[1] "2025-05-13 11:40:00 MDT" options [1,] "file" "091114a" [2,] "flight" "RF07" [3,] "project" "HIPPO2" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "091114a" [1] "Reading in flight and plotting intervals" Read 18 records [1] "Reading in /scr/raf/stephens/AO2DAT/091114a.mr" Read 13103 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.23 seconds" [1] "New JOGEST = 2.23 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/091114a.hr" Read 52416 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 13103 52416 [1] "Converting hrdata statout" [1] "Tue May 13 11:40:00 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.05 O2 = -389.2" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.27 O2 = -1009.8" [1] "position 3 cylinder OK30054 description: LT CO2 = 384.88 O2 = -839" [1] "position 4 cylinder OK170199 description: WT CO2 = 384.89 O2 = -784.4" [1] 337.0493 410.2703 384.8790 384.8856 NA [1] -389.1790 -1009.7587 -838.9954 -784.4070 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.967 co2off = 24.54 o2scla = -0.047 o2offa = -49.2" [1] "(dV/V)/(dXO2/XO2) = -4.442" [1] "(dV/V)/d(O2/N2) = -3.512" [1] "Reading in very high resolution timeseries" Read 262060 records [1] 262060 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:40:01 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:40:03 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.512" [1] "o2scaleavenew_drelVdrelP = -4.442" [1] "median(o2scalenew) = -3.514" [1] "Empirical dV/V vs dP/P relationship =-3.368, r^2 =0.002, damping =0.758" [1] "Tue May 13 11:40:03 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 20 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:40:40 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 13787593.48512 SECONDS" [1] "Tue May 13 11:40:40 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 5 medium-rate record(s) with accumulation errors" [1] "Removed 219 medium-rate record(s) > eco or < ico" [1] "from: 12880" [1] "to: 13098" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 4269 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -794.433 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -769.756 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -777.561 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 22.984 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 27 [1] 119 [1] 140 [1] 140 [1] 143 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 83 318.8638 1610.85067 1049452.1 -1 [2,] 84 318.8638 1061.82389 1047758.8 1 [3,] 85 318.8638 374.98349 1048153.1 -1 [4,] 161 318.8662 456.80047 1047444.5 -1 [5,] 162 318.8662 1526.76771 1046907.9 1 [6,] 163 318.8662 2494.75086 1049543.4 -1 [7,] 239 318.8685 2610.49448 1048731.5 -1 [8,] 240 318.8686 2312.06793 1045971.8 1 [9,] 241 318.8686 2005.72640 1048078.7 -1 [10,] 294 318.8702 2002.74116 1045384.6 1 [11,] 295 318.8703 2083.81201 1047450.0 -1 [12,] 296 318.8703 2066.99286 1045097.3 1 [13,] 297 318.8703 1960.80263 1047147.4 -1 [14,] 317 318.8709 1633.35575 1046597.6 -1 [15,] 318 318.8709 853.06774 1044919.1 1 [16,] 319 318.8710 72.90533 1044996.3 -1 [17,] 625 318.8802 465.30779 1043754.1 -1 [18,] 626 318.8802 1185.03183 1043254.1 1 [19,] 627 318.8803 2583.39825 1046127.6 -1 [20,] 628 318.8803 4366.74466 1043276.5 1 [21,] 629 318.8803 5134.02967 1048687.3 -1 [22,] 630 318.8803 4150.60457 1043281.5 1 [23,] 631 318.8804 2449.90045 1045784.5 -1 [24,] 632 318.8804 1455.15531 1043259.1 1 [25,] 633 318.8804 1081.28113 1044380.0 -1 [26,] 700 318.8825 302.48551 1043573.8 1 [27,] 701 318.8825 360.42981 1043825.4 -1 [28,] 702 318.8825 435.01239 1043350.9 1 [29,] 704 318.8826 367.24626 1043441.4 1 [30,] 705 318.8826 441.84756 1043817.2 -1 [31,] 706 318.8827 443.91564 1043165.7 1 [32,] 1072 318.8938 547.21191 1042274.8 1 [33,] 1073 318.8938 591.88884 1042733.3 -1 [34,] 1074 318.8938 656.09398 1042008.7 1 [35,] 1482 318.9063 612.28815 1038360.3 -1 [36,] 1486 318.9064 764.05784 1038492.2 -1 [37,] 1487 318.9064 1661.83030 1037637.1 1 [38,] 1488 318.9065 2566.24947 1040310.1 -1 [39,] 1562 318.9087 2693.43809 1039742.7 -1 [40,] 1563 318.9087 2637.41840 1036915.2 1 [41,] 1564 318.9088 2205.51318 1039123.1 -1 [42,] 1565 318.9088 1259.30745 1036894.2 1 [43,] 1566 318.9088 427.65952 1037324.5 -1 [44,] 1603 318.9100 225.15256 1036586.7 1 [45,] 1604 318.9100 274.37083 1036722.0 -1 [46,] 1605 318.9100 320.88784 1036292.6 1 [47,] 2672 318.9409 619.27312 1019520.0 -1 [48,] 2678 318.9411 313.00203 1018956.8 -1 [49,] 2754 318.9431 214.79071 1017638.9 -1 [50,] 2755 318.9431 1129.70562 1017412.6 1 [51,] 2756 318.9431 2169.06901 1019677.0 -1 [52,] 2758 318.9432 2564.91599 1020045.9 -1 [53,] 2832 318.9451 2634.45182 1019731.7 -1 [54,] 2833 318.9451 1887.85158 1017023.0 1 [55,] 2834 318.9451 1024.94460 1018042.8 -1 [56,] 4032 318.9756 612.22588 1013569.4 -1 [57,] 4036 318.9757 588.64153 1013539.7 -1 [58,] 4037 318.9757 1306.38858 1012920.2 1 [59,] 4038 318.9757 2104.76807 1015121.0 -1 [60,] 4040 318.9758 2537.63317 1015473.1 -1 [61,] 4114 318.9776 2636.89452 1015178.5 -1 [62,] 4115 318.9777 1720.34221 1012465.3 1 [63,] 4116 318.9777 762.17653 1013178.2 -1 [64,] 4118 318.9778 354.29186 1012791.6 -1 [65,] 4192 318.9796 230.98207 1012215.0 -1 [66,] 4193 318.9797 863.94510 1011975.6 1 [67,] 4194 318.9797 1545.14421 1013583.1 -1 [68,] 4196 318.9797 1846.84915 1013861.7 -1 [69,] 4270 318.9816 1943.98725 1013547.1 -1 [70,] 4271 318.9816 1465.67029 1011563.1 1 [71,] 4272 318.9817 934.53930 1012501.5 -1 [72,] 5396 319.0102 636.83952 1000651.7 -1 [73,] 5402 319.0104 254.64827 1000218.0 -1 [74,] 5476 319.0123 214.48465 999970.2 -1 [75,] 5477 319.0123 319.22129 999770.3 1 [76,] 5478 319.0123 751.35944 1000598.2 -1 [77,] 5479 319.0123 1669.73756 999769.9 1 [78,] 5480 319.0124 2453.93840 1002255.5 -1 [79,] 5556 319.0143 2429.07674 1002172.0 -1 [80,] 5557 319.0143 2113.48832 999755.1 1 [81,] 5558 319.0143 1819.84144 1001577.1 -1 [82,] 5634 319.0163 1371.25616 1001500.5 -1 [83,] 5635 319.0163 1011.16519 1000169.6 1 [84,] 5636 319.0163 715.70251 1000902.6 -1 [85,] 6175 319.0300 546.45608 1002770.0 1 [86,] 6176 319.0300 566.85936 1003247.0 -1 [87,] 6177 319.0301 609.53693 1002535.9 1 [88,] 7056 319.0548 653.26461 998740.8 -1 [89,] 7058 319.0549 648.64337 998745.6 -1 [90,] 7059 319.0549 1362.20931 998085.6 