[1] "2025-05-13 11:47:16 MDT" options [1,] "file" "091121a" [2,] "flight" "RF10" [3,] "project" "HIPPO2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "091121a" [1] "Reading in flight and plotting intervals" Read 1 record [1] "Reading in /scr/raf/stephens/AO2DAT/091121a.mr" Read 12282 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.23 seconds" [1] "New JOGEST = 2.23 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/091121a.hr" Read 49130 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 12282 49129 [1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH" [1] 12282 49129 [1] "Converting hrdata statout" [1] "Tue May 13 11:47:17 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.05 O2 = -393.5" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.27 O2 = -1013.8" [1] "position 3 cylinder OK30054 description: LT CO2 = 384.89 O2 = -843.8" [1] "position 4 cylinder OK170199 description: WT CO2 = 384.89 O2 = -788.2" [1] 337.0526 410.2725 384.8924 384.8909 NA [1] -393.5328 -1013.8370 -843.8197 -788.1584 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.971 co2off = 24 o2scla = -0.047 o2offa = -52" [1] "(dV/V)/(dXO2/XO2) = -4.462" [1] "(dV/V)/d(O2/N2) = -3.528" [1] "Reading in very high resolution timeseries" Read 245640 records [1] 245640 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:47:17 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:47:19 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.528" [1] "o2scaleavenew_drelVdrelP = -4.462" [1] "median(o2scalenew) = -3.528" [1] "Empirical dV/V vs dP/P relationship =-3.501, r^2 =0.029, damping =0.785" [1] "Tue May 13 11:47:19 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:47:52 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 28175445.864 SECONDS" [1] "Tue May 13 11:47:52 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 3 medium-rate record(s) with accumulation errors" [1] "Removed 69 medium-rate record(s) > eco or < ico" [1] "from: 12211" [1] "to: 12279" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 1215 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 452.501 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 111.154 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 109.697 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -15.379 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 21 [1] 142 [1] 161 [1] 161 [1] 164 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 83 325.7856 1604.95808 992473.2 -1 [2,] 84 325.7856 907.25927 990890.7 1 [3,] 85 325.7857 266.92231 991148.1 -1 [4,] 161 325.7880 365.06251 991747.3 -1 [5,] 162 325.7880 1327.17993 991353.2 1 [6,] 163 325.7880 2479.06319 993842.1 -1 [7,] 241 325.7904 1970.78715 994680.5 -1 [8,] 327 325.7927 2282.99278 996990.5 -1 [9,] 328 325.7928 3025.57602 994692.1 1 [10,] 329 325.7928 4022.54218 998832.4 -1 [11,] 330 325.7928 5076.08963 994711.9 1 [12,] 331 325.7928 5483.85243 1000244.1 -1 [13,] 332 325.7929 5055.54858 994698.7 1 [14,] 