[1] "2025-05-13 11:52:30 MDT" options [1,] "file" "100324a" [2,] "flight" "RF01" [3,] "project" "HIPPO3" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "100324a" [1] "Reading in flight and plotting intervals" Read 11 records [1] "Reading in /scr/raf/stephens/AO2DAT/100324a.mr" Read 10621 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.25 seconds" [1] "New JOGEST = 2.25 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/100324a.hr" Read 42484 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 11:52:30 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.1 O2 = -400.1" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.3 O2 = -1020.8" [1] "position 3 cylinder OK170199 description: LT CO2 = 384.92 O2 = -815.2" [1] "position 4 cylinder OK30053 description: WT CO2 = 374.85 O2 = -618.7" [1] "position 5 cylinder OK30055 description: LP CO2 = 343.66 O2 = -460.4" [1] 337.1005 410.3021 384.9182 374.8457 343.6588 [1] -400.1140 -1020.7802 -815.1864 -618.6600 -460.3786 [1] "Nominal linear calibrations:" [1] "co2scl = 0.964 co2off = 23.3 o2scla = -0.049 o2offa = -18.4" [1] "(dV/V)/(dXO2/XO2) = -4.284" [1] "(dV/V)/d(O2/N2) = -3.387" [1] "Reading in very high resolution timeseries" Read 212420 records [1] 212420 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:52:31 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:52:32 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.387" [1] "o2scaleavenew_drelVdrelP = -4.284" [1] "median(o2scalenew) = -3.401" [1] "Empirical dV/V vs dP/P relationship =-3.07, r^2 =0.024, damping =0.717" [1] "Tue May 13 11:52:32 AM MDT 2025 done redoing corrections" [1] "NON-INTEGER NGAS IN JOGAVES AT:" [1] 1353 $icochar [1] "0" "0" "83.781" "83.85" "83.925" "83.96" [7] "84.0" "19:40:00" "19:46:00" "19:58:00" "20:10:00" $ecochar [1] "84.03269" "83.7808" "83.80" "83.89" "83.97" "84.0" [7] "84.03269" "19:43:00" "19:49:00" "20:02:00" "20:13:00" $flag [1] "all" "LP" "a" "b" "c" "d" "e" "breath" [9] "breath" "breath" "breath" $ico2 [1] 0.00000 0.00000 83.78100 83.85000 83.92500 83.96000 84.00000 83.81944 [9] 83.82361 83.83194 83.84028 $eco2 [1] 84.03269 83.78080 83.80000 83.89000 83.97000 84.00000 84.03269 83.82153 [9] 83.82569 83.83472 83.84236 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1352 1352 83.78078 9.112580 0.00433935 0.00536040 0.00527525 1352 1353 1353 83.78080 9.121560 0.00388750 0.00548575 0.00569325 1353 1354 1354 83.78083 9.111248 0.00431715 0.00547060 0.00549550 1354 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1352 10.5 6.00 8.00 8490.50 1 9.112946 9.114394 1353 10.5 2.25 8.75 2131.75 -1 9.122269 9.123568 1354 10.5 1.00 9.00 25.50 1 9.111711 9.113151 vuvsigpdprcorr 1352 9.112604 1353 9.121735 1354 9.111325 [1] 0.7807757 0.7808017 0.7808273 [,1] [,2] [,3] [1,] 0.780787 1 6 [2,] 0.780796 -1 6 [3,] 0.780801 -1 1 [4,] 0.780807 -1 1 [5,] 0.780813 -1 1 [6,] 0.780821 1 1 [7,] 0.780827 1 1 [8,] 0.780833 1 1 [9,] 0.780838 1 1 [10,] 0.780847 -1 1 [11,] 0.780853 -1 1 [12,] 0.780858 -1 1 [13,] 0.780864 -1 1 [1] "NON-INTEGER NGASNUM IN JOGAVES AT:" [1] 1353 $icochar [1] "0" "0" "83.781" "83.85" "83.925" "83.96" [7] "84.0" "19:40:00" "19:46:00" "19:58:00" "20:10:00" $ecochar [1] "84.03269" "83.7808" "83.80" "83.89" "83.97" "84.0" [7] "84.03269" "19:43:00" "19:49:00" "20:02:00" "20:13:00" $flag [1] "all" "LP" "a" "b" "c" "d" "e" "breath" [9] "breath" "breath" "breath" $ico2 [1] 0.00000 0.00000 83.78100 83.85000 83.92500 83.96000 84.00000 83.81944 [9] 83.82361 83.83194 83.84028 $eco2 [1] 84.03269 83.78080 83.80000 83.89000 83.97000 84.00000 84.03269 83.82153 [9] 83.82569 83.83472 83.84236 jognum vhrtime vuvsigts pdo2sigts pdrefsigts pdrefsigusedts jognumts 1352 1352 83.78078 9.112580 0.00433935 0.00536040 0.00527525 1352 1353 1353 83.78080 9.121560 0.00388750 0.00548575 0.00569325 1353 1354 1354 83.78083 9.111248 0.00431715 0.00547060 0.00549550 1354 jogposts ngasts ngasnumts ngasposts posnegts vuvsiguncorr vuvsigpdcorr 1352 10.5 6.00 8.00 8490.50 1 9.112946 9.114394 1353 10.5 2.25 8.75 2131.75 -1 9.122269 9.123568 1354 10.5 1.00 9.00 25.50 1 9.111711 9.113151 vuvsigpdprcorr 1352 9.112604 1353 9.121735 1354 9.111325 [1] 0.7807757 0.7808017 0.7808273 [,1] [,2] [,3] [1,] 0.780787 1 6 [2,] 0.780796 -1 6 [3,] 0.780801 -1 1 [4,] 0.780807 -1 1 [5,] 0.780813 -1 1 [6,] 0.780821 1 1 [7,] 0.780827 1 1 [8,] 0.780833 1 1 [9,] 0.780838 1 1 [10,] 0.780847 -1 1 [11,] 0.780853 -1 1 [12,] 0.780858 -1 1 [13,] 0.780864 -1 1 [1] "JOGAVES DOES NOT MATCH" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:52:58 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 11:52:58 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 7 medium-rate record(s) > eco or < ico" [1] "from: 10615" [1] "to: 10621" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 917.19 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 974.555 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 973.719 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.636 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 15 [1] 100 [1] 116 [1] 116 [1] 116 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 2 83.74072 1776.7411 974649.9 1 [2,] 3 83.74077 1779.6287 976569.7 -1 [3,] 4 83.74080 1777.9461 974891.6 1 [4,] 65 83.74261 1239.7688 980187.7 -1 [5,] 123 83.74435 1148.3096 982755.5 -1 [6,] 124 83.74438 2167.4406 981615.7 1 [7,] 125 83.74441 3098.9860 984731.7 -1 [8,] 181 83.74594 3240.6471 986609.4 -1 [9,] 182 83.74597 2924.4522 983426.4 1 [10,] 183 83.74600 2564.4186 985984.6 -1 [11,] 241 83.74776 2279.4875 987448.2 -1 [12,] 242 83.74779 1799.8923 985242.9 1 [13,] 243 83.74783 1207.7310 986476.2 -1 [14,] 817 83.76542 1145.5430 994453.1 -1 [15,] 818 83.76545 1848.8536 993331.4 1 [16,] 819 83.76548 2678.1219 996104.7 -1 [17,] 820 83.76551 3093.2159 993389.9 1 [18,] 821 83.76554 3191.8829 996609.5 -1 [19,] 875 83.76718 3142.0300 998033.1 -1 [20,] 876 83.76721 2143.6681 994929.8 1 [21,] 877 83.76724 1125.0096 996074.2 -1 [22,] 933 83.76894 1091.3560 997823.5 -1 [23,] 1350 83.78073 1213.4836 1004865.9 1 [24,] 1351 83.78075 1204.8110 1005998.1 -1 [25,] 1352 83.78078 1096.9027 1004654.3 1 [26,] 1353 83.78080 1084.0217 1005700.3 -1 [27,] 1354 83.78083 1380.1068 1004546.6 