[1] "2025-05-13 11:25:51 MDT" options [1,] "file" "091031a" [2,] "flight" "RF01" [3,] "project" "HIPPO2" [4,] "png" "TRUE" [5,] "valveskip" "110" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "091031a" [1] "Reading in flight and plotting intervals" Read 19 records [1] "Reading in /scr/raf/stephens/AO2DAT/091031a.mr" Read 10320 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.25 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.32 seconds" [1] "New JOGEST = 2.32 seconds" [1] "New VALVE SKIP = 47 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/091031a.hr" Read 41284 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 10320 41281 [1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH" [1] 10320 41281 [1] "Converting hrdata statout" [1] "Tue May 13 11:25:52 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30069 description: HS CO2 = 337.04 O2 = -380.5" [1] "position 2 cylinder OK30070 description: LS CO2 = 410.27 O2 = -1001.6" [1] "position 3 cylinder OK30053 description: LT CO2 = 405.44 O2 = -521.5" [1] "position 4 cylinder OK30054 description: WT CO2 = 384.85 O2 = -829.3" [1] 337.0426 410.2660 405.4437 384.8524 NA [1] -380.4715 -1001.6020 -521.4711 -829.3469 NA [1] "Nominal linear calibrations:" [1] "co2scl = 1.007 co2off = 50.88 o2scla = -0.048 o2offa = -59.3" [1] "(dV/V)/(dXO2/XO2) = -4.364" [1] "(dV/V)/d(O2/N2) = -3.45" [1] "Reading in very high resolution timeseries" Read 206380 records [1] 206380 [1] "VHR FILE LENGTH NOT 5 * NSWITCH * MRDATA FILE LENGTH" [1] 10320 41281 206380 [1] "REMOVING MID MR JOG(S) AT:" [1] 10300 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:25:53 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:25:54 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.45" [1] "o2scaleavenew_drelVdrelP = -4.364" [1] "median(o2scalenew) = -3.469" [1] "Empirical dV/V vs dP/P relationship =-4.035, r^2 =0.001, damping =0.925" [1] "Tue May 13 11:25:55 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:26:20 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 13171761.03456 SECONDS" [1] "Tue May 13 11:26:20 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 4 medium-rate record(s) with accumulation errors" [1] "Removed 976 medium-rate record(s) > eco or < ico" [1] "from: 1" [1] "to: 880" [1] "from: 10220" [1] "to: 10315" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 1949 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 52486.609 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 52463.244 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 52462.478 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -17.373 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 33 [1] 138 [1] 167 [1] 167 [1] 175 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 26 304.6821 7.110944e+01 1012869.4 -1 [2,] 27 304.6821 4.141695e+02 1012711.2 1 [3,] 28 304.6821 9.626910e+02 1013781.2 -1 [4,] 29 304.6822 1.674343e+03 1012622.4 1 [5,] 30 304.6822 2.365841e+03 1015002.6 -1 [6,] 51 304.6829 2.411680e+03 1011779.8 1 [7,] 52 304.6829 2.403142e+03 1014105.9 -1 [8,] 53 304.6830 2.440337e+03 1011569.2 1 [9,] 79 304.6839 2.394494e+03 1010628.2 1 [10,] 80 304.6839 2.416963e+03 