1 [91,] 7060 319.0550 2182.72078 1000325.2 -1 [92,] 7062 319.0550 2598.67553 1000678.4 -1 [93,] 7136 319.0573 2658.65420 1000878.1 -1 [94,] 7137 319.0573 1698.69602 998207.6 1 [95,] 7138 319.0574 660.26701 998822.0 -1 [96,] 7140 319.0574 302.49783 998527.3 -1 [97,] 8320 319.0895 614.71276 991653.9 -1 [98,] 8326 319.0896 247.86767 991165.9 -1 [99,] 8400 319.0916 224.75031 990170.8 -1 [100,] 8401 319.0916 288.66245 989920.3 1 [101,] 8402 319.0916 691.23696 990677.1 -1 [102,] 8403 319.0916 1578.02693 989927.3 1 [103,] 8404 319.0917 2440.21364 992359.1 -1 [104,] 8480 319.0936 2504.50784 991196.1 -1 [105,] 8481 319.0937 2240.78351 988721.1 1 [106,] 8482 319.0937 1996.02858 990694.6 -1 [107,] 8558 319.0956 1629.24081 988896.5 -1 [108,] 8559 319.0957 1158.72185 987310.2 1 [109,] 8560 319.0957 753.09155 988034.9 -1 [110,] 9674 319.1241 633.04593 988331.1 -1 [111,] 9678 319.1242 625.14845 988295.8 -1 [112,] 9679 319.1242 1334.19388 987666.1 1 [113,] 9680 319.1242 2129.81773 989820.4 -1 [114,] 9682 319.1243 2564.39495 990142.9 -1 [115,] 9756 319.1262 2643.36884 989523.3 -1 [116,] 9757 319.1262 1836.39371 986890.1 1 [117,] 9758 319.1262 919.60518 987715.3 -1 [118,] 9759 319.1263 470.77877 986856.3 1 [119,] 9760 319.1263 353.25697 987180.3 -1 [120,] 11134 319.1639 534.72549 982036.2 1 [121,] 11135 319.1639 477.69209 982366.9 -1 [122,] 11136 319.1640 589.05205 981783.1 1 [123,] 11596 319.1773 657.64336 976612.2 -1 [124,] 11602 319.1775 331.71445 976249.4 -1 [125,] 11678 319.1794 242.42828 976178.5 -1 [126,] 11679 319.1795 1276.16241 975940.8 1 [127,] 11680 319.1795 2302.28465 978242.1 -1 [128,] 11682 319.1795 2573.22145 978492.2 -1 [129,] 11756 319.1814 2650.95133 978542.6 -1 [130,] 11757 319.1815 2303.98035 975935.6 1 [131,] 11758 319.1815 1910.87892 977796.3 -1 [132,] 11834 319.1835 1746.97026 977402.6 -1 [133,] 11835 319.1835 1297.01549 975694.1 1 [134,] 11836 319.1835 835.09700 976517.2 -1 [135,] 12651 319.2050 644.23722 969177.8 1 [136,] 12652 319.2050 589.22653 969868.2 -1 [137,] 12653 319.2050 525.21296 969396.1 1 [138,] 12831 319.2096 559.57913 965408.8 1 [139,] 12832 319.2096 574.42006 965929.6 -1 [140,] 12833 319.2097 686.10550 965188.4 1 [141,] 12877 319.2110 -1174.93822 964070.8 1 [142,] 12878 319.2110 -1970.30668 964660.0 -1 [143,] 12879 319.2111 7554.88269 964052.2 1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 627 318.8803 4.437270e+02 [2,] 5784 319.0201 9.434113e+04 [3,] 11073 319.1624 9.455970e+11 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 548.308 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 219.688 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 222.789 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 22.984 PER MEG" [1] "MAX ORIG-PDPRCORR DIFFERENCE > 200" [1] 337.0493 410.2703 384.8790 384.8856 NA [1] -389.1790 -1009.7587 -838.9954 -784.4070 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.967 co2off = 24.54 o2scla = -0.047 o2offa = -49.2" [1] "(dV/V)/(dXO2/XO2) = -4.427" [1] "(dV/V)/d(O2/N2) = -3.5" [1] "Finding cal and sample periods" [1] "Median Cal: 2.86 minutes" [1] "Average Cal: 3.02 minutes" [1] "Shortest Cal: 2.8 