1 [28,] 1355 83.78086 1758.8407 1006275.5 -1 [29,] 1358 83.78093 1691.1249 1004687.9 1 [30,] 1359 83.78096 1761.0811 1006240.6 -1 [31,] 1360 83.78098 2008.2450 1004381.3 1 [32,] 2003 83.79994 1260.9753 993992.1 -1 [33,] 2009 83.80012 939.0482 993529.9 -1 [34,] 2063 83.80178 957.1307 992714.5 -1 [35,] 2064 83.80180 1962.1117 991734.6 1 [36,] 2065 83.80183 3023.0255 994751.9 -1 [37,] 2119 83.80348 3033.2497 994049.3 -1 [38,] 2120 83.80351 2228.2324 991064.2 1 [39,] 2121 83.80354 1463.1055 992523.5 -1 [40,] 3137 83.83466 1338.9140 985561.8 -1 [41,] 3141 83.83479 1655.8508 985990.4 -1 [42,] 3142 83.83482 2423.7895 984290.5 1 [43,] 3143 83.83485 3129.3419 987406.3 -1 [44,] 3197 83.83650 3254.3448 988092.6 -1 [45,] 3198 83.83652 2627.6915 984866.3 1 [46,] 3199 83.83656 1796.2869 986577.2 -1 [47,] 3200 83.83659 1241.5633 984910.0 1 [48,] 3201 83.83662 994.0805 985896.6 -1 [49,] 3255 83.83827 1110.1786 986706.5 -1 [50,] 3256 83.83830 1717.1959 985589.9 1 [51,] 3257 83.83833 2300.0735 987904.0 -1 [52,] 3313 83.83987 2244.2110 988456.9 -1 [53,] 3314 83.83990 1822.6456 986278.2 1 [54,] 3315 83.83992 1397.5587 987692.5 -1 [55,] 4417 83.86939 1520.8529 988297.0 -1 [56,] 4421 83.86949 1539.1817 988378.7 -1 [57,] 4422 83.86951 1355.2199 986779.3 1 [58,] 4423 83.86954 1113.7292 987859.4 -1 [59,] 4425 83.86959 924.6022 987629.5 -1 [60,] 4489 83.87130 870.6240 987278.3 -1 [61,] 4490 83.87132 1869.3359 986399.1 1 [62,] 4491 83.87135 2893.2344 989316.3 -1 [63,] 4493 83.87141 3146.7869 989533.7 -1 [64,] 4557 83.87312 3217.1766 989315.0 -1 [65,] 4558 83.87314 2786.9564 986122.9 1 [66,] 4559 83.87317 2252.1647 988314.9 -1 [67,] 4561 83.87322 1818.4331 987895.0 -1 [68,] 5657 83.90410 1549.8811 998155.8 -1 [69,] 5661 83.90422 1638.2285 998300.3 -1 [70,] 5662 83.90425 2383.0073 996620.1 1 [71,] 5663 83.90427 3092.5157 999727.3 -1 [72,] 5719 83.90595 3214.9573 1000136.9 -1 [73,] 5720 83.90598 2256.9604 996919.3 1 [74,] 5721 83.90601 1193.3933 998106.4 -1 [75,] 5723 83.90607 943.1406 997896.6 -1 [76,] 5777 83.90768 874.9468 997986.8 -1 [77,] 5778 83.90771 1180.7586 997111.9 1 [78,] 5779 83.90774 1454.6963 998630.4 -1 [79,] 6961 83.93884 1541.5100 1011571.0 -1 [80,] 6965 83.93894 1469.5346 1011515.7 -1 [81,] 6966 83.93897 1197.9387 1010033.9 1 [82,] 6967 83.93899 934.8126 1010955.1 -1 [83,] 7033 83.94068 1093.1171 1011394.0 -1 [84,] 7034 83.94071 2052.4934 1010249.1 1 [85,] 7035 83.94073 2940.7247 1013263.4 -1 [86,] 7101 83.94241 3163.5119 1013459.9 -1 [87,] 7102 83.94244 2849.2887 1010259.2 1 [88,] 7103 83.94246 2515.4977 1012801.0 -1 [89,] 7169 83.94414 2264.8557 1012629.2 -1 [90,] 7170 83.94417 1948.2360 1010361.7 1 [91,] 7171 83.94419 1635.7683 1012053.2 -1 [92,] 7446 83.95124 1684.9299 1010287.5 1 [93,] 7447 83.95127 1646.4247 1012216.7 -1 [94,] 7448 83.95130 1533.4963 1010701.3 1 [95,] 8317 83.97356 1459.9969 1014730.6 -1 [96,] 8321 83.97366 1704.6332 1015081.5 -1 [97,] 8322 83.97368 2373.1476 1013296.0 1 [98,] 8323 83.97371 3018.4293 1016377.6 -1 [99,] 8389 83.97540 2971.4244 1017290.7 -1 [100,] 8390 83.97542 2038.0306 1014306.5 1 [101,] 8391 83.97545 