1012967.0 -1 [11,] 81 304.6839 2.403177e+03 1010404.0 1 [12,] 82 304.6840 2.326867e+03 1012760.2 -1 [13,] 92 304.6843 2.401701e+03 1012445.5 -1 [14,] 93 304.6843 1.418514e+03 1009988.2 1 [15,] 94 304.6844 4.720360e+02 1010408.9 -1 [16,] 500 304.6967 3.186623e+02 996795.2 -1 [17,] 502 304.6968 3.219231e+02 996732.3 -1 [18,] 503 304.6968 1.371855e+03 996327.2 1 [19,] 504 304.6968 2.240394e+03 998551.2 -1 [20,] 566 304.6989 2.413352e+03 996381.9 -1 [21,] 567 304.6990 2.060073e+03 993937.7 1 [22,] 568 304.6990 1.462997e+03 995260.5 -1 [23,] 569 304.6990 7.526182e+02 993889.8 1 [24,] 570 304.6991 1.602321e+02 994005.1 -1 [25,] 632 304.7012 1.198287e+01 991877.8 -1 [26,] 633 304.7012 3.311022e+02 991841.4 1 [27,] 634 304.7012 6.515911e+02 992486.5 -1 [28,] 698 304.7034 1.208480e+03 991575.8 -1 [29,] 700 304.7035 1.685074e+03 991954.2 -1 [30,] 762 304.7055 1.671914e+03 990739.6 -1 [31,] 763 304.7056 1.184502e+03 989043.1 1 [32,] 764 304.7056 6.073058e+02 989632.3 -1 [33,] 824 304.7076 2.841414e+02 988190.9 -1 [34,] 892 304.7099 -3.364357e-01 986519.8 -1 [35,] 893 304.7099 9.927374e+02 986483.2 1 [36,] 894 304.7099 2.068631e+03 988559.7 -1 [37,] 896 304.7100 2.350084e+03 988768.6 -1 [38,] 956 304.7120 2.395373e+03 987473.8 -1 [39,] 957 304.7120 2.288110e+03 985078.2 1 [40,] 958 304.7121 1.977939e+03 986945.5 -1 [41,] 959 304.7121 1.291240e+03 984993.4 1 [42,] 960 304.7121 8.316742e+02 985811.7 -1 [43,] 1022 304.7142 8.166237e+02 984263.3 -1 [44,] 1023 304.7143 1.203008e+03 983433.1 1 [45,] 1024 304.7143 1.625592e+03 985028.5 -1 [46,] 1086 304.7164 1.665629e+03 983431.6 -1 [47,] 1087 304.7164 1.532788e+03 981754.4 1 [48,] 1088 304.7164 1.239828e+03 982916.5 -1 [49,] 1089 304.7165 7.726065e+02 981706.9 1 [50,] 1090 304.7165 3.599321e+02 982052.3 -1 [51,] 1716 304.7353 2.705719e+02 972489.3 -1 [52,] 1720 304.7354 2.813354e+02 972500.6 -1 [53,] 1721 304.7355 1.114450e+03 972213.7 1 [54,] 1722 304.7355 1.947499e+03 974164.9 -1 [55,] 1724 304.7355 2.319539e+03 974474.9 -1 [56,] 1784 304.7371 2.364991e+03 974620.3 -1 [57,] 1785 304.7371 2.248799e+03 972302.4 1 [58,] 1786 304.7372 1.740153e+03 973926.5 -1 [59,] 1787 304.7372 9.147805e+02 972319.5 1 [60,] 1788 304.7372 2.022800e+02 972498.7 -1 [61,] 2712 304.7624 2.884710e+02 977785.6 -1 [62,] 2718 304.7626 4.747611e+00 977401.9 -1 [63,] 2780 304.7646 -6.240604e+01 976657.2 -1 [64,] 2781 304.7646 7.625199e+02 976698.2 1 [65,] 2782 304.7646 1.598080e+03 978343.1 -1 [66,] 2783 304.7647 2.100277e+03 976703.2 1 [67,] 2784 304.7647 2.267462e+03 978924.9 -1 [68,] 2846 304.7664 2.350648e+03 978738.6 -1 [69,] 2847 304.7664 1.702579e+03 976439.1 1 [70,] 2848 304.7664 9.582788e+02 977348.8 -1 [71,] 2849 304.7664 5.003016e+02 976488.8 1 [72,] 2850 304.7665 3.397239e+02 976831.6 -1 [73,] 3321 304.7788 2.911737e+02 979964.7 1 [74,] 3322 304.7788 2.156018e+02 980339.0 -1 [75,] 3323 304.7788 2.360810e+02 980329.1 1 [76,] 4036 304.7998 2.703743e+02 989805.6 -1 [77,] 4038 304.7999 2.760658e+02 989874.2 -1 [78,] 4039 304.7999 4.536888e+02 989600.8 1 [79,] 4040 304.7999 9.025448e+02 990588.3 -1 [80,] 4041 304.8000 1.654019e+03 989627.7 1 [81,] 4042 304.8000 2.254746e+03 991901.5 -1 [82,] 4118 304.8024 2.247705e+03 