333 325.7929 4433.39733 999101.8 -1 [15,] 334 325.7929 4565.77894 994657.2 1 [16,] 335 325.7929 5062.06066 999836.3 -1 [17,] 336 325.7930 5674.01934 994724.1 1 [18,] 337 325.7930 5899.82651 1000683.0 -1 [19,] 338 325.7930 5620.68753 994732.8 1 [20,] 339 325.7930 5038.92682 999787.9 -1 [21,] 340 325.7931 4605.31605 994748.5 1 [22,] 341 325.7931 4225.09079 999014.1 -1 [23,] 342 325.7931 3893.46497 994795.6 1 [24,] 343 325.7931 3511.01268 998323.7 -1 [25,] 344 325.7932 3174.95855 994829.9 1 [26,] 345 325.7932 2830.85063 997665.4 -1 [27,] 349 325.7933 2687.87121 997664.7 -1 [28,] 350 325.7933 2950.85768 994965.2 1 [29,] 351 325.7933 3263.79272 998287.2 -1 [30,] 352 325.7934 3664.12251 994995.7 1 [31,] 353 325.7934 4158.96941 999250.6 -1 [32,] 354 325.7934 4745.10523 995036.6 1 [33,] 355 325.7935 5119.78995 1000228.4 -1 [34,] 357 325.7935 4746.10772 999839.9 -1 [35,] 358 325.7935 4331.96031 995095.0 1 [36,] 359 325.7936 4022.28938 999143.8 -1 [37,] 367 325.7938 3759.74365 999025.2 -1 [38,] 368 325.7938 3565.48236 995260.4 1 [39,] 369 325.7938 3198.87078 998476.7 -1 [40,] 370 325.7938 2833.37267 995287.1 1 [41,] 371 325.7939 2509.89779 997825.2 -1 [42,] 604 325.7999 471.37911 997831.5 1 [43,] 605 325.7999 554.74679 998258.5 -1 [44,] 606 325.7999 565.78868 997560.4 1 [45,] 1084 325.8125 358.35396 999715.0 1 [46,] 1085 325.8126 379.50476 999920.9 -1 [47,] 1086 325.8126 461.66654 999408.2 1 [48,] 1145 325.8144 478.49536 1000081.7 -1 [49,] 1149 325.8145 851.19844 1000526.3 -1 [50,] 1150 325.8145 1692.97528 999599.4 1 [51,] 1151 325.8146 2471.54522 1002112.8 -1 [52,] 1227 325.8169 2438.04345 1002792.7 -1 [53,] 1228 325.8169 1381.15204 1000372.3 1 [54,] 1229 325.8169 359.90613 1000746.1 -1 [55,] 2141 325.8442 504.49180 1005814.9 -1 [56,] 2221 325.8466 272.61035 1005865.7 -1 [57,] 2222 325.8466 1166.34417 1005542.3 1 [58,] 2223 325.8466 2012.81298 1007823.1 -1 [59,] 2224 325.8467 2378.65532 1005905.9 1 [60,] 2225 325.8467 2509.62790 1008493.7 -1 [61,] 2258 325.8477 2588.93427 1005954.7 1 [62,] 2259 325.8477 2679.61511 1008497.8 -1 [63,] 2260 325.8477 2741.29741 1005645.8 1 [64,] 2299 325.8488 2628.17853 1008077.0 -1 [65,] 2300 325.8489 1930.46678 1005426.6 1 [66,] 2301 325.8489 1149.58914 1006498.3 -1 [67,] 3343 325.8792 669.79367 993590.2 -1 [68,] 3345 325.8792 663.65534 993622.2 -1 [69,] 3346 325.8792 1251.60394 992987.2 1 [70,] 3347 325.8793 2072.97997 995149.0 -1 [71,] 3349 325.8793 2549.15914 995570.6 -1 [72,] 3423 325.8815 2672.79089 997489.7 -1 [73,] 3424 325.8815 1966.83904 994839.9 1 [74,] 3425 325.8815 1096.79313 995861.6 -1 [75,] 3426 325.8816 551.44773 994871.0 1 [76,] 3427 325.8816 304.57944 995198.1 -1 [77,] 3501 325.8838 196.77827 996926.4 -1 [78,] 3502 325.8838 667.44617 996754.4 1 [79,] 3503 325.8838 1228.53272 998085.8 -1 [80,] 3504 325.8838 1633.75864 996815.2 1 [81,] 3505 325.8839 1835.26445 998675.9 -1 [82,] 3581 325.8858 1638.41710 1000070.0 -1 [83,] 3582 325.8858 1140.05661 998486.8 1 [84,] 3583 