[1] "2025-05-13 11:44:59 MDT" options [1,] "file" "091119a" [2,] "flight" "RF09" [3,] "project" "HIPPO2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "091119a" [1] "Reading in flight and plotting intervals" Read 10 records [1] "Reading in /scr/raf/stephens/AO2DAT/091119a.mr" Read 12959 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.16 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.2 seconds" [1] "New JOGEST = 2.2 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/091119a.hr" Read 51836 records [1] "HR FILE MATCHES" [1] "Converting hrdata statout" [1] "Tue May 13 11:44:59 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.05 O2 = -392.3" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.27 O2 = -1012.7" [1] "position 3 cylinder OK30054 description: LT CO2 = 384.89 O2 = -842.4" [1] "position 4 cylinder OK170199 description: WT CO2 = 384.89 O2 = -787.1" [1] 337.0516 410.2719 384.8886 384.8894 NA [1] -392.2889 -1012.6718 -842.4413 -787.0866 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.963 co2off = 27.18 o2scla = -0.047 o2offa = -50.3" [1] "(dV/V)/(dXO2/XO2) = -4.471" [1] "(dV/V)/d(O2/N2) = -3.535" [1] "Reading in very high resolution timeseries" Read 259180 records [1] 259180 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:45:00 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:45:02 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.535" [1] "o2scaleavenew_drelVdrelP = -4.471" [1] "median(o2scalenew) = -3.541" [1] "Empirical dV/V vs dP/P relationship =-3.493, r^2 =0.004, damping =0.781" [1] "Tue May 13 11:45:02 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:45:38 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "RECALC TIME MATCHES" [1] "Tue May 13 11:45:38 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 208 medium-rate record(s) > eco or < ico" [1] "from: 1" [1] "to: 23" [1] "from: 12775" [1] "to: 12959" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 3475 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 163.957 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 126.586 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 126.74 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.421 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 21 [1] 184 [1] 200 [1] 200 [1] 200 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 60 323.8220 1677.5871 1029243.9 -1 [2,] 61 323.8221 1043.8801 1027534.8 1 [3,] 62 323.8221 389.6078 1027963.1 -1 [4,] 138 323.8244 511.8347 1029276.5 -1 [5,] 139 323.8245 1552.9591 1028713.7 1 [6,] 140 323.8245 2561.9201 1031411.0 -1 [7,] 216 323.8268 2633.8656 1032429.1 -1 [8,] 217 323.8268 2339.0100 1029712.0 1 [9,] 218 323.8269 2046.7314 1031857.5 -1 [10,] 296 323.8293 1413.4056 1032118.5 -1 [11,] 297 323.8293 1096.5187 1030680.8 1 [12,] 298 323.8293 833.6027 1031569.2 -1 [13,] 320 323.8300 1404.4386 1032422.1 -1 [14,] 321 323.8300 1896.6965 1030954.4 1 [15,] 322 323.8301 2224.5028 1033306.0 -1 [16,] 336 323.8305 856.1330 1032287.9 -1 [17,] 337 323.8305 1122.8570 1031370.1 1 [18,] 338 323.8305 1401.0974 1032838.3 -1 [19,] 342 323.8307 1586.1502 1033146.5 -1 [20,] 343 323.8307 1329.4630 1031524.0 1 [21,] 344 323.8307 1031.4278 1032615.4 -1 [22,] 354 323.8310 507.3032 1032332.5 -1 [23,] 355 323.8311 620.2647 1031819.7 1 [24,] 356 323.8311 939.6369 1032886.1 -1 [25,] 357 323.8311 1521.5392 