993788.0 -1 [83,] 4119 304.8024 1.251796e+03 991597.3 1 [84,] 4120 304.8025 1.634787e+02 991777.1 -1 [85,] 4196 304.8046 -4.501801e+01 993057.7 -1 [86,] 4197 304.8046 1.915029e+02 993134.3 1 [87,] 4198 304.8046 5.085953e+02 993693.9 -1 [88,] 4970 304.8275 2.625840e+02 1000243.1 -1 [89,] 4976 304.8277 3.107907e+01 1000004.4 -1 [90,] 5052 304.8296 -4.660119e+01 999970.7 -1 [91,] 5053 304.8296 6.708658e+02 1000022.5 1 [92,] 5054 304.8297 1.701595e+03 1001807.7 -1 [93,] 5056 304.8297 2.230198e+03 1002294.4 -1 [94,] 5132 304.8317 1.935030e+03 1001886.7 -1 [95,] 5134 304.8317 1.678201e+03 1001654.8 -1 [96,] 5208 304.8337 1.267758e+03 1001133.5 -1 [97,] 5209 304.8338 7.496028e+02 999891.0 1 [98,] 5210 304.8338 3.560044e+02 1000267.9 -1 [99,] 6042 304.8552 3.693509e+02 1008315.4 -1 [100,] 6044 304.8553 3.895993e+02 1008355.3 -1 [101,] 6045 304.8553 4.888467e+02 1007960.4 1 [102,] 6046 304.8553 8.329170e+02 1008895.2 -1 [103,] 6047 304.8554 1.542985e+03 1007981.8 1 [104,] 6048 304.8554 2.196512e+03 1010214.4 -1 [105,] 6124 304.8573 2.251734e+03 1010642.1 -1 [106,] 6125 304.8573 1.287125e+03 1008372.1 1 [107,] 6126 304.8574 2.921103e+02 1008635.4 -1 [108,] 6128 304.8574 7.588011e+01 1008428.5 -1 [109,] 6414 304.8648 4.124040e+02 1005968.5 -1 [110,] 6420 304.8650 9.409878e+01 1005470.3 -1 [111,] 6496 304.8669 -9.093656e+01 1004156.4 -1 [112,] 6497 304.8670 4.562886e+02 1004234.3 1 [113,] 6498 304.8670 1.215135e+03 1005533.9 -1 [114,] 6499 304.8670 1.811200e+03 1004213.0 1 [115,] 6500 304.8670 2.172502e+03 1006390.1 -1 [116,] 6520 304.8676 2.218202e+03 1005958.5 -1 [117,] 6524 304.8678 2.211174e+03 1005872.9 -1 [118,] 6527 304.8679 2.379033e+03 1003619.5 1 [119,] 6528 304.8679 2.339750e+03 1005883.9 -1 [120,] 6529 304.8679 2.133011e+03 1003402.1 1 [121,] 6530 304.8680 1.644327e+03 1005049.2 -1 [122,] 6531 304.8680 9.281990e+02 1003516.8 1 [123,] 6532 304.8680 4.242852e+02 1003934.8 -1 [124,] 6721 304.8734 3.899942e+02 1002487.4 1 [125,] 6722 304.8734 3.835944e+02 1002957.3 -1 [126,] 6723 304.8734 3.565129e+02 1002703.9 1 [127,] 7895 304.9043 3.374994e+02 1012878.6 -1 [128,] 7901 304.9045 -1.357688e+01 1012478.0 -1 [129,] 7975 304.9068 -2.385328e+01 1012918.4 -1 [130,] 7976 304.9069 9.981176e+01 1012954.3 1 [131,] 7977 304.9069 6.219085e+02 1013685.1 -1 [132,] 7978 304.9069 1.519062e+03 1012974.2 1 [133,] 7979 304.9070 2.255662e+03 1015303.6 -1 [134,] 8055 304.9093 2.194319e+03 1015899.5 -1 [135,] 8056 304.9094 1.550360e+03 1013696.9 1 [136,] 8057 304.9094 8.659604e+02 1014598.6 -1 [137,] 8714 304.9273 3.665559e+02 1019870.5 1 [138,] 8715 304.9273 3.692782e+02 1020151.4 -1 [139,] 8716 304.9273 3.654180e+02 1019657.8 1 [140,] 9080 304.9366 4.428499e+02 1015178.2 1 [141,] 9081 304.9367 5.457220e+02 1015667.5 -1 [142,] 9082 304.9367 4.578907e+02 1014968.3 1 [143,] 9164 304.9390 3.126625e+02 1013624.0 1 [144,] 9165 304.9390 3.906284e+02 1013891.9 -1 [145,] 9166 304.9391 4.836128e+02 1013358.4 1 [146,] 9174 304.9393 4.909215e+02 1013203.9 1 [147,] 9175 304.9393 4.802616e+02 1013662.1 -1 [148,] 9176 304.9393 5.451540e+02 1012958.0 1 [149,] 9185 304.9395 4.257601e+02 1013430.0 -1 [150,] 9187 304.9396 3.355241e+02 1013404.4 -1 [151,] 9188 