325.8859 699.67828 999215.6 -1 [85,] 4681 325.9137 600.41995 993948.3 -1 [86,] 4687 325.9139 302.66965 993605.7 -1 [87,] 4763 325.9158 189.27884 993024.5 -1 [88,] 4764 325.9159 1021.63143 992841.1 1 [89,] 4765 325.9159 1940.56471 994854.8 -1 [90,] 4767 325.9159 2477.49986 995322.9 -1 [91,] 4841 325.9178 2613.98307 994734.2 -1 [92,] 4842 325.9178 2330.33637 992116.3 1 [93,] 4843 325.9179 1982.21569 994071.2 -1 [94,] 4845 325.9179 1750.17710 993837.1 -1 [95,] 4919 325.9198 1698.13553 993026.9 -1 [96,] 4920 325.9198 1350.25722 991337.7 1 [97,] 4921 325.9198 939.66830 992250.7 -1 [98,] 5993 325.9489 638.52797 992760.6 -1 [99,] 5995 325.9490 658.73433 992759.1 -1 [100,] 5996 325.9490 1262.21514 992090.3 1 [101,] 5997 325.9490 1976.86646 994124.8 -1 [102,] 5999 325.9491 2544.97382 994573.4 -1 [103,] 6073 325.9511 2612.11037 994109.1 -1 [104,] 6074 325.9511 2564.12372 991498.8 1 [105,] 6075 325.9512 2160.60812 993567.6 -1 [106,] 6076 325.9512 1254.96567 991478.5 1 [107,] 6077 325.9512 370.12258 991831.5 -1 [108,] 7430 325.9890 511.80819 990300.1 1 [109,] 7431 325.9890 477.24085 990633.7 -1 [110,] 7432 325.9890 551.76074 989990.0 1 [111,] 7619 325.9942 552.11408 988704.4 -1 [112,] 7625 325.9944 180.04813 988254.8 -1 [113,] 7701 325.9967 185.06934 988582.1 -1 [114,] 7702 325.9967 1208.63688 988392.3 1 [115,] 7703 325.9968 2299.25130 990709.2 -1 [116,] 7705 325.9968 2525.81778 990933.7 -1 [117,] 7779 325.9987 2612.91565 991792.2 -1 [118,] 7780 325.9987 2302.64770 989232.1 1 [119,] 7781 325.9988 1990.65801 991229.0 -1 [120,] 7857 326.0007 1887.92690 992524.3 -1 [121,] 7858 326.0007 1303.53618 990677.4 1 [122,] 7859 326.0008 739.75017 991448.5 -1 [123,] 8951 326.0289 569.66387 1004895.8 -1 [124,] 8955 326.0290 921.89741 1005291.0 -1 [125,] 8956 326.0290 1723.50183 1004290.9 1 [126,] 8957 326.0291 2508.71002 1006827.0 -1 [127,] 9031 326.0310 2642.81594 1006631.8 -1 [128,] 9032 326.0310 2038.65246 1003967.7 1 [129,] 9033 326.0310 1240.28823 1005097.5 -1 [130,] 9034 326.0311 667.09357 1003941.3 1 [131,] 9035 326.0311 330.52326 1004259.6 -1 [132,] 10280 326.0627 498.13312 1002283.2 1 [133,] 10281 326.0627 501.83654 1002695.1 -1 [134,] 10282 326.0628 573.86313 1002080.9 1 [135,] 10311 326.0635 602.48106 1002860.3 -1 [136,] 10317 326.0637 295.14956 1002568.0 -1 [137,] 10393 326.0656 215.28894 1002759.9 -1 [138,] 10394 326.0656 1236.04322 1002533.3 1 [139,] 10395 326.0656 2302.92359 1004904.1 -1 [140,] 10397 326.0657 2575.44150 1005157.0 -1 [141,] 10471 326.0676 2635.97246 1005414.8 -1 [142,] 10472 326.0676 2281.35645 1002757.1 1 [143,] 10473 326.0676 1891.83751 1004648.1 -1 [144,] 10549 326.0695 1728.38157 1004649.6 -1 [145,] 10550 326.0696 1248.25916 1002917.6 1 [146,] 10551 326.0696 762.91507 1003687.3 -1 [147,] 11894 326.1048 982.70520 1004640.6 1 [148,] 11895 326.1048 847.53229 1005696.7 -1 [149,] 11896 326.1048 727.33484 1004995.5 1 [150,] 11979 326.1073 735.30100 1009845.6 -1 [151,] 11981 326.1074 805.38496 1009968.1 -1 [152,] 11982 326.1074 894.30851 1009183.2 1 [153,] 11983 326.1075 1202.60355 1010555.1 -1 [154,] 11984 326.1075 1882.81974 1009344.5 1 [155,] 11985 326.1075 2533.79647 1011980.2 -1 [156,] 12061 326.1098 2352.86011 1014396.0 -1 [157,] 12062 326.1099 1324.08796 1012073.4 1 [158,] 12063 326.1099 377.39934 1012473.4 -1 [159,] 12139 326.1122 465.02734 1014153.0 -1 [160,] 12140 326.1123 1182.17701 1013652.4 1 [161,] 12141 326.1123 1847.99190 1015565.5 -1 [162,] 12208 326.1143 2479.41290 1014020.4 1 [163,] 12209 326.1143 1928.21582 1016015.2 -1 [164,] 12210 326.1144 -60.94008 1013990.3 1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 5647 325.9389 284.714 [2,] 6022 325.9498 299.681 [3,] 9298 326.0378 280.999 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 452.501 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -69.764 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -77.783 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -15.379 PER MEG" [1] 337.0526 410.2725 384.8924 384.8909 NA [1] -393.5328 -1013.8370 -843.8197 -788.1584 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.971 co2off = 24 o2scla = -0.047 o2offa = -52.2" [1] "(dV/V)/(dXO2/XO2) = -4.458" [1] "(dV/V)/d(O2/N2) = -3.525" [1] "Finding cal and sample periods" [1] "Median Cal: 3.05 minutes" [1] "Average Cal: 3.09 minutes" [1] "Shortest Cal: 2.8 minutes" [1] "Longest Cal: 3.41 minutes" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00816" [1] "HS CO2 vs. PACAB: m = -0.00884, r^2 = 0.95" [1] "LS CO2 vs. PACAB: m = -0.00749, r^2 = 0.85" [1] "HS+LS LIH2O vs. PACAB: m = -0.00124" [1] "HS LIH2O vs. PACAB: m = -0.0013, r^2 = 0.95" [1] "LS LIH2O vs. PACAB: m = -0.00118, r^2 = 0.99" [1] "HS+LS CO2 vs. LIH2O: m = 6.11" [1] "HS CO2 vs. LIH2O: m = 6.01, r^2 = 0.89" [1] "LS CO2 vs. LIH2O: m = 6.22, r^2 = 0.82" [1] "APCO2 vs. PACAB: m = -0.00525, r^2 = 0.01" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0966" [1] "HS O2 vs. PACAB: m = 0.00348, r^2 = 0" [1] "LS O2 vs. PACAB: m = 0.19, r^2 = 0.46" [1] "HS+LS O2 vs. LIH2O: m = -88.1" [1] "HS O2 vs. LIH2O: m = -18.2, r^2 = 0.02" [1] "LS O2 vs. LIH2O: m = -158, r^2 = 0.45" [1] "HS+LS O2 vs. PAO2: m = -24.7" [1] "HS O2 vs. PAO2: m = -18.6, r^2 = 0.42" [1] "LS O2 vs. PAO2: m = -30.7, r^2 = 0.49" [1] "HS+LS O2 vs. TPBOX: m = 3.98" [1] "HS O2 vs. TPBOX: m = 2.08, r^2 = 0.17" [1] "LS O2 vs. TPBOX: m = 5.88, r^2 = 0.73" [1] "APO vs. PACAB: m = 0.0944, r^2 = 0.01" [1] "APO vs. PAO2: m = 4.59, r^2 = 0" [1] "APO vs. TPBOX: m = 0.798, r^2 = 0" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -1.57, r^2 = 0.01" [1] "LS CO2 vs. LiCor Cell P: m = -3.51, r^2 = 0.03" [1] "HS CO2 vs. CO2 Vol P: m = 0.239, r^2 = 0" [1] "LS CO2 vs. CO2 Vol P: m = -0.264, r^2 = 0" [1] "HS CO2 vs. SLOPE: m = 0.732, r^2 = 0.02" [1] "LS CO2 vs. SLOPE: m = 4.2, r^2 = 0.41" [1] "HS O2 vs. O2 Vol P: m = -19.3, r^2 = 0.49" [1] "LS O2 vs. O2 Vol P: m = -31.5, r^2 = 0.49" [1] "HS O2 vs. O2 Cell T: m = 9.46, r^2 = 0.53" [1] "LS