643 -6.8071038 [157] -6.6081322 -5.9607334 -5.6151827 -5.1497711 -3.8488381 -2.2845998 [163] -0.7716490 0.2885539 -0.3296302 -1.6903228 -6.9204714 -14.2202309 [169] -13.1985103 -12.8514824 -11.9914255 -10.0083423 -8.7760150 -8.3080078 [175] -7.5863925 -6.1892922 -11.1209836 -13.5982308 -14.2653632 -16.1462217 [181] -13.0291608 -11.6348367 -8.2659560 -4.2430130 -5.1711458 -5.1711458 [187] -4.4071454 -3.2245446 -1.7307505 -1.7307505 -2.2713352 -3.3332103 [193] -3.7953115 -3.7953115 -2.4803115 -0.2461070 -0.4656837 -0.4656837 [199] -4.7006745 -10.5459694 -11.1154153 -11.1154153 -6.8195623 -3.0213582 [205] -8.5731071 -8.5731071 -7.3513899 -6.7903021 -2.9712929 -2.9712929 [211] -8.6308530 -15.4408765 -8.7029339 -8.7029339 -5.0581596 -0.1219091 [217] -6.9772701 -7.4396056 -10.8577155 -14.9783761 -15.8505753 -15.4868454 [223] -12.1925178 -8.1292879 -0.8105379 -0.8105379 -2.9528984 -4.9989509 [229] -0.7192514 -0.7527415 -0.9262351 -4.7523962 -8.9012573 -9.2742353 [235] -9.8083007 -8.4720509 -7.4536845 -7.9444604 -9.3217798 -6.9242371 [241] -6.2029491 -6.5663141 -7.4942493 -7.0332501 -6.7241710 -3.8992225 [247] -0.1920637 3.7442886 4.9174070 4.8993399 4.8820150 1.1624973 [253] 0.9684665 0.6450331 0.3893223 -2.5162031 -2.5162031 -6.7641142 [259] -8.0621952 -12.3057993 -12.3057993 -8.3985246 -5.9688870 3.0374557 [265] 3.0374557 2.6695514 2.0510130 1.9426733 1.9426733 NA [271] NA NA NA NA NA NA [277] NA NA NA NA NA 1.2383192 [283] 6.5887054 1.0503212 -0.5396535 1.1333859 2.4414867 [1] 51.61588 56.31653 60.53400 65.63689 69.04594 70.57949 72.30042 [8] 75.26887 76.51877 78.34900 81.24104 83.90612 87.21982 90.96926 [15] 95.09791 100.60053 105.52663 110.03800 114.97282 118.72351 123.02416 [22] 127.45037 130.90392 133.09890 134.85041 137.15452 139.66908 142.08329 [29] 144.27432 146.16809 148.18319 150.30981 152.77606 154.78760 156.54527 [36] 158.87191 161.27962 162.59777 165.47658 167.60813 169.31864 172.16659 [43] 174.67323 177.56153 179.92511 182.48983 184.86580 186.92579 188.97978 [50] 192.65959 195.32245 197.76543 199.74776 201.72903 203.96816 206.35256 [57] 208.65370 211.01632 213.37794 215.67166 217.83827 219.95432 222.65654 [64] 225.27728 226.99515 229.32543 231.68664 233.88026 236.09987 238.49310 [71] 240.70915 243.02893 245.26001 247.62240 249.38057 250.79050 252.82878 [78] 254.76033 256.45762 258.23091 259.94046 261.50935 263.52264 265.37850 [85] 267.06545 269.11786 271.24875 273.22226 275.06959 276.62396 278.58211 [92] 280.27464 281.95519 283.85541 285.42125 287.24092 289.07197 290.79626 [99] 292.49517 294.22306 295.98074 297.79769 299.53754 301.38429 303.12283 [106] 304.93242 306.47375 308.18121 309.84973 312.12639 313.77858 315.51031 [113] 317.00719 318.81199 320.52341 322.40214 323.95948 325.71036 327.53800 [120] 328.99381 330.50589 332.10527 334.15980 335.63623 337.65304 339.28690 [127] 340.91350 342.51881 344.08737 345.55324 347.04945 348.98318 350.40999 [134] 352.62821 354.12423 355.65446 357.27947 358.74662 360.46348 362.16233 [141] 363.73487 365.17023 366.87450 368.31702 369.75357 371.42625 372.59954 [148] 374.27175 375.69187 377.24067 378.83299 380.37919 382.07903 383.56006 [155] 385.00549 386.88046 388.42657 390.24601 391.78036 