minutes" [1] "Longest Cal: 3.4 minutes" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00841" [1] "HS CO2 vs. PACAB: m = -0.00814, r^2 = 0.71" [1] "LS CO2 vs. PACAB: m = -0.00869, r^2 = 0.83" [1] "HS+LS LIH2O vs. PACAB: m = -0.00084" [1] "HS LIH2O vs. PACAB: m = -0.000783, r^2 = 0.76" [1] "LS LIH2O vs. PACAB: m = -0.000898, r^2 = 0.91" [1] "HS+LS CO2 vs. LIH2O: m = 8.84" [1] "HS CO2 vs. LIH2O: m = 8.17, r^2 = 0.77" [1] "LS CO2 vs. LIH2O: m = 9.5, r^2 = 0.85" [1] "APCO2 vs. PACAB: m = -0.00276, r^2 = 0" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.19" [1] "HS O2 vs. PACAB: m = -0.15, r^2 = 0.3" [1] "LS O2 vs. PACAB: m = -0.229, r^2 = 0.42" [1] "HS+LS O2 vs. LIH2O: m = 250" [1] "HS O2 vs. LIH2O: m = 218, r^2 = 0.33" [1] "LS O2 vs. LIH2O: m = 282, r^2 = 0.46" [1] "HS+LS O2 vs. PAO2: m = -78" [1] "HS O2 vs. PAO2: m = -82.9, r^2 = 0.76" [1] "LS O2 vs. PAO2: m = -73.1, r^2 = 0.7" [1] "HS+LS O2 vs. TPBOX: m = 2.63" [1] "HS O2 vs. TPBOX: m = 1.92, r^2 = 0.05" [1] "LS O2 vs. TPBOX: m = 3.34, r^2 = 0.05" [1] "APO vs. PACAB: m = 0.049, r^2 = 0" [1] "APO vs. PAO2: m = -41.5, r^2 = 0.07" [1] "APO vs. TPBOX: m = 4.18, r^2 = 0.01" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 15.6, r^2 = 0.89" [1] "LS CO2 vs. LiCor Cell P: m = 17.8, r^2 = 0.88" [1] "HS CO2 vs. CO2 Vol P: m = 2.32, r^2 = 0.83" [1] "LS CO2 vs. CO2 Vol P: m = 2.59, r^2 = 0.74" [1] "HS CO2 vs. SLOPE: m = 5.44, r^2 = 0.33" [1] "LS CO2 vs. SLOPE: m = 0.356, r^2 = 0" [1] "HS O2 vs. O2 Vol P: m = -77, r^2 = 0.75" [1] "LS O2 vs. O2 Vol P: m = -87.6, r^2 = 0.64" [1] "HS O2 vs. O2 Cell T: m = 16, r^2 = 0.5" [1] "LS O2 vs. O2 Cell T: m = 28.6, r^2 = 0.72" [1] "HS O2 vs. CO2 Vol P: m = 1.6, r^2 = 0" [1] "LS O2 vs. CO2 Vol P: m = 17.8, r^2 = 0.08" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 20.6, r^2 = 0.05" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -1.28, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = 1.6, r^2 = 0" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = 17.8, r^2 = 0.08" [1] "HS O2 vs. LIH2O: m = 155, r^2 = 0.29" [1] "LS O2 vs. LIH2O: m = 337, r^2 = 0.61" [1] "HS O2 vs. SLOPE: m = 2.12, r^2 = 0.32" [1] "LS O2 vs. SLOPE: m = -1.57, r^2 = 0.12" [1] "HS CO2 vs. Time: m = 24.177, r^2 = 0.89" [1] "LS CO2 vs. Time: m = 25.433, r^2 = 0.9" [1] "HS CO2 vs. Cylinder T: m = -5.204, r^2 = 0.92" [1] "LS CO2 vs. Cylinder T: m = -5.705, r^2 = 0.886" [1] "HS CO2 vs. Regulator T: m = -1.168, r^2 = 0.15" [1] "LS CO2 vs. Regulator T: m = -1.394, r^2 = 0.161" [1] "HS CO2 vs. Ref. Volumes T: m = 2.051, r^2 = 0.93" [1] "LS CO2 vs. Ref. Volumes T: m = 2.295, r^2 = 0.925" [1] "HS CO2 vs. Manifold T: m = 1.132, r^2 = 0.58" [1] "LS CO2 vs. Manifold T: m = 1.266, r^2 = 0.626" [1] "HS CO2 vs. Pump Box T: m = 0.475, r^2 = 0.32" [1] "LS CO2 vs. Pump Box T: m = 0.545, r^2 = 0.3" [1] "HS O2 vs. Cylinder T: m = -22.492, r^2 = 0.07" [1] "LS O2 vs. Cylinder T: m = -64.849, r^2 = 0.246" [1] "HS O2 vs. Regulator T: m = 6.073, r^2 = 0.02" [1] "LS O2 vs. Regulator T: m = -0.551, r^2 = 0" [1] "HS O2 vs. Ref. Volumes T: m = 14.808, r^2 = 0.2" [1] "LS O2 vs. Ref. Volumes T: m = 34.687, r^2 = 0.455" [1] "HS O2 