O2 vs. O2 Cell T: m = 15.1, r^2 = 0.53" [1] "HS O2 vs. CO2 Vol P: m = -31.4, r^2 = 0.14" [1] "LS O2 vs. CO2 Vol P: m = 4.1, r^2 = 0" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.0572, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -4.67, r^2 = 0.08" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -31.4, r^2 = 0.14" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 4.1, r^2 = 0" [1] "HS O2 vs. LIH2O: m = -31.8, r^2 = 0.05" [1] "LS O2 vs. LIH2O: m = -155, r^2 = 0.44" [1] "HS O2 vs. SLOPE: m = -0.479, r^2 = 0.03" [1] "LS O2 vs. SLOPE: m = -0.564, r^2 = 0" [1] "HS CO2 vs. Time: m = 21.625, r^2 = 0.91" [1] "LS CO2 vs. Time: m = 23.182, r^2 = 0.91" [1] "HS CO2 vs. Cylinder T: m = -1.964, r^2 = 0.4" [1] "LS CO2 vs. Cylinder T: m = -2.579, r^2 = 0.401" [1] "HS CO2 vs. Regulator T: m = -0.01, r^2 = 0" [1] "LS CO2 vs. Regulator T: m = -0.135, r^2 = 0.036" [1] "HS CO2 vs. Ref. Volumes T: m = 0.201, r^2 = 0.02" [1] "LS CO2 vs. Ref. Volumes T: m = 0.033, r^2 = 0" [1] "HS CO2 vs. Manifold T: m = 0.054, r^2 = 0.01" [1] "LS CO2 vs. Manifold T: m = -0.135, r^2 = 0.031" [1] "HS CO2 vs. Pump Box T: m = -0.073, r^2 = 0.05" [1] "LS CO2 vs. Pump Box T: m = -0.17, r^2 = 0.318" [1] "HS O2 vs. Cylinder T: m = -4.027, r^2 = 0.01" [1] "LS O2 vs. Cylinder T: m = -2.994, r^2 = 0.001" [1] "HS O2 vs. Regulator T: m = 4.708, r^2 = 0.2" [1] "LS O2 vs. Regulator T: m = 8.957, r^2 = 0.3" [1] "HS O2 vs. Ref. Volumes T: m = 18.895, r^2 = 0.44" [1] "LS O2 vs. Ref. Volumes T: m = 30.769, r^2 = 0.428" [1] "HS O2 vs. Manifold T: m = 7.859, r^2 = 0.5" [1] "LS O2 vs. Manifold T: m = 14.845, r^2 = 0.704" [1] "HS O2 vs. Pump Box T: m = 2.491, r^2 = 0.2" [1] "LS O2 vs. Pump Box T: m = 5.526, r^2 = 0.634" [1] "HS CO2 vs. WT P: m = -0.007, r^2 = 0.46" [1] "LS CO2 vs. WT P: m = -0.009, r^2 = 0.53" [1] "HS CO2 vs. SP P: m = -0.00766, r^2 = 0.97" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.105, r^2 = 0.48" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.113, r^2 = 0.48" [1] "LS CO2 vs. SP P: m = -0.00894, r^2 = 0.91" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.155, r^2 = 0.82" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.164, r^2 = 0.82" [1] "HS CO2 vs. WT FL: m = 0.023, r^2 = 0" [1] "LS CO2 vs. WT FL: m = -0.005, r^2 = 0" [1] "HS CO2 vs. SP FL: m = 0.27, r^2 = 0.61" [1] "LS CO2 vs. SP FL: m = 0.278, r^2 = 0.592" [1] "HS O2 vs. SLPDIFF: m = -0.012, r^2 = 0" [1] "LS O2 vs. SLPDIFF: m = -1.111, r^2 = 0.221" [1] "HS O2 vs. WT P: m = 0.011, r^2 = 0" [1] "LS O2 vs. WT P: m = 0.184, r^2 = 0.46" [1] "HS O2 vs. SP P: m = 0.012, r^2 = 0" [1] "LS O2 vs. SP P: m = 0.19, r^2 = 0.459" [1] "HS O2 vs. WT FL: m = 6.003, r^2 = 0.44" [1] "LS O2 vs. WT FL: m = 7.857, r^2 = 0.303" [1] "HS O2 vs. SP FL: m = 1.342, r^2 = 0.05" [1] "LS O2 vs. SP FL: m = -4.315, r^2 = 0.269" [1] "Plotting calibration shapes" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.66" [1] "Median all HS CO2 SD = 0.61" [1] "Median all LS CO2 SD = 