[1] "2025-05-13 10:20:52 MDT"
      options                                            
 [1,] "file"           "070809d"                         
 [2,] "flight"         "RF18"                            
 [3,] "project"        "ACME07"                          
 [4,] "png"            "TRUE"                            
 [5,] "valveskip"      "60"                              
 [6,] "wtwtco"         "200"                             
 [7,] "spspco"         "500"                             
 [8,] "o2gco"          "500"                             
 [9,] "co2gco"         "50"                              
[10,] "hr"             "TRUE"                            
[11,] "newskip"        "0"                               
[12,] "recalcpd"       "TRUE"                            
[13,] "mrgdir"         "/scr/raf/stephens/HUMERGE"       
[14,] "datdir"         "/scr/raf/stephens/AO2DAT"        
[15,] "netdir"         "/net/www/docs/homes/stephens/AO2"
[16,] "acdatdir"       "/scr/raf/Prod_Data"              
[17,] "logfile"        "TRUE"                            
[18,] "uwyoflag"       "b"                               
[19,] "tlagff0"        "22"                              
[20,] "tlagff1"        "0"                               
[21,] "tlagopt"        "TRUE"                            
[22,] "useoptlag"      "FALSE"                           
[23,] "optto"          "oms"                             
[24,] "acavail"        "TRUE"                            
[25,] "huavail"        "TRUE"                            
[26,] "vxavail"        "TRUE"                            
[27,] "usetlagcalc"    "TRUE"                            
[28,] "inlet"          "aft"                             
[29,] "pcabcorr"       "FALSE"                           
[30,] "pcabforce"      "ave,ave"                         
[31,] "pcabfiltfirst"  "TRUE"                            
[32,] "pao2corr"       "FALSE"                           
[33,] "pao2force"      "ave,ave"                         
[34,] "pao2filtfirst"  "TRUE"                            
[35,] "tpboxcorr"      "FALSE"                           
[36,] "tpboxforce"     "ave,ave"                         
[37,] "tpboxfiltfirst" "TRUE"                            
[38,] "inpcorr"        "TRUE"                            
[39,] "inpopt"         "TRUE"                            
[40,] "inpvals"        "22,-6,20"                        
[41,] "inpsteps"       "0,0,0"                           
[42,] "actype"         "nc2asc"                          
[43,] "outputdesc"     "250508"                          
[44,] "readmergenew"   "FALSE"                           
[45,] "c13cor"         "TRUE"                            
[46,] "outdir"         "."                               
[47,] "co2caltype"     "posttoonly"                      
[48,] "o2caltype"      "posttoonly"                      
[49,] "lih2oco"        "-10"                             
[50,] "nasasmth"       "FALSE"                           
[51,] "o2slpcorr"      "FALSE"                           
[52,] "co2slpcorr"     "FALSE"                           
[53,] "co2usewt"       "TRUE"                            
[54,] "skipeffects"    "FALSE"                           
[55,] "hrlinredo"      "FALSE"                           