304.9396 6.037042e+02 1013002.1 1 [152,] 9189 304.9396 1.061562e+03 1014104.9 -1 [153,] 9190 304.9397 1.695746e+03 1012840.9 1 [154,] 9191 304.9397 2.233615e+03 1015026.8 -1 [155,] 9207 304.9401 2.326014e+03 1014896.7 -1 [156,] 9217 304.9404 2.271563e+03 1014592.8 -1 [157,] 9241 304.9410 2.194105e+03 1014145.9 -1 [158,] 9248 304.9411 2.247036e+03 1011802.6 1 [159,] 9249 304.9412 2.379423e+03 1014119.8 -1 [160,] 9250 304.9412 2.520831e+03 1011560.1 1 [161,] 9267 304.9416 2.335910e+03 1013875.8 -1 [162,] 9268 304.9417 1.386969e+03 1011563.3 1 [163,] 9269 304.9417 2.162089e+02 1011821.6 -1 [164,] 9271 304.9417 9.926891e+01 1011573.1 -1 [165,] 9274 304.9418 -2.607768e+01 1011451.4 1 [166,] 9275 304.9418 1.690760e+01 1011346.1 -1 [167,] 9276 304.9419 7.326411e+01 1011234.0 1 [168,] 9332 304.9435 -1.957712e+03 1010014.1 1 [169,] 9333 304.9435 -2.544803e+03 1009959.5 -1 [170,] 9334 304.9435 6.906331e+03 1009933.7 1 [171,] 9335 304.9436 9.327444e+03 1009914.8 -1 [172,] 9336 304.9436 -2.552330e+04 1009967.9 1 [173,] 9337 304.9436 -3.814184e+04 1009874.5 -1 [174,] 9338 304.9437 1.005203e+05 1009892.2 1 [175,] 9339 304.9437 2.039423e+05 1009853.8 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 2004 304.7430 83559.42 [2,] 4975 304.8276 813097500.00 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 213.334 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 201.563 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 188.019 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) -17.373 PER MEG" [1] 337.0426 410.2660 405.4437 384.8524 NA [1] -380.4715 -1001.6020 -521.4711 -829.3469 NA [1] "Nominal linear calibrations:" [1] "co2scl = 1.006 co2off = 51.47 o2scla = -0.048 o2offa = -60.4" [1] "(dV/V)/(dXO2/XO2) = -4.386" [1] "(dV/V)/d(O2/N2) = -3.467" [1] "Finding cal and sample periods" [1] "Median Cal: 3.07 minutes" [1] "Average Cal: 2.89 minutes" [1] "Shortest Cal: 1.06 minutes" [1] "Longest Cal: 3.52 minutes" [1] "Removed 2 calibration period(s) with less than 30 seconds of data" [1] "at: 1" [1] "at: 24" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = 0.00053" [1] "HS CO2 vs. PACAB: m = 0.000478, r^2 = 0.04" [1] "LS CO2 vs. PACAB: m = 0.000582, r^2 = 0.01" [1] "HS+LS LIH2O vs. PACAB: m = 0.000246" [1] "HS LIH2O vs. PACAB: m = 0.000374, r^2 = 0.55" [1] "LS LIH2O vs. PACAB: m = 0.000119, r^2 = 0.22" [1] "HS+LS CO2 vs. LIH2O: m = -2.73" [1] "HS CO2 vs. LIH2O: m = 0.622, r^2 = 0.02" [1] "LS CO2 vs. LIH2O: m = -6.09, r^2 = 0.19" [1] "APCO2 vs. PACAB: m = 0.00956, r^2 = 0.06" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -0.234" [1] "HS O2 vs. PACAB: m = -0.121, r^2 = 0.4" [1] "LS O2 vs. PACAB: m = -0.347, r^2 = 0.7" [1] "HS+LS O2 vs. LIH2O: m = -307" [1] "HS O2 vs. LIH2O: m = -409, r^2 = 0.9" [1] "LS O2 vs. LIH2O: m = -206, r^2 = 0.15" [1] "HS+LS O2 vs. PAO2: m = -47" [1] "HS O2 vs. PAO2: m = -49.7, r^2 = 0.77" [1] "LS O2 vs. PAO2: m = -44.2, r^2 = 0.22" [1] "HS+LS O2 vs. TPBOX: m = -2.26" [1] "HS O2 vs. TPBOX: m = -7.71, r^2 = 0.67" [1] "LS O2 vs. TPBOX: m = 3.19, r^2 = 0.01" [1] "APO vs. PACAB: m = -0.175, r^2 = 0.06" [1] "APO vs. PAO2: m = -19.9, r^2 = 0.14" [1] "APO vs. TPBOX: m = -6.05, r^2 = 