[1] "2025-05-13 10:14:15 MDT" options [1,] "file" "070801b" [2,] "flight" "RF13" [3,] "project" "ACME07" [4,] "png" "TRUE" [5,] "valveskip" "60" [6,] "wtwtco" "200" [7,] "spspco" "500" [8,] "o2gco" "500" [9,] "co2gco" "50" [10,] "hr" "TRUE" [11,] "newskip" "0" [12,] "recalcpd" "TRUE" [13,] "mrgdir" "/scr/raf/stephens/HUMERGE" [14,] "datdir" "/scr/raf/stephens/AO2DAT" [15,] "netdir" "/net/www/docs/homes/stephens/AO2" [16,] "acdatdir" "/scr/raf/Prod_Data" [17,] "logfile" "TRUE" [18,] "uwyoflag" "none" [19,] "tlagff0" "22" [20,] "tlagff1" "0" [21,] "tlagopt" "TRUE" [22,] "useoptlag" "FALSE" [23,] "optto" "oms" [24,] "acavail" "TRUE" [25,] "huavail" "TRUE" [26,] "vxavail" "TRUE" [27,] "usetlagcalc" "TRUE" [28,] "inlet" "aft" [29,] "pcabcorr" "FALSE" [30,] "pcabforce" "ave,ave" [31,] "pcabfiltfirst" "TRUE" [32,] "pao2corr" "FALSE" [33,] "pao2force" "ave,ave" [34,] "pao2filtfirst" "TRUE" [35,] "tpboxcorr" "FALSE" [36,] "tpboxforce" "ave,ave" [37,] "tpboxfiltfirst" "TRUE" [38,] "inpcorr" "TRUE" [39,] "inpopt" "TRUE" [40,] "inpvals" "43,-6,4" [41,] "inpsteps" "6,6,2" [42,] "actype" "nc2asc" [43,] "outputdesc" "250508" [44,] "readmergenew" "FALSE" [45,] "c13cor" "TRUE" [46,] "outdir" "." [47,] "co2caltype" "posttoonly" [48,] "o2caltype" "posttoonly" [49,] "lih2oco" "-10" [50,] "nasasmth" "FALSE" [51,] "o2slpcorr" "FALSE" [52,] "co2slpcorr" "FALSE" [53,] "co2usewt" "TRUE" [54,] "skipeffects" "FALSE" [55,] "hrlinredo" "FALSE" [56,] "jogsdfilt" "FALSE" [57,] "jogsdfact" "2" [58,] "use120sec" "FALSE" [59,] "lowerdec" "TRUE" [60,] "agg10sec" "FALSE" [61,] "plotxsect" "FALSE" [62,] "reavecals" "FALSE" [63,] "locate" "FALSE" [64,] "icartt" "0" [65,] "icarttrev" "0" [66,] "mmsrev" "TRUE" [67,] "usespline" "4pt" [68,] "updnave" "070801b" [1] "Reading in flight and plotting intervals" Read 4 records [1] "Reading in /scr/raf/stephens/AO2DAT/070801b.mr" Read 3790 records [1] "Converting statout" [1] "Median(diff(mrdata$time) = 2.33 seconds" [1] "Median(diff(mrdata$time,lag=240)/240) = 2.38 seconds" [1] "New JOGEST = 2.38 seconds" [1] "New VALVE SKIP = 25 jogs" [1] "Reading in /scr/raf/stephens/AO2DAT/070801b.hr" Read 11374 records [1] "HR FILE LENGTH NOT NSWITCH * MRDATA FILE LENGTH" [1] 3790 11372 [1] "HR FILE LENGTH NOT MULTIPLE OF NSWITCH" [1] 3790 11372 [1] "Converting hrdata statout" [1] "Tue May 13 10:14:15 AM MDT 2025 done" [1] "Reading in cylinder log" Read 2575 records [1] "Finding cylinder IDs" Read 1 record Read 536 records [1] "position 1 