[56,] "jogsdfilt"      "FALSE"                           
[57,] "jogsdfact"      "2"                               
[58,] "use120sec"      "FALSE"                           
[59,] "lowerdec"       "TRUE"                            
[60,] "agg10sec"       "FALSE"                           
[61,] "plotxsect"      "FALSE"                           
[62,] "reavecals"      "FALSE"                           
[63,] "locate"         "FALSE"                           
[64,] "icartt"         "0"                               
[65,] "icarttrev"      "0"                               
[66,] "mmsrev"         "TRUE"                            
[67,] "usespline"      "4pt"                             
[68,] "updnave"        "070809d"                         
[1] "Reading in flight and plotting intervals"
Read 8 records
[1] "Reading in  /scr/raf/stephens/AO2DAT/070809d.mr"
Read 5181 records
[1] "Converting statout"
[1] "Median(diff(mrdata$time) = 2.07 seconds"
[1] "Median(diff(mrdata$time,lag=240)/240) = 2.11 seconds"
[1] "New JOGEST = 2.11 seconds"
[1] "New VALVE SKIP = 28 jogs"
[1] "Reading in  /scr/raf/stephens/AO2DAT/070809d.hr"
Read 15543 records
[1] "HR FILE MATCHES"
[1] "Converting hrdata statout"
[1] "Tue May 13 10:20:53 AM MDT 2025 done"
[1] "Reading in cylinder log"
Read 2575 records
[1] "Finding cylinder IDs"
Read 1 record
Read 536 records
[1] "position 1 cylinder OK30057 description: HS CO2 = 349.9 O2 = -501.8"
[1] "position 2 cylinder OK30053 description: LS CO2 = 461.83 O2 = -479"
[1] "position 3 cylinder OK30055 description: LT CO2 = 349.52 O2 = -487.8"
[1] "position 4 cylinder OK30054 description: WT CO2 = 353.36 O2 = -330.7"
[1] 349.8973 461.8316 349.5235 353.3631       NA
[1] -501.8178 -479.0412 -487.7755 -330.7093        NA
[1] "Nominal linear calibrations:"
[1] "co2scl = 1.028  co2off = -4.59 o2scla = -0.104  o2offa = -51.6"
[1] "(dV/V)/(dXO2/XO2) =  -2.021"
[1] "(dV/V)/d(O2/N2) =  -1.598"
[1] "Reading in very high resolution timeseries"
Read 77715 records
[1] 77715
[1] "VHR FILE MATCHES"
[1] "Recalculating pdo2 and pdref corrections"
[1] "Tue May 13 10:20:53 AM MDT 2025 done approxing mr variables"
[1] "Tue May 13 10:20:53 AM MDT 2025 done undoing flight corrections"
[1] "o2scaleavenew = -1.598"
[1] "o2scaleavenew_drelVdrelP = -2.021"
[1] "median(o2scalenew) = -1.609"
[1] "Empirical dV/V vs dP/P relationship =0.04, r^2 =0.001, damping =-0.02"
[1] "Tue May 13 10:20:53 AM MDT 2025 done redoing corrections"
[1] "JOGAVES MATCHES"
[1] "Plotting Jog Shapes"
[1] "Tue May 13 10:21:01 AM MDT 2025 done recreating mr"
[1] "Using SPLINE interpolation between jogs"
[1] "RECALC TIME MATCHES"
[1] "Tue May 13 10:21:01 AM MDT 2025 done recreating mr o2diffs"
[1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT"
[1] 1.3698 1.5952
[1] -1.729549 -1.284304
[1] "Screening 0 MR O2 values when lamp off"
[1] "Screening 0 HR O2 values when lamp off"
[1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 30.898  PER MEG"
[1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 81.482  PER MEG"
[1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 99.213  PER MEG"
[1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 45.897  PER MEG"
[1] "Removing O2 and CO2 glitches"
[1] 0
[1] 0