1031889.3 1 [26,] 358 323.8312 2051.1681 1034091.4 -1 [27,] 360 323.8312 2086.7683 1034106.5 -1 [28,] 361 323.8313 1629.6670 1031965.2 1 [29,] 362 323.8313 1254.9136 1033317.3 -1 [30,] 372 323.8316 1460.9133 1033829.3 -1 [31,] 373 323.8316 1520.4631 1032314.6 1 [32,] 374 323.8316 1911.7674 1034393.8 -1 [33,] 375 323.8317 2811.9209 1032374.6 1 [34,] 376 323.8317 3638.1805 1036223.6 -1 [35,] 380 323.8318 4350.5612 1037009.3 -1 [36,] 381 323.8319 3644.8038 1032542.4 1 [37,] 382 323.8319 2703.2057 1035364.7 -1 [38,] 383 323.8319 2181.8314 1032590.6 1 [39,] 384 323.8320 1870.2994 1034549.1 -1 [40,] 385 323.8320 1587.4628 1032631.1 1 [41,] 386 323.8320 1282.9527 1034000.0 -1 [42,] 387 323.8320 1181.3519 1032672.0 1 [43,] 388 323.8321 1695.9447 1034503.6 -1 [44,] 389 323.8321 3107.3572 1032705.1 1 [45,] 390 323.8321 4555.2099 1037594.7 -1 [46,] 392 323.8322 4762.6768 1037696.7 -1 [47,] 393 323.8322 3405.6311 1032844.1 1 [48,] 394 323.8323 1959.3073 1034888.3 -1 [49,] 395 323.8323 1287.2170 1032894.6 1 [50,] 396 323.8323 1077.7114 1034038.9 -1 [51,] 424 323.8332 687.9918 1034338.0 -1 [52,] 425 323.8332 1040.6155 1033616.6 1 [53,] 426 323.8332 1359.6266 1035092.4 -1 [54,] 434 323.8335 967.4742 1034844.7 -1 [55,] 435 323.8335 1237.1064 1033822.4 1 [56,] 436 323.8335 1453.0807 1035369.1 -1 [57,] 478 323.8348 1006.3113 1036089.4 -1 [58,] 479 323.8349 1163.8762 1035049.8 1 [59,] 480 323.8349 1453.7658 1036636.7 -1 [60,] 481 323.8349 1940.3360 1035118.1 1 [61,] 482 323.8349 2467.0349 1037781.7 -1 [62,] 483 323.8350 2933.2672 1035198.2 1 [63,] 484 323.8350 3182.5568 1038567.0 -1 [64,] 486 323.8351 2941.0826 1038353.5 -1 [65,] 487 323.8351 2701.6853 1035306.7 1 [66,] 488 323.8351 2363.5538 1037813.1 -1 [67,] 489 323.8352 1905.8373 1035392.2 1 [68,] 490 323.8352 1450.1507 1036912.7 -1 [69,] 506 323.8357 776.5340 1036436.8 -1 [70,] 507 323.8357 1050.9527 1035635.5 1 [71,] 508 323.8357 1254.1831 1036987.5 -1 [72,] 611 323.8389 589.9433 1037754.7 1 [73,] 612 323.8389 652.0729 1038312.0 -1 [74,] 613 323.8390 737.4760 1037443.8 1 [75,] 1184 323.8542 521.2051 1031059.8 -1 [76,] 1186 323.8542 528.9633 1031021.9 -1 [77,] 1187 323.8543 711.5057 1030445.4 1 [78,] 1188 323.8543 1268.5293 1031866.4 -1 [79,] 1189 323.8543 1979.7915 1030421.9 1 [80,] 1190 323.8543 2602.6244 1033115.9 -1 [81,] 1264 323.8563 2681.0916 1031785.9 -1 [82,] 1265 323.8563 2378.8025 1028975.6 1 [83,] 1266 323.8563 1818.2422 1030736.1 -1 [84,] 1267 323.8563 1057.9952 1028932.7 1 [85,] 1268 323.8564 470.9630 1029411.4 -1 [86,] 1743 323.8685 466.9830 1024628.2 1 [87,] 1744 323.8685 430.5644 1024978.5 -1 [88,] 1745 323.8685 481.4011 1024419.3 1 [89,] 2528 323.8888 546.3453 1014339.2 -1 [90,] 2534 323.8890 343.3310 1013992.7 -1 [91,] 2610 323.8909 585.3271 1012647.1 -1 [92,] 2611 323.8909 1572.4834 1011941.0 1 [93,] 2612 323.8909 2494.7983 1014488.9 -1 [94,] 2686 323.8928 2641.7014 1012663.6 -1 [95,] 2687 323.8928 2564.5526 1009937.0 1 [96,] 2688 323.8929 2161.3327 1012053.8 -1 [97,] 2689 323.8929 1388.1259 1009883.1 1 [98,] 2690 323.8929 686.6491 1010561.2 -1 [99,] 3864 323.9238 535.3732 1004537.6 -1 [100,] 3866 323.9238 506.1102 1004515.2 -1 [101,] 3867 323.9238 1155.2369 1003976.4 1 [102,] 3868 323.9239 1907.3706 1005985.0 -1 [103,] 3869 323.9239 2411.9239 1003949.8 1 [104,] 3870 323.9239 2611.6583 1006584.8 -1 [105,] 3944 323.9261 2654.4151 1005711.4 -1 [106,] 3945 323.9262 1881.1513 1003027.6 1 [107,] 3946 323.9262 991.2197 1003929.0 -1 [108,] 3947 323.9262 513.3568 1002985.7 1 [109,] 3948 323.9262 347.0112 1003325.1 -1 [110,] 4022 323.9284 205.7070 1002245.9 -1 [111,] 4023 323.9285 779.4955 1002020.4 1 [112,] 4024 323.9285 1450.8456 1003533.8 -1 [113,] 4026 323.9285 1874.1841 1003896.0 -1 [114,] 4100 323.9307 1956.0259 1003321.6 -1 [115,] 4101 323.9308 1419.6561 1001328.1 1 [116,] 4102 323.9308 840.9411 1002151.9 -1 [117,] 5058 323.9585 604.3017 1001607.5 -1 [118,] 5064 323.9587 263.1427 1001144.6 -1 [119,] 5140 323.9610 366.0037 999877.0 -1 [120,] 5141 323.9610 1433.0136 999456.4 1 [121,] 5142 323.9610 2489.7645 1001954.8 -1 [122,] 5218 323.9633 2545.4154 1000683.8 -1 [123,] 5219 323.9633 2177.2339 998119.1 1 [124,] 5220 323.9633 1825.3265 999933.3 -1 [125,] 5296 323.9656 1533.2121 999190.0 -1 [126,] 5297 323.9656 1070.6681 997705.9 1 [127,] 5298 323.9656 648.5982 998341.3 -1 [128,] 6312 323.9932 560.2582 996567.6 -1 [129,] 6314 323.9932 555.1968 996537.1 -1 [130,] 6315 323.9933 741.8350 995962.2 1 [131,] 6316 323.9933 1160.6059 997217.3 -1 [132,] 6317 323.9933 1897.2336 995969.7 1 [133,] 6318 323.9933 2503.8587 998490.0 -1 [134,] 6392 323.9952 2645.4150 998529.6 -1 [135,] 6393 323.9953 2514.0687 995867.5 1 [136,] 6394 323.9953 2050.1341 997824.3 -1 [137,] 6395 323.9953 1188.3443 995859.9 1 [138,] 6396 323.9953 408.9759 996253.9 -1 [139,] 7117 324.0136 538.9422 1000608.2 1 [140,] 7118 324.0137 402.1215 1001197.9 -1 [141,] 7119 324.0137 382.9670 1000964.3 1 [142,] 7149 324.0145 398.2047 1000716.4 1 [143,] 7150 324.0145 381.7978 1000961.7 -1 [144,] 7151 324.0145 502.9363 1000408.2 1 [145,] 7177 324.0152 622.1119 1000068.3 1 [146,] 7178 324.0152 569.5635 1000836.5 -1 [147,] 7179 324.0152 493.4211 1000367.3 1 [148,] 7317 324.0187 442.5790 998531.8 1 [149,] 7318 324.0188 467.1646 998805.5 -1 [150,] 7319 324.0188 563.0229 998207.2 1 [151,] 7680 324.0279 313.3527 996056.7 -1 [152,] 7756 324.0299 206.0336 996873.9 -1 [153,] 7757 324.0299 1079.5713 996681.5 1 [154,] 7758 324.0299 2082.0694 998850.9 -1 [155,] 7760 324.0300 2552.3146 999315.9 -1 [156,] 7834 324.0319 2652.3091 1000512.3 -1 [157,] 7835 324.0319 2404.3051 997880.7 1 [158,] 7836 324.0319 2107.0646 1000009.5 -1 [159,] 7912 324.0338 1938.4062 1000782.3 -1 [160,] 7913 324.0339 1476.8977 998844.0 1 [161,] 7914 324.0339 929.5039 999759.1 -1 [162,] 8439 324.0472 504.2235 997437.9 1 [163,] 8440 324.0473 460.9926 997971.7 -1 [164,] 8441 324.0473 533.0706 997651.8 1 [165,] 9038 324.0624 564.3885 999173.8 -1 [166,] 9042 324.0625 964.8667 999686.4 -1 [167,] 9043 324.0626 1757.4937 998660.7 1 [168,] 9044 324.0626 2487.6856 1001179.7 -1 [169,] 9120 324.0645 2237.0083 1001392.3 -1 [170,] 9121 324.0645 1271.8214 999240.6 1 [171,] 9122 324.0646 422.6724 999601.5 -1 [172,] 10400 324.0971 521.4833 992125.6 -1 [173,] 10406 324.0972 221.2626 991880.8 -1 [174,] 10480 324.0991 196.7468 992912.5 -1 [175,] 10481 324.0991 509.9071 992738.3 1 [176,] 10482 324.0991 1089.9090 993952.0 -1 [177,] 10483 324.0992 1865.2141 992772.3 1 [178,] 10484 324.0992 2499.5433 995296.3 -1 [179,] 10560 324.1011 2162.7412 995891.0 -1 [180,] 10562 324.1012 1789.0970 995568.6 -1 [181,] 10636 324.1030 1724.8013 996236.2 -1 [182,] 10637 324.1031 1512.6211 994524.0 1 [183,] 10638 324.1031 1197.9400 995691.2 -1 [184,] 11764 324.1317 535.7467 