393.29412 394.74870 [162] 396.35948 398.00189 399.46279 400.85266 402.57119 404.12499 405.65212 [169] 407.21324 408.67972 409.98650 411.57439 413.07250 414.67075 416.11898 [176] 417.56987 419.19047 420.71166 422.10268 423.79627 425.30680 427.01409 [183] 428.43521 429.94637 431.40253 432.88532 434.31905 435.91414 437.38471 [190] 438.90800 440.36978 441.88333 443.20822 444.74879 446.05683 447.52276 [197] 449.02350 450.26574 452.02696 453.29593 454.75926 456.22089 457.68551 [204] 459.07522 460.68101 462.25275 463.65956 465.06664 466.35908 467.81521 [211] 469.16632 470.59867 471.86715 473.40420 474.78652 476.35609 477.58474 [218] 479.02327 480.32682 481.74022 483.12940 484.59707 485.85800 487.22976 [225] 488.58586 489.84702 491.14809 492.61842 493.99934 495.47265 496.90151 [232] 498.14096 499.35895 500.74760 502.05569 503.44577 504.88265 506.16616 [239] 507.44113 508.77077 510.05718 511.32702 512.73709 513.99994 515.35982 [246] 516.58775 517.97089 519.17883 520.46907 521.82375 523.12302 524.32467 [253] 525.85678 527.17954 528.43029 529.66144 531.02765 532.22425 533.48782 [260] 534.67155 535.97847 537.23706 538.35470 539.63813 540.75649 542.01264 [267] 543.21749 544.50493 545.81921 546.80624 548.14917 549.44235 550.46450 [274] 551.08467 551.16942 550.89601 550.06397 549.00021 547.92174 547.08708 [281] 546.65058 546.46401 546.53617 546.49559 546.52445 546.47113 546.43429 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 29446 records [1] 2 2944 29446 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] NA -269.21 -258.26 -240.31 -223.89 -222.66 [1] 22476 [1] "Average Date / Time for slice RF02 = 2010-03-26 21:24:38.383359670639" [1] "sum(lsel) = 1899" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -7.526306 838.444778 [1] -7.526306 838.444778 [1] 161.5552 1007.5263 [1] 8.579143e-03 9.999990e+05 [1] "highestmid = 670.493591" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF02 APO_AO2 range = -331.93,-273.27" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 29446 records [1] 2 2944 29446 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] -528.60 -530.63 -517.65 -489.41 -459.65 -452.92 [1] 22483 [1] "Average Date / Time for slice RF02 = 2010-03-26 21:24:38.383359670639" [1] "sum(lsel) = 1899" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -7.526306 838.444778 [1] -7.526306 838.444778 [1] 161.5552 1007.5263 [1] 8.579143e-03 9.999990e+05 [1] "highestmid = 670.493591" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF02 O2_AO2 range = -570.91,-456.2" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 29446 records [1] 2 2944 29446 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] NA 399.703 399.111 397.419 394.779 393.928 [1] 23659 [1] "Average Date / Time for slice RF02 = 2010-03-26 21:24:38.383359670639" [1] "sum(lsel) = 1899" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] -7.526306 838.444778 [1] -7.526306 838.444778 [1] 161.5552 1007.5263 [1] 8.579143e-03 9.999990e+05 [1] "highestmid = 670.493591" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF02 CO2_AO2 range = 382.77,397.21" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 2490 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"