[1] "2025-05-13 11:06:56 MDT" options [1,] "file" "090114a" [2,] "flight" "RF04" [3,] "project" "HIPPO1" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "0" [20,] "tlagff1" "0" [21,] "tlagopt" "FALSE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "himl" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "FALSE" [39,] "inpopt" "FALSE" [40,] "inpvals" "46,17,6" [41,] "inpsteps" "2,2,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "TRUE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "adjacent" [68,] "updncorr" "4pt" [69,] "updnave" "090114a" [1] "Reading in flight and plotting intervals" Read 14 records [1] "Reading in /scr/raf/stephens/AO2DAT/090114a.mr" Read 14011 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.16 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.2 seconds" [1] "New JOGEST = 2.2 seconds" [1] "New VALVE SKIP = 27 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/090114a.hr" Read 56049 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 14011 56049 [1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH" [1] 14011 56049 [1] "Converting hrdata statout" [1] "Tue May 13 11:06:57 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30055 description: HS CO2 = 324.38 O2 = -176.1" [1] "position 2 cylinder OK30057 description: LS CO2 = 400.7 O2 = -682.4" [1] "position 3 cylinder OK30053 description: LT CO2 = 405.42 O2 = -408.7" [1] "position 4 cylinder OK170199 description: WT CO2 = 384.87 O2 = -794.9" [1] 324.3800 400.7007 405.4175 384.8677 NA [1] -176.0533 -682.4435 -408.6965 -794.8633 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.623 co2off = 142.1 o2scla = -0.049 o2offa = -40.1" [1] "(dV/V)/(dXO2/XO2) = -4.242" [1] "(dV/V)/d(O2/N2) = -3.353" [1] "Reading in very high resolution timeseries" Read 280220 records [1] 280220 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 11:06:57 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 11:06:59 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -3.353" [1] "o2scaleavenew_drelVdrelP = -4.242" [1] "median(o2scalenew) = -3.353" [1] "Empirical dV/V vs dP/P relationship =-3.462, r^2 =0.004, damping =0.816" [1] "Tue May 13 11:06:59 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "Plotting Jog Shapes" [1] "Tue May 13 11:07:39 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 964600.94592 SECONDS" [1] "Tue May 13 11:07:39 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 66 medium-rate record(s) with accumulation errors" [1] "Removed 52 medium-rate record(s) > eco or < ico" [1] "from: 13894" [1] "to: 13945" [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 2230 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -6988.953 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -6980.117 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -6976.031 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 22.094 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 64 [1] 227 [1] 250 [1] 250 [1] 250 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 75 14.79698 1952.72316 970692.9 -1 [2,] 76 14.79701 1169.18674 968775.0 1 [3,] 