[1] 7
[1] 7
[1] 7
[1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):"
     [,1]     [,2]     [,3]      [,4] [,5]
[1,]  841 221.8611 206.1954 1013650.9   -1
[2,] 1683 221.8817 264.4092 1004833.8   -1
[3,] 2529 221.9024 245.3359 1000386.0   -1
[4,] 3373 221.9231 284.1326  997062.0   -1
[5,] 3523 221.9267 120.5604  996564.6   -1
[6,] 4219 221.9437 291.1986  997555.9   -1
[7,] 5063 221.9644 346.2250  997245.6   -1
[1] "MAX O2 DIFFERENCE (ORIG-UNCORR) 30.898  PER MEG"
[1] "MAX O2 DIFFERENCE (ORIG-PDCORR) 81.482  PER MEG"
[1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) 99.213  PER MEG"
[1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 45.897  PER MEG"
[1] 349.8973 461.8316 349.5235 353.3631       NA
[1] -501.8178 -479.0412 -487.7755 -330.7093        NA
[1] "Nominal linear calibrations:"
[1] "co2scl = 1.028  co2off = -4.59 o2scla = -0.104  o2offa = -51.8"
[1] "(dV/V)/(dXO2/XO2) =  -2.004"
[1] "(dV/V)/d(O2/N2) =  -1.585"
[1] "Finding cal and sample periods"
[1] "Median Cal: 2.44 minutes"
[1] "Average Cal: 2.41 minutes"
[1] "Shortest Cal: 1.83 minutes"
[1] "Longest Cal: 2.53 minutes"
[1] "Reading in aircraft data"
Read 12040 records
[1] "Plotting CO2 cabin P sensitivity"
[1] "HS+LS CO2 vs. PACAB: m = 0.00412"
[1] "HS CO2 vs. PACAB: m = 0.00221, r^2 = 0.09"
[1] "LS CO2 vs. PACAB: m = 0.00602, r^2 = 0.6"
[1] "HS+LS LIH2O vs. PACAB: m = -0.00691"
[1] "HS LIH2O vs. PACAB: m = -0.0133, r^2 = 0.51"
[1] "LS LIH2O vs. PACAB: m = -0.000558, r^2 = 0"
[1] "HS+LS CO2 vs. LIH2O: m = 0.28"
[1] "HS CO2 vs. LIH2O: m = 0.0334, r^2 = 0.01"
[1] "LS CO2 vs. LIH2O: m = 0.527, r^2 = 0.35"
[1] "APCO2 vs. PACAB: m = 0.0352, r^2 = 0"
[1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity"
[1] "HS+LS O2 vs. PACAB: m = 0.835"
[1] "HS O2 vs. PACAB: m = 1.15, r^2 = 0.24"
[1] "LS O2 vs. PACAB: m = 0.516, r^2 = 0.74"
[1] "HS+LS O2 vs. LIH2O: m = -27.1"
[1] "HS O2 vs. LIH2O: m = -69.4, r^2 = 0.71"
[1] "LS O2 vs. LIH2O: m = 15.1, r^2 = 0.06"
[1] "HS+LS O2 vs. PAO2: m = -11.7"
[1] "HS O2 vs. PAO2: m = -34.5, r^2 = 0.99"
[1] "LS O2 vs. PAO2: m = 11.1, r^2 = 0.47"
[1] "HS+LS O2 vs. TPBOX: m = -0.000365"
[1] "HS O2 vs. TPBOX: m = 3.32, r^2 = 0.3"
[1] "LS O2 vs. TPBOX: m = -3.32, r^2 = 0.86"
[1] "APO vs. PACAB: m = -0.301, r^2 = 0"
[1] "APO vs. PAO2: m = 3.52, r^2 = 0.01"
[1] "APO vs. TPBOX: m = -2.52, r^2 = 0.01"
[1] "Plotting cal meas P and T sensitivity"
[1] "HS CO2 vs. LiCor Cell P: m = 0.36, r^2 = 0.47"
[1] "LS CO2 vs. LiCor Cell P: m = 0.0651, r^2 = 0.01"
[1] "HS CO2 vs. CO2 Vol P: m = 0.0471, r^2 = 0.48"
[1] "LS CO2 vs. CO2 Vol P: m = 0.0022, r^2 = 0"
[1] "HS CO2 vs. SLOPE: m = -0.2, r^2 = 0.57"
[1] "LS CO2 vs. SLOPE: m = 0.147, r^2 = 0.14"
[1] "HS O2 vs. O2 Vol P: m = -4.5, r^2 = 0.08"
[1] "LS O2 vs. O2 Vol P: m = 0.227, r^2 = 0"
[1] "HS O2 vs. O2 Cell T: m = 9.51, r^2 = 0.46"
[1] "LS O2 vs. O2 Cell T: m = -0.24, r^2 = 0.06"
[1] "HS O2 vs. CO2 Vol P: m = 1.08, r^2 = 0.05"
[1] "LS O2 vs. CO2 Vol P: m = -0.894, r^2 = 0.06"
[1] "HS O2 vs. O2 Vol P / O2 Cell T: m = 0.697, r^2 = 0.03"
[1] "LS O2 vs. O2 Vol P / O2 Cell T: m = 3.29, r^2 = 0.26"
[1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = 1.08, r^2 = 0.05"
[1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -0.894, r^2 = 0.06"