994661.2 -1 [185,] 11768 324.1318 816.8100 995003.2 -1 [186,] 11769 324.1318 1659.1747 994128.1 1 [187,] 11770 324.1318 2464.6832 996592.6 -1 [188,] 11844 324.1337 2639.0404 996929.3 -1 [189,] 11845 324.1337 2198.7008 994287.3 1 [190,] 11846 324.1338 1481.8483 995678.1 -1 [191,] 11847 324.1338 794.4624 994324.2 1 [192,] 11848 324.1338 341.4101 994632.6 -1 [193,] 11922 324.1357 189.5592 994783.9 -1 [194,] 11923 324.1357 336.8635 994600.8 1 [195,] 11924 324.1358 668.8127 995350.6 -1 [196,] 11925 324.1358 1236.9877 994643.5 1 [197,] 11926 324.1358 1805.7810 996469.6 -1 [198,] 12002 324.1377 1529.0955 996218.1 -1 [199,] 12003 324.1378 1061.6080 994750.5 1 [200,] 12004 324.1378 676.3568 995436.9 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 802 323.8443 9.255974e+08 [2,] 3307 323.9086 2.805740e+02 [3,] 6375 323.9948 9.980976e+08 [4,] 6959 324.0096 9.430970e+11 [5,] 8643 324.0524 9.408788e+05 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 163.957 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 63.519 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 62.76 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -19.421 PER MEG" [1] 337.0516 410.2719 384.8886 384.8894 NA [1] -392.2889 -1012.6718 -842.4413 -787.0866 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.967 co2off = 25.72 o2scla = -0.047 o2offa = -50.7" [1] "(dV/V)/(dXO2/XO2) = -4.468" [1] "(dV/V)/d(O2/N2) = -3.533" [1] "Finding cal and sample periods" [1] "Median Cal: 2.82 minutes" [1] "Average Cal: 2.97 minutes" [1] "Shortest Cal: 2.38 minutes" [1] "Longest Cal: 3.4 minutes" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00664" [1] "HS CO2 vs. PACAB: m = -0.0061, r^2 = 0.62" [1] "LS CO2 vs. PACAB: m = -0.00717, r^2 = 0.71" [1] "HS+LS LIH2O vs. PACAB: m = -0.000793" [1] "HS LIH2O vs. PACAB: m = -0.000891, r^2 = 0.86" [1] "LS LIH2O vs. PACAB: m = -0.000694, r^2 = 0.66" [1] "HS+LS CO2 vs. LIH2O: m = 8.27" [1] "HS CO2 vs. LIH2O: m = 8.29, r^2 = 0.89" [1] "LS CO2 vs. LIH2O: m = 8.24, r^2 = 0.57" [1] "APCO2 vs. PACAB: m = -0.0288, r^2 = 0.05" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.0448" [1] "HS O2 vs. PACAB: m = 0.0179, r^2 = 0.03" [1] "LS O2 vs. PACAB: m = 0.0718, r^2 = 0.08" [1] "HS+LS O2 vs. LIH2O: m = -90.8" [1] "HS O2 vs. LIH2O: m = -6.45, r^2 = 0" [1] "LS O2 vs. LIH2O: m = -175, r^2 = 0.33" [1] "HS+LS O2 vs. PAO2: m = -7.66" [1] "HS O2 vs. PAO2: m = 12.4, r^2 = 0.23" [1] "LS O2 vs. PAO2: m = -27.7, r^2 = 0.16" [1] "HS+LS O2 vs. TPBOX: m = 1.7" [1] "HS O2 vs. TPBOX: m = -0.874, r^2 = 0.02" [1] "LS O2 vs. TPBOX: m = 4.27, r^2 = 0.11" [1] "APO vs. PACAB: m = 0.517, r^2 = 0.05" [1] "APO vs. PAO2: m = -72.2, r^2 = 0.07" [1] "APO vs. TPBOX: m = 7.68, r^2 = 0.02" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 12, r^2 = 0.2" [1] "LS CO2 vs. LiCor Cell P: m = 14.3, r^2 = 0.31" [1] "HS CO2 vs. CO2 Vol P: m = 2.7, r^2 = 0.25" [1] "LS CO2 vs. CO2 Vol P: m = 1.42, r^2 = 0.1" [1] "HS CO2 vs. SLOPE: m = 2.27, r^2 = 0.26" [1] "LS CO2 vs. SLOPE: m = -0.795, r^2 = 0.02" [1] "HS O2 vs. O2 Vol P: m = 30.3, r^2 = 0.33" [1] "LS O2 vs. O2 Vol P: m = -3.83, r^2 = 0" [1] "HS O2 vs. O2 Cell T: m = -14.5, r^2 = 0.62" [1] "LS O2 vs. O2 Cell T: m = -7.72, r^2 = 0.09" [1] "HS O2 vs. CO2 Vol P: m = -29.5, r^2 = 0.18" [1] "LS O2 vs. CO2 Vol P: m = -70.7, r^2 = 0.65" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 