77 14.79703 254.10262 968960.7 -1 [4,] 79 14.79708 -195.42397 968552.1 -1 [5,] 145 14.79876 -293.23495 967841.4 -1 [6,] 146 14.79878 373.17239 968106.8 1 [7,] 147 14.79881 1117.99849 969230.0 -1 [8,] 149 14.79886 1500.58708 969562.0 -1 [9,] 215 14.80054 1593.80080 968802.3 -1 [10,] 216 14.80057 1279.91545 967240.9 1 [11,] 217 14.80059 918.36253 968121.0 -1 [12,] 405 14.80546 1334.38475 968004.2 -1 [13,] 406 14.80550 1787.91670 966682.9 1 [14,] 407 14.80554 2354.81815 969055.4 -1 [15,] 457 14.80724 1749.03893 968344.8 -1 [16,] 458 14.80728 2529.74689 966616.0 1 [17,] 459 14.80731 3709.58277 970271.4 -1 [18,] 460 14.80734 5323.54956 966576.2 1 [19,] 461 14.80737 6535.78035 973041.4 -1 [20,] 462 14.80741 6832.42168 966598.7 1 [21,] 463 14.80744 5888.21382 972252.7 -1 [22,] 464 14.80747 4359.70287 966599.6 1 [23,] 465 14.80750 2849.33234 969347.7 -1 [24,] 467 14.80757 2453.62452 968983.9 -1 [25,] 468 14.80760 2629.02725 966623.0 1 [26,] 469 14.80763 3000.07841 969557.2 -1 [27,] 470 14.80766 3664.60231 966587.7 1 [28,] 471 14.80769 3983.60120 970503.2 -1 [29,] 472 14.80772 3688.29673 966612.7 1 [30,] 473 14.80776 2973.62528 969442.4 -1 [31,] 474 14.80779 2229.76283 966569.8 1 [32,] 475 14.80782 1696.81197 968206.2 -1 [33,] 493 14.80841 1294.84829 967816.7 -1 [34,] 494 14.80844 2070.22956 966508.5 1 [35,] 495 14.80849 3496.63082 970002.2 -1 [36,] 497 14.80857 3462.43033 969855.8 -1 [37,] 498 14.80860 2926.94529 966534.6 1 [38,] 499 14.80862 2467.97815 968923.8 -1 [39,] 501 14.80867 2532.80708 968978.8 -1 [40,] 502 14.80870 2978.58977 966510.5 1 [41,] 503 14.80872 3404.30885 969883.6 -1 [42,] 509 14.80887 3514.33350 969898.6 -1 [43,] 510 14.80890 3224.73491 966439.0 1 [44,] 511 14.80893 2670.19271 968995.7 -1 [45,] 512 14.80895 2138.87664 966423.8 1 [46,] 513 14.80898 1671.18875 968061.6 -1 [47,] 517 14.80908 1620.69789 968038.3 -1 [48,] 518 14.80910 1819.22980 966440.8 1 [49,] 519 14.80913 2261.45786 968710.3 -1 [50,] 520 14.80915 3122.01868 966526.9 1 [51,] 521 14.80918 3867.58200 970405.5 -1 [52,] 540 14.80967 2023.21246 966679.0 1 [53,] 541 14.80969 2085.59862 968631.4 -1 [54,] 542 14.80972 2147.55933 966450.6 1 [55,] 551 14.80995 1762.61690 968286.1 -1 [56,] 552 14.80998 1631.22705 966430.2 1 [57,] 553 14.81000 1473.61794 967609.6 -1 [58,] 554 14.81003 1311.15443 966054.1 1 [59,] 560 14.81018 1031.97717 966546.6 1 [60,] 561 14.81020 980.63136 967432.8 -1 [61,] 562 14.81023 980.16521 966339.3 1 [62,] 563 14.81025 968.91130 967145.3 -1 [63,] 564 14.81028 951.75361 966107.5 1 [64,] 592 14.81100 759.72987 966044.1 1 [65,] 593 14.81102 865.84170 966670.8 -1 [66,] 594 14.81105 980.71180 965710.2 1 [67,] 595 14.81108 803.68927 966645.8 -1 [68,] 596 14.81110 562.52960 966009.5 1 [69,] 597 14.81113 583.11459 966522.5 -1 [70,] 598 14.81115 747.14530 965717.0 1 [71,] 604 14.81130 818.62238 965568.5 1 [72,] 605 14.81133 767.48167 966486.8 -1 [73,] 606 14.81136 756.98909 965847.9 1 [74,] 628 14.81192 694.54577 965247.2 1 [75,] 629 14.81194 696.12800 965775.0 -1 [76,] 630 14.81197 722.87890 964956.6 1 [77,] 1049 14.82269 727.11311 959025.8 -1 [78,] 1053 