vs. Manifold T: m = 17.056, r^2 = 0.55" [1] "LS O2 vs. Manifold T: m = 28.663, r^2 = 0.69" [1] "HS O2 vs. Pump Box T: m = 3.939, r^2 = 0.09" [1] "LS O2 vs. Pump Box T: m = 5.737, r^2 = 0.072" [1] "HS CO2 vs. WT P: m = -0.015, r^2 = 0.61" [1] "LS CO2 vs. WT P: m = -0.016, r^2 = 0.627" [1] "HS CO2 vs. SP P: m = -0.00833, r^2 = 0.81" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.269, r^2 = 0.69" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.281, r^2 = 0.69" [1] "LS CO2 vs. SP P: m = -0.00955, r^2 = 0.9" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.22, r^2 = 0.66" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.236, r^2 = 0.66" [1] "HS CO2 vs. WT FL: m = 0.933, r^2 = 0.5" [1] "LS CO2 vs. WT FL: m = 1.112, r^2 = 0.604" [1] "HS CO2 vs. SP FL: m = 0.409, r^2 = 0.74" [1] "LS CO2 vs. SP FL: m = 0.419, r^2 = 0.756" [1] "HS O2 vs. SLPDIFF: m = 0.714, r^2 = 0.4" [1] "LS O2 vs. SLPDIFF: m = 0.288, r^2 = 0.002" [1] "HS O2 vs. WT P: m = -0.177, r^2 = 0.35" [1] "LS O2 vs. WT P: m = -0.317, r^2 = 0.558" [1] "HS O2 vs. SP P: m = -0.185, r^2 = 0.34" [1] "LS O2 vs. SP P: m = -0.328, r^2 = 0.539" [1] "HS O2 vs. WT FL: m = 13.072, r^2 = 0.41" [1] "LS O2 vs. WT FL: m = 24.49, r^2 = 0.63" [1] "HS O2 vs. SP FL: m = 4.521, r^2 = 0.37" [1] "LS O2 vs. SP FL: m = 8.468, r^2 = 0.665" [1] "Plotting calibration shapes" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.65" [1] "Median all HS CO2 SD = 0.64" [1] "Median all LS CO2 SD = 0.68" [1] "Median all LT CO2 SD = 0.64" [1] "Median all WT CO2 SD = 0.68" [1] "Median all HS or LS CO2 SD = 0.65" [1] "Median all cal O2 SD = 2.11" [1] "Median all HS O2 SD = 2.09" [1] "Median all LS O2 SD = 2.5" [1] "Median all LT O2 SD = 2.13" [1] "Median all WT O2 SD = 1.48" [1] "Median all HS or LS O2 SD = 2.32" [1] "Median all cal CO2 Slope = 0.1" [1] "Median all HS CO2 Slope = 0.09" [1] "Median all LS CO2 Slope = 0.08" [1] "Median all LT CO2 Slope = 0.15" [1] "Median all WT CO2 Slope = 0.11" [1] "Median all HS or LS CO2 Slope = 0.08" [1] "Median all cal O2 Slope = 0.37" [1] "Median all HS O2 Slope = 1.04" [1] "Median all LS O2 Slope = -0.37" [1] "Median all LT O2 Slope = 0.37" [1] "Median all WT O2 Slope = 0.09" [1] "Median all HS or LS O2 Slope = 0.68" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 6.07 per meg" [1] "Initial O2 Calibration Offset = -10.59 per meg" [1] "SD of O2 Calibration (post-takeoff) = 5.6 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -11.08 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -11.08 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO1-2 inlet volumes" [1] "before any lag: 74412.17 104636.62" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 38.4 at 107.5 sccm" [1] "Median O2 delay + tlagff = 39.3 at 107.5 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 37.3 at 107.5 sccm" [1] "Median O2 delay from 3-way + tlagff = 38.2 at 107.5 sccm" [1] "after calc and ff lag: 74371.36 104596.19" [1] "2025-05-13 11:41:28 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 56 1-Hz values because of data gaps at:" [1] 318.9034 318.9034 319.2107 319.2107 319.2107 319.2107 319.2107 319.2107 [9] 