1105.9160 1015421.4 -1 [102,] 8457 83.97712 876.5859 1016350.1 -1 [103,] 8458 83.97715 1138.8978 1015467.3 1 [104,] 8459 83.97717 1385.4883 1016937.9 -1 [105,] 9695 84.00884 1271.9312 1041001.0 -1 [106,] 9701 84.00899 934.4258 1040773.2 -1 [107,] 9789 84.01124 1014.0312 1043101.5 -1 [108,] 9790 84.01126 1966.8470 1042046.8 1 [109,] 9791 84.01129 2915.9864 1045164.8 -1 [110,] 9793 84.01134 3123.0568 1045419.0 -1 [111,] 9879 84.01352 3117.2879 1047314.7 -1 [112,] 9880 84.01354 2606.3128 1044074.6 1 [113,] 9881 84.01357 1933.5093 1046129.4 -1 [114,] 10580 84.03163 1454.6884 1041428.3 1 [115,] 10581 84.03167 1343.9475 1042990.6 -1 [116,] 10582 84.03170 1433.4295 1041664.4 1 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 917.19 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 974.555 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 973.719 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.636 PER MEG" [1] "MAX ORIG-PDPRCORR DIFFERENCE > 200" [1] 337.1005 410.3021 384.9182 374.8457 343.6588 [1] -400.1140 -1020.7802 -815.1864 -618.6600 -460.3786 [1] "Nominal linear calibrations:" [1] "co2scl = 0.964 co2off = 23.3 o2scla = -0.049 o2offa = -18.7" [1] "(dV/V)/(dXO2/XO2) = -4.278" [1] "(dV/V)/d(O2/N2) = -3.382" [1] "Finding cal and sample periods" [1] "Median Cal: 2.46 minutes" [1] "Average Cal: 2.55 minutes" [1] "Shortest Cal: 2.24 minutes" [1] "Longest Cal: 5 minutes" [1] "Removed 1 calibration period(s) with less than 30 seconds of data" [1] "at: 10" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00808" [1] "HS CO2 vs. PACAB: m = -0.0018, r^2 = 0.05" [1] "LS CO2 vs. PACAB: m = -0.0144, r^2 = 0.46" [1] "HS+LS LIH2O vs. PACAB: m = -2.73e-05" [1] "HS LIH2O vs. PACAB: m = -1.15e-05, r^2 = 0" [1] "LS LIH2O vs. PACAB: m = -4.31e-05, r^2 = 0.06" [1] "HS+LS CO2 vs. LIH2O: m = 42.9" [1] "HS CO2 vs. LIH2O: m = 14.3, r^2 = 0.08" [1] "LS CO2 vs. LIH2O: m = 71.6, r^2 = 0.52" [1] "APCO2 vs. PACAB: m = -0.0558, r^2 = 0.29" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.852" [1] "HS O2 vs. PACAB: m = -0.564, r^2 = 0.3" [1] "LS O2 vs. PACAB: m = -1.14, r^2 = 0.65" [1] "HS+LS O2 vs. LIH2O: m = -2070" [1] "HS O2 vs. LIH2O: m = -2360, r^2 = 0.15" [1] "LS O2 vs. LIH2O: m = -1770, r^2 = 0.07" [1] "HS+LS O2 vs. PAO2: m = -39.7" [1] "HS O2 vs. PAO2: m = -55, r^2 = 0.98" [1] "LS O2 vs. PAO2: m = -24.5, r^2 = 0.26" [1] "HS+LS O2 vs. TPBOX: m = 4.26" [1] "HS O2 vs. TPBOX: m = 2.72, r^2 = 0.15" [1] "LS O2 vs. TPBOX: m = 5.79, r^2 = 0.49" [1] "APO vs. PACAB: m = 0.956, r^2 = 0.29" [1] "APO vs. PAO2: m = -7.6, r^2 = 0.01" [1] "APO vs. TPBOX: m = -0.291, r^2 = 0" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 5.43, r^2 = 0.12" [1] "LS CO2 vs. LiCor Cell P: m = 2.79, r^2 = 0.03" [1] "HS CO2 vs. CO2 Vol P: m = 0.759, r^2 = 0.14" [1] "LS CO2 vs. CO2 Vol P: m = 0.836, r^2 = 0.2" [1] "HS CO2 vs. SLOPE: m = -0.707, r^2 = 0.1" [1] "LS CO2 vs. SLOPE: m = -1.39, r^2 = 0.49" [1] "HS O2 vs. O2 Vol P: m = -50.2, r^2 = 0.88" [1] "LS O2 vs. O2 Vol P: m = -27.3, r^2 = 0.29" [1] "HS O2 vs. O2 Cell T: m = 14.7, r^2 = 0.74" [1] "LS O2 vs. O2 Cell T: m = 