14.82279 686.26377 958944.7 -1 [79,] 1054 14.82281 1020.30714 958243.9 1 [80,] 1055 14.82284 1383.69083 959607.4 -1 [81,] 1123 14.82458 1571.72371 959413.8 -1 [82,] 1124 14.82461 771.48216 957913.4 1 [83,] 1125 14.82463 -96.75775 957822.2 -1 [84,] 1127 14.82468 -333.23164 957466.4 -1 [85,] 1193 14.82636 -334.53035 957375.8 -1 [86,] 1194 14.82639 50.43166 957688.4 1 [87,] 1195 14.82641 459.05422 958162.0 -1 [88,] 2135 14.85041 572.32952 967154.5 -1 [89,] 2139 14.85051 451.05396 967027.1 -1 [90,] 2140 14.85053 113.87193 966589.6 1 [91,] 2141 14.85056 -212.89489 966376.6 -1 [92,] 2207 14.85224 -309.41267 966608.6 -1 [93,] 2208 14.85227 -97.76919 966901.5 1 [94,] 2209 14.85229 313.77138 967311.8 -1 [95,] 2210 14.85232 920.75471 966939.0 1 [96,] 2211 14.85235 1539.94517 968462.3 -1 [97,] 3434 14.88575 832.86900 964768.8 1 [98,] 3435 14.88602 1121.47375 964457.9 1 [99,] 3436 14.88605 964.46035 965572.6 -1 [100,] 3437 14.88608 855.72031 964735.0 1 [101,] 3504 14.88820 848.78099 965238.3 -1 [102,] 3508 14.88833 948.09744 965327.7 -1 [103,] 3509 14.88836 1265.01016 964361.5 1 [104,] 3510 14.88839 1549.25298 965852.1 -1 [105,] 3578 14.89055 1333.18261 964907.9 -1 [106,] 3579 14.89058 579.02735 963633.7 1 [107,] 3580 14.89062 -237.01880 963396.1 -1 [108,] 3648 14.89277 90.37175 963537.0 -1 [109,] 3649 14.89280 440.39517 963409.2 1 [110,] 3650 14.89284 682.53321 964102.0 -1 [111,] 4392 14.91631 773.90792 970125.1 -1 [112,] 4396 14.91645 414.44900 969909.5 -1 [113,] 4397 14.91648 -11.18928 969602.1 1 [114,] 4398 14.91651 -337.13968 969317.0 -1 [115,] 4466 14.91866 -105.03908 973004.4 -1 [116,] 4467 14.91869 729.13094 973108.2 1 [117,] 4468 14.91872 1483.13008 974642.4 -1 [118,] 4538 14.92092 1899.53417 977756.5 -1 [119,] 4606 14.92307 1667.69618 979701.9 -1 [120,] 4607 14.92310 1259.37195 978134.6 1 [121,] 4608 14.92313 896.83614 979026.0 -1 [122,] 4635 14.92398 926.65178 978787.9 1 [123,] 4636 14.92401 895.52441 979808.0 -1 [124,] 4637 14.92404 820.65452 978997.3 1 [125,] 5386 14.94403 791.04754 981230.2 -1 [126,] 5390 14.94413 908.31373 981527.8 -1 [127,] 5391 14.94416 1215.23114 980626.5 1 [128,] 5392 14.94418 1501.13973 982164.7 -1 [129,] 5460 14.94592 1259.59555 984677.1 -1 [130,] 5461 14.94594 481.08568 983533.6 1 [131,] 5462 14.94597 -202.72239 983355.0 -1 [132,] 5530 14.94769 -90.50050 986211.4 -1 [133,] 5531 14.94771 310.05676 986309.1 1 [134,] 5532 14.94774 721.48626 987106.9 -1 [135,] 6472 14.97170 643.16714 991079.4 -1 [136,] 6476 14.97180 632.63350 991110.8 -1 [137,] 6477 14.97183 269.63414 990489.0 1 [138,] 6478 14.97185 -107.84735 990347.1 -1 [139,] 6480 14.97190 -327.55560 990133.4 -1 [140,] 6546 14.97359 -378.87723 991437.4 -1 [141,] 6547 14.97362 333.03787 991870.5 1 [142,] 6548 14.97364 1137.27717 993077.1 -1 [143,] 6550 14.97369 1504.23831 993445.8 -1 [144,] 6618 14.97542 993.80597 995240.5 -1 [145,] 6629 14.97571 754.50037 994481.3 1 [146,] 6630 14.97573 688.21463 995275.9 -1 [147,] 6631 14.97576 547.27454 994729.7 1 [148,] 7558 14.99938 655.82402 1000035.7 -1 [149,] 7562 14.99948 739.55283 1000052.8 -1 [150,] 7563 14.99951 1039.58662 