0.11" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = 0.635, r^2 = 0.04" [1] "LS CO2 vs. LiCor Cell P: m = 4.93, r^2 = 0.43" [1] "HS CO2 vs. CO2 Vol P: m = 0.13, r^2 = 0.12" [1] "LS CO2 vs. CO2 Vol P: m = 0.636, r^2 = 0.61" [1] "HS CO2 vs. SLOPE: m = 0.0429, r^2 = 0.03" [1] "LS CO2 vs. SLOPE: m = -0.32, r^2 = 0.44" [1] "HS O2 vs. O2 Vol P: m = -28.1, r^2 = 0.37" [1] "LS O2 vs. O2 Vol P: m = -31.5, r^2 = 0.24" [1] "HS O2 vs. O2 Cell T: m = 14, r^2 = 0.35" [1] "LS O2 vs. O2 Cell T: m = 19.3, r^2 = 0.27" [1] "HS O2 vs. CO2 Vol P: m = -1.5, r^2 = 0" [1] "LS O2 vs. CO2 Vol P: m = -35, r^2 = 0.39" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -3.65, r^2 = 0.04" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -0.729, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -1.5, r^2 = 0" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -35, r^2 = 0.39" [1] "HS O2 vs. LIH2O: m = -132, r^2 = 0.12" [1] "LS O2 vs. LIH2O: m = -286, r^2 = 0.1" [1] "HS O2 vs. SLOPE: m = -0.115, r^2 = 0.16" [1] "LS O2 vs. SLOPE: m = -0.857, r^2 = 0.61" [1] "HS CO2 vs. Time: m = 2.724, r^2 = 0.56" [1] "LS CO2 vs. Time: m = 4.711, r^2 = 0.64" [1] "HS CO2 vs. Cylinder T: m = -0.27, r^2 = 0.23" [1] "LS CO2 vs. Cylinder T: m = -1.07, r^2 = 0.478" [1] "HS CO2 vs. Regulator T: m = -0.032, r^2 = 0.02" [1] "LS CO2 vs. Regulator T: m = -0.256, r^2 = 0.401" [1] "HS CO2 vs. Ref. Volumes T: m = -0.047, r^2 = 0.01" [1] "LS CO2 vs. Ref. Volumes T: m = 0.123, r^2 = 0.005" [1] "HS CO2 vs. Manifold T: m = -0.017, r^2 = 0.01" [1] "LS CO2 vs. Manifold T: m = -0.267, r^2 = 0.304" [1] "HS CO2 vs. Pump Box T: m = 0.028, r^2 = 0.1" [1] "LS CO2 vs. Pump Box T: m = -0.123, r^2 = 0.125" [1] "HS O2 vs. Cylinder T: m = -20.587, r^2 = 0.13" [1] "LS O2 vs. Cylinder T: m = 93.163, r^2 = 0.759" [1] "HS O2 vs. Regulator T: m = 5.87, r^2 = 0.07" [1] "LS O2 vs. Regulator T: m = 17.73, r^2 = 0.402" [1] "HS O2 vs. Ref. Volumes T: m = 54.591, r^2 = 0.69" [1] "LS O2 vs. Ref. Volumes T: m = -48.98, r^2 = 0.17" [1] "HS O2 vs. Manifold T: m = 9.206, r^2 = 0.25" [1] "LS O2 vs. Manifold T: m = 19.266, r^2 = 0.332" [1] "HS O2 vs. Pump Box T: m = 0.081, r^2 = 0" [1] "LS O2 vs. Pump Box T: m = 2.004, r^2 = 0.007" [1] "HS CO2 vs. WT P: m = 0, r^2 = 0" [1] "LS CO2 vs. WT P: m = 0.002, r^2 = 0.11" [1] "HS CO2 vs. SP P: m = 3.64e-06, r^2 = 0" [1] "HS CO2 vs. PACAB comb with SP P: m = 0.053, r^2 = 0.16" [1] "HS CO2 vs. SP P comb with PACAB: m = -0.053, r^2 = 0.16" [1] "LS CO2 vs. SP P: m = 0.00113, r^2 = 0.11" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.058, r^2 = 0.65" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.059, r^2 = 0.65" [1] "HS CO2 vs. WT FL: m = -0.037, r^2 = 0.08" [1] "LS CO2 vs. WT FL: m = -0.237, r^2 = 0.484" [1] "HS CO2 vs. SP FL: m = -0.007, r^2 = 0.02" [1] "LS CO2 vs. SP FL: m = -0.083, r^2 = 0.309" [1] "HS O2 vs. SLPDIFF: m = -0.039, r^2 = 0.01" [1] "LS O2 vs. SLPDIFF: m = -1.637, r^2 = 0.377" [1] "HS O2 vs. WT P: m = 0.071, r^2 = 0.13" [1] "LS O2 vs. WT P: m = -0.287, r^2 = 0.676" [1] "HS O2 vs. SP P: m = 0.075, r^2 = 0.14" [1] "LS O2 vs. SP P: m = -0.286, r^2 = 0.657" [1] "HS O2 vs. WT FL: m = 7.024, r^2 = 0.28" [1] "LS O2 vs. WT FL: m = 7.785, r^2 = 0.109" [1] "HS O2 