13.2, r^2 = 0.5" [1] "HS O2 vs. CO2 Vol P: m = -33.3, r^2 = 0.29" [1] "LS O2 vs. CO2 Vol P: m = -26.8, r^2 = 0.19" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -13.3, r^2 = 0.06" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 11, r^2 = 0.1" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -33.3, r^2 = 0.29" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -26.8, r^2 = 0.19" [1] "HS O2 vs. LIH2O: m = -2770, r^2 = 0.2" [1] "LS O2 vs. LIH2O: m = -2700, r^2 = 0.17" [1] "HS O2 vs. SLOPE: m = -2.81, r^2 = 0.37" [1] "LS O2 vs. SLOPE: m = -0.543, r^2 = 0.01" [1] "HS CO2 vs. Time: m = 16.511, r^2 = 0.8" [1] "LS CO2 vs. Time: m = 16.869, r^2 = 0.81" [1] "HS CO2 vs. Cylinder T: m = -1.829, r^2 = 0.44" [1] "LS CO2 vs. Cylinder T: m = -1.331, r^2 = 0.248" [1] "HS CO2 vs. Regulator T: m = -0.895, r^2 = 0.5" [1] "LS CO2 vs. Regulator T: m = -0.621, r^2 = 0.287" [1] "HS CO2 vs. Ref. Volumes T: m = 1.01, r^2 = 0.29" [1] "LS CO2 vs. Ref. Volumes T: m = 0.389, r^2 = 0.046" [1] "HS CO2 vs. Manifold T: m = 0.371, r^2 = 0.37" [1] "LS CO2 vs. Manifold T: m = 0.178, r^2 = 0.088" [1] "HS CO2 vs. Pump Box T: m = 0.183, r^2 = 0.58" [1] "LS CO2 vs. Pump Box T: m = 0.155, r^2 = 0.516" [1] "HS O2 vs. Cylinder T: m = -54.842, r^2 = 0.41" [1] "LS O2 vs. Cylinder T: m = -42.222, r^2 = 0.225" [1] "HS O2 vs. Regulator T: m = -17.194, r^2 = 0.19" [1] "LS O2 vs. Regulator T: m = 1.051, r^2 = 0.001" [1] "HS O2 vs. Ref. Volumes T: m = 36.569, r^2 = 0.4" [1] "LS O2 vs. Ref. Volumes T: m = 13.709, r^2 = 0.052" [1] "HS O2 vs. Manifold T: m = 17.323, r^2 = 0.84" [1] "LS O2 vs. Manifold T: m = 14.832, r^2 = 0.55" [1] "HS O2 vs. Pump Box T: m = 3.713, r^2 = 0.25" [1] "LS O2 vs. Pump Box T: m = 5.339, r^2 = 0.553" [1] "HS CO2 vs. WT P: m = -0.003, r^2 = 0.01" [1] "LS CO2 vs. WT P: m = -0.002, r^2 = 0.002" [1] "HS CO2 vs. SP P: m = -0.0015, r^2 = 0.05" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.179, r^2 = 0.15" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.167, r^2 = 0.15" [1] "LS CO2 vs. SP P: m = -0.00228, r^2 = 0.02" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.026, r^2 = 0.01" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.027, r^2 = 0.01" [1] "HS CO2 vs. WT FL: m = -0.028, r^2 = 0" [1] "LS CO2 vs. WT FL: m = -0.163, r^2 = 0.082" [1] "HS CO2 vs. SP FL: m = 0.009, r^2 = 0" [1] "LS CO2 vs. SP FL: m = -0.209, r^2 = 0.1" [1] "HS O2 vs. SLPDIFF: m = 0.682, r^2 = 0.08" [1] "LS O2 vs. SLPDIFF: m = -2.03, r^2 = 0.375" [1] "HS O2 vs. WT P: m = -0.554, r^2 = 0.33" [1] "LS O2 vs. WT P: m = -1.075, r^2 = 0.594" [1] "HS O2 vs. SP P: m = -0.562, r^2 = 0.33" [1] "LS O2 vs. SP P: m = -1.114, r^2 = 0.578" [1] "HS O2 vs. WT FL: m = 10.068, r^2 = 0.33" [1] "LS O2 vs. WT FL: m = 5.18, r^2 = 0.075" [1] "HS O2 vs. SP FL: m = 11.468, r^2 = 0.53" [1] "LS O2 vs. SP FL: m = 12.146, r^2 = 0.306" [1] "Plotting calibration shapes" [1] "Empirical LP O2 lag time(s): 7" [1] "Empirical LP O2 lag flow(s): 111.9" [1] "Empirical LP CO2 lag time(s): 7" [1] "Empirical LP CO2 lag flow(s): 111.9" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.65" [1] "Median