cylinder OK30057 description: HS CO2 = 349.89 O2 = -499.8" [1] "position 2 cylinder OK30053 description: LS CO2 = 461.83 O2 = -476.7" [1] "position 3 cylinder OK30055 description: LT CO2 = 349.52 O2 = -485.7" [1] "position 4 cylinder OK170199 description: WT CO2 = 501.32 O2 = -452.3" [1] 349.8944 461.8338 349.5219 501.3206 NA [1] -499.8416 -476.7028 -485.6618 -452.3174 NA [1] "Nominal linear calibrations:" [1] "co2scl = 1.026 co2off = -1.2 o2scla = -0.112 o2offa = -95.2" [1] "(dV/V)/(dXO2/XO2) = -1.876" [1] "(dV/V)/d(O2/N2) = -1.483" [1] "Reading in very high resolution timeseries" Read 56850 records [1] 56850 [1] "VHR FILE MATCHES" [1] "Recalculating pdo2 and pdref corrections" [1] "Tue May 13 10:14:16 AM MDT 2025 done approxing mr variables" [1] "Tue May 13 10:14:16 AM MDT 2025 done undoing flight corrections" [1] "o2scaleavenew = -1.483" [1] "o2scaleavenew_drelVdrelP = -1.876" [1] "median(o2scalenew) = -1.49" [1] "Empirical dV/V vs dP/P relationship =0.079, r^2 =0.007, damping =-0.042" [1] "Tue May 13 10:14:16 AM MDT 2025 done redoing corrections" [1] "JOGAVES MATCHES" [1] "MASKING 15 VHR ROWS TO MAKE JOGS EVEN FOR SHAPE CALCS" [1] "Plotting Jog Shapes" [1] "Tue May 13 10:14:21 AM MDT 2025 done recreating mr" [1] "Using SPLINE interpolation between jogs" [1] "MAX RECALC TIME DIFFERENCE 12317548.549248 SECONDS" [1] "Tue May 13 10:14:21 AM MDT 2025 done recreating mr o2diffs" [1] "Removed 1 medium-rate record(s) with accumulation errors" [1] "O2 SCALE ESTIMATE CHANGED BY MORE THAN 10% IN FLIGHT" [1] 1.2611 1.5954 [1] -1.733222 -1.196876 [1] "Screening 0 MR O2 values when lamp off" [1] "Screening 0 HR O2 values when lamp off" [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -291.317 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -165.155 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -164.722 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 49.473 PER MEG" [1] "Removing O2 and CO2 glitches" [1] 3 [1] 3 [1] 10 [1] 10 [1] 10 [1] "O2 glitches (based on SP-SP, WT-WT, or single jog spikes or steps) found at (row, time, o2diff, o2jog, posneg):" [,1] [,2] [,3] [,4] [,5] [1,] 297 213.8384 -161.06074 1012005.9 -1 [2,] 299 213.8385 104.13032 1012461.3 -1 [3,] 421 213.8418 -179.81220 1012094.4 -1 [4,] 643 213.8480 -162.18512 1010647.7 1 [5,] 644 213.8480 -109.51848 1010468.2 -1 [6,] 645 213.8481 -79.16762 1010440.2 1 [7,] 1210 213.8637 -183.56419 1004765.3 -1 [8,] 1894 213.8825 -156.71439 999838.3 -1 [9,] 3158 213.9167 -154.52330 997591.7 -1 [10,] 3724 213.9318 -93.15239 996635.0 -1 [1] "CO2 glitches found at:" [,1] [,2] [,3] [1,] 78 213.8324 417.572 [2,] 288 213.8382 401.730 [1] "MAX O2 DIFFERENCE (ORIG-UNCORR) -201.588 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDCORR) -148.168 PER MEG" [1] "MAX O2 DIFFERENCE (ORIG-PDPRCORR) -145.532 PER MEG" [1] "MAX O2 DIFFERENCE (PDCORR-PDPRCORR) 49.473 PER MEG" [1] 349.8944 461.8338 349.5219 501.3206 NA [1] -499.8416 -476.7028 -485.6618 -452.3174 NA [1] "Nominal linear calibrations:" [1] "co2scl = 1.026 co2off = -1.19 o2scla = -0.111 o2offa = -93.8" [1] "(dV/V)/(dXO2/XO2) = -1.879" [1] "(dV/V)/d(O2/N2) = -1.485" [1] "Finding cal and sample periods" [1] "Median Cal: 2.74 minutes" [1] "Average Cal: 3.08 minutes" [1] "Shortest Cal: 2.53 minutes" [1] "Longest Cal: 6.32 minutes" [1] "Reading in aircraft data" Read 8794 records [1] "Plotting CO2 cabin P sensitivity" [1] "HS+LS CO2 vs. PACAB: m = 0.00785" [1] "HS CO2 vs. PACAB: m = 0.00524, r^2 = 0.14" [1] "LS CO2 vs. PACAB: m = 0.0105, r^2 = 0.11" [1] "HS+LS LIH2O vs. PACAB: m = 0.0118" [1] "HS LIH2O vs. PACAB: m = 0.00997, r^2 = 0.71" [1] "LS LIH2O vs. PACAB: m = 0.0136, r^2 = 0.95" [1] "HS+LS CO2 vs. LIH2O: m = 0.626" [1] "HS CO2 vs. LIH2O: m = 0.0447, r^2 = 0" [1] "LS CO2 vs. LIH2O: m = 1.21, r^2 = 0.28" [1] "APCO2 vs. PACAB: m = 0.12, r^2 = 0.05" [1] "Plotting O2 cabin P, H2O, PaO2, and TPBox sensitivity" [1] "HS+LS O2 vs. PACAB: m = -1.27" [1] "HS O2 vs. PACAB: m = -0.848, r^2 = 0.41" [1] "LS O2 vs. PACAB: m = -1.7, r^2 = 0.76" [1] "HS+LS O2 vs. LIH2O: m = -52" [1] "HS O2 vs. LIH2O: m = -17.1, r^2 = 0.02" [1] "LS O2 vs. LIH2O: m = -86.9, r^2 = 0.25" [1] "HS+LS O2 vs. PAO2: m = -2.69" [1] "HS O2 vs. PAO2: m = 0.568, r^2 = 0" [1] "LS O2 vs. PAO2: m = -5.95, r^2 = 0.1" [1] "HS+LS O2 vs. TPBOX: m = 3.2" [1] "HS O2 vs. TPBOX: m = 2.62, r^2 = 0.51" [1] "LS O2 vs. TPBOX: m = 3.78, r^2 = 0.92" [1] "APO vs. PACAB: m = -0.958, r^2 = 0.05" [1] "APO vs. PAO2: m = 12.1, r^2 = 0.09" [1] "APO vs. TPBOX: m = -7.29, r^2 = 0.15" [1] "Plotting cal meas P and T sensitivity" [1] "HS CO2 vs. LiCor Cell P: m = -0.211, r^2 = 0.08" [1] "LS CO2 vs. LiCor Cell P: m = -0.783, r^2 = 0.21" [1] "HS CO2 vs. CO2 Vol P: m = -0.0289, r^2 = 0.05" [1] "LS CO2 vs. CO2 Vol P: m = -0.112, r^2 = 0.13" [1] "HS CO2 vs. SLOPE: m = -0.149, r^2 = 0.04" [1] "LS CO2 vs. SLOPE: m = 2.49, r^2 = 0.08" [1] "HS O2 vs. O2 Vol P: m = -4.14, r^2 = 0.03" [1] "LS O2 vs. O2 Vol P: m = 2.27, r^2 = 0.04" [1] "HS