2.2, r^2 = 0.01" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 20.8, r^2 = 0.25" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -29.5, r^2 = 0.18" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -70.7, r^2 = 0.65" [1] "HS O2 vs. LIH2O: m = -74.9, r^2 = 0.11" [1] "LS O2 vs. LIH2O: m = -222, r^2 = 0.29" [1] "HS O2 vs. SLOPE: m = 0.274, r^2 = 0.03" [1] "LS O2 vs. SLOPE: m = 0.673, r^2 = 0.17" [1] "HS CO2 vs. Time: m = 23.401, r^2 = 0.91" [1] "LS CO2 vs. Time: m = 24.518, r^2 = 0.93" [1] "HS CO2 vs. Cylinder T: m = -2.102, r^2 = 0.62" [1] "LS CO2 vs. Cylinder T: m = -2.391, r^2 = 0.774" [1] "HS CO2 vs. Regulator T: m = -0.51, r^2 = 0.1" [1] "LS CO2 vs. Regulator T: m = -0.443, r^2 = 0.082" [1] "HS CO2 vs. Ref. Volumes T: m = 1.792, r^2 = 0.43" [1] "LS CO2 vs. Ref. Volumes T: m = 1.962, r^2 = 0.576" [1] "HS CO2 vs. Manifold T: m = 0.928, r^2 = 0.26" [1] "LS CO2 vs. Manifold T: m = 0.915, r^2 = 0.281" [1] "HS CO2 vs. Pump Box T: m = 0.324, r^2 = 0.07" [1] "LS CO2 vs. Pump Box T: m = 0.06, r^2 = 0.004" [1] "HS O2 vs. Cylinder T: m = 33.17, r^2 = 0.9" [1] "LS O2 vs. Cylinder T: m = 21.955, r^2 = 0.181" [1] "HS O2 vs. Regulator T: m = 11.112, r^2 = 0.27" [1] "LS O2 vs. Regulator T: m = 11.246, r^2 = 0.147" [1] "HS O2 vs. Ref. Volumes T: m = -29.381, r^2 = 0.68" [1] "LS O2 vs. Ref. Volumes T: m = -30.148, r^2 = 0.377" [1] "HS O2 vs. Manifold T: m = -16.144, r^2 = 0.45" [1] "LS O2 vs. Manifold T: m = -1.38, r^2 = 0.002" [1] "HS O2 vs. Pump Box T: m = -0.948, r^2 = 0" [1] "LS O2 vs. Pump Box T: m = 5.324, r^2 = 0.089" [1] "HS CO2 vs. WT P: m = -0.012, r^2 = 0.57" [1] "LS CO2 vs. WT P: m = -0.013, r^2 = 0.562" [1] "HS CO2 vs. SP P: m = -0.00708, r^2 = 0.54" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.161, r^2 = 0.68" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.176, r^2 = 0.68" [1] "LS CO2 vs. SP P: m = -0.00698, r^2 = 0.69" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.085, r^2 = 0.6" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.1, r^2 = 0.6" [1] "HS CO2 vs. WT FL: m = 0.393, r^2 = 0.09" [1] "LS CO2 vs. WT FL: m = 0.746, r^2 = 0.359" [1] "HS CO2 vs. SP FL: m = 0.38, r^2 = 0.72" [1] "LS CO2 vs. SP FL: m = 0.393, r^2 = 0.74" [1] "HS O2 vs. SLPDIFF: m = 0.503, r^2 = 0.16" [1] "LS O2 vs. SLPDIFF: m = -0.294, r^2 = 0.039" [1] "HS O2 vs. WT P: m = 0.079, r^2 = 0.15" [1] "LS O2 vs. WT P: m = 0.099, r^2 = 0.096" [1] "HS O2 vs. SP P: m = 0.081, r^2 = 0.15" [1] "LS O2 vs. SP P: m = 0.099, r^2 = 0.089" [1] "HS O2 vs. WT FL: m = -10.672, r^2 = 0.39" [1] "LS O2 vs. WT FL: m = -9.394, r^2 = 0.158" [1] "HS O2 vs. SP FL: m = -3.261, r^2 = 0.31" [1] "LS O2 vs. SP FL: m = -4.024, r^2 = 0.215" [1] "Plotting calibration shapes" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.65" [1] "Median all HS CO2 SD = 0.65" [1] "Median all LS CO2 SD = 0.71" [1] "Median all LT CO2 SD = 0.65" [1] "Median all WT CO2 SD = 0.63" [1] "Median all HS or LS CO2 SD = 0.65" [1] "Median all cal O2 SD = 2.49" [1] "Median all HS O2 SD = 2.45" [1] "Median all LS O2 SD = 2.6" [1] "Median all LT O2 SD = 2.73" [1] "Median all WT O2 SD = 2.36" [1] "Median all HS or LS O2 SD = 2.52" [1] "Median all cal CO2 Slope = 0.02" [1] "Median all HS CO2 Slope = -0.05" [1] "Median all LS CO2 Slope = 0.05" [1] "Median all LT CO2 Slope = -0.02" [1] "Median all WT CO2 Slope = 0.05" [1] "Median all HS or LS CO2 Slope = 