all HS CO2 SD = 0.58" [1] "Median all LS CO2 SD = 0.68" [1] "Median all LT CO2 SD = 0.66" [1] "Median all WT CO2 SD = 0.63" [1] "Median all HS or LS CO2 SD = 0.65" [1] "Median all cal O2 SD = 2.54" [1] "Median all HS O2 SD = 2.1" [1] "Median all LS O2 SD = 3" [1] "Median all LT O2 SD = 2.19" [1] "Median all WT O2 SD = 1.84" [1] "Median all HS or LS O2 SD = 2.64" [1] "Median all cal CO2 Slope = 0.04" [1] "Median all HS CO2 Slope = 0.03" [1] "Median all LS CO2 Slope = 0.04" [1] "Median all LT CO2 Slope = 0.16" [1] "Median all WT CO2 Slope = -0.09" [1] "Median all HS or LS CO2 Slope = 0.03" [1] "Median all cal O2 Slope = 0.14" [1] "Median all HS O2 Slope = 1.3" [1] "Median all LS O2 Slope = 0.65" [1] "Median all LT O2 Slope = -2.5" [1] "Median all WT O2 Slope = 0.14" [1] "Median all HS or LS O2 Slope = 0.84" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 7.73 per meg" [1] "Initial O2 Calibration Offset = -6.67 per meg" [1] "SD of O2 Calibration (post-takeoff) = 6.16 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -8.29 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -14.1 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO3 inlet volumes" [1] "before any lag: 63995.44 89222.6" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 49 at 105 sccm" [1] "Median O2 delay + tlagff = 49.9 at 105 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 48.4 at 105 sccm" [1] "Median O2 delay from 3-way + tlagff = 49.3 at 105 sccm" [1] "after calc and ff lag: 63947.5 89193.49" [1] "2025-05-13 11:53:30 MDT" [1] "Calculating 1-sec interpolated values" [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 3.1337890 2.9516887 2.7047567 2.5559905 4.4987377 4.2681228 [7] 3.9212044 3.5840639 7.3072882 10.2603597 9.9475283 9.5412672 [13] 9.2145057 2.4272630 2.1327451 1.8653129 1.5654343 5.5550827 [19] 8.6388881 8.3538713 8.0624275 7.7696959 7.3962374 7.1020448 [25] 6.8030914 6.4516370 1.9358621 1.7063222 1.5581800 1.4479847 [31] 1.4291146 1.6787283 1.3865133 1.1804002 1.0667403 2.5926673 [37] 2.4590586 2.3003184 2.1407292 1.9953450 2.5650622 5.3749609 [43] 5.3749609 5.0941247 5.5892276 3.8485982 3.8485982 3.3514120 [49] 2.3663126 2.9235920 2.9235920 2.9235920 10.1486239 6.6097629 [55] 6.6097629 6.7915051 6.9588567 10.5382257 12.8531182 12.0625209 [61] 10.3271062 10.3271062 8.5752809 9.6206976 12.5997320 12.7777395 [67] 10.9192294 9.2198155 10.3816362 10.3816362 10.3816362 13.7816491 [73] 9.8182482 9.8182482 9.8182482 10.5176477 11.1857778 11.0683287 [79] 11.0683287 10.7898389 5.6828247 5.6828247 5.6828247 4.3058546 [85] -1.0566492 -1.0566492 -1.0566492 -0.1923192 0.6916253 6.6527066 [91] 6.6480499 5.8619744 4.7696085 8.5163785 8.6320534 13.2715690 [97] 13.2924134 13.2924134 6.9095696 5.9780146 5.9780146 5.9780146 [103] 7.5952256 11.6070797 11.6070797 11.6070797 -8.6776476 -8.6776476 [109] -8.6776476 -9.4888360 9.8178735 9.8178735 9.8178735 6.1166412 [115] 1.3549414 1.5390984 2.4857704 -0.3663602 -2.4538747 -1.3004672 [121] -0.1052074 0.0686873 -1.0475044 -2.6826284 -2.6826284 -0.6306120 [127] 3.5253032 3.5253032 3.5253032 -1.0642364 -3.8986342 -3.8986342 [133] -4.5311442 -3.0648731 -3.0648731 -3.2068366 -5.6744141 -6.2950029 [139] -6.2950029 -3.1522354 -11.9605090 -11.9605090 -11.1796217 -9.9865188 [145] -1.1706763 -1.2593212 -9.8330247 -9.8330247 -13.2886194 -13.2886194 [151] -15.1471251 -15.1471251 -20.3643362 -18.3506143 -17.2066666 -7.2146674 [157] -7.2146674 -7.4990530 -7.5885912 -11.1779122 -11.1744999 -11.1627648 [163] -11.1587368 -9.5404340 -9.5404340 -10.1711139 -10.6631773 -13.5682421 [169] -13.5832082 -13.6044252 -13.7161363 -13.9653515 -14.0275653 -14.1274466 [175] -8.5375712 -8.6562989 -9.4023907 -9.8684172 -14.6701685 -14.6701685 [181] -15.0621709 -15.0621709 -18.7347415 -18.7347415 -15.7801376 -12.7472118 [187] -7.4422513 -9.8057408 -12.3389634 -17.7858220 -19.9035552 -19.4916849 [193] -18.7617231 -10.3245867 -10.3245867 -9.4150420 -9.3692912 -18.2427946 [199] -18.1630959 -14.6741148 -12.6727563 -9.7700475 -10.6126652 -11.3920661 [205] -13.8386315 -13.8796455 -11.9573385 -11.3177333 -8.2025910 -8.2025910 [211] -4.2089240 -4.1094719 -7.9814990 -7.9814990 -5.6978450 -5.3792121 [217] -8.8787824 -7.3197455 -3.5240124 -2.7083010 -0.4989868 -1.7603338 [223] -3.3661373 2.6324439 2.6141683 0.4800751 -0.4682631 0.8755818 [229] 0.8755818 -4.7576053 -5.2090600 -19.7260466 -20.6495016 -22.7520081 [235] -23.8742274 -24.6645665 -25.4745150 -27.5598234 -28.2641564 -28.4454355 [241] -27.8983962 -25.7356749 -20.1695412 -20.1695412 -19.6439453 -19.5768701 [247] -12.8275134 -12.8275134 -15.1217885 -14.4373673 -9.0190268 -8.4266457 [253] -5.6090676 -17.5060042 -17.9802571 -17.9559805 -17.7068341 -6.2456265 [259] -6.2456265 -8.0814501 -10.8174576 [1] 202.0161 203.9251 206.5137 208.0733 210.6953 213.1129 216.7497 220.2840 [9] 223.6369 226.6297 229.9092 234.1682 237.5937 239.8073 242.8948 245.6984 [17] 248.8421 252.0420 255.4112 258.3991 261.4544 264.5232 267.5496 270.6337 [25] 273.7677 277.4521 280.5539 282.9602 284.5132 285.6684 287.2178 289.1049 [33] 292.1683 294.3290 295.5205 296.9911 298.3918 300.0559 301.7289 303.3414 [41] 305.0453 306.7050 308.0999 309.7085 311.2128 312.9193 314.4929 316.0018 [49] 317.4969 318.9525 320.2203 321.8264 323.5280 325.3805 326.7754 328.1835 [57] 329.4831 331.1918 332.7837 334.1783 335.5476 336.9884 338.4498 339.9528 [65] 341.3497 342.8994 344.1807 345.5593 347.0458 348.5930 349.8254 351.3972 [73] 352.7048 354.1386 355.5420 356.9761 358.1276 359.6565 360.8901 362.6292 [81] 364.1497 365.5528 367.0406 368.1002 369.7500 370.9924 372.6283 373.9466 [89] 375.2777 376.6844 378.0130 379.6426 380.8977 382.3790 383.6487 385.3336 [97] 386.8249 388.1277 389.6616 391.1091 392.4667 393.7081 395.2507 396.4974 [105] 398.0808 399.9438 401.8429 403.2542 404.9394 406.5867 408.1829 409.7309 [113] 411.3706 413.0688 414.5736 416.1076 417.7004 419.2449 420.6875 422.2485 [121] 423.7762 425.3578 426.8268 428.4557 430.0311 431.5725 433.1049 434.6520 [129] 436.1120 437.8622 439.4791 441.0058 442.2413 443.8225 445.2902 446.8320 [137] 448.4024 449.9045 451.5188 452.8919 454.4303 455.9768 457.3217 459.0188 [145] 460.4283 461.6808 463.2189 464.7166 466.0790 467.6948 469.0638 