vs. SP FL: m = -1.179, r^2 = 0.05" [1] "LS O2 vs. SP FL: m = 8.379, r^2 = 0.665" [1] "Plotting calibration shapes" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.59" [1] "Median all HS CO2 SD = 0.66" [1] "Median all LS CO2 SD = 0.55" [1] "Median all LT CO2 SD = 0.57" [1] "Median all WT CO2 SD = 0.59" [1] "Median all HS or LS CO2 SD = 0.59" [1] "Median all cal O2 SD = 2.91" [1] "Median all HS O2 SD = 2.57" [1] "Median all LS O2 SD = 3.17" [1] "Median all LT O2 SD = 3.86" [1] "Median all WT O2 SD = 2.76" [1] "Median all HS or LS O2 SD = 2.89" [1] "Median all cal CO2 Slope = 0.01" [1] "Median all HS CO2 Slope = 0.05" [1] "Median all LS CO2 Slope = 0.03" [1] "Median all LT CO2 Slope = -0.21" [1] "Median all WT CO2 Slope = 0.01" [1] "Median all HS or LS CO2 Slope = 0.04" [1] "Median all cal O2 Slope = 1.2" [1] "Median all HS O2 Slope = 1.34" [1] "Median all LS O2 Slope = 1.9" [1] "Median all LT O2 Slope = -3.23" [1] "Median all WT O2 Slope = -0.02" [1] "Median all HS or LS O2 Slope = 1.34" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 7.93 per meg" [1] "Initial O2 Calibration Offset = -18.09 per meg" [1] "SD of O2 Calibration (post-takeoff) = 7.93 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -18.09 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO1-2 inlet volumes" [1] "before any lag: 58857.41 81535.85" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 37.9 at 108.4 sccm" [1] "Median O2 delay + tlagff = 38.8 at 108.4 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 37.1 at 108.4 sccm" [1] "Median O2 delay from 3-way + tlagff = 38 at 108.4 sccm" [1] "after calc and ff lag: 58820.24 81492.77" [1] "2025-05-13 11:26:52 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 39 1-Hz values because of data gaps at:" [1] 304.9433 304.9433 304.9433 304.9433 304.9433 304.9433 304.9433 304.9433 [9] 304.9434 304.9434 304.9434 304.9434 304.9434 304.9434 304.9434 304.9434 [17] 304.9434 304.9435 304.9435 304.9435 304.9435 304.9435 304.9435 304.9435 [25] 304.9435 304.9436 304.9436 304.9436 304.9436 304.9436 304.9436 304.9436 [33] 304.9436 304.9436 304.9437 304.9437 304.9437 304.9437 304.9437 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 11 O2 values from manual exclude period 304.759594 to 304.759942" [1] "Not reporting 11 APO values from manual exclude period 304.759594 to 304.759942" [1] "Not reporting 18 O2 values from manual exclude period 304.852969 to 304.853433" [1] "Not reporting 18 APO values from manual exclude period 304.852969 to 304.853433" [1] "Not reporting 18 O2 values from manual exclude period 304.872248 to 304.872828" [1] "Not reporting 18 APO values from manual exclude period 304.872248 to 304.872828" [1] "Not reporting 28 O2 values from manual exclude period 304.927297 to 304.927994" [1] "Not reporting 28 APO values from manual exclude period 304.927297 to 304.927994" [1] "Not reporting 26 O2 values from manual exclude period 304.936007 to 304.936704" [1] "Not reporting 26 APO values from manual exclude period 304.936007 to 304.936704" [1] "Not reporting 31 O2 values from manual exclude period 304.934033 to 304.934846" [1] "Not reporting 31 APO values from manual exclude period 