0" [1] "Median all cal O2 Slope = 0.71" [1] "Median all HS O2 Slope = 0.98" [1] "Median all LS O2 Slope = 1.5" [1] "Median all LT O2 Slope = -1.03" [1] "Median all WT O2 Slope = 0.37" [1] "Median all HS or LS O2 Slope = 1.04" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 7.37 per meg" [1] "Initial O2 Calibration Offset = -19.5 per meg" [1] "SD of O2 Calibration (post-takeoff) = 4.52 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -19.93 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -19.93 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO1-2 inlet volumes" [1] "before any lag: 70867.27 100240.07" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 38.6 at 108.2 sccm" [1] "Median O2 delay + tlagff = 39.5 at 108.2 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 37.1 at 108.2 sccm" [1] "Median O2 delay from 3-way + tlagff = 38 at 108.2 sccm" [1] "after calc and ff lag: 70827.16 100199.25" [1] "2025-05-13 11:46:25 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 26 1-Hz values because of data gaps at:" [1] 324.1598 324.1598 324.1598 324.1598 324.1598 324.1598 324.1598 324.1599 [9] 324.1599 324.1599 324.1599 324.1599 324.1599 324.1599 324.1599 324.1600 [17] 324.1600 324.1600 324.1600 324.1600 324.1600 324.1600 324.1600 324.1600 [25] 324.1601 324.1601 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 1.13950551 1.69621301 3.15780060 3.75681694 3.75681694 [6] 3.41491870 3.75141096 3.76017130 3.76017130 -1.41226275 [11] -2.41039233 -6.16041378 -6.16041378 -6.69335321 -7.07655343 [16] -3.12464689 -2.98265117 -2.98265117 -0.52886994 -1.01023196 [21] -2.47555126 -2.47555126 -3.07666588 -3.09929810 -2.44867139 [26] -2.31336477 -2.31336477 -6.44195098 -8.23520398 -9.49145325 [31] -9.49145325 -4.53711176 -0.34999926 2.52237384 2.97974141 [36] 2.97974141 -4.20550414 -3.64095917 -3.60993659 -3.60993659 [41] -2.31814760 -2.28490466 -2.11736815 -2.11736815 -2.11736815 [46] 0.83825121 -2.34740134 -2.96437942 -2.96437942 -3.64865413 [51] -4.18982673 -4.86799731 -4.86799731 -4.86799731 -1.51071219 [56] 1.37152681 3.46917546 3.46917546 5.60138651 7.37450216 [61] 8.30009396 8.30009396 8.30009396 3.22691596 -0.24986707 [66] -1.67914787 -1.67914787 5.52669924 4.39530706 4.07893004 [71] 4.07893004 4.62621524 5.56478232 6.37662302 6.37662302 [76] 6.37662302 0.34579581 0.28680552 0.25769778 0.25769778 [81] 0.45168110 NA NA NA NA [86] 4.00568525 4.00785712 4.01003223 4.01003223 0.97433797 [91] -1.62328747 -6.43531598 -6.43531598 -6.43531598 -0.92924066 [96] 0.52326001 2.05294907 2.05294907 0.64497697 0.32751381 [101] 1.28212309 1.40586270 1.40586270 8.00821897 7.58143074 [106] 7.38685021 7.38685021 6.64128569 5.20965370 6.56933110 [111] 7.61276097 7.61276097 5.72781300 3.42940634 2.99422412 [116] 2.99422412 0.95527902 -0.32303939 -1.40966065 -2.11241604 [121] -1.97227755 -1.07368017 0.21658021 0.41831966 0.41831966 [126] 4.16574076 3.87902871 1.67135308 1.67135308 1.37750240 [131] -0.19059843 1.02586480 2.19823109 2.19823109 -0.04466043 [136] -0.10557058 -0.25582156 -0.25582156 1.16211465 2.09111523 [141] 4.83073020 5.61732025 5.61732025 0.48193162 -1.06527423 [146] -3.13339690 -3.13339690 0.05520941 -0.61850145 -3.63872804 [151] -4.31137691 -3.40766105 -1.81832035 2.83182170 3.14262004 [156] 3.14262004 -3.47187291 -2.21618256 0.30042050 0.30042050 [161] 2.57967645 8.07094219 8.42841854 