0.67" [1] "Median all LT CO2 SD = 0.74" [1] "Median all WT CO2 SD = 0.7" [1] "Median all HS or LS CO2 SD = 0.64" [1] "Median all cal O2 SD = 2.09" [1] "Median all HS O2 SD = 2.07" [1] "Median all LS O2 SD = 2.55" [1] "Median all LT O2 SD = 2.01" [1] "Median all WT O2 SD = 1.67" [1] "Median all HS or LS O2 SD = 2.2" [1] "Median all cal CO2 Slope = 0.01" [1] "Median all HS CO2 Slope = -0.04" [1] "Median all LS CO2 Slope = 0.04" [1] "Median all LT CO2 Slope = 0.06" [1] "Median all WT CO2 Slope = 0.09" [1] "Median all HS or LS CO2 Slope = 0" [1] "Median all cal O2 Slope = 0.25" [1] "Median all HS O2 Slope = 0.27" [1] "Median all LS O2 Slope = 0.33" [1] "Median all LT O2 Slope = 0.39" [1] "Median all WT O2 Slope = -0.04" [1] "Median all HS or LS O2 Slope = 0.27" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 6.37 per meg" [1] "Initial O2 Calibration Offset = 6.41 per meg" [1] "SD of O2 Calibration (post-takeoff) = 6.07 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 7.65 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = 7.65 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO1-2 inlet volumes" [1] "before any lag: 67657.25 96281.83" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 38.7 at 107.8 sccm" [1] "Median O2 delay + tlagff = 39.6 at 107.8 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 37.3 at 107.8 sccm" [1] "Median O2 delay from 3-way + tlagff = 38.2 at 107.8 sccm" [1] "after calc and ff lag: 67615.98 96242" [1] "2025-05-13 11:48:35 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 1 1-Hz values because of data gaps at:" [1] 326.1042 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 18.547620 15.739168 15.739168 15.474877 15.173745 NA NA [8] NA NA NA NA NA NA 12.954185 [15] 12.954185 7.891415 7.891415 8.871365 13.861129 18.114085 18.114085 [22] 14.673118 7.240315 7.232798 7.243208 7.254669 6.795186 6.799539 [29] 6.801589 6.805540 8.934938 8.939228 8.945733 8.952706 12.034983 [36] 13.413438 13.419748 13.425110 13.431203 12.480205 12.486268 12.491992 [43] 12.497675 10.575283 10.112557 10.119361 10.124514 10.130686 9.541392 [50] 9.547460 9.552983 9.558143 11.942254 13.923539 13.928498 13.933393 [57] 13.941397 7.691042 7.696483 7.702403 7.708492 8.427159 8.442078 [64] 8.447758 8.452428 8.457635 10.924995 10.930639 10.935729 10.941367 [71] 12.422744 12.779992 12.785415 12.791071 12.795863 12.752270 12.757437 [78] 12.762760 12.767688 14.095245 14.812090 14.817120 14.821719 14.827079 [85] 14.369728 14.375415 14.380499 14.386855 17.057218 17.062365 17.067842 [92] 17.072367 17.055214 16.841547 16.846696 16.851836 16.856516 10.927960 [99] 10.932839 10.938080 10.942715 10.947977 6.993763 6.999227 7.002758 [106] 7.009226 15.750801 15.755511 15.760839 15.765657 15.770448 10.054706 [113] 10.059263 10.064469 10.070476 10.664705 10.669995 10.674983 10.680158 [120] 11.305850 12.958629 12.963853 12.969084 12.973265 13.743694 13.748921 [127] 13.753598 13.758481 13.204094 11.891012 