[1] "HS O2 vs. LIH2O: m = -34.7, r^2 = 0.45"
[1] "LS O2 vs. LIH2O: m = 21.4, r^2 = 0.18"
[1] "HS O2 vs. SLOPE: m = 0.125, r^2 = 0.06"
[1] "LS O2 vs. SLOPE: m = -0.156, r^2 = 0.26"
[1] "HS CO2 vs. Time: m = 3.276, r^2 = 0.86"
[1] "LS CO2 vs. Time: m = 4.759, r^2 = 0.95"
[1] "HS CO2 vs. Cylinder T: m = 0.179, r^2 = 0.34"
[1] "LS CO2 vs. Cylinder T: m = 0.118, r^2 = 0.112"
[1] "HS CO2 vs. Regulator T: m = 0.222, r^2 = 0.36"
[1] "LS CO2 vs. Regulator T: m = -0.011, r^2 = 0.001"
[1] "HS CO2 vs. Ref. Volumes T: m = -0.005, r^2 = 0"
[1] "LS CO2 vs. Ref. Volumes T: m = -0.022, r^2 = 0.505"
[1] "HS CO2 vs. Manifold T: m = -0.048, r^2 = 0.63"
[1] "LS CO2 vs. Manifold T: m = -0.025, r^2 = 0.148"
[1] "HS CO2 vs. Pump Box T: m = -0.007, r^2 = 0.03"
[1] "LS CO2 vs. Pump Box T: m = -0.033, r^2 = 0.402"
[1] "HS O2 vs. Cylinder T: m = 5.423, r^2 = 0.07"
[1] "LS O2 vs. Cylinder T: m = 1.368, r^2 = 0.006"
[1] "HS O2 vs. Regulator T: m = 12.637, r^2 = 0.25"
[1] "LS O2 vs. Regulator T: m = -1.925, r^2 = 0.009"
[1] "HS O2 vs. Ref. Volumes T: m = -2.717, r^2 = 0.13"
[1] "LS O2 vs. Ref. Volumes T: m = -1.188, r^2 = 0.604"
[1] "HS O2 vs. Manifold T: m = -2.386, r^2 = 0.32"
[1] "LS O2 vs. Manifold T: m = -1.377, r^2 = 0.186"
[1] "HS O2 vs. Pump Box T: m = -0.059, r^2 = 0"
[1] "LS O2 vs. Pump Box T: m = -1.262, r^2 = 0.242"
[1] "HS CO2 vs. WT P: m = -0.002, r^2 = 0.01"
[1] "LS CO2 vs. WT P: m = 0.009, r^2 = 0.578"
[1] "HS CO2 vs. SP P: m = 0.0027, r^2 = 0.03"
[1] "HS CO2 vs. PACAB comb with SP P: m = -0.02, r^2 = 0.05"
[1] "HS CO2 vs. SP P comb with PACAB: m = 0.016, r^2 = 0.05"
[1] "LS CO2 vs. SP P: m = 0.0101, r^2 = 0.76"
[1] "LS CO2 vs. PACAB comb with SP P: m = 0.002, r^2 = 0.61"
[1] "LS CO2 vs. SP P comb with PACAB: m = 0.009, r^2 = 0.61"
[1] "HS CO2 vs. WT FL: m = 0.025, r^2 = 0.02"
[1] "LS CO2 vs. WT FL: m = -0.053, r^2 = 0.157"
[1] "HS CO2 vs. SP FL: m = 0.042, r^2 = 0.09"
[1] "LS CO2 vs. SP FL: m = -0.081, r^2 = 0.371"
[1] "HS O2 vs. SLPDIFF: m = -0.194, r^2 = 0.1"
[1] "LS O2 vs. SLPDIFF: m = -0.285, r^2 = 0.544"
[1] "HS O2 vs. WT P: m = -0.507, r^2 = 0.13"
[1] "LS O2 vs. WT P: m = 0.496, r^2 = 0.688"
[1] "HS O2 vs. SP P: m = -0.465, r^2 = 0.11"
[1] "LS O2 vs. SP P: m = 0.582, r^2 = 0.748"
[1] "HS O2 vs. WT FL: m = 2.746, r^2 = 0.05"
[1] "LS O2 vs. WT FL: m = -2.639, r^2 = 0.16"
[1] "HS O2 vs. SP FL: m = 4.184, r^2 = 0.19"
[1] "LS O2 vs. SP FL: m = -4.671, r^2 = 0.501"
[1] "Plotting calibration shapes"
[1] "Plotting calibration sds and slopes (and running sds)"
[1] "Median all cal CO2 SD = 0.28"
[1] "Median all HS CO2 SD = 0.28"
[1] "Median all LS CO2 SD = 0.28"
[1] "Median all LT CO2 SD = 0.31"
[1] "Median all WT CO2 SD = 0.28"
[1] "Median all HS or LS CO2 SD = 0.28"
[1] "Median all cal O2 SD = 13.78"
[1] "Median all HS O2 SD = 12.46"
[1] "Median all LS O2 SD = 13.54"
[1] "Median all LT O2 SD = 13.01"
[1] "Median all WT O2 SD = 14.2"
[1] "Median all HS or LS O2 SD = 13"
[1] "Median all cal CO2 Slope = 0.03"
[1] "Median all HS CO2 Slope = -0.04"
[1] "Median all LS CO2 Slope = 0.04"
[1] "Median all LT CO2 Slope = -0.11"
[1] "Median all WT CO2 Slope = -0.07"
[1] "Median all HS or LS CO2 Slope = 0.03"
[1] "Median all cal O2 Slope = -1.21"
[1] "Median all HS O2 Slope = 0.75"
[1] "Median all LS O2 Slope = -0.49"
[1] "Median all LT O2 Slope = -6.57"