304.934033 to 304.934846" [1] "Not reporting 19 O2 values from manual exclude period 304.936123 to 304.936588" [1] "Not reporting 19 APO values from manual exclude period 304.936123 to 304.936588" [1] "Not reporting 15 O2 values from manual exclude period 304.936936 to 304.937401" [1] "Not reporting 15 APO values from manual exclude period 304.936936 to 304.937401" [1] "Not reporting 174 O2 values from manual exclude period 304.939027 to 304.944253" [1] "Not reporting 174 APO values from manual exclude period 304.939027 to 304.944253" [1] "Not reporting 31 smoothed O2 values from manual exclude period 304.759138313125 to 304.75949225233" [1] "Not reporting 31 smoothed APO values from manual exclude period 304.759138313125 to 304.75949225233" [1] "Not reporting 41 smoothed O2 values from manual exclude period 304.852504944675 to 304.852980510876" [1] "Not reporting 41 smoothed APO values from manual exclude period 304.852504944675 to 304.852980510876" [1] "Not reporting 51 smoothed O2 values from manual exclude period 304.87176284272 to 304.872352858582" [1] "Not reporting 51 smoothed APO values from manual exclude period 304.87176284272 to 304.872352858582" [1] "Not reporting 61 smoothed O2 values from manual exclude period 304.926855848101 to 304.927562864812" [1] "Not reporting 61 smoothed APO values from manual exclude period 304.926855848101 to 304.927562864812" [1] "Not reporting 61 smoothed O2 values from manual exclude period 304.935541380377 to 304.936246064786" [1] "Not reporting 61 smoothed APO values from manual exclude period 304.935541380377 to 304.936246064786" [1] "Not reporting 71 smoothed O2 values from manual exclude period 304.93357027688 to 304.934389095134" [1] "Not reporting 71 smoothed APO values from manual exclude period 304.93357027688 to 304.934389095134" [1] "Not reporting 41 smoothed O2 values from manual exclude period 304.935657251236 to 304.936130300647" [1] "Not reporting 41 smoothed APO values from manual exclude period 304.935657251236 to 304.936130300647" [1] "Not reporting 41 smoothed O2 values from manual exclude period 304.936466749617 to 304.936938815884" [1] "Not reporting 41 smoothed APO values from manual exclude period 304.936466749617 to 304.936938815884" [1] "Not reporting 445 smoothed O2 values from manual exclude period 304.938553839236 to 304.943754409434" [1] "Not reporting 445 smoothed APO values from manual exclude period 304.938553839236 to 304.943754409434" [1] "Not reporting 31 smoothed O2 values from manual exclude period 304.759138313125 to 304.75949225233" [1] "Not reporting 31 smoothed APO values from manual exclude period 304.759138313125 to 304.75949225233" [1] "Not reporting 41 smoothed O2 values from manual exclude period 304.852504944675 to 304.852980510876" [1] "Not reporting 41 smoothed APO values from manual exclude period 304.852504944675 to 304.852980510876" [1] "Not reporting 51 smoothed O2 values from manual exclude period 304.87176284272 to 304.872352858582" [1] "Not reporting 51 smoothed APO values from manual exclude period 304.87176284272 to 304.872352858582" [1] "Not reporting 61 smoothed O2 values from manual exclude period 304.926855848101 to 