11.895746 11.900761 11.905180 [134] 10.768951 10.773419 10.778561 10.783151 10.990167 12.076559 12.081884 [141] 12.086030 12.091172 15.549513 15.554491 15.558746 15.563701 12.870158 [148] 9.656436 9.661028 9.665786 9.670586 8.591325 8.596131 8.600926 [155] 8.605612 9.328757 9.787442 9.791943 9.796280 9.800732 10.096102 [162] 10.100344 10.105733 10.110503 8.253524 6.722529 6.727441 6.731429 [169] 6.737295 9.735894 9.740984 9.744872 9.749328 13.035241 13.363456 [176] 13.368001 13.372832 13.376787 15.938623 15.942575 15.947064 15.951489 [183] 15.130232 13.315169 13.319485 13.323633 13.328109 15.797108 15.801727 [190] 15.805731 15.810268 14.276063 13.922327 13.927270 13.931408 12.482059 [197] 7.345400 7.349001 7.353356 7.357245 16.433509 16.437633 16.442123 [204] 16.445912 16.449985 7.834987 7.838868 7.843563 7.847627 12.132385 [211] 12.136787 12.141199 12.145149 12.554850 17.145878 17.149982 17.154365 [218] 17.158190 13.134762 13.138218 13.142862 13.147118 10.359523 7.627647 [225] 7.632118 7.635558 7.639699 9.491746 9.495675 9.499856 9.503687 [232] 11.241915 13.692265 13.696270 13.699471 13.704065 13.155234 13.158185 [239] 13.162929 13.166961 12.905718 11.304496 11.307984 11.312263 11.315298 [246] 8.066002 8.070023 8.074366 8.077974 13.968845 14.586407 14.590276 [253] 14.593816 14.597395 8.702922 8.706800 8.710582 8.714408 9.377590 [260] 9.617647 9.621170 9.624962 9.628007 11.511528 11.512084 11.512084 [267] 11.512084 15.666138 19.742962 19.742962 19.742962 19.742962 8.195753 [274] 4.241574 [1] 226.9664 230.4864 233.6432 236.9137 239.8721 243.1091 246.1337 249.9970 [9] 253.5011 256.8801 260.3730 263.9102 267.3285 270.1816 274.2983 278.0096 [17] 281.1762 284.5957 287.0657 289.6560 292.1590 294.6406 297.9123 301.0666 [25] 304.8431 307.8379 310.3934 311.5307 312.0665 313.0989 314.7252 315.8463 [33] 317.5460 319.3679 320.7213 322.1460 323.7948 325.1959 326.7881 328.2406 [41] 329.8248 331.3205 332.8056 334.3644 335.7226 337.5005 338.8470 340.4597 [49] 342.0148 343.6001 345.0433 346.3917 347.9450 349.4357 350.7314 352.0105 [57] 354.1020 355.2327 356.6546 358.2014 359.7924 361.2460 362.5100 363.9942 [65] 365.2142 366.5749 367.8836 369.3584 370.6886 372.1618 373.3046 374.8286 [73] 376.2454 377.7232 378.9756 380.3807 381.7306 383.1216 384.4092 385.7999 [81] 387.3261 388.6405 389.8421 391.2428 392.7220 394.2080 395.5364 397.1972 [89] 398.4488 399.7938 401.2250 402.4073 403.7546 405.1484 406.4937 407.8368 [97] 409.0597 410.5610 411.8358 413.2053 414.4164 415.7914 417.2501 418.6780 [105] 419.6007 421.2907 422.5502 423.7809 425.1732 426.4322 427.6841 429.1200 [113] 430.3106 431.6711 433.2406 434.4134 435.7958 437.0991 438.4513 439.7691 [121] 440.8050 442.1701 443.5368 444.6294 446.0137 447.3793 448.6014 449.8774 [129] 451.1858 452.4318 453.6690 454.9793 456.1340 457.4520 458.6193 459.9630 [137] 461.1625 462.4770 463.6305 465.0218 466.1051 467.4488 468.9492 470.2501 [145] 471.3618 472.6567 473.9542 475.1475 476.3473 477.5906 