[1] "Median all WT O2 Slope = -2.91"
[1] "Median all HS or LS O2 Slope = 0.13"
[1] "Plotting calibration fits"
[1] "Plotting calibration parameters"
[1] "SD of O2 Calibration = 6.61 per meg"
[1] "Initial O2 Calibration Offset = -1.8 per meg"
[1] "SD of O2 Calibration (post-takeoff) = 6.61 per meg"
[1] "Initial O2 Calibration Offset (from post-takeoff median) = -1.8 per meg"
[1] "Plotting all variables"
[1] "Plotting calibration data"
[1] "using ACME07 inlet volumes"
[1] "before any lag: 72603.22 83583.45"
[1] "Time lag adjustments = 22 + 0 * P/Flow seconds"
[1] "Median CO2 delay + tlagff = 88.8 at 144.9 sccm"
[1] "Median O2 delay + tlagff = 90 at 144.9 sccm"
[1] "For comparison to empirical LP lag times:"
[1] "Median CO2 delay from 3-way + tlagff = 76.8 at 144.9 sccm"
[1] "Median O2 delay from 3-way + tlagff = 78.1 at 144.9 sccm"
[1] "after calc and ff lag: 72512.8 83490.14"
[1] "2025-05-13 10:21:15 MDT"
[1] "Calculating 1-sec interpolated values"
[1] "Screened 1052 1-Hz values because of data gaps at:"
   [1] 221.8309 221.8309 221.8309 221.8309 221.8309 221.8309 221.8309 221.8309
   [9] 221.8309 221.8310 221.8310 221.8310 221.8310 221.8310 221.8310 221.8310
  [17] 221.8310 221.8311 221.8311 221.8311 221.8311 221.8311 221.8311 221.8311
  [25] 221.8311 221.8311 221.8312 221.8312 221.8312 221.8312 221.8312 221.8312
  [33] 221.8312 221.8312 221.8313 221.8313 221.8313 221.8313 221.8313 221.8313
  [41] 221.8313 221.8313 221.8313 221.8314 221.8314 221.8314 221.8314 221.8314
  [49] 221.8314 221.8314 221.8314 221.8314 221.8315 221.8315 221.8315 221.8315
  [57] 221.8315 221.8315 221.8315 221.8315 221.8316 221.8316 221.8316 221.8316
  [65] 221.8316 221.8316 221.8316 221.8316 221.8316 221.8317 221.8317 221.8317
  [73] 221.8317 221.8317 221.8317 221.8317 221.8317 221.8317 221.8318 221.8318
  [81] 221.8318 221.8318 221.8318 221.8318 221.8318 221.8318 221.8319 221.8319
  [89] 221.8319 221.8319 221.8319 221.8319 221.8319 221.8319 221.8319 221.8320
  [97] 221.8320 221.8320 221.8320 221.8320 221.8320 221.8320 221.8320 221.8320
 [105] 221.8321 221.8321 221.8321 221.8321 221.8321 221.8321 221.8321 221.8321
 [113] 221.8322 221.8322 221.8322 221.8322 221.8322 221.8322 221.8322 221.8322
 [121] 221.8322 221.8323 221.8323 221.8323 221.8323 221.8323 221.8323 221.8323
 [129] 221.8323 221.8323 221.8324 221.8324 221.8324 221.8324 221.8324 221.8324
 [137] 221.8324 221.8324 221.8325 221.8325 221.8325 221.8325 221.8325 221.8325
 [145] 221.8325 221.8325 221.8325 221.8326 221.8326 221.8326 221.8326 221.8326
 [153] 221.8326 221.8326 221.8326 221.8327 221.8327 221.8327 221.8327 221.8327
 [161] 221.8327 221.8327 221.8327 221.8327 221.8328 221.8328 221.8328 221.8328
 [169] 221.8328 221.8328 221.8328 221.8328 221.8328 221.8329 221.8329 221.8329
 [177] 221.8329 221.8329 221.8329 221.8329 221.8329 221.8330 221.8330 221.8330
 [185] 221.8330 221.8330 221.8330 221.8330 221.8330 221.8330 221.8331 221.8331
 [193] 221.8331 221.8331 221.8331 221.8331 221.8331 221.8331 221.8331 221.8332
 [201] 221.8332 221.8332 221.8332 221.8332 221.8332 221.8332 221.8332 221.8333
 [209] 221.8333 221.8333 221.8333 221.8333 221.8333 221.8333 221.8333 221.8333
 [217] 221.8334 221.8334 221.8334 221.8334 221.8334 221.8334 221.8334 221.8334