304.927562864812" [1] "Not reporting 61 smoothed APO values from manual exclude period 304.926855848101 to 304.927562864812" [1] "Not reporting 61 smoothed O2 values from manual exclude period 304.935541380377 to 304.936246064786" [1] "Not reporting 61 smoothed APO values from manual exclude period 304.935541380377 to 304.936246064786" [1] "Not reporting 71 smoothed O2 values from manual exclude period 304.93357027688 to 304.934389095134" [1] "Not reporting 71 smoothed APO values from manual exclude period 304.93357027688 to 304.934389095134" [1] "Not reporting 41 smoothed O2 values from manual exclude period 304.935657251236 to 304.936130300647" [1] "Not reporting 41 smoothed APO values from manual exclude period 304.935657251236 to 304.936130300647" [1] "Not reporting 41 smoothed O2 values from manual exclude period 304.936466749617 to 304.936938815884" [1] "Not reporting 41 smoothed APO values from manual exclude period 304.936466749617 to 304.936938815884" [1] "Not reporting 445 smoothed O2 values from manual exclude period 304.938553839236 to 304.943754409434" [1] "Not reporting 445 smoothed APO values from manual exclude period 304.938553839236 to 304.943754409434" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 22707 records [1] 1 2269 22707 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -267.19 -276.39 -270.38 -270.28 -259.94 [1] 25725 [1] "Average Date / Time for slice RF01 = 2009-10-31 19:36:51.1824538707733" [1] "sum(lsel) = 1573" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 80.2663 838.5918 [1] 80.2663 838.5918 [1] 161.4082 919.7337 [1] 2.510571e-03 9.999990e+05 [1] "highestmid = 724.990448" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF01 APO_AO2 range = -251.57,-209.4" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 22707 records [1] 1 2269 22707 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA -505.60 -513.90 -507.22 -506.03 -494.42 [1] 25732 [1] "Average Date / Time for slice RF01 = 2009-10-31 19:36:51.1824538707733" [1] "sum(lsel) = 1573" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 80.2663 838.5918 [1] 80.2663 838.5918 [1] 161.4082 919.7337 [1] 2.510571e-03 9.999990e+05 [1] "highestmid = 724.990448" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF01 O2_AO2 range = -500.07,-398.6" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 22707 records [1] 1 2269 22707 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 293 293 293 293 293 293 [1] 73301 73310 73320 73330 73340 73350 [1] "2009-10-20 20:21:41 UTC" "2009-10-20 20:21:50 UTC" [3] "2009-10-20 20:22:00 UTC" "2009-10-20 20:22:10 UTC" [5] "2009-10-20 20:22:20 UTC" "2009-10-20 20:22:30 UTC" [1] NA 395.548 395.067 395.126 394.694 394.812 [1] 25785 [1] "Average Date / Time for slice RF01 = 2009-10-31 19:40:21.7498459815979" [1] "sum(lsel) = 1623" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 80.2663 838.5918 [1] 80.2663 838.5918 [1] 161.4082 919.7337 [1] 2.510571e-03 9.999990e+05 [1] "highestmid = 724.990448" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO2 RF01 CO2_AO2 range = 384.67,398.43" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 41 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"