319.2107 319.2108 319.2108 319.2108 319.2108 319.2108 319.2108 319.2108 [17] 319.2108 319.2108 319.2109 319.2109 319.2109 319.2109 319.2109 319.2109 [25] 319.2109 319.2109 319.2109 319.2110 319.2110 319.2110 319.2110 319.2110 [33] 319.2110 319.2110 319.2110 319.2111 319.2111 319.2111 319.2111 319.2111 [41] 319.2111 319.2111 319.2111 319.2111 319.2112 319.2112 319.2112 319.2112 [49] 319.2112 319.2112 319.2112 319.2112 319.2113 319.2113 319.2113 319.2113 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] 31.0559269 25.6580254 23.3963755 18.7430667 18.7430667 21.7052783 [7] 23.8572643 25.1179562 26.4576750 29.3045187 29.5395509 33.8661252 [13] 37.9321088 43.5948933 45.0670175 45.5711202 32.8859815 26.2099794 [19] 28.7544644 28.8373769 24.7396055 22.9361174 20.4922436 20.4922436 [25] 24.2872263 28.1642190 20.1135649 22.0971462 25.5839827 26.3473071 [31] 18.5110529 13.1287284 11.9851782 26.3107982 26.4153692 28.6246693 [37] 28.6246693 26.0756481 26.0756481 29.0722363 29.4632637 24.9686907 [43] 23.8116348 22.4749346 22.1838426 29.6634353 26.8502547 25.7758116 [49] 26.1497250 31.1645491 32.2173521 32.8317781 29.3279947 25.1907524 [55] 26.2076137 26.8197489 29.9665849 26.8197489 29.9665849 29.6614572 [61] 24.6486246 23.6572440 -1.5835331 -1.0381067 -0.4328458 0.1739361 [67] 31.3985852 30.2448243 29.1335438 27.7256730 12.4201593 13.5248576 [73] 15.7792127 16.7430564 17.6161208 18.3315063 19.3493635 8.8971891 [79] 8.8971891 8.7649717 6.0295590 13.6484422 13.5809602 11.1643040 [85] 10.3042859 12.9338226 12.9588336 12.9588336 12.1871995 10.9423315 [91] 12.3640154 12.7328489 17.2931510 18.1403603 20.3264077 20.3264077 [97] 20.2462416 20.3925618 20.9593618 21.0336179 28.5228666 26.8928700 [103] 22.7137637 17.9538673 14.1645958 16.9889015 18.2683543 4.6836322 [109] 1.1114261 -1.4166338 -1.4166338 12.0338630 13.4791153 15.1396855 [115] 15.1396855 11.8984048 11.0822924 9.6092150 9.6092150 6.3200798 [121] 9.0537903 10.8125252 17.1804298 20.9559138 23.0838651 24.0107908 [127] 19.8267759 18.0099714 15.2723706 14.7259530 17.9836743 17.9836743 [133] 18.0107827 18.0117196 14.8823420 14.8978923 15.0381847 15.0507080 [139] 8.9197518 8.9197518 9.1718007 9.2179383 15.8021550 15.3491809 [145] 13.7498268 5.8263213 4.2072723 6.4549332 7.1533786 12.8851386 [151] 12.4326008 11.4909933 11.4909933 6.9043619 6.9043619 10.4844487 [157] 10.4844487 15.8161993 15.8877863 16.6267031 16.6267031 15.0757766 [163] 14.8291308 14.5677188 14.4062229 13.0348229 11.4208853 9.5582955 [169] 7.3631234 7.6387093 11.3152979 11.8121573 9.7888769 9.7888769 [175] 8.0741882 8.0741882 12.3954055 12.4238233 13.9076790 14.3376466 [181] 14.0223730 15.0106451 15.6648545 16.2732399 16.9778640 22.2788164 [187] 23.5966752 23.8830152 23.8935840 22.6458311 21.9332025 19.8319465 [193] 19.8319465 16.2311435 15.4742783 22.7527599 22.7527599 33.8661686 [199] 27.6625107 17.2550714 12.0540084 7.9171253 13.9574313 15.7172312 [205] 15.9928759 15.9928759 17.5336798 17.7039671 19.0580474 19.0580474 [211] 17.6377239 15.5104406 10.6351236 10.6351236 11.8845024 14.0703436 [217] 15.8090524 16.4141584 18.7767979 22.3093382 23.4240787 27.2290033 [223] 27.3399640 19.1097833 18.6720136 17.8452627 17.8452627 21.1827887 [229] 22.6656225 20.7664599 20.5554133 18.0136659 17.7037768 13.0441822 [235] 13.3113771 15.1491169 18.3065067 18.8863582 18.4603335 18.4603335 [241] 16.8451912 15.8568130 12.1950203 12.1950203 18.9101094 19.1018164 [247] 21.0199952 21.0909998 15.5984260 15.5984260 19.0121042 19.5823392 [253] 20.9226470 19.3973173 16.2100502 15.3840869 17.4016274 19.4933555 [259] 20.5607220 18.9259506 18.9259506 21.2466310 22.1599142 24.2102658 [265] 24.4416310 25.8797310 25.8797310 14.8442448 14.1511057 6.4609244 [271] 5.7547716 5.8942686 8.7248842 [1] 191.9091 194.1376 195.7385 197.3361 199.4584 201.8724 203.7689 205.7690 [9] 208.6283 210.2350 212.3588 214.2283 216.3081 217.9773 220.0526 222.1062 [17] 224.0745 226.0145 228.0564 229.9210 231.9675 233.6802 235.6642 237.4297 [25] 239.2473 241.2856 243.4890 245.5108 247.6948 248.9362 251.0816 253.3321 [33] 255.8486 257.6702 259.4839 261.6957 263.2457 265.0994 267.2278 268.8196 [41] 270.0409 272.5216 274.5717 276.1558 277.9821 279.8581 281.8813 283.8162 [49] 285.4025 286.4173 288.7585 290.8587 292.7546 294.3274 296.2049 298.3250 [57] 299.9801 298.3025 299.7685 301.1725 303.8415 305.1800 306.5915 308.8135 [65] 310.1091 311.7602 314.2144 315.9031 317.6780 319.7848 320.9235 322.8173 [73] 324.3313 326.5319 328.3815 329.5933 330.3877 330.8429 333.2910 336.0053 [81] 340.0179 341.9156 342.6087 344.0717 346.1811 348.4458 350.1887 351.4268 [89] 353.0812 354.0608 356.0310 357.9860 359.6895 361.7404 363.6204 365.0709 [97] 366.6375 368.6080 369.9362 372.5163 373.8834 375.3433 377.4579 379.5982 [105] 380.9657 382.4744 383.9488 385.8510 387.4944 389.1804 390.8042 392.2672 [113] 393.9947 395.7447 397.2603 398.8104 400.1583 401.5828 403.0481 404.6588 [121] 406.4112 407.9545 409.5849 410.9786 413.0120 414.1730 415.8848 417.5687 [129] 419.0428 420.3626 421.7541 423.2681 425.0360 426.4618 428.1699 429.6616 [137] 431.0675 432.6552 434.0982 435.5252 436.9671 438.5546 440.0990 441.5438 [145] 442.8657 444.6857 446.1979 447.9765 449.3373 451.2074 452.6558 454.3290 [153] 455.5535 457.0172 458.1613 460.0078 461.2982 463.1121 464.2336 465.9806 [161] 467.2527 468.5160 469.7909 471.3885 472.7001 474.1552 475.3074 476.9009 [169] 478.6396 479.9958 481.2352 482.5898 483.9231 485.7270 487.3016 488.4584 [177] 490.0424 491.3303 492.8545 494.0108 495.5155 497.0649 498.4688 499.9136 [185] 501.3384 502.6687 504.0166 505.3957 506.6948 507.9400 509.1011 510.6880 [193] 512.1796 513.6036 514.8282 516.2636 517.5458 519.0378 520.5616 521.8290 [201] 523.1953 524.6752 525.9158 527.3499 528.4318 529.9044 531.3172 532.6701 [209] 534.2299 535.1991 536.8504 538.1900 539.5879 540.7824 542.2982 543.5549 [217] 544.6914 545.8878 547.2824 548.4603 549.7981 551.0280 552.2079 553.5261 [225] 554.5226 555.8820 557.0968 558.2668 559.4588 560.8447 562.2722 563.3099 [233] 564.6659 565.8088 567.0572 568.6121 570.1918 571.1854 572.7574 573.9062 [241] 575.0988 576.1226 577.2632 578.6236 579.7359 581.1095 582.2083 583.2050 [249] 584.5999 585.7352 586.8499 587.9708 589.0580 590.3214 591.4404 592.4662 [257] 593.7636 595.0349 596.1385 