 [225] 221.8334 221.8335 221.8335 221.8335 221.8335 221.8335 221.8335 221.8335
 [233] 221.8335 221.8336 221.8336 221.8336 221.8336 221.8336 221.8336 221.8336
 [241] 221.8336 221.8336 221.8337 221.8337 221.8337 221.8337 221.8337 221.8337
 [249] 221.8337 221.8337 221.8338 221.8338 221.8338 221.8338 221.8338 221.8338
 [257] 221.8338 221.8338 221.8338 221.8339 221.8339 221.8339 221.8339 221.8339
 [265] 221.8339 221.8339 221.8339 221.8339 221.8340 221.8340 221.8340 221.8340
 [273] 221.8340 221.8340 221.8340 221.8340 221.8341 221.8341 221.8341 221.8341
 [281] 221.8341 221.8341 221.8341 221.8341 221.8341 221.8342 221.8342 221.8342
 [289] 221.8342 221.8342 221.8342 221.8342 221.8342 221.8342 221.8343 221.8343
 [297] 221.8343 221.8343 221.8343 221.8343 221.8343 221.8343 221.8344 221.8344
 [305] 221.8344 221.8344 221.8344 221.8344 221.8344 221.8344 221.8344 221.8345
 [313] 221.8345 221.8345 221.8345 221.8345 221.8345 221.8345 221.8345 221.8345
 [321] 221.8346 221.8346 221.8346 221.8346 221.8346 221.8346 221.8346 221.8346
 [329] 221.8347 221.8347 221.8347 221.8347 221.8347 221.8347 221.8347 221.8347
 [337] 221.8347 221.8348 221.8348 221.8348 221.8348 221.8348 221.8348 221.8348
 [345] 221.8348 221.8348 221.8349 221.8349 221.8349 221.8349 221.8349 221.8349
 [353] 221.8349 221.8349 221.8350 221.8350 221.8350 221.8350 221.8350 221.8350
 [361] 221.8350 221.8350 221.8350 221.8351 221.8351 221.8351 221.8351 221.8351
 [369] 221.8351 221.8351 221.8351 221.8352 221.8352 221.8352 221.8352 221.8352
 [377] 221.8352 221.8352 221.8352 221.8352 221.8353 221.8353 221.8353 221.8353
 [385] 221.8353 221.8353 221.8353 221.8353 221.8353 221.8354 221.8354 221.8354
 [393] 221.8354 221.8354 221.8354 221.8354 221.8354 221.8355 221.8355 221.8355
 [401] 221.8355 221.8355 221.8355 221.8355 221.8355 221.8355 221.8356 221.8356
 [409] 221.8356 221.8356 221.8356 221.8356 221.8356 221.8356 221.8356 221.8357
 [417] 221.8357 221.8357 221.8357 221.8357 221.8357 221.8357 221.8357 221.8358
 [425] 221.8358 221.8358 221.8358 221.8358 221.8358 221.8358 221.8358 221.8358
 [433] 221.8359 221.8359 221.8359 221.8359 221.8359 221.8359 221.8359 221.8359
 [441] 221.8359 221.8360 221.8360 221.8360 221.8360 221.8360 221.8360 221.8360
 [449] 221.8360 221.8361 221.8361 221.8361 221.8361 221.8361 221.8361 221.8361
 [457] 221.8361 221.8361 221.8362 221.8362 221.8362 221.8362 221.8362 221.8362
 [465] 221.8362 221.8362 221.8363 221.8363 221.8363 221.8363 221.8363 221.8363
 [473] 221.8363 221.8363 221.8363 221.8364 221.8364 221.8364 221.8364 221.8364
 [481] 221.8364 221.8364 221.8364 221.8364 221.8365 221.8365 221.8365 221.8365
 [489] 221.8365 221.8365 221.8365 221.8365 221.8366 221.8366 221.8366 221.8366
 [497] 221.8366 221.8366 221.8366 221.8366 221.8366 221.8367 221.8367 221.8367
 [505] 221.8367 221.8367 221.8367 221.8367 221.8367 221.8367 221.8368 221.8368
 [513] 221.8368 221.8368 221.8368 221.8368 221.8368 221.8368 221.8369 221.8369
 [521] 221.8369 221.8369 221.8369 221.8369 221.8369 221.8369 221.8369 221.8370
 [529] 221.8370 221.8370 221.8370 221.8370 221.8370 221.8370 221.8370 221.8370
 [537] 221.8371 221.8371 221.8371 221.8371 221.8371 221.8371 221.8371 221.8371
 [545] 221.8372 221.8372 221.8372 221.8372 221.8372 221.8372 221.8372 221.8372