O2 vs. O2 Cell T: m = -5.88, r^2 = 0.48" [1] "LS O2 vs. O2 Cell T: m = -0.329, r^2 = 0.01" [1] "HS O2 vs. CO2 Vol P: m = -1.14, r^2 = 0" [1] "LS O2 vs. CO2 Vol P: m = -1.52, r^2 = 0.02" [1] "HS O2 vs. O2 Vol P / O2 Cell T: m = -7.96, r^2 = 0.17" [1] "LS O2 vs. O2 Vol P / O2 Cell T: m = -6.76, r^2 = 0.44" [1] "HS O2 vs. CO2 Vol P / O2 Cell T: m = -1.14, r^2 = 0" [1] "LS O2 vs. CO2 Vol P / O2 Cell T: m = -1.52, r^2 = 0.02" [1] "HS O2 vs. LIH2O: m = -26.4, r^2 = 0.05" [1] "LS O2 vs. LIH2O: m = 32.9, r^2 = 0.14" [1] "HS O2 vs. SLOPE: m = -0.677, r^2 = 0.57" [1] "LS O2 vs. SLOPE: m = -0.58, r^2 = 0.88" [1] "HS CO2 vs. Time: m = 3.812, r^2 = 0.81" [1] "LS CO2 vs. Time: m = 5.157, r^2 = 0.74" [1] "HS CO2 vs. Cylinder T: m = 0.059, r^2 = 0.01" [1] "LS CO2 vs. Cylinder T: m = -0.077, r^2 = 0.003" [1] "HS CO2 vs. Regulator T: m = -0.147, r^2 = 0.25" [1] "LS CO2 vs. Regulator T: m = -0.299, r^2 = 0.295" [1] "HS CO2 vs. Ref. Volumes T: m = -0.031, r^2 = 0.78" [1] "LS CO2 vs. Ref. Volumes T: m = -0.05, r^2 = 0.942" [1] "HS CO2 vs. Manifold T: m = -0.055, r^2 = 0.83" [1] "LS CO2 vs. Manifold T: m = -0.019, r^2 = 0.044" [1] "HS CO2 vs. Pump Box T: m = -0.005, r^2 = 0.02" [1] "LS CO2 vs. Pump Box T: m = 0.013, r^2 = 0.052" [1] "HS O2 vs. Cylinder T: m = -29.287, r^2 = 0.12" [1] "LS O2 vs. Cylinder T: m = -20.287, r^2 = 0.166" [1] "HS O2 vs. Regulator T: m = 9.093, r^2 = 0.06" [1] "LS O2 vs. Regulator T: m = 2.974, r^2 = 0.021" [1] "HS O2 vs. Ref. Volumes T: m = -0.285, r^2 = 0" [1] "LS O2 vs. Ref. Volumes T: m = -0.139, r^2 = 0.005" [1] "HS O2 vs. Manifold T: m = -1.897, r^2 = 0.06" [1] "LS O2 vs. Manifold T: m = 2.794, r^2 = 0.726" [1] "HS O2 vs. Pump Box T: m = 3.989, r^2 = 0.79" [1] "LS O2 vs. Pump Box T: m = 1.85, r^2 = 0.709" [1] "HS CO2 vs. WT P: m = 0.004, r^2 = 0.12" [1] "LS CO2 vs. WT P: m = 0.015, r^2 = 0.182" [1] "HS CO2 vs. SP P: m = 0.00475, r^2 = 0.12" [1] "HS CO2 vs. PACAB comb with SP P: m = -0.024, r^2 = 0.11" [1] "HS CO2 vs. SP P comb with PACAB: m = 0.025, r^2 = 0.11" [1] "LS CO2 vs. SP P: m = 0.0118, r^2 = 0.14" [1] "LS CO2 vs. PACAB comb with SP P: m = -0.011, r^2 = 0.36" [1] "LS CO2 vs. SP P comb with PACAB: m = 0.025, r^2 = 0.36" [1] "HS CO2 vs. WT FL: m = -0.049, r^2 = 0.23" [1] "LS CO2 vs. WT FL: m = -0.086, r^2 = 0.097" [1] "HS CO2 vs. SP FL: m = -0.037, r^2 = 0.2" [1] "LS CO2 vs. SP FL: m = -0.115, r^2 = 0.389" [1] "HS O2 vs. SLPDIFF: m = -0.689, r^2 = 0.75" [1] "LS O2 vs. SLPDIFF: m = 0.316, r^2 = 0.957" [1] "HS