8.52444599 8.52444599 [166] 4.04713318 3.86199866 3.52178208 3.52178208 2.86635848 [171] 0.80760211 -2.15684399 -4.88457239 -4.88457239 0.77193444 [176] 4.03821863 6.27201696 6.27201696 -1.33415273 -1.33415273 [181] -3.08425059 -3.99204334 -3.99204334 -1.52655787 -4.45856198 [186] -5.92725978 -6.06857209 -6.28347586 -6.55927754 -5.69855873 [191] -5.55801888 -5.55801888 -5.29625924 -5.10487374 -4.59382040 [196] -4.59382040 -3.33581543 -2.93338861 -4.21173810 -4.50972110 [201] -5.12268974 -7.95676177 -8.42191011 -8.78378920 -8.78378920 [206] -11.99890542 -10.99417933 -8.14789455 -8.14789455 -8.59728902 [211] -10.32603353 -9.30232112 -7.81587822 -7.81587822 -0.04940696 [216] 0.51668304 1.38190627 1.59051320 1.02044703 -5.78652263 [221] -5.16345987 -4.82848599 -4.82848599 0.10693706 -1.39032369 [226] -5.59612442 -6.00020992 -3.74937641 -1.75686557 -1.68637840 [231] -1.68637840 -1.68637840 -5.51204732 -4.98421113 -1.57736315 [236] -1.57736315 -5.00994075 -6.96144442 -7.55691934 -7.69719710 [241] -7.69719710 6.27888860 4.77541713 3.04714756 3.04714756 [246] 3.51989970 3.89215954 4.42158178 4.79563148 4.79563148 [251] 4.05582404 3.20541433 0.32983607 0.32983607 -5.39943503 [256] -3.51070461 -0.45366511 1.14866386 1.14866386 0.82887111 [261] -6.92094550 -11.58200204 -11.58200204 -9.52801447 -9.52801447 [266] -2.68509296 -1.14424937 -1.14424937 0.18509570 -0.04239265 [271] -0.10297794 -0.11115668 -2.90245467 -2.90245467 2.73426783 [276] 3.08509517 3.19567614 5.61453773 3.79322452 0.75775474 [281] 0.54411202 3.50366100 3.14846608 2.08068461 2.08068461 [286] -2.86412982 -5.28084074 -4.69836087 -3.67021809 -3.67021809 [291] -1.28611468 -4.42122266 -7.82048496 -7.82048496 -10.33109265 [296] -12.02960479 -10.50825225 -8.43171344 -8.43171344 -0.54948677 [301] 0.28460456 2.21394348 3.15053085 -2.00685874 -5.42325045 [306] -9.78306400 -12.88678609 -12.88678609 -12.53273982 -11.96690633 [311] -10.80284973 [1] 203.7540 205.4353 207.0172 208.3961 210.4684 212.2976 213.9089 215.7784 [9] 217.2345 218.8536 220.6217 222.6951 224.5563 226.0094 227.3899 229.4622 [17] 231.2190 232.7208 234.0952 235.7635 237.7853 239.8201 241.3061 242.9082 [25] 244.4431 246.2618 247.8472 249.2504 250.9179 252.5217 254.5171 256.1374 [33] 257.7543 259.0660 260.5554 262.3635 263.9486 265.6502 267.3113 268.8940 [41] 270.7434 272.3716 273.9613 275.6448 277.3693 278.6759 280.4018 281.8583 [49] 283.3375 284.7652 286.3646 288.0535 289.2881 291.1199 292.6690 294.1794 [57] 295.8119 297.3741 298.9950 300.5302 302.0720 303.5469 305.0491 306.6082 [65] 308.1452 310.0257 311.5123 313.1176 314.4357 316.1354 317.6571 319.1867 [73] 320.7126 322.1969 323.6540 325.3842 326.9325 328.3893 329.9025 331.3330 [81] 332.8875 334.5206 335.7942 337.3619 338.7650 340.2265 341.7675 343.2895 [89] 344.8383 346.0776 347.0692 348.8845 350.6325 351.9643 353.4202 354.7597 [97] 356.2578 357.2594 358.8213 360.5025 361.7696 363.0601 364.6307 366.0069 [105] 367.4856 368.7044 370.0759 371.0592 372.5977 373.9814 375.3670 376.8543 [113] 378.3307 379.7799 380.9970 382.5118 383.8025 385.3531 386.6312 388.1512 [121] 389.4700 390.8899 392.2931 393.8073 395.1176 396.4635 397.8318 399.0454 [129] 400.5855 401.8590 403.2000 404.5560 405.9830 407.4066 409.0181 410.2497 [137] 411.4185 412.8349 414.5210 416.1475 417.3700 418.7662 420.1201 421.2300 [145] 422.5768 424.1083 425.5002 426.8018 