 [553] 221.8372 221.8373 221.8373 221.8373 221.8373 221.8373 221.8373 221.8373
 [561] 221.8373 221.8373 221.8374 221.8374 221.8374 221.8374 221.8374 221.8374
 [569] 221.8374 221.8374 221.8375 221.8375 221.8375 221.8375 221.8375 221.8375
 [577] 221.8375 221.8375 221.8375 221.8376 221.8376 221.8376 221.8376 221.8376
 [585] 221.8376 221.8376 221.8376 221.8377 221.8377 221.8377 221.8377 221.8377
 [593] 221.8377 221.8377 221.8377 221.8377 221.8378 221.8378 221.8378 221.8378
 [601] 221.8378 221.8378 221.8378 221.8378 221.8378 221.8379 221.8379 221.8379
 [609] 221.8379 221.8379 221.8379 221.8379 221.8379 221.8380 221.8380 221.8380
 [617] 221.8380 221.8380 221.8380 221.8380 221.8380 221.8380 221.8381 221.8381
 [625] 221.8381 221.8381 221.8381 221.8381 221.8381 221.8381 221.8381 221.8382
 [633] 221.8382 221.8382 221.8382 221.8382 221.8382 221.8382 221.8382 221.8383
 [641] 221.8383 221.8383 221.8383 221.8383 221.8383 221.8383 221.8383 221.8383
 [649] 221.8384 221.8384 221.8384 221.8384 221.8384 221.8384 221.8384 221.8384
 [657] 221.8384 221.8385 221.8385 221.8385 221.8385 221.8385 221.8385 221.8385
 [665] 221.8385 221.8386 221.8386 221.8386 221.8386 221.8386 221.8386 221.8386
 [673] 221.8386 221.8386 221.8387 221.8387 221.8387 221.8387 221.8387 221.8387
 [681] 221.8387 221.8387 221.8388 221.8388 221.8388 221.8388 221.8388 221.8388
 [689] 221.8388 221.8388 221.8388 221.8389 221.8389 221.8389 221.8389 221.8389
 [697] 221.8389 221.8389 221.8389 221.8389 221.8390 221.8390 221.8390 221.8390
 [705] 221.8390 221.8390 221.8390 221.8390 221.8391 221.8391 221.8391 221.8391
 [713] 221.8391 221.8391 221.8391 221.8391 221.8391 221.8392 221.8392 221.8392
 [721] 221.8392 221.8392 221.9664 221.9664 221.9664 221.9664 221.9664 221.9664
 [729] 221.9665 221.9665 221.9665 221.9665 221.9665 221.9665 221.9665 221.9665
 [737] 221.9666 221.9666 221.9666 221.9666 221.9666 221.9666 221.9666 221.9666
 [745] 221.9666 221.9667 221.9667 221.9667 221.9667 221.9667 221.9667 221.9667
 [753] 221.9667 221.9667 221.9668 221.9668 221.9668 221.9668 221.9668 221.9668
 [761] 221.9668 221.9668 221.9669 221.9669 221.9669 221.9669 221.9669 221.9669
 [769] 221.9669 221.9669 221.9669 221.9670 221.9670 221.9670 221.9670 221.9670
 [777] 221.9670 221.9670 221.9670 221.9670 221.9671 221.9671 221.9671 221.9671
 [785] 221.9671 221.9671 221.9671 221.9671 221.9672 221.9672 221.9672 221.9672
 [793] 221.9672 221.9672 221.9672 221.9672 221.9672 221.9673 221.9673 221.9673
 [801] 221.9673 221.9673 221.9673 221.9673 221.9673 221.9673 221.9674 221.9674
 [809] 221.9674 221.9674 221.9674 221.9674 221.9674 221.9674 221.9675 221.9675
 [817] 221.9675 221.9675 221.9675 221.9675 221.9675 221.9675 221.9675 221.9676
 [825] 221.9676 221.9676 221.9676 221.9676 221.9676 221.9676 221.9676 221.9677
 [833] 221.9677 221.9677 221.9677 221.9677 221.9677 221.9677 221.9677 221.9677
 [841] 221.9678 221.9678 221.9678 221.9678 221.9678 221.9678 221.9678 221.9678
 [849] 221.9678 221.9679 221.9679 221.9679 221.9679 221.9679 221.9679 221.9679
 [857] 221.9679 221.9680 221.9680 221.9680 221.9680 221.9680 221.9680 221.9680
 [865] 221.9680 221.9680 221.9681 221.9681 221.9681 221.9681 221.9681 221.9681
 [873] 221.9681 221.9681 221.9681 221.9682 221.9682 221.9682 221.9682 221.9682