O2 vs. WT P: m = -1.072, r^2 = 0.43" [1] "LS O2 vs. WT P: m = -0.018, r^2 = 0" [1] "HS O2 vs. SP P: m = -1.091, r^2 = 0.47" [1] "LS O2 vs. SP P: m = -0.026, r^2 = 0.001" [1] "HS O2 vs. WT FL: m = 1.413, r^2 = 0.01" [1] "LS O2 vs. WT FL: m = 1.13, r^2 = 0.012" [1] "HS O2 vs. SP FL: m = 2.322, r^2 = 0.05" [1] "LS O2 vs. SP FL: m = -1.638, r^2 = 0.057" [1] "Plotting calibration shapes" [1] "Plotting calibration sds and slopes (and running sds)" [1] "Median all cal CO2 SD = 0.28" [1] "Median all HS CO2 SD = 0.25" [1] "Median all LS CO2 SD = 0.31" [1] "Median all LT CO2 SD = 0.26" [1] "Median all WT CO2 SD = 0.33" [1] "Median all HS or LS CO2 SD = 0.28" [1] "Median all cal O2 SD = 13.19" [1] "Median all HS O2 SD = 13.77" [1] "Median all LS O2 SD = 13.68" [1] "Median all LT O2 SD = 12" [1] "Median all WT O2 SD = 12.69" [1] "Median all HS or LS O2 SD = 13.73" [1] "Median all cal CO2 Slope = 0.05" [1] "Median all HS CO2 Slope = -0.04" [1] "Median all LS CO2 Slope = 0.07" [1] "Median all LT CO2 Slope = -0.03" [1] "Median all WT CO2 Slope = 0.27" [1] "Median all HS or LS CO2 Slope = 0.04" [1] "Median all cal O2 Slope = 2.51" [1] "Median all HS O2 Slope = -4.02" [1] "Median all LS O2 Slope = 5.25" [1] "Median all LT O2 Slope = 6.59" [1] "Median all WT O2 Slope = 1.77" [1] "Median all HS or LS O2 Slope = 1.93" [1] "Plotting calibration fits" [1] "Plotting calibration parameters" [1] "SD of O2 Calibration = 5.7 per meg" [1] "Initial O2 Calibration Offset = 0 per meg" [1] "SD of O2 Calibration (post-takeoff) = 5.7 per meg" [1] "Initial O2 Calibration Offset (from post-takeoff median) = 0 per meg" [1] "Plotting all variables" [1] "Plotting calibration data" [1] "using ACME07 inlet volumes" [1] "before any lag: 71735.93 80657.34" [1] "Time lag adjustments = 22 + 0 * P/Flow seconds" [1] "Median CO2 delay + tlagff = 88.1 at 145.7 sccm" [1] "Median O2 delay + tlagff = 89.4 at 145.7 sccm" [1] "For comparison to empirical LP lag times:" [1] "Median CO2 delay from 3-way + tlagff = 76.6 at 145.7 sccm" [1] "Median O2 delay from 3-way + tlagff = 77.8 at 145.7 sccm" [1] "after calc and ff lag: 71653.71 80565.7" [1] "2025-05-13 10:14:32 MDT" [1] "Calculating 1-sec interpolated values" [1] "Screened 93 1-Hz values because of data gaps at:" [1] 213.9325 213.9325 213.9326 213.9326 213.9326 213.9326 213.9326 213.9326 [9] 213.9326 213.9326 213.9327 213.9327 213.9327 213.9327 213.9327 213.9327 [17] 213.9327 213.9327 213.9327 213.9328 213.9328 213.9328 213.9328 