597.4094 598.7955 599.7647 601.0101 602.3470 [265] 603.4361 604.7441 605.7800 606.7947 608.1188 609.2018 610.2922 611.5026 [273] 612.5753 [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 17 O2 values from manual exclude period 319.210568 to 319.211497" [1] "Not reporting 17 APO values from manual exclude period 319.210568 to 319.211497" [1] "Not reporting 29 O2 values from manual exclude period 318.88631 to 318.887149" [1] "Not reporting 29 APO values from manual exclude period 318.88631 to 318.887149" [1] "Not reporting 81 smoothed O2 values from manual exclude period 319.210090432133 to 319.211029010059" [1] "Not reporting 81 smoothed APO values from manual exclude period 319.210090432133 to 319.211029010059" [1] "Not reporting 74 smoothed O2 values from manual exclude period 318.88582757876 to 318.88668007791" [1] "Not reporting 74 smoothed APO values from manual exclude period 318.88582757876 to 318.88668007791" [1] "Not reporting 81 smoothed O2 values from manual exclude period 319.210090432133 to 319.211029010059" [1] "Not reporting 81 smoothed APO values from manual exclude period 319.210090432133 to 319.211029010059" [1] "Not reporting 74 smoothed O2 values from manual exclude period 318.88582757876 to 318.88668007791" [1] "Not reporting 74 smoothed APO values from manual exclude period 318.88582757876 to 318.88668007791" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 28411 records [1] 7 2840 28411 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -267.19 -276.39 -270.38 -270.28 -259.94 [1] 25811 [1] "Average Date / Time for slice RF07 = 2009-11-15 01:23:29.1046769618988" [1] "sum(lsel) = 2245" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 2.993591 821.476730 [1] 2.993591 821.476730 [1] 178.5233 997.0064 [1] 8.374286e-04 9.999990e+05 [1] "highestmid = 670.279236" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF07 APO_AO2 range = -273.46,-237.91" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 28411 records [1] 7 2840 28411 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -505.60 -513.90 -507.22 -506.03 -494.42 [1] 25818 [1] "Average Date / Time for slice RF07 = 2009-11-15 01:23:29.1046769618988" [1] "sum(lsel) = 2245" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 2.993591 821.476730 [1] 2.993591 821.476730 [1] 178.5233 997.0064 [1] 8.374286e-04 9.999990e+05 [1] "highestmid = 670.279236" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF07 O2_AO2 range = -470.28,-427.52" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 28411 records [1] 7 2840 28411 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA 395.548 395.067 395.126 394.694 394.812 [1] 25844 [1] "Average Date / Time for slice RF07 = 2009-11-15 01:24:26.9309122562408" [1] "sum(lsel) = 2258" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 0.952759 821.476730 [1] 0.952759 821.476730 [1] 178.5233 999.0472 [1] 8.374286e-04 9.999990e+05 [1] "highestmid = 670.279236" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF07 CO2_AO2 range = 385,388.57" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 16 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"