 [881] 221.9682 221.9682 221.9682 221.9683 221.9683 221.9683 221.9683 221.9683
 [889] 221.9683 221.9683 221.9683 221.9683 221.9684 221.9684 221.9684 221.9684
 [897] 221.9684 221.9684 221.9684 221.9684 221.9684 221.9685 221.9685 221.9685
 [905] 221.9685 221.9685 221.9685 221.9685 221.9685 221.9686 221.9686 221.9686
 [913] 221.9686 221.9686 221.9686 221.9686 221.9686 221.9686 221.9687 221.9687
 [921] 221.9687 221.9687 221.9687 221.9687 221.9687 221.9687 221.9688 221.9688
 [929] 221.9688 221.9688 221.9688 221.9688 221.9688 221.9688 221.9688 221.9689
 [937] 221.9689 221.9689 221.9689 221.9689 221.9689 221.9689 221.9689 221.9689
 [945] 221.9690 221.9690 221.9690 221.9690 221.9690 221.9690 221.9690 221.9690
 [953] 221.9691 221.9691 221.9691 221.9691 221.9691 221.9691 221.9691 221.9691
 [961] 221.9691 221.9692 221.9692 221.9692 221.9692 221.9692 221.9692 221.9692
 [969] 221.9692 221.9692 221.9693 221.9693 221.9693 221.9693 221.9693 221.9693
 [977] 221.9693 221.9693 221.9694 221.9694 221.9694 221.9694 221.9694 221.9694
 [985] 221.9694 221.9694 221.9694 221.9695 221.9695 221.9695 221.9695 221.9695
 [993] 221.9695 221.9695 221.9695 221.9695 221.9696 221.9696 221.9696 221.9696
[1001] 221.9696 221.9696 221.9696 221.9696 221.9697 221.9697 221.9697 221.9697
[1009] 221.9697 221.9697 221.9697 221.9697 221.9697 221.9698 221.9698 221.9698
[1017] 221.9698 221.9698 221.9698 221.9698 221.9698 221.9698 221.9699 221.9699
[1025] 221.9699 221.9699 221.9699 221.9699 221.9699 221.9699 221.9700 221.9700
[1033] 221.9700 221.9700 221.9700 221.9700 221.9700 221.9700 221.9700 221.9701
[1041] 221.9701 221.9701 221.9701 221.9701 221.9701 221.9701 221.9701 221.9702
[1049] 221.9702 221.9702 221.9702 221.9702
[1] "Calculating 10-sec medians"
[1] "2025-05-13 10:21:25 MDT"
[1] "Optimizing inlet delay"
[1] "2025-05-13 10:21:25 MDT"
[1] "Reading in and averaging other CO2 data"
[1] "2025-05-13 10:21:25 MDT"
[1] "Reading in and averaging h2o mr data"
[1] "Individual fits = tlagff0, tlagff1, intercept, coef, sd"
[1] "Individual CO2 fit to P/Flow =  22 0 -27.4 6.91 10.6"
[1] "Individual CO2 2nd deriv fit to P/Flow =  22 0 -38.5 10.64 10.4"
[1] "Individual VCSEL 2nd deriv fit to P/Flow =  22 0 -10.2 2.45 9"
[1] "Individual CO2 fit to 1/Flow =  22 0 -855.1 123121.31 9"
[1] "Individual CO2 2nd deriv fit to 1/Flow =  22 0 -33.5 4266.31 13"
[1] "Individual VCSEL 2nd deriv fit to 1/Flow =  22 0 -903.2 130009.71 7"
[1] "Combined Fits = tlagff0, tlagff1, intercept, P/flow coef, t-value, 1/flow coef, t-value, sd"
[1] "Combined CO2 fit =  22 0 794.8 1.4 0.18 -5.55 -1.36 9.5"
[1] "Combined CO2 2nd derivative fit =  22 0 -132.1 10.82 1.03 0.64 0.11 10.1"
[1] "Combined VCSEL 2nd derivative fit =  22 0 1010.8 6.22 0.42 -7.14 -0.78 8.8"
[1] "optimization not used: 72512.8 83490.14"
[1] "Recalculating 1-sec interpolated values"
[1] "Recalculating 10-sec medians"
[1] "Plotting aircraft data"
[1] "Calculating inlet pressure correction"
[1] "optaporat= 2.16176503877743"
[1] 22 -6 20
[1] "best rsqd= 0.4999"
[1] "tau = RAIL"
[1] "lag = RAIL"
[1] "sm2 = RAIL"
[1] "Amp = -2.2271"
[1] "r^2= 0.4904"
[1] "sd= 17"
[1] "Recalculating 1-sec O2 interpolated values"
[1] "Recalculating 10-sec O2 medians"
[1] "Outputting data files"
[1] "Plotting intervals"
[1] "making html"
[1] "making index html"