213.9328 [25] 213.9328 213.9328 213.9328 213.9328 213.9329 213.9329 213.9329 213.9329 [33] 213.9329 213.9329 213.9329 213.9329 213.9330 213.9330 213.9330 213.9330 [41] 213.9330 213.9330 213.9330 213.9330 213.9330 213.9331 213.9331 213.9331 [49] 213.9331 213.9331 213.9331 213.9331 213.9331 213.9331 213.9332 213.9332 [57] 213.9332 213.9332 213.9332 213.9332 213.9332 213.9332 213.9333 213.9333 [65] 213.9333 213.9333 213.9333 213.9333 213.9333 213.9333 213.9333 213.9334 [73] 213.9334 213.9334 213.9334 213.9334 213.9334 213.9334 213.9334 213.9334 [81] 213.9335 213.9335 213.9335 213.9335 213.9335 213.9335 213.9335 213.9335 [89] 213.9336 213.9336 213.9336 213.9336 213.9336 [1] "Calculating 10-sec medians" [1] "2025-05-13 10:14:39 MDT" [1] "Optimizing inlet delay" [1] "2025-05-13 10:14:39 MDT" [1] "Reading in and averaging other CO2 data" [1] "2025-05-13 10:14:39 MDT" [1] "Reading in and averaging h2o mr data" [1] "Individual fits = tlagff0, tlagff1, intercept, coef, sd" [1] "Individual CO2 fit to P/Flow = 22 0 -37.5 15 7.3" [1] "Individual CO2 2nd deriv fit to P/Flow = 22 0 3.4 2.73 11.4" [1] "Individual VCSEL 2nd deriv fit to P/Flow = 22 0 -24.3 12.45 10.3" [1] "Individual CO2 fit to 1/Flow = 22 0 412.4 -59402.26 11.7" [1] "Individual CO2 2nd deriv fit to 1/Flow = 22 0 -361.2 54151.14 9.5" [1] "Individual VCSEL 2nd deriv fit to 1/Flow = 22 0 1274.1 -183558.4 10.6" [1] "Combined Fits = tlagff0, tlagff1, intercept, P/flow coef, t-value, 1/flow coef, t-value, sd" [1] "Combined CO2 fit = 22 0 978.3 23.61 2.02 -7.14 -1.11 7" [1] "Combined CO2 2nd derivative fit = 22 0 1205.6 14.64 1.31 -8.49 -1.42 9" [1] "Combined VCSEL 2nd derivative fit = 22 0 940 19.8 0.58 -6.78 -0.23 10.7" [1] "optimization not used: 71653.71 80565.7" [1] "Recalculating 1-sec interpolated values" [1] "Recalculating 10-sec medians" [1] "Plotting aircraft data" [1] "Calculating inlet pressure correction" [1] "optaporat= 3.71785101135473" [1] 31 -18 0 [1] "best rsqd= 0.3349" [1] 31 -18 2 [1] "best rsqd= 0.3349" [1] 31 -18 4 [1] "best rsqd= 0.335" [1] 31 -18 6 [1] "best rsqd= 0.3355" [1] 31 -12 0 [1] "best rsqd= 0.3469" [1] 31 -12 2 [1] "best rsqd= 0.3469" [1] 31 -12 4 [1] "best rsqd= 0.3469" [1] 31 -12 6 [1] "best rsqd= 0.347" [1] "tau = RAIL" [1] "Amp = -1.6042" [1] "r^2= 0.3408" [1] "sd= 19.99" [1] "Recalculating 1-sec O2 interpolated values" [1] "Recalculating 10-sec O2 medians" [1] "Outputting data files" [1] "Plotting intervals" [1] "making html" [1] "making index html"