999326.6 1 [151,] 7564 14.99953 1361.68913 1000745.1 -1 [152,] 7632 15.00127 1578.41710 1001428.5 -1 [153,] 7633 15.00130 769.86989 999829.7 1 [154,] 7634 15.00132 -44.81857 999719.7 -1 [155,] 7636 15.00137 -258.16209 999509.1 -1 [156,] 7702 15.00304 -368.45597 1000616.8 -1 [157,] 7703 15.00307 -39.74608 1000986.9 1 [158,] 7704 15.00310 357.94801 1001431.4 -1 [159,] 7825 15.00618 772.17885 1003288.3 1 [160,] 7826 15.00621 723.22972 1004173.7 -1 [161,] 7827 15.00623 665.55679 1003506.1 1 [162,] 8301 15.01859 610.94650 1009757.9 1 [163,] 8302 15.01861 695.73241 1010311.1 -1 [164,] 8303 15.01864 907.00485 1009498.6 1 [165,] 8305 15.01870 801.31416 1009682.8 1 [166,] 8306 15.01872 833.22179 1010424.2 -1 [167,] 8307 15.01875 902.90633 1009471.6 1 [168,] 8308 15.01877 839.24352 1010463.2 -1 [169,] 8309 15.01880 763.07870 1009737.3 1 [170,] 8636 15.02711 809.70118 1007174.1 -1 [171,] 8640 15.02721 636.84577 1006919.1 -1 [172,] 8641 15.02723 107.08341 1006316.1 1 [173,] 8642 15.02726 -308.70466 1005986.7 -1 [174,] 8708 15.02893 -406.75299 1006251.3 -1 [175,] 8709 15.02896 -331.70353 1006646.4 1 [176,] 8710 15.02898 74.81569 1006752.1 -1 [177,] 8711 15.02901 816.19212 1006584.0 1 [178,] 8712 15.02903 1439.35057 1008146.3 -1 [179,] 8782 15.03081 1918.69306 1009436.3 -1 [180,] 8850 15.03253 1652.85845 1010960.9 -1 [181,] 8851 15.03256 1199.36530 1009371.4 1 [182,] 8852 15.03258 862.22648 1010297.7 -1 [183,] 9211 15.04171 756.29288 1020090.0 1 [184,] 9212 15.04173 676.62961 1020900.0 -1 [185,] 9213 15.04176 650.39709 1020301.2 1 [186,] 9219 15.04191 863.94845 1020193.9 1 [187,] 9220 15.04193 726.43647 1021059.9 -1 [188,] 9221 15.04196 612.12263 1020421.1 1 [189,] 9222 15.04198 694.78368 1021052.1 -1 [190,] 9223 15.04201 861.91607 1020159.5 1 [191,] 9726 15.05479 791.33983 1015051.5 -1 [192,] 9732 15.05494 1480.88327 1015633.4 -1 [193,] 9800 15.05667 1184.26579 1014645.7 -1 [194,] 9801 15.05670 494.64339 1013490.7 1 [195,] 9802 15.05672 -211.53534 1013244.4 -1 [196,] 9870 15.05846 -93.59005 1013538.4 -1 [197,] 9871 15.05848 292.45401 1013592.9 1 [198,] 9872 15.05851 596.89910 1014212.2 -1 [199,] 9897 15.05914 526.47024 1013906.5 1 [200,] 9898 15.05917 648.78633 1014469.4 -1 [201,] 9899 15.05919 699.06680 1013687.6 1 [202,] 9902 15.05926 725.02981 1014510.1 -1 [203,] 10816 15.08248 710.93387 1017426.1 -1 [204,] 10820 15.08258 617.16676 1017174.7 -1 [205,] 10821 15.08261 101.16382 1016521.6 1 [206,] 10822 15.08264 -291.97523 1016178.7 -1 [207,] 10890 15.08437 34.45055 1015283.2 -1 [208,] 10891 15.08439 740.95165 1015212.8 1 [209,] 10892 15.08442 1359.22729 1016636.9 -1 [210,] 10960 15.08614 1220.69798 1015676.3 -1 [211,] 10961 15.08616 939.15357 1014425.5 1 [212,] 10962 15.08619 716.92647 1015160.9 -1 [213,] 11906 15.11017 684.77580 1025984.2 -1 [214,] 11910 15.11027 836.06828 1026062.6 -1 [215,] 11911 15.11029 1202.89746 1025150.8 1 [216,] 11912 15.11032 1501.55174 1026734.5 -1 [217,] 11978 15.11200 1601.35871 1025469.3 -1 [218,] 11979 15.11203 1549.25581 1023787.6 1 [219,] 11980 15.11205 1204.20717 1024962.7 -1 [220,] 11981 15.11208 464.70968 1023766.4 