470.5715 [153] 472.3478 473.8390 475.2368 476.6699 478.1679 479.6264 481.0542 482.4508 [161] 483.8738 485.2952 486.7001 488.2572 489.4933 490.9315 492.4083 493.6811 [169] 495.1920 496.5685 497.8280 499.3931 500.7813 502.0797 503.7114 505.1139 [177] 506.4936 507.9341 509.3878 510.6476 512.0976 513.3485 514.7192 516.1376 [185] 517.5102 518.7996 520.2698 521.5974 522.8436 524.2076 525.6374 526.9824 [193] 528.1968 529.6043 530.9810 532.2528 533.5661 535.1193 536.4922 537.7258 [201] 539.1674 540.3732 541.6610 543.0680 544.4155 545.7050 547.0931 548.3288 [209] 549.6868 550.8020 552.0392 553.4849 554.7710 555.8085 557.1781 558.5124 [217] 559.6992 560.8414 562.0830 563.3447 564.9269 566.1940 567.5278 568.5627 [225] 569.8936 571.1768 572.4885 573.6516 574.7720 575.9571 577.2236 578.2992 [233] 579.6617 580.7815 582.1131 583.3202 584.5560 585.6971 586.8370 587.9756 [241] 589.1934 590.3484 591.7144 592.8781 594.0699 595.2896 596.3251 597.5117 [249] 598.8145 599.9132 601.1052 602.2387 603.3533 604.5902 605.6721 606.6927 [257] 607.8582 608.8542 610.2634 611.3326 612.4719 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 21691 records [1] 1 2167 21691 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] NA -269.21 -258.26 -240.31 -223.89 -222.66 [1] 22969 [1] "Average Date / Time for slice RF01 = 2010-03-24 21:43:36.2135388851166" [1] "sum(lsel) = 1817" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 13.20911 838.35077 [1] 13.20911 838.35077 [1] 161.6492 986.7909 [1] 1.67400e-03 9.99999e+05 [1] "highestmid = 724.948395" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF01 APO_AO2 range = -327.9,-275.11" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 21691 records [1] 1 2167 21691 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] -528.60 -530.63 -517.65 -489.41 -459.65 -452.92 [1] 22977 [1] "Average Date / Time for slice RF01 = 2010-03-24 21:43:36.2135388851166" [1] "sum(lsel) = 1817" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 13.20911 838.35077 [1] 13.20911 838.35077 [1] 161.6492 986.7909 [1] 1.67400e-03 9.99999e+05 [1] "highestmid = 724.948395" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF01 O2_AO2 range = -580.98,-459.5" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 21691 records [1] 1 2167 21691 [1] "done reading AO2" [1] 2010 2010 2010 2010 2010 2010 [1] 75 75 75 75 75 75 [1] 65294 65300 65310 65320 65330 65340 [1] "2010-03-16 18:08:14 UTC" "2010-03-16 18:08:20 UTC" [3] "2010-03-16 18:08:30 UTC" "2010-03-16 18:08:40 UTC" [5] "2010-03-16 18:08:50 UTC" "2010-03-16 18:09:00 UTC" [1] NA 399.703 399.111 397.419 394.779 393.928 [1] 24157 [1] "Average Date / Time for slice RF01 = 2010-03-24 21:43:52.454695224762" [1] "sum(lsel) = 1821" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 13.20911 838.35077 [1] 13.20911 838.35077 [1] 161.6492 986.7909 [1] 1.67400e-03 9.99999e+05 [1] "highestmid = 724.948395" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO3 RF01 CO2_AO2 range = 384.61,399.6" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 8 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"