428.1782 429.5134 430.9383 432.2451 [153] 433.3918 434.7221 435.9728 437.2348 438.4302 439.9837 441.1740 442.5383 [161] 443.8355 445.1423 446.5876 447.6128 448.8651 450.1834 451.3609 452.5545 [169] 453.8976 455.0269 456.3414 457.7631 459.3596 460.5211 461.7503 463.0375 [177] 464.2238 465.4936 466.9899 467.8444 469.2816 470.3211 471.6505 472.8227 [185] 474.1317 475.2642 476.6475 477.7294 478.9870 480.0992 481.2050 482.3563 [193] 483.5892 484.9258 486.1194 487.4186 488.3219 489.5997 490.9534 492.6621 [201] 493.6226 494.8026 496.0933 497.0968 498.3831 499.4929 500.5712 501.8882 [209] 503.1037 504.2342 505.2772 506.3800 507.5506 508.9050 509.9580 511.1326 [217] 512.3861 513.5254 514.5990 515.8599 516.8964 518.1899 519.3409 520.4540 [225] 521.4484 522.8794 524.0711 525.0597 526.3657 527.6700 528.6426 529.8536 [233] 530.9476 532.0160 533.1719 534.5037 535.3326 536.5872 537.6541 538.8260 [241] 540.0260 541.0118 542.1374 543.1894 544.2705 545.4008 546.5435 547.5454 [249] 548.7731 549.7715 550.6326 551.7941 553.0387 554.4328 555.4242 556.4445 [257] 557.4333 558.3626 559.4879 560.5006 561.5986 562.6203 563.7602 564.8293 [265] 565.8017 566.8460 567.8961 568.8981 570.1339 571.1548 572.1352 573.2562 [273] 574.1952 575.1942 576.3096 577.3792 578.3729 579.3892 580.1996 581.5050 [281] 582.8121 583.8344 584.8128 585.7614 586.7111 587.7906 588.7700 589.8738 [289] 590.8759 591.9051 592.8964 593.9274 594.8896 595.8945 596.8655 597.7485 [297] 598.7184 599.8371 600.7214 601.6530 602.6976 603.6781 604.6897 605.7250 [305] 606.6216 607.6176 608.5897 609.7613 610.7789 611.6941 612.7392 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 27751 records [1] 9 2775 27751 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -267.19 -276.39 -270.38 -270.28 -259.94 [1] 25817 [1] "Average Date / Time for slice RF09 = 2009-11-19 23:58:28.781346321106" [1] "sum(lsel) = 2273" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 10.34558 838.10985 [1] 10.34558 838.10985 [1] 161.8902 989.6544 [1] 2.511429e-03 9.999990e+05 [1] "highestmid = 670.344849" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF09 APO_AO2 range = -270.98,-213.36" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 27751 records [1] 9 2775 27751 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -505.60 -513.90 -507.22 -506.03 -494.42 [1] 25824 [1] "Average Date / Time for slice RF09 = 2009-11-19 23:58:28.781346321106" [1] "sum(lsel) = 2273" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 10.34558 838.10985 [1] 10.34558 838.10985 [1] 161.8902 989.6544 [1] 2.511429e-03 9.999990e+05 [1] "highestmid = 670.344849" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF09 O2_AO2 range = -487.36,-410.61" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 27751 records [1] 9 2775 27751 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA 395.548 395.067 395.126 394.694 394.812 [1] 25840 [1] "Average Date / Time for slice RF09 = 2009-11-19 23:58:22.1024966239929" [1] "sum(lsel) = 2283" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 10.34558 838.10985 [1] 10.34558 838.10985 [1] 161.8902 989.6544 [1] 2.511429e-03 9.999990e+05 [1] "highestmid = 670.344849" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF09 CO2_AO2 range = 385.71,391.62" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 40 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"