478.8447 480.0147 [153] 481.2705 482.5235 483.7480 484.9600 486.0777 487.2539 488.3873 489.5505 [161] 490.7977 491.9061 493.3143 494.5606 495.5700 496.7579 498.0413 499.0835 [169] 500.6163 501.6706 503.0008 504.0167 505.1810 506.3291 507.6354 508.8229 [177] 510.0852 511.1187 512.2885 513.3212 514.4942 515.6505 516.4323 517.9431 [185] 519.0708 520.1545 521.3242 522.3553 523.5624 524.6086 525.7941 526.9102 [193] 527.9900 529.2815 530.3629 531.6652 532.9698 533.9107 535.0486 536.0649 [201] 537.2662 538.3438 539.5169 540.5070 541.5714 542.8360 543.8503 545.0769 [209] 546.1389 546.9721 548.1225 549.2752 550.3074 551.4938 552.6052 553.6776 [217] 554.8227 555.8224 556.8959 557.7989 559.0125 560.1247 561.3016 562.3300 [225] 563.4983 564.3971 565.4793 566.5348 567.5616 568.6542 569.6552 570.6627 [233] 571.6605 572.7070 573.5434 574.7436 575.8286 576.5999 577.8395 578.8929 [241] 579.8330 581.0670 581.9786 583.0967 583.8897 584.9604 586.0111 587.1460 [249] 588.0886 589.3846 590.3752 591.3860 592.3110 593.2463 594.2113 595.2247 [257] 596.2130 597.2127 598.1614 599.1422 600.0628 601.0537 601.8494 603.0136 [265] 603.9060 605.1728 606.1933 607.0583 607.9825 609.0787 610.0084 610.9600 [273] 611.9079 612.8982 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 26836 records [1] 10 2683 26836 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -267.19 -276.39 -270.38 -270.28 -259.94 [1] 25824 [1] "Average Date / Time for slice RF10 = 2009-11-21 22:58:36.2900273799896" [1] "sum(lsel) = 2186" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 8.282104 853.362778 [1] 8.282104 853.362778 [1] 146.6372 991.7179 [1] 9.207429e-03 9.999990e+05 [1] "highestmid = 670.207275" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF10 APO_AO2 range = -282.69,-221.34" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 26836 records [1] 10 2683 26836 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -505.60 -513.90 -507.22 -506.03 -494.42 [1] 25832 [1] "Average Date / Time for slice RF10 = 2009-11-21 22:58:36.2900273799896" [1] "sum(lsel) = 2186" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 8.282104 853.362778 [1] 8.282104 853.362778 [1] 146.6372 991.7179 [1] 9.207429e-03 9.999990e+05 [1] "highestmid = 670.207275" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF10 O2_AO2 range = -517.05,-418.83" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 26836 records [1] 10 2683 26836 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA 395.548 395.067 395.126 394.694 394.812 [1] 25844 [1] "Average Date / Time for slice RF10 = 2009-11-21 22:58:44.9613108634949" [1] "sum(lsel) = 2197" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 8.282104 853.362778 [1] 8.282104 853.362778 [1] 146.6372 991.7179 [1] 9.207429e-03 9.999990e+05 [1] "highestmid = 670.207275" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF10 CO2_AO2 range = 382.54,395.5" [1] "done outputting" [1] "done plotting" [1] "making html" [1] "making index html"