1 [221,] 11982 15.11210 -205.73646 1023502.0 -1 [222,] 12025 15.11320 -394.91031 1023037.5 1 [223,] 12026 15.11322 -316.09973 1022550.6 -1 [224,] 12027 15.11325 -211.91033 1022790.0 1 [225,] 12050 15.11383 -50.24312 1022522.8 -1 [226,] 12051 15.11385 268.51405 1022538.0 1 [227,] 12052 15.11388 609.21885 1023157.4 -1 [228,] 12996 15.13786 679.40008 1029686.5 -1 [229,] 13000 15.13796 572.53630 1029608.9 -1 [230,] 13001 15.13799 127.20518 1029039.8 1 [231,] 13002 15.13801 -278.31387 1028729.5 -1 [232,] 13068 15.13969 -335.83625 1029215.6 -1 [233,] 13069 15.13972 -178.74336 1029567.9 1 [234,] 13070 15.13974 226.44451 1029902.6 -1 [235,] 13071 15.13977 891.15928 1029606.6 1 [236,] 13072 15.13979 1462.67634 1031162.2 -1 [237,] 13140 15.14152 1345.48067 1031499.0 -1 [238,] 13141 15.14155 1049.65951 1030128.1 1 [239,] 13142 15.14157 788.02637 1030958.9 -1 [240,] 13210 15.14330 1015.81775 1031604.7 -1 [241,] 13211 15.14332 1443.49351 1030517.4 1 [242,] 13212 15.14335 1818.36563 1032397.3 -1 [243,] 13280 15.14506 1648.55872 1032508.8 -1 [244,] 13281 15.14509 1248.85788 1030845.5 1 [245,] 13282 15.14512 858.35195 1031754.2 -1 [246,] 13889 15.16054 197.64785 1029849.4 1 [247,] 13890 15.16057 2198.11829 1030680.5 -1 [248,] 13891 15.16059 3162.31860 1029513.7 1 [249,] 13892 15.16062 -5900.09952 1030648.5 -1 [250,] 13893 15.16069 -23417.03806 1029776.1 1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 282 14.80223 1.058413e+06 [2,] 1124 14.82461 3.597330e+02 [3,] 3259 14.88024 1.294787e+03 [4,] 3602 14.89132 9.530450e+02 [5,] 3912 14.90114 9.958932e+05 [6,] 9806 15.05682 7.355960e+11 [7,] 11144 15.09081 2.958450e+02 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -165.777 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -121.371 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -99.277 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 22.094 PER MEG" [1] 324.3800 400.7007 405.4175 384.8677 NA [1] -176.0533 -682.4435 -408.6965 -794.8633 NA [1] "Nominal linear calibrations:" [1] "co2scl = 0.623 co2off = 142.25 o2scla = -0.05 o2offa = -40.2" [1] "(dV/V)/(dXO2/XO2) = -4.218" [1] "(dV/V)/d(O2/N2) = -3.334" [1] "Finding cal and sample periods" [1] "Median Cal: 2.53 minutes" [1] "Average Cal: 2.63 minutes" [1] "Shortest Cal: 2.51 minutes" [1] "Longest Cal: 3.16 minutes" [1] "Reading in aircraft data" [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = -0.00835" [1] "HS CO2 vs. PACAB: m = -0.00139, r^2 = 0.02" [1] "LS CO2 vs. PACAB: m = -0.0153, r^2 = 0.61" [1] "HS+LS LIH2O vs. PACAB: m = 1.42e-05" [1] "HS LIH2O vs. PACAB: m = 3.87e-05, r^2 = 0.29" [1] "LS LIH2O vs. PACAB: m = -1.02e-05, r^2 = 0.01" [1] "HS+LS CO2 vs. LIH2O: m = 20.6" [1] "HS CO2 vs. LIH2O: m = -15, r^2 = 0.01" [1] "LS CO2 vs. LIH2O: m = 56.3, r^2 = 0.14" [1] "APCO2 vs. PACAB: m = -0.0819, r^2 = 0.15" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = 0.17" [1] "HS O2 vs. PACAB: m = 0.263, r^2 = 0.14" [1] "LS O2 vs. PACAB: m = 0.0759, r^2 = 0.06" [1] "HS+LS O2 vs. LIH2O: m = -2190" [1] "HS O2 vs. LIH2O: m = -2660, r^2 = 0.08" [1] "LS O2 vs. LIH2O: m = -1730, r^2 = 0.36" [1] "HS+LS O2 vs. PAO2: m = -39.7" [1] "HS O2 vs. PAO2: m = -59.7, r^2 = 0.7" [1] "LS O2 vs. PAO2: m = -19.7, r^2 = 0.43" [1] "HS+LS O2 vs. TPBOX: m = -1.36" [1] "HS O2 vs. TPBOX: m = -3.56, r^2 = 0.03" [1] "LS O2 vs. TPBOX: m = 0.835, r^2 = 0.01" [1] "APO vs. PACAB: m = 0.894, r^2 = 0.15" [1] "APO vs. PAO2: m = -14.3, r^2 = 0.01" [1] "APO vs. TPBOX: m = 1.8, r^2 = 0" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -1.14, r^2 = 0.01" [1] "LS CO2 vs. LiCor Cell P: m = -3.91, r^2 = 0.04" [1] "HS CO2 vs. CO2 Vol P: m = 1.15, r^2 = 0.57" [1] "LS CO2 vs. CO2 Vol P: m = 1.41, r^2 = 0.5" [1] "HS CO2 vs. SLOPE: m = 0.343, r^2 = 0.12" [1] "LS CO2 vs. SLOPE: m = -0.611, r^2 = 0.12" [1] "HS O2 vs. O2 Vol P: m = -49.8, r^2 = 0.87" [1] "LS O2 vs. O2 Vol P: m = -15.1, r^2 = 0.48" [1] "HS O2 vs. O2 Cell T: m = 28.2, r^2 = 0.69" [1] "LS O2 vs. O2 Cell T: m = 9.56, r^2 = 0.55" [1] "HS O2 vs. CO2 Vol P: m = -72.1, r^2 = 0.76" [1] "LS O2 vs. CO2 Vol P: m = -16.4, r^2 = 0.28" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.792, r^2 = 0" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 0.177, r^2 = 0" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -72.1, r^2 = 0.76" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -16.4, r^2 = 0.28" [1] "HS O2 vs. LIH2O: m = -5400, r^2 = 0.51" [1] "LS O2 vs. LIH2O: m = -1950, r^2 = 0.55" [1] "HS O2 vs. SLOPE: m = -0.781, r^2 = 0.23" [1] "LS O2 vs. SLOPE: m = 0.0645, r^2 = 0.02" [1] "HS CO2 vs. Time: m = -0.603, r^2 = 0.01" [1] "LS CO2 vs. Time: m = -1.778, r^2 = 0.07" [1] "HS CO2 vs. Cylinder T: m = -0.804, r^2 = 0.29" [1] "LS CO2 vs. Cylinder T: m = -1.553, r^2 = 0.549" [1] "HS CO2 vs. Regulator T: m = -0.424, r^2 = 0.49" [1] "LS CO2 vs. Regulator T: m = -0.594, r^2 = 0.49" [1] "HS CO2 vs. Ref. Volumes T: m = -0.597, r^2 = 0.25" [1] "LS CO2 vs. Ref. Volumes T: m = -0.783, r^2 = 0.204" [1] "HS CO2 vs. Manifold T: m = -0.347, r^2 = 0.52" [1] "LS CO2 vs. Manifold T: m = -0.366, r^2 = 0.29" [1] "HS CO2 vs. Pump Box T: m = -0.169, r^2 = 0.13" [1] "LS CO2 vs. Pump Box T: m = -0.173, r^2 = 0.112" [1] "HS O2 vs. Cylinder T: m = 54.992, r^2 = 0.46" [1] "LS O2 vs. Cylinder T: m = 5.139, r^2 = 0.025" [1] "HS O2 vs. Regulator T: m = 15.586, r^2 = 0.23" [1] "LS O2 vs. Regulator T: m = 2.112, r^2 = 0.026" [1] "HS O2 vs. Ref. Volumes T: m = 51.485, r^2 = 0.64" [1] "LS O2 vs. Ref. Volumes T: m = 15.613, r^2 = 0.336" [1] "HS O2 vs. Manifold T: m = 23.109, r^2 = 0.78" [1] "LS O2 vs. Manifold T: m = 7.822, r^2 = 0.548" [1] "HS O2 vs. Pump Box T: m = -2.394, r^2 = 0.01" [1] "LS O2 vs. Pump Box T: m = 2.978, r^2 = 0.137" [1] "HS CO2 vs. WT P: m = -0.004, r^2 = 0.12" [1] "LS CO2 vs. WT P: m = -0.012, r^2 = 0.577" [1] "HS CO2 vs. SP P: m = 0.000228, r^2 = 0" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.12, r^2 = 0.41" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.112, r^2 = 0.41" [1] "LS CO2 vs. SP P: m = -0.014, r^2 = 0.59" [1] "LS CO2 vs. PACAB comb with SP P: m = 0.017, r^2 = 0.6" [1] "LS CO2 vs. SP P comb with PACAB: m = -0.029, r^2 = 0.6" [1] "HS CO2 vs. WT FL: m = -0.175, r^2 = 0.36" [1] "LS CO2 vs. WT FL: m = -0.308, r^2 = 0.51" [1] "HS CO2 vs. SP FL: m = -0.045, r^2 = 0.02" [1] "LS CO2 vs. SP FL: m = 0.083, r^2 = 0.035" [1] "HS O2 vs. SLPDIFF: m = 0.435, r^2 = 0.11" [1] "LS O2 vs. SLPDIFF: m = 0.32, r^2 = 0.373" [1] "HS O2 vs. WT P: m = 0.287, r^2 = 0.22" [1] "LS O2 vs. WT P: m = 0.073, r^2 = 0.086" [1] "HS O2 vs. SP P: m = 0.315, r^2 = 0.25" [1] "LS O2 vs. SP P: m = 0.076, r^2 = 0.091" [1] "HS O2 vs. WT FL: m = 15.124, r^2 = 0.92" [1] "LS O2 vs. WT FL: m = 3.366, r^2 = 0.251" [1] "HS O2 vs. SP FL: m = 5.689, r^2 = 0.1" [1] "LS O2 vs. SP FL: m = 0.915, r^2 = 0.017" [1] "Plotting calibration shapes" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.65" [1] "Median all HS CO2 SD = 0.59" [1] "Median all LS CO2 SD = 0.71" [1] "Median all LT CO2 SD = 0.67" [1] "Median all WT CO2 SD = 0.65" [1] "Median all HS or LS CO2 SD = 0.64" [1] "Median all cal O2 SD = 5.56" [1] "Median all HS O2 SD = 5.94" [1] "Median all LS O2 SD = 4.62" [1] "Median all LT O2 SD = 7.76" [1] "Median all WT O2 SD = 5.42" [1] "Median all HS or LS O2 SD = 5.68" [1] "Median all cal CO2 Slope = -0.04" [1] "Median all HS CO2 Slope = -0.05" [1] "Median all LS CO2 Slope = -0.04" [1] "Median all LT CO2 Slope = 0.05" [1] "Median all WT CO2 Slope = -0.06" [1] "Median all HS or LS CO2 Slope = -0.04" [1] "Median all cal O2 Slope = -0.52" [1] "Median all HS O2 Slope = 0.33" [1] "Median all LS O2 Slope = -0.99" [1] "Median all LT O2 Slope = 0.4" [1] "Median all WT O2 Slope = -1.58" [1] "Median all HS or LS O2 Slope = -0.04" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 3.45 per meg" [1] "Initial O2 Calibration Offset = -9.28 per meg" [1] "SD of O2 Calibration (post-takeoff) = 2.32 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = -9.46 per meg" [1] "Last Preflight O2 Calibration Offset (from post-takeoff median) = -9.46 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using HIPPO1-2 inlet volumes" [1] "before any lag: 68686.44 100283.62" [1] "Time lag adjustments = 0 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 39.4 at 106.4 sccm" [1] "Median O2 delay + tlagff = 40.3 at 106.4 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 38 at 106.4 sccm" [1] "Median O2 delay from 3-way + tlagff = 38.9 at 106.4 sccm" [1] "after calc and ff lag: 68646.34 100241.61" [1] "2025-05-13 11:08:34 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 27 1-Hz values because of data gaps at:" [1] 14.88536 14.88537 14.88538 14.88539 14.88541 14.88542 14.88543 14.88544 [9] 14.88545 14.88546 14.88547 14.88549 14.88550 15.16027 15.16028 15.16029 [17] 15.16030 15.16031 15.16032 15.16034 15.16035 15.16036 15.16037 15.16038 [25] 15.16039 15.16041 15.16042 [1] "Calculating 10-sec medians" [1] "Plotting aircraft data" [1] "Correcting for Up/Down APO Differences" [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Not reporting 18 O2 values from manual exclude period 15.1602 to 15.1625" [1] "Not reporting 18 APO values from manual exclude period 15.1602 to 15.1625" [1] "Not reporting 62 smoothed O2 values from manual exclude period 15.1597035814559 to 15.1620138766895" [1] "Not reporting 62 smoothed APO values from manual exclude period 15.1597035814559 to 15.1620138766895" [1] "Not reporting 62 smoothed O2 values from manual exclude period 15.1597035814559 to 15.1620138766895" [1] "Not reporting 62 smoothed APO values from manual exclude period 15.1597035814559 to 15.1620138766895" [1] "Calling hippo_xsect.r to make cross-section plots" [1] "reading in merge file" Read 1 item Read 30301 records [1] 4 3028 30301 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 9 9 9 9 9 9 [1] 73462 73470 73480 73490 73500 73510 [1] "2009-01-09 20:24:22 UTC" "2009-01-09 20:24:30 UTC" [3] "2009-01-09 20:24:40 UTC" "2009-01-09 20:24:50 UTC" [5] "2009-01-09 20:25:00 UTC" "2009-01-09 20:25:10 UTC" [1] -325.69 -324.18 -320.39 -293.97 -292.22 -283.00 [1] 21150 [1] "Average Date / Time for slice RF04 = 2009-01-14 23:37:00.90303778648376" [1] "sum(lsel) = 2403" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 30.82764 838.54170 [1] 30.82764 838.54170 [1] 161.4583 969.1724 [1] 1.030629e-02 9.999990e+05 [1] "highestmid = 670.611786" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO1 RF04 APO_AO2 range = -264.06,-215.79" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 30301 records [1] 4 3028 30301 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 9 9 9 9 9 9 [1] 73462 73470 73480 73490 73500 73510 [1] "2009-01-09 20:24:22 UTC" "2009-01-09 20:24:30 UTC" [3] "2009-01-09 20:24:40 UTC" "2009-01-09 20:24:50 UTC" [5] "2009-01-09 20:25:00 UTC" "2009-01-09 20:25:10 UTC" [1] -609.44 -603.36 -588.97 -534.79 -510.39 -496.66 [1] 21162 [1] "Average Date / Time for slice RF04 = 2009-01-14 23:36:56.9189188480377" [1] "sum(lsel) = 2405" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 30.82764 838.54170 [1] 30.82764 838.54170 [1] 161.4583 969.1724 [1] 1.030629e-02 9.999990e+05 [1] "highestmid = 670.611786" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO1 RF04 O2_AO2 range = -474.34,-394.49" [1] "done outputting" [1] "done plotting" [1] "reading in merge file" Read 1 item Read 30301 records [1] 4 3028 30301 [1] "done reading AO2" [1] 2009 2009 2009 2009 2009 2009 [1] 9 9 9 9 9 9 [1] 73462 73470 73480 73490 73500 73510 [1] "2009-01-09 20:24:22 UTC" "2009-01-09 20:24:30 UTC" [3] "2009-01-09 20:24:40 UTC" "2009-01-09 20:24:50 UTC" [5] "2009-01-09 20:25:00 UTC" "2009-01-09 20:25:10 UTC" [1] 403.897 403.019 401.176 396.714 391.797 390.968 [1] 21185 [1] "Average Date / Time for slice RF04 = 2009-01-14 23:36:31.3077557086945" [1] "sum(lsel) = 2424" [1] "ready to extrapolate/interpolate" [1] "PSXC" [1] 30.82764 838.54170 [1] 30.82764 838.54170 [1] 161.4583 969.1724 [1] 1.030629e-02 9.999990e+05 [1] "highestmid = 670.611786" [1] "done with initial extrapolation" [1] "done with interpolation" [1] "done with full extrapolation" [1] "vtspan = 50" [1] "done with masking" [1] "HIPPO1 RF04 CO2_AO2 range = 383.84,391.08" [1] "done outputting" [1] "done plotting" [1] "Plotting intervals" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "Excluding 42 interpolated O2